Ornithine decarboxylase 1 (ODC1)

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Finding cDNAs

UGID:35192 UniGene Bt.7133 Bos taurus (cow) ODC1

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Ornithine decarboxylase 1 (ODC1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_776555.1	ornithine decarboxylase 1	B. taurus	100.0	460
NP_002530.1	ornithine decarboxylase 1	H. sapiens	97.0	460
NP_038642.2	ornithine decarboxylase, structural 1	M. musculus	94.4	460
NP_001080167.1	ornithine decarboxylase 1	X. laevis	88.3	459
NP_571876.1	ornithine decarboxylase 1	D. rerio	85.8	456
XP_326764.1	hypothetical protein	N. crassa	53.1	414
NP_504752.1	Ornithine DeCarboxylase family member (odc-1)	C. elegans	52.9	378
NP_012737.1	Ornithine decarboxylase, catalyzes the first step in polyamine biosynthesis; degraded in a proteasome-dependent manner in the presence of excess polyamines; Spe1p	S. cerevisiae	50.8	388
XP_001697502.1	ornithine decarboxylase 1	C. reinhardtii	50.3	372
NP_477052.2	Ornithine decarboxylase 1 CG8721-PA	D. melanogaster	49.7	360

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	mixed; intestine; mammary gland; brain; pancreas; ovary; skin; abomasum; uncharacterized tissue; adrenal gland; cartilage; salivary gland; lymphoreticular; muscle; kidney; adipose tissue; extraembryonic tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	11
UniSTS entry:		ODC1
UniSTS entry:		(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

M92441.1	Cow ornithine decarboxylase mRNA, complete cds	P
NM_174130.2	Bos taurus ornithine decarboxylase 1 (ODC1), mRNA	P
BC146218.1	Bos taurus ornithine decarboxylase 1, mRNA (cDNA clone MGC:166337 IMAGE:8492145), complete cds	PA

EST sequences (10 of 109) [Show all sequences]

AW325369.1		mixed	5' read	P
AW345322.1		mixed	5' read
AW345328.1		mixed	5' read
AW355120.1		mixed	5' read
AW437319.1		mixed	5' read
AW447091.1		mixed	5' read
BE487854.1		mixed	5' read	P
AV591946.1	Clone E1BR021F03	brain	3' read
AV591947.1	Clone E1BR021F03	brain	5' read	P
AV597723.1	Clone E1CA033F07	cartilage	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria