R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|9758255|dbj|BAB08754.1| (AB005232) transport protein particle component
Bet3p-like protein [Arabidopsis thaliana]
Length = 186
Frame 1 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | 186
0 50 100 150
Plus Strand HSPs:
Score = 673 (236.9 bits), Expect = 3.6e-65, P = 3.6e-65
Identities = 126/146 (86%), Positives = 138/146 (94%), Frame = +1
Query: 13 TYGAIVRQLLTDLEEVEEVNEQLDQMGYNIGIRLIDEFLAKSNVSRCNDFRETTDVIAKV 192
TYGAIVRQLLTDLEEVEEVN+QLDQMGYNIGIRLIDEFLAKS VSRC DF+ET ++IAKV
Sbjct: 27 TYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSGVSRCVDFKETAEMIAKV 86
Query: 193 GFKMFLGVTASVTNWDADGTCCSIVLEDNPLVDFVELPDNCQGLYYCNILSGVIRGALDM 372
GFKMFLGVTASVT+WD+DGTCCSI+LEDNPLVDFVELPD CQGLYYCN+LSGVIRGAL+M
Sbjct: 87 GFKMFLGVTASVTSWDSDGTCCSIILEDNPLVDFVELPDTCQGLYYCNVLSGVIRGALEM 146
Query: 373 VSMKTEVTWLRDVLRGDDVFEVMMCL 450
VSMKTEVTW RDVLRGDD +E+ + L
Sbjct: 147 VSMKTEVTWTRDVLRGDDAYELQVKL 172
>gi|7304929 ref|NP_038746.1| similar to yeast BET3 (S. cerevisiae) [Mus
musculus] >gi|2791806|gb|AAB96937.1| (AF041433) bet3 [Mus musculus]
Length = 180
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | 180
0 50 100 150
Plus Strand HSPs:
Score = 480 (169.0 bits), Expect = 1.0e-44, P = 1.0e-44
Identities = 90/144 (62%), Positives = 113/144 (78%), Frame = +1
Query: 13 TYGAIVRQLLTDLEEVEEVNEQLDQMGYNIGIRLIDEFLAKSNVSRCNDFRETTDVIAKV 192
TYGA+V QL D E E+VN+QLD+MGYNIG+RLI++FLA+SNV RC+DFRET DVIAKV
Sbjct: 22 TYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDFRETADVIAKV 81
Query: 193 GFKMFLGVTASVTNWDADGTCCSIVLEDNPLVDFVELPDNCQGLYYCNILSGVIRGALDM 372
FKM+LG+T S+TNW G S++LE+NPLVDFVELPDN L Y N+L GV+RGAL+M
Sbjct: 82 AFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLLCGVLRGALEM 141
Query: 373 VSMKTEVTWLRDVLRGDDVFEVMM 444
V M E +++D L+GD V E+ M
Sbjct: 142 VQMAVEAKFVQDTLKGDGVTEIRM 165
>gi|7656926 ref|NP_055223.1| similar to yeast BET3 (S. cerevisiae) [Homo
sapiens] >gi|2791804|gb|AAB96936.1| (AF041432) bet3 [Homo sapiens]
>gi|3413800|emb|CAA11902.1| (AJ224335) hBET3 protein [Homo sapiens]
>gi|9956045|gb|AAG02000.1| (AY007139) similar to Homo sapiens bet3
(BET3),mRNA with GenBank Accession Number AF041432
Length = 180
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | 180
0 50 100 150
Plus Strand HSPs:
Score = 476 (167.6 bits), Expect = 2.7e-44, P = 2.7e-44
Identities = 89/144 (61%), Positives = 113/144 (78%), Frame = +1
Query: 13 TYGAIVRQLLTDLEEVEEVNEQLDQMGYNIGIRLIDEFLAKSNVSRCNDFRETTDVIAKV 192
TYGA+V QL D E E+VN+QLD+MG+NIG+RLI++FLA+SNV RC+DFRET DVIAKV
Sbjct: 22 TYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFLARSNVGRCHDFRETADVIAKV 81
Query: 193 GFKMFLGVTASVTNWDADGTCCSIVLEDNPLVDFVELPDNCQGLYYCNILSGVIRGALDM 372
FKM+LG+T S+TNW G S++LE+NPLVDFVELPDN L Y N+L GV+RGAL+M
Sbjct: 82 AFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLLCGVLRGALEM 141
Query: 373 VSMKTEVTWLRDVLRGDDVFEVMM 444
V M E +++D L+GD V E+ M
Sbjct: 142 VQMAVEAKFVQDTLKGDGVTEIRM 165
>gi|12722658 ref|XP_001967.2| similar to yeast BET3 (S. cerevisiae) [Homo
sapiens]
Length = 192
Frame 1 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | | 192
0 50 100 150
Plus Strand HSPs:
Score = 476 (167.6 bits), Expect = 2.7e-44, P = 2.7e-44
Identities = 89/144 (61%), Positives = 113/144 (78%), Frame = +1
Query: 13 TYGAIVRQLLTDLEEVEEVNEQLDQMGYNIGIRLIDEFLAKSNVSRCNDFRETTDVIAKV 192
TYGA+V QL D E E+VN+QLD+MG+NIG+RLI++FLA+SNV RC+DFRET DVIAKV
Sbjct: 34 TYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFLARSNVGRCHDFRETADVIAKV 93
Query: 193 GFKMFLGVTASVTNWDADGTCCSIVLEDNPLVDFVELPDNCQGLYYCNILSGVIRGALDM 372
FKM+LG+T S+TNW G S++LE+NPLVDFVELPDN L Y N+L GV+RGAL+M
Sbjct: 94 AFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLLCGVLRGALEM 153
Query: 373 VSMKTEVTWLRDVLRGDDVFEVMM 444
V M E +++D L+GD V E+ M
Sbjct: 154 VQMAVEAKFVQDTLKGDGVTEIRM 177
>gi|7708597|emb|CAB90145.1| (AL355012) yeast BET3 homolog involved in targeting
and fusion of ER to Golgi transport vesicles; hydrophilic protein
that acts in conjunction with SNARE proteins [Schizosaccharomyces
pombe]
Length = 183
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | 183
0 50 100 150
Plus Strand HSPs:
Score = 395 (139.0 bits), Expect = 1.0e-35, P = 1.0e-35
Identities = 80/146 (54%), Positives = 107/146 (73%), Frame = +1
Query: 13 TYGAIVRQLLTDLEEVEEVNEQLDQMGYNIGIRLIDEFLAKSNVSRCNDFRETTDVIAKV 192
TYG+IV QL D+ E+VNE+LD+MGYNIGIRLI++FLAK+ RC DFRET + +AKV
Sbjct: 25 TYGSIVAQLCKDMN-YEKVNEELDKMGYNIGIRLIEDFLAKTEWPRCADFRETGETVAKV 83
Query: 193 GFKMFLGVTASVTNWDADGTCCSIVLEDNPLVDFVELP-DNCQGLYYCNILSGVIRGALD 369
GFK+FL + +++ DG + L+DNPL +FVELP D Q L+Y NIL GVIRGAL+
Sbjct: 84 GFKVFLNFSPIISSVSDDGNTFVLTLDDNPLAEFVELPADARQKLWYSNILCGVIRGALE 143
Query: 370 MVSMKTEVTWLRDVLRGDDVFEVMMCL 450
M+ M + +LRD+LRGD+ E+ + L
Sbjct: 144 MLQMDVDAVFLRDILRGDEHTEIRVHL 170
>gi|6322921 ref|NP_012994.1| transport protein particle (TRAPP) component;
Bet3p [Saccharomyces cerevisiae] >gi|549628|sp|P36149|YK48_YEAST
HYPOTHETICAL 22.1 KD PROTEIN IN CCP1-MET1 INTERGENIC REGION
>gi|539269|pir||S38144 hypothetical protein YKR068c - yeast
(Saccharomyces cerevisiae) >gi|486601|emb|CAA82147.1| (Z28293) ORF
YKR068c [Saccharomyces cerevisiae]
Length = 193
Frame 1 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | | 193
0 50 100 150
Plus Strand HSPs:
Score = 356 (125.3 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 68/148 (45%), Positives = 105/148 (70%), Frame = +1
Query: 13 TYGAIVRQLLTDLE-EVEEVNEQLDQMGYNIGIRLIDEFLAKSNVSRCNDFRETTDVIAK 189
TYG+IV QL D E + +VN+ L MGYNIG RLI++FLA++ + RC + +T++V++K
Sbjct: 33 TYGSIVAQLCQDYERDFNKVNDHLYSMGYNIGCRLIEDFLARTALPRCENLVKTSEVLSK 92
Query: 190 VGFKMFLGVTASVTNWDADGTCCSIVLEDNPLVDFVELP-DNCQGLYYCNILSGVIRGAL 366
FK+FL +T ++TNW + S++L++NPL DFVELP D + L+Y NIL GV++G+L
Sbjct: 93 CAFKIFLNITPNITNWSHNKDTFSLILDENPLADFVELPMDAMKSLWYSNILCGVLKGSL 152
Query: 367 DMVSMKTEVTWLRDVLRGDDVFEVMMCL 450
+MV + +V ++ D+LRGD E+ + L
Sbjct: 153 EMVQLDCDVWFVSDILRGDSQTEIKVKL 180
>gi|7294941|gb|AAF50270.1| (AE003552) CG3911 gene product [Drosophila
melanogaster]
Length = 143
Frame 1 hits (HSPs): ____________________________________________
__________________________________________________
Database sequence: | | | | 143
0 50 100
Plus Strand HSPs:
Score = 289 (101.7 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 59/134 (44%), Positives = 89/134 (66%), Frame = +1
Query: 37 LLTDLEEVEEVNEQLDQMGYNIGIRLIDEFLAKSNVSRCNDFRETTDVIAKVGFKMFLGV 216
+L D E E+VN+QL+++GYN+G+RLI++FLA+++ RC + RET D I + F+++L +
Sbjct: 1 MLRDFENAEDVNKQLERIGYNMGMRLIEDFLARTSAPRCLEMRETADRIQQA-FRIYLNI 59
Query: 217 TASVTNWDADGTCCSIVLEDNPLVDFVELPDNCQGLYYCNILSGVIRGALDMVSMKTEVT 396
+++NW S+V + NPL +FVELP + L Y ILSG IRGAL+MV
Sbjct: 60 QPTISNWSPASDEFSLVFDSNPLTEFVELPPDLTNLRYSAILSGCIRGALEMVQ------ 113
Query: 397 WLRDVLRGDDVFEV 438
L D L+GD+V E+
Sbjct: 114 -LEDQLKGDNVTEL 126
>gi|466060|sp|P34605|YO65_CAEEL HYPOTHETICAL 19.7 KD PROTEIN ZK1098.5 IN
CHROMOSOME III >gi|482165|pir||S40928 hypothetical protein ZK1098.5
- Caenorhabditis elegans >gi|3881484|emb|CAA80133.1| (Z22176) cDNA
EST yk457f1.3 comes from this gene~cDNA EST yk457f1.5 comes from
this gene [Caenorhabditis elegans]
Length = 181
Frame 1 hits (HSPs): ___________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 181
0 50 100 150
__________________
Annotated Domains:
DOMO DM06350: 1..180
PRODOM PD016734: O43617(1) O55013(1) YK48(1) 11..179
__________________
Plus Strand HSPs:
Score = 269 (94.7 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 54/127 (42%), Positives = 84/127 (66%), Frame = +1
Query: 13 TYGAIVRQLLTDLEEVEEVNEQLDQMGYNIGIRLIDEFLAKS-NVSRCNDFRETTDVIAK 189
TYGA+V ++L D E+ ++V QLD+MG+N+G RL D+FLAK+ NV RC D R+ DV+ +
Sbjct: 23 TYGAMVTEMLKDYEDPKDVTIQLDKMGFNMGTRLADDFLAKNANVPRCVDTRQIADVLCR 82
Query: 190 VGFKMFLGVTASVTNWDADGTCCSIVLEDNPLVDFVELPDNC--QGLYYCNILSGVIRGA 363
+LG++A+ ++W + +I LE NPL + V++P + GL Y +++G IRGA
Sbjct: 83 NAIPCYLGISATASSWTSGDREFTITLEANPLTELVQVPAHLVSAGLSYSQLIAGAIRGA 142
Query: 364 LDMVSMK 384
L+ V K
Sbjct: 143 LEAVHFK 149
>gi|11065727|emb|CAC14426.1| (AL121953) dJ493F7.1 (similar to murine BET3)
[Homo sapiens]
Length = 75
Frame 1 hits (HSPs): _____________________________________________
__________________________________________________
Database sequence: | | | | | 75
0 20 40 60
Plus Strand HSPs:
Score = 182 (64.1 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 36/69 (52%), Positives = 51/69 (73%), Frame = +1
Query: 13 TYGAIVRQLLTDLEEVEEVNEQLDQMGYNIGIRLIDEFLAKSNVSRCNDFRETTDVIAKV 192
TYGA+V QL D E+ E+VN+ LD+MGY IG RL+++FLA+S V RC+ + E D+IA+V
Sbjct: 8 TYGALVAQLCKDYEKDEDVNQYLDKMGYGIGTRLVEDFLARSCVGRCHSYSEIIDIIAQV 67
Query: 193 GFKMFLGVT 219
MFL ++
Sbjct: 68 --TMFLSLS 74
>gi|11282567|pir||T50333 homolog to yeast BET3 involved in targeting and fusion
of ER to Golgi transport vesicles [imported] - fission yeast
(Schizosaccharomyces pombe) >gi|7106062|emb|CAB75995.1| (AL157874)
similar to yeast BET3 involved in targeting and fusion of ER to
Golgi transport vesicles [Schizosaccharomyces pombe]
Length = 209
Frame 1 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | | 209
0 50 100 150 200
Plus Strand HSPs:
Score = 106 (37.3 bits), Expect = 0.00043, P = 0.00043
Identities = 26/120 (21%), Positives = 59/120 (49%), Frame = +1
Query: 16 YGAIVRQLLTDLEEVEEVNEQLDQMGYNIGIRLIDEFLAKS-NVSRCNDFRETTDVIAKV 192
+ +++++ + + ++E E+L++ GY +G +L++ + + N R I
Sbjct: 50 FSELIQRIQSQVSGIQEFEEKLNEHGYRVGQKLVELVVWRERNPKRETRILGILQYIHSS 109
Query: 193 GFKMFLGVTASVTNWDADGTCCSIVLEDNPLVD-FVELPDNCQGLYYCNILSGVIRGALD 369
+K G A + + +++++NPL++ F+ +P L C L+G+I G LD
Sbjct: 110 VWKYLFGKHADSLEKSKEASDEYMIVDNNPLLNKFISVPKEMNQLNCCAYLAGIIEGFLD 169
>gi|7510240|pir||T31636 hypothetical protein Y57A10A.n - Caenorhabditis elegans
>gi|5832931|emb|CAB55019.1| (AL117195) predicted using
Genefinder~cDNA EST yk27b5.5 comes from this gene [Caenorhabditis
elegans]
Length = 185
Frame 1 hits (HSPs): ________________________________
__________________________________________________
Database sequence: | | | | | 185
0 50 100 150
Plus Strand HSPs:
Score = 92 (32.4 bits), Expect = 0.058, P = 0.056
Identities = 26/117 (22%), Positives = 54/117 (46%), Frame = +1
Query: 52 EEVEEVNEQLDQMGYNIGIRLIDEF-LAKSNVSRCNDFRETTDVIAKVGFKMFLGVTASV 228
E V ++++++ G +G+R+ D L + R I +K G A
Sbjct: 40 ETVTDIHDKIASYGKQVGLRMFDIITLREKGYKRETKLLGMLMFIKSTVWKNLFGKEADK 99
Query: 229 TNWDADGTCCSIVLEDNPLVD-FVELPDNCQGLYYCNILS-GVIRGALDMVSMKTEVT 396
D C +++E +P+V+ ++ +P + +G+ C + G++ L+ S K +VT
Sbjct: 100 LERSNDDHCTYLLIEKDPMVNTYISVPRD-KGVLNCAAFAAGIVEAILESASFKCKVT 156
>gi|7303144|gb|AAF58209.1| (AE003813) CG10153 gene product [Drosophila
melanogaster]
Length = 194
Frame 1 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | 194
0 50 100 150
Plus Strand HSPs:
Score = 88 (31.0 bits), Expect = 0.23, P = 0.20
Identities = 32/129 (24%), Positives = 58/129 (44%), Frame = +1
Query: 16 YGAIVRQLLTDLEEVEEVNEQLDQMGYNIGIRLIDEFLAKSNVSRCNDFRET--TDVIAK 189
+ IV+ + + V E+ +L +G ++G R+ID + + S+ RET T ++
Sbjct: 39 FSEIVQYSQSRVFTVPELQTRLHDLGQDVGTRIIDLYFVRERSSK----RETKLTQMLLF 94
Query: 190 VG---FKMFLGVTASVTNWDADGTCCSIVLEDNPLVD-FVELPDNCQGLYYCNILSGVIR 357
V +K G A D ++E PLV+ F+ +P + L N +G++
Sbjct: 95 VKTTVWKNLFGKEAEKLEHANDDERTYYIIEKEPLVNTFISVPKDKGSLNCANFTAGIVE 154
Query: 358 GALDMVSMKTEVT 396
L +VT
Sbjct: 155 AVLTNCGFPCKVT 167
>gi|4959712|gb|AAD34459.1|AF136010_1 (AF136010) SPP30 [Solanum chacoense]
Length = 194
Frame 1 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | 194
0 50 100 150
Plus Strand HSPs:
Score = 85 (29.9 bits), Expect = 0.57, P = 0.43
Identities = 29/129 (22%), Positives = 63/129 (48%), Frame = +1
Query: 16 YGAIVRQLLTDLEEVEEVNEQLDQMGYNIGIRLIDEFLAKSNVSRCNDFRETT--DVIAK 189
+ +V+ T ++ + E+ +L+ GY +G R+++ + +R RET +++
Sbjct: 34 FSELVQYNQTQVDNITELERRLEDAGYAVGARILELLCHREKGNR----RETRLLGILSF 89
Query: 190 VG---FKMFLGVTASVTNWDADGTCCSIVLEDNPLVD-FVELPDNCQGLYYC-NILSGVI 354
V +K+ G A + ++ E LV+ F+ +P + G + C + ++G++
Sbjct: 90 VHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKD-MGAFNCGSFVAGIV 148
Query: 355 RGALDMVSMKTEVT 396
RG L+ VT
Sbjct: 149 RGVLENAGFPAVVT 162
>gi|9759528|dbj|BAB10994.1| (AB024029) gb|AAD34459.1~gene_id:K21L19.2~similar
to unknown protein [Arabidopsis thaliana]
Length = 195
Frame 1 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | 195
0 50 100 150
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 0.80, P = 0.55
Identities = 27/129 (20%), Positives = 56/129 (43%), Frame = +1
Query: 16 YGAIVRQLLTDLEEVEEVNEQLDQMGYNIGIRLIDEFLAKSNVSRCNDFR--ETTDVIAK 189
+ +V+ T ++ + E+ +L+ GY +G R++ E L + R +
Sbjct: 34 FSELVQYNQTQVDNIAELERRLEDAGYAVGSRVL-ELLCNREKGNRRETRLLGILSFVHS 92
Query: 190 VGFKMFLGVTASVTNWDADGTCCSIVLEDNPLVD-FVELPDNCQGLYYCN-ILSGVIRGA 363
+K+ G A + ++ E LV+ F+ +P + G + C ++G+++G
Sbjct: 93 TVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKD-MGTFNCGAFVAGIVKGV 151
Query: 364 LDMVSMKTEVT 396
LD VT
Sbjct: 152 LDNAGFPAVVT 162
>gi|12643598|sp||HUNB_SCAAL_1 [Segment 1 of 2] HUNCHBACK PROTEIN
>gi|2896881|gb|AAC03266.1| (U93019) hunchback protein [Scaptomyza
albovittata]
Length = 80
Frame -1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | 80
0 20 40 60
Minus Strand HSPs:
Score = 54 (19.0 bits), Expect = 1.4, Sum P(2) = 0.75
Identities = 7/11 (63%), Positives = 8/11 (72%), Frame = -1
Query: 436 PQTHHHHEVHH 404
P +HHHH HH
Sbjct: 14 PMSHHHHHSHH 24
Score = 40 (14.1 bits), Expect = 1.4, Sum P(2) = 0.75
Identities = 9/27 (33%), Positives = 12/27 (44%), Frame = -1
Query: 124 THQSIGFQYCNPFDQAAR*PPQPLPDP 44
+H S G + N A+ PLP P
Sbjct: 22 SHHSHGHHHSNSNSNASSPRQSPLPSP 48
>gi|6321628 ref|NP_011705.1| Cell wall protein; Crh1p [Saccharomyces
cerevisiae] >gi|1723734|sp|P53301|YG46_YEAST HYPOTHETICAL 52.8 KD
PROTEIN IN BUB1-HIP1 INTERGENIC REGION >gi|2132622|pir||S64507
probable membrane protein YGR189c - yeast (Saccharomyces
cerevisiae) >gi|1323336|emb|CAA97215.1| (Z72974) ORF YGR189c
[Saccharomyces cerevisiae] >gi|1430955|emb|CAA67525.1| (X99074)
G7553 [Saccharomyces cerevisiae]
Length = 507
Frame -3 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | 507
0 150 300 450
Minus Strand HSPs:
Score = 81 (28.5 bits), Expect = 9.1, P = 1.0
Identities = 45/146 (30%), Positives = 66/146 (45%), Frame = -3
Query: 437 TSNTSSPRSTSRSQVTSVFIDTISKAPLMTPLKMLQ*YKPWQLSGSSTKSTNGLSSKTIL 258
+S+ SS STS S T+ T++ + + T + K S SS+K T SS T
Sbjct: 347 SSSVSSSSSTSPSSSTATSSKTLASSSVTTSSSISSFEKQ---SSSSSKKTVA-SSSTSE 402
Query: 257 QHVPSASQLVTDAVTPRNILKPTFAITSVVSLKSLH----LETLDLAKNSSINRIP--IL 96
+ S T + T R+ + PT +SV S + + T SS +I
Sbjct: 403 SIISSTKTPATVSSTTRSTVAPTTQQSSVSSDSPVQDKGGVATSSNDVTSSTTQISSKYT 462
Query: 95 *PI*SSCSLTSSTSSRSVSN*RTIAPYVPR 6
I SS S SST+S +SN +A +PR
Sbjct: 463 STIQSSSSEASSTNSVQISNGADLAQSLPR 492
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.99
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.383 0.174 0.859
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.376 0.165 0.643
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.323 0.141 0.423
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.355 0.155 0.589
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.341 0.146 0.467
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.328 0.134 0.382
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 149 148 10. 74 3 12 22 0.091 34
30 0.11 36
+2 0 150 149 10. 74 3 12 22 0.092 34
30 0.12 36
+1 0 150 149 10. 74 3 12 22 0.092 34
30 0.12 36
-1 0 150 149 10. 74 3 12 22 0.092 34
30 0.12 36
-2 0 150 149 10. 74 3 12 22 0.092 34
30 0.12 36
-3 0 149 149 10. 74 3 12 22 0.092 34
30 0.12 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 16
No. of states in DFA: 592 (58 KB)
Total size of DFA: 189 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 141.01u 0.99s 142.00t Elapsed: 00:00:24
Total cpu time: 141.04u 1.01s 142.05t Elapsed: 00:00:24
Start: Fri Feb 1 18:31:10 2002 End: Fri Feb 1 18:31:34 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000