R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 61 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|7485002|pir||T00825 heat shock transcription factor homolog T32G6.21 -
Arabidopsis thaliana >gi|2618703|gb|AAB84350.1| (AC002510) putative
heat shock transcription factor [Arabidopsis thaliana]
Length = 244
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | 244
0 50 100 150 200
Plus Strand HSPs:
Score = 406 (142.9 bits), Expect = 7.1e-37, P = 7.1e-37
Identities = 74/95 (77%), Positives = 81/95 (85%), Frame = +2
Query: 50 PPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLN 229
PPPFL+KTY +VEDP TD VISWN GT FVVWQP EFARDLLPTLFKH NFSSFVRQLN
Sbjct: 38 PPPFLVKTYKVVEDPTTDGVISWNEYGTGFVVWQPAEFARDLLPTLFKHCNFSSFVRQLN 97
Query: 230 TYGFRKVATSRWEFFNDKFKKGERELLHEIRRRKA 334
TYGFRKV T RWEF N+ F+KG+REL+ IRRRK+
Sbjct: 98 TYGFRKVTTIRWEFSNEMFRKGQRELMSNIRRRKS 132
>gi|12321016|gb|AAG50634.1|AC083835_19 (AC083835) heat shock transcription
factor, putative [Arabidopsis thaliana]
Length = 348
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 348
0 150 300
Plus Strand HSPs:
Score = 376 (132.4 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 69/103 (66%), Positives = 79/103 (76%), Frame = +2
Query: 23 LLECGRKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSN 202
++E K P PFL KTY LV+DPATD V+SW T FVVW+PPEFARDLLP FKH+N
Sbjct: 23 MVEGQGKAVPAPFLTKTYQLVDDPATDHVVSWGDDDTTFVVWRPPEFARDLLPNYFKHNN 82
Query: 203 FSSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
FSSFVRQLNTYGFRK+ RWEF N+ FK+GE+ LL EI RRK
Sbjct: 83 FSSFVRQLNTYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRK 125
>gi|2129832|pir||S59539 heat shock transcription factor HSF5 - soybean
>gi|671868|emb|CAA87080.1| (Z46956) heat shock transcription factor
5 [Glycine max]
Length = 370
Frame 2 hits (HSPs): ______________
Annotated Domains: _____________________________________
__________________________________________________
Database sequence: | | | | 370
0 150 300
__________________
Annotated Domains:
DOMO DM00610: HSF-TYPEDNA-BINDINGDOMAIN 13..276
Entrez domain: HSF DNA-binding domain homology 25..120
PROSITE HSF_DOMAIN: HSF-type DNA-binding domain 64..88
__________________
Plus Strand HSPs:
Score = 374 (131.7 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 67/97 (69%), Positives = 76/97 (78%), Frame = +2
Query: 41 KCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVR 220
K P PFL KTY LV+DP+TD ++SW T FVVW+PPEFARDLLP FKH+NFSSFVR
Sbjct: 19 KSVPAPFLTKTYQLVDDPSTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVR 78
Query: 221 QLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
QLNTYGFRK+ RWEF N+ FKKGE+ LL EI RRK
Sbjct: 79 QLNTYGFRKIVPDRWEFANEFFKKGEKNLLCEIHRRK 115
>gi|123684|sp|P22335|HSF2_LYCPE HEAT SHOCK FACTOR PROTEIN HSF24 (HEAT SHOCK
TRANSCRIPTION FACTOR 24) (HSTF 24) (HEAT STRESS TRANSCRIPTION
FACTOR) >gi|100267|pir||S12361 heat shock transcription factor
HSF24 - Peruvian tomato >gi|19488|emb|CAA39034.1| (X55347) heat
stress transcription factor [Lycopersicon peruvianum]
Length = 301
Frame 2 hits (HSPs): _________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | || 301
0 50 100 150 200 250 300
__________________
Annotated Domains:
BLOCKS BL00434A: HSF-type DNA-binding domain pr 29..73
BLOCKS BL00434B: HSF-type DNA-binding domain pr 79..99
BLOCKS BL00434C: HSF-type DNA-binding domain pr 155..194
DOMO DM00610: HSF-TYPEDNA-BINDINGDOMAIN 1..238
Entrez dna-binding site: BY SIMILARITY. 7..101
Entrez Domain: POLY-LYS. 255..260
PFAM HSF_DNA-bind: HSF-type DNA-binding domai 7..111
PRINTS HSFDOMAIN1: HSF domain motif I - 2 10..33
PRINTS HSFDOMAIN2: HSF domain motif II - 2 48..60
PRINTS HSFDOMAIN3: HSF domain motif III - 2 61..73
PRODOM PD001788: HSF(6) HSF1(4) HSF2(4) 7..191
PRODOM PD198471: HSF2_LYCPE 193..300
PROSITE HSF_DOMAIN: HSF-type DNA-binding domain 49..73
__________________
Plus Strand HSPs:
Score = 371 (130.6 bits), Expect = 3.6e-33, P = 3.6e-33
Identities = 67/98 (68%), Positives = 79/98 (80%), Frame = +2
Query: 38 RKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFV 217
++ P PFLLKTY LV+D ATDDVISWN GT FVVW+ EFA+DLLP FKH+NFSSFV
Sbjct: 3 QRTAPAPFLLKTYQLVDDAATDDVISWNEIGTTFVVWKTAEFAKDLLPKYFKHNNFSSFV 62
Query: 218 RQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
RQLNTYGFRK+ +WEF N+ FK+G++ELL IRRRK
Sbjct: 63 RQLNTYGFRKIVPDKWEFANENFKRGQKELLTAIRRRK 100
>gi|12643858|sp|Q9T0D3|HSF7_ARATH HEAT SHOCK FACTOR PROTEIN 7 (HSF 7) (HEAT
SHOCK TRANSCRIPTION FACTOR 7) (HSTF 7) >gi|7485003|pir||T04213 heat
shock transcription factor homolog T5C23.90 - Arabidopsis thaliana
>gi|4539457|emb|CAB39937.1| (AL049500) heat shock transcription
factor-like protein [Arabidopsis thaliana]
>gi|7267866|emb|CAB78209.1| (AL161532) heat shock transcription
factor-like protein [Arabidopsis thaliana]
Length = 377
Frame 2 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | 377
0 150 300
Plus Strand HSPs:
Score = 371 (130.6 bits), Expect = 3.6e-33, P = 3.6e-33
Identities = 67/98 (68%), Positives = 78/98 (79%), Frame = +2
Query: 38 RKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFV 217
++ P PFL KTY LVEDP D++ISWN GT F+VW+P EFARDLLP FKH+NFSSFV
Sbjct: 53 QRSIPTPFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFV 112
Query: 218 RQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
RQLNTYGFRKV RWEF ND FK+GE+ LL +I+RRK
Sbjct: 113 RQLNTYGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRK 150
>gi|6624618|emb|CAB63803.1| (AJ251868) heat shock factor 7 [Arabidopsis
thaliana]
Length = 328
Frame 2 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | 328
0 150 300
Plus Strand HSPs:
Score = 371 (130.6 bits), Expect = 3.6e-33, P = 3.6e-33
Identities = 67/98 (68%), Positives = 78/98 (79%), Frame = +2
Query: 38 RKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFV 217
++ P PFL KTY LVEDP D++ISWN GT F+VW+P EFARDLLP FKH+NFSSFV
Sbjct: 4 QRSIPTPFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFV 63
Query: 218 RQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
RQLNTYGFRKV RWEF ND FK+GE+ LL +I+RRK
Sbjct: 64 RQLNTYGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRK 101
>gi|5821136|dbj|BAA83710.1| (AB014483) heat shock factor [Nicotiana tabacum]
Length = 292
Frame 2 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | | | 292
0 50 100 150 200 250
Plus Strand HSPs:
Score = 367 (129.2 bits), Expect = 9.6e-33, P = 9.6e-33
Identities = 64/98 (65%), Positives = 78/98 (79%), Frame = +2
Query: 38 RKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFV 217
++ P PFL KTY LV+D TDDV+SWN GT FVVW+ EFA+DL+PT FKH+NFSSFV
Sbjct: 3 QRTVPAPFLTKTYQLVDDATTDDVVSWNESGTTFVVWKTAEFAKDLVPTYFKHNNFSSFV 62
Query: 218 RQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
RQLNTYGFRK+ +WEF N+ FK+G++ELL IRRRK
Sbjct: 63 RQLNTYGFRKIVPDKWEFANENFKRGQKELLTAIRRRK 100
>gi|12643794|sp|Q96320|HSF4_ARATH HEAT SHOCK FACTOR PROTEIN 4 (HSF 4) (HEAT
SHOCK TRANSCRIPTION FACTOR 4) (HSTF 4) >gi|2464881|emb|CAB16764.1|
(Z99707) heat shock transcription factor HSF4 [Arabidopsis
thaliana] >gi|3256070|emb|CAA74398.1| (Y14069) Heat Shock Factor 4
[Arabidopsis thaliana] >gi|7270648|emb|CAB80365.1| (AL161590) heat
shock transcription factor HSF4 [Arabidopsis thaliana]
Length = 284
Frame 2 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | | | 284
0 50 100 150 200 250
Plus Strand HSPs:
Score = 358 (126.0 bits), Expect = 8.7e-32, P = 8.7e-32
Identities = 63/99 (63%), Positives = 79/99 (79%), Frame = +2
Query: 38 RKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFV 217
++ P PFL KTY LV+D +TDDV+SWN +GTAFVVW+ EFA+DLLP FKH+NFSSF+
Sbjct: 8 QRSVPAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHNNFSSFI 67
Query: 218 RQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRKA 334
RQLNTYGFRK +WEF ND F++G +LL +IRRRK+
Sbjct: 68 RQLNTYGFRKTVPDKWEFANDYFRRGGEDLLTDIRRRKS 106
>gi|11386851|sp|Q9SCW4|HSF6_ARATH HEAT SHOCK FACTOR PROTEIN 6 (HSF 6) (HEAT
SHOCK TRANSCRIPTION FACTOR 6) (HSTF 6) >gi|6624616|emb|CAB63802.1|
(AJ251867) heat shock factor 6 [Arabidopsis thaliana]
>gi|10176919|dbj|BAB10163.1| (AB016880) heat shock factor 6
[Arabidopsis thaliana]
Length = 299
Frame 2 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | | | 299
0 50 100 150 200 250
Plus Strand HSPs:
Score = 357 (125.7 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 64/98 (65%), Positives = 78/98 (79%), Frame = +2
Query: 38 RKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFV 217
++ P PFL KT+ LVED + DDVISWN G++F+VW P +FA+DLLP FKH+NFSSFV
Sbjct: 17 QRSIPTPFLTKTFNLVEDSSIDDVISWNEDGSSFIVWNPTDFAKDLLPKHFKHNNFSSFV 76
Query: 218 RQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
RQLNTYGF+KV RWEF ND FK+GE+ LL EI+RRK
Sbjct: 77 RQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQRRK 114
>gi|2129612|pir||S71851 heat shock transcription factor HSF4 - Arabidopsis
thaliana >gi|1619921|gb|AAC31756.1| (U68017) heat shock
transcription factor 4 [Arabidopsis thaliana]
Length = 284
Frame 2 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | | | 284
0 50 100 150 200 250
Plus Strand HSPs:
Score = 356 (125.3 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 63/99 (63%), Positives = 78/99 (78%), Frame = +2
Query: 38 RKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFV 217
++ P PFL KTY LV+D TDDV+SWN +GTAFVVW+ EFA+DLLP FKH+NFSSF+
Sbjct: 8 QRSVPAPFLSKTYQLVDDHRTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHNNFSSFI 67
Query: 218 RQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRKA 334
RQLNTYGFRK +WEF ND F++G +LL +IRRRK+
Sbjct: 68 RQLNTYGFRKTVPDKWEFANDYFRRGGEDLLTDIRRRKS 106
>gi|429155|emb|CAA53761.1| (X76167) heat shock factor [Arabidopsis thaliana]
Length = 483
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | 483
0 150 300 450
Plus Strand HSPs:
Score = 354 (124.6 bits), Expect = 2.3e-31, P = 2.3e-31
Identities = 62/95 (65%), Positives = 76/95 (80%), Frame = +2
Query: 50 PPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLN 229
PPPFL KTY +VEDPATD ++SW+ +F+VW PPEF+RDLLP FKH+NFSSFVRQLN
Sbjct: 50 PPPFLSKTYDMVEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLN 109
Query: 230 TYGFRKVATSRWEFFNDKFKKGERELLHEIRRRKA 334
TYGFRKV RWEF N+ F +G++ LL +I RRK+
Sbjct: 110 TYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRKS 144
>gi|12644262|sp|P41151|HSF1_ARATH HEAT SHOCK FACTOR PROTEIN 1 (HSF 1) (HEAT
SHOCK TRANSCRIPTION FACTOR 1) (HSTF 1) >gi|7428781|pir||S52641 heat
shock transcription factor HSF1 - Arabidopsis thaliana
>gi|2245134|emb|CAB10555.1| (Z97344) heat shock transcription
factor HSF1 [Arabidopsis thaliana] >gi|7268528|emb|CAB78778.1|
(AL161547) heat shock transcription factor HSF1 [Arabidopsis
thaliana]
Length = 495
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 495
0 150 300 450
Plus Strand HSPs:
Score = 354 (124.6 bits), Expect = 2.3e-31, P = 2.3e-31
Identities = 62/95 (65%), Positives = 76/95 (80%), Frame = +2
Query: 50 PPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLN 229
PPPFL KTY +VEDPATD ++SW+ +F+VW PPEF+RDLLP FKH+NFSSFVRQLN
Sbjct: 50 PPPFLSKTYDMVEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLN 109
Query: 230 TYGFRKVATSRWEFFNDKFKKGERELLHEIRRRKA 334
TYGFRKV RWEF N+ F +G++ LL +I RRK+
Sbjct: 110 TYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRKS 144
>gi|2129831|pir||S59538 heat shock transcription factor HSF34 - soybean
>gi|662930|emb|CAA87077.1| (Z46953) heat shock transcription factor
34 [Glycine max]
Length = 282
Frame 2 hits (HSPs): __________________
Annotated Domains: __________________
__________________________________________________
Database sequence: | | | | | | | 282
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez domain: HSF DNA-binding domain homology 10..105
PROSITE HSF_DOMAIN: HSF-type DNA-binding domain 49..73
__________________
Plus Strand HSPs:
Score = 350 (123.2 bits), Expect = 6.1e-31, P = 6.1e-31
Identities = 62/98 (63%), Positives = 75/98 (76%), Frame = +2
Query: 38 RKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFV 217
++ P PFL KTY LVED TD VISW G FVVW+ +FA+DLLP FKH+NFSSFV
Sbjct: 3 QRSVPAPFLTKTYQLVEDQGTDQVISWGESGNTFVVWKHADFAKDLLPKYFKHNNFSSFV 62
Query: 218 RQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
RQLNTYGFRK+ +WEF N+ FK+G++ELL EI+RRK
Sbjct: 63 RQLNTYGFRKIVPDKWEFANEHFKRGQKELLSEIKRRK 100
>gi|11386827|sp|Q40152|HSF8_LYCES HEAT SHOCK FACTOR PROTEIN HSF8 (HEAT SHOCK
TRANSCRIPTION FACTOR 8) (HSTF 8) (HEAT STRESS TRANSCRIPTION FACTOR)
>gi|100225|pir||S25478 heat shock transcription factor HSF8 -
tomato >gi|19260|emb|CAA47868.1| (X67599) heat stress transcription
factor 8 [Lycopersicon esculentum]
Length = 527
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | 527
0 150 300 450
Plus Strand HSPs:
Score = 351 (123.6 bits), Expect = 7.3e-31, P = 7.3e-31
Identities = 61/94 (64%), Positives = 75/94 (79%), Frame = +2
Query: 50 PPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLN 229
PPPFL+KTY +V+DP+TD ++SW+ +FVVW PPEFA+DLLP FKH+NFSSFVRQLN
Sbjct: 37 PPPFLVKTYDMVDDPSTDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLN 96
Query: 230 TYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
TYGFRKV RWEF N+ F +G++ LL I RRK
Sbjct: 97 TYGFRKVDPDRWEFANEGFLRGQKHLLKSISRRK 130
>gi|729775|sp|P41153|HSF8_LYCPE HEAT SHOCK FACTOR PROTEIN HSF8 (HEAT SHOCK
TRANSCRIPTION FACTOR 8) (HSTF 8) (HEAT STRESS TRANSCRIPTION FACTOR)
>gi|100264|pir||S25481 heat shock transcription factor HSF8 -
Peruvian tomato >gi|19492|emb|CAA47869.1| (X67600) heat shock
transcription factor 8 [Lycopersicon peruvianum]
Length = 527
Frame 2 hits (HSPs): __________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 527
0 150 300 450
__________________
Annotated Domains:
BLOCKS BL00434A: HSF-type DNA-binding domain pr 61..105
BLOCKS BL00434B: HSF-type DNA-binding domain pr 111..131
BLOCKS BL00434C: HSF-type DNA-binding domain pr 172..211
DOMO DM00610: HSF-TYPEDNA-BINDINGDOMAIN 30..270
DOMO DM07476: HSF-TYPEDNA-BINDINGDOMAIN 272..484
Entrez dna-binding site: BY SIMILARITY. 39..133
Entrez Domain: POLY-GLY. 14..20
Entrez Domain: POLY-GLN. 139..143
Entrez Domain: POLY-GLN. 195..198
PFAM HSF_DNA-bind: HSF-type DNA-binding domai 40..225
PRINTS HSFDOMAIN1: HSF domain motif I - 2 42..65
PRINTS HSFDOMAIN2: HSF domain motif II - 2 80..92
PRINTS HSFDOMAIN3: HSF domain motif III - 2 93..105
PRODOM PD192036: HSF8_LYCPE 22..40
PRODOM PD001788: HSF(6) HSF1(4) HSF2(4) 42..216
PRODOM PD008471: HSF1(1) O23615(1) HSF8(1) 218..361
PRODOM PD036954: HSF8(1) Q40152(1) 363..526
PROSITE HSF_DOMAIN: HSF-type DNA-binding domain 81..105
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 172..193
__________________
Plus Strand HSPs:
Score = 351 (123.6 bits), Expect = 7.3e-31, P = 7.3e-31
Identities = 61/94 (64%), Positives = 75/94 (79%), Frame = +2
Query: 50 PPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLN 229
PPPFL+KTY +V+DP+TD ++SW+ +FVVW PPEFA+DLLP FKH+NFSSFVRQLN
Sbjct: 39 PPPFLVKTYDMVDDPSTDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLN 98
Query: 230 TYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
TYGFRKV RWEF N+ F +G++ LL I RRK
Sbjct: 99 TYGFRKVDPDRWEFANEGFLRGQKHLLKSISRRK 132
>gi|8920606|gb|AAF81328.1|AC007767_8 (AC007767) Strong similarity to heat shock
factor protein HSF from Lycopersicon peruvianum gb|X67600. It
contains a HSF-type DNA-binding domain PF|00447. EST gb|N38285
comes from this gene. [Arabidopsis thaliana]
>gi|12597867|gb|AAG60176.1|AC084110_9 (AC084110) heat shock
transcription factor HSF8, putative [Arabidopsis thaliana]
Length = 482
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 482
0 150 300 450
Plus Strand HSPs:
Score = 345 (121.4 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 61/94 (64%), Positives = 74/94 (78%), Frame = +2
Query: 50 PPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLN 229
PPPFL KTY +V+D TD ++SW+A +F+VW+PPEFARDLLP FKH+NFSSFVRQLN
Sbjct: 35 PPPFLSKTYDMVDDHNTDSIVSWSANNNSFIVWKPPEFARDLLPKNFKHNNFSSFVRQLN 94
Query: 230 TYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
TYGFRKV RWEF N+ F +G++ LL I RRK
Sbjct: 95 TYGFRKVDPDRWEFANEGFLRGQKHLLQSITRRK 128
>gi|5821138|dbj|BAA83711.1| (AB014484) heat shock factor [Nicotiana tabacum]
Length = 408
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | 408
0 150 300
Plus Strand HSPs:
Score = 329 (115.8 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 58/94 (61%), Positives = 73/94 (77%), Frame = +2
Query: 53 PPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNT 232
PPFL KTY +V+DP++D ++SW++ +FVVW PP+FARDLLP FKH+NFSSF+RQLNT
Sbjct: 12 PPFLTKTYEMVDDPSSDAIVSWSSSNKSFVVWNPPDFARDLLPRYFKHNNFSSFIRQLNT 71
Query: 233 YGFRKVATSRWEFFN-DKFKKGERELLHEIRRRK 331
YGFRKV +WEF N D F +G+ LL I RRK
Sbjct: 72 YGFRKVDPEKWEFANEDNFFRGQPHLLKNIHRRK 105
>gi|6728962|gb|AAF26960.1|AC018363_5 (AC018363) putative heat shock
transcription factor [Arabidopsis thaliana]
Length = 468
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 468
0 150 300 450
Plus Strand HSPs:
Score = 327 (115.1 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 58/93 (62%), Positives = 72/93 (77%), Frame = +2
Query: 53 PPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNT 232
PPFL KTY +V+DP TDDV+SW++ +FVVW PEFA+ LP FKH+NFSSFVRQLNT
Sbjct: 22 PPFLSKTYDMVDDPLTDDVVSWSSGNNSFVVWNVPEFAKQFLPKYFKHNNFSSFVRQLNT 81
Query: 233 YGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
YGFRKV RWEF N+ F +G++++L I RRK
Sbjct: 82 YGFRKVDPDRWEFANEGFLRGQKQILKSIVRRK 114
>gi|8347238|gb|AAF74563.1|AF208544_1 (AF208544) heat stress transcription
factor A3 [Lycopersicon peruvianum]
Length = 508
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 508
0 150 300 450
Plus Strand HSPs:
Score = 329 (115.8 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 61/103 (59%), Positives = 74/103 (71%), Frame = +2
Query: 26 LECGRKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNF 205
+EC PPFL KT+ LVEDP D +ISW G +FVVW P EF+R +LP FKHSNF
Sbjct: 86 MECLHGIQIPPFLSKTFDLVEDPLLDTIISWGTNGESFVVWDPVEFSRLVLPRNFKHSNF 145
Query: 206 SSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRKA 334
SSFVRQLNTYGFRK+ RWEF N+ F +G+R LL I+RR++
Sbjct: 146 SSFVRQLNTYGFRKIDADRWEFANEGFSRGKRHLLKNIQRRRS 188
>gi|7485000|pir||T05025 heat shock transcription factor homolog F13C5.50 -
Arabidopsis thaliana >gi|2832616|emb|CAA16745.1| (AL021711) heat
shock transcription factor-like protein [Arabidopsis thaliana]
>gi|7268682|emb|CAB78890.1| (AL161549) heat shock transcription
factor-like protein [Arabidopsis thaliana]
Length = 401
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 401
0 150 300
Plus Strand HSPs:
Score = 323 (113.7 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 54/93 (58%), Positives = 70/93 (75%), Frame = +2
Query: 53 PPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNT 232
PPFL KTY +V+D ++D ++SW+ +F+VW PPEF+RDLLP FKH+NFSSF+RQLNT
Sbjct: 14 PPFLTKTYEMVDDSSSDSIVSWSQSNKSFIVWNPPEFSRDLLPRFFKHNNFSSFIRQLNT 73
Query: 233 YGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
YGFRK +WEF ND F +G+ L+ I RRK
Sbjct: 74 YGFRKADPEQWEFANDDFVRGQPHLMKNIHRRK 106
>gi|3399765|gb|AAC31792.1| (U68561) heat shock transcription factor 21
[Arabidopsis thaliana]
Length = 401
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 401
0 150 300
Plus Strand HSPs:
Score = 323 (113.7 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 54/93 (58%), Positives = 70/93 (75%), Frame = +2
Query: 53 PPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNT 232
PPFL KTY +V+D ++D ++SW+ +F+VW PPEF+RDLLP FKH+NFSSF+RQLNT
Sbjct: 14 PPFLTKTYEMVDDSSSDSIVSWSQSNKSFIVWNPPEFSRDLLPRFFKHNNFSSFIRQLNT 73
Query: 233 YGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
YGFRK +WEF ND F +G+ L+ I RRK
Sbjct: 74 YGFRKADPEQWEFANDDFVRGQPHLMKNIHRRK 106
>gi|11277183|pir||T49070 probable heat shock transcription factor - Arabidopsis
thaliana >gi|4678920|emb|CAB41311.1| (AL049711) putative heat shock
transcription factor [Arabidopsis thaliana]
Length = 272
Frame 2 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | | | 272
0 50 100 150 200 250
Plus Strand HSPs:
Score = 322 (113.3 bits), Expect = 5.7e-28, P = 5.7e-28
Identities = 57/93 (61%), Positives = 71/93 (76%), Frame = +2
Query: 50 PPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLN 229
PPPFL KT+ +V+DP TD ++SWN GT+FVVW F+ LLP FKHSNFSSF+RQLN
Sbjct: 27 PPPFLTKTFEMVDDPNTDHIVSWNRGGTSFVVWDLHSFSTILLPRHFKHSNFSSFIRQLN 86
Query: 230 TYGFRKVATSRWEFFNDKFKKGERELLHEIRRR 328
TYGFRK+ RWEF N++F G+R+LL I+RR
Sbjct: 87 TYGFRKIEAERWEFANEEFLLGQRQLLKNIKRR 119
>gi|11386852|sp|Q9SCW5|HSF2_ARATH HEAT SHOCK FACTOR PROTEIN 2 (HSF 2) (HEAT
SHOCK TRANSCRIPTION FACTOR 2) (HSTF 2) >gi|6624612|emb|CAB63800.1|
(AJ251865) heat shock factor 2 [Arabidopsis thaliana]
Length = 468
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 468
0 150 300 450
Plus Strand HSPs:
Score = 322 (113.3 bits), Expect = 5.7e-28, P = 5.7e-28
Identities = 57/93 (61%), Positives = 71/93 (76%), Frame = +2
Query: 53 PPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNT 232
PPFL KTY +V+DP TDDV+SW++ +FVVW PEFA+ LP F H+NFSSFVRQLNT
Sbjct: 22 PPFLSKTYDMVDDPLTDDVVSWSSGNNSFVVWNVPEFAKQFLPKYFNHNNFSSFVRQLNT 81
Query: 233 YGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
YGFRKV RWEF N+ F +G++++L I RRK
Sbjct: 82 YGFRKVDPDRWEFANEGFLRGQKQILKSIVRRK 114
>gi|9279701|dbj|BAB01258.1| (AB022223) heat shock transcription factor-like
protein [Arabidopsis thaliana]
Length = 406
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 406
0 150 300
Plus Strand HSPs:
Score = 321 (113.0 bits), Expect = 7.2e-28, P = 7.2e-28
Identities = 62/105 (59%), Positives = 74/105 (70%), Frame = +2
Query: 17 KGLLECGRKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKH 196
+GL E G PPPFL KTY LVED T+ V+SW+ +F+VW P F+ LLP FKH
Sbjct: 52 EGLHESG----PPPFLTKTYDLVEDSRTNHVVSWSKSNNSFIVWDPQAFSVTLLPRFFKH 107
Query: 197 SNFSSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
+NFSSFVRQLNTYGFRKV RWEF N+ F +G++ LL IRRRK
Sbjct: 108 NNFSSFVRQLNTYGFRKVNPDRWEFANEGFLRGQKHLLKNIRRRK 152
>gi|2130133|pir||S61458 heat shock transcription factor (clone hsfa) - maize
(fragment)
Length = 94
Frame 2 hits (HSPs): __________________________________________________
Annotated Domains: ______________
__________________________________________________
Database sequence: | | | | | | 94
0 20 40 60 80
__________________
Annotated Domains:
PROSITE HSF_DOMAIN: HSF-type DNA-binding domain 43..67
__________________
Plus Strand HSPs:
Score = 320 (112.6 bits), Expect = 9.2e-28, P = 9.2e-28
Identities = 59/93 (63%), Positives = 70/93 (75%), Frame = +2
Query: 53 PPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNT 232
PPFL KTY +V+DP T+ V+SW+A +FVVW P F LLP FKH+NFSSFVRQLNT
Sbjct: 2 PPFLTKTYDMVDDPTTNAVVSWSAANNSFVVWDPHIFGTVLLPRYFKHNNFSSFVRQLNT 61
Query: 233 YGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
YGFRKV RWEF N++F +G+R LL IRRRK
Sbjct: 62 YGFRKVDPDRWEFANEEFLRGQRHLLKNIRRRK 94
>gi|7485001|pir||T02609 heat shock transcription factor homolog T19L18.4 -
Arabidopsis thaliana >gi|3413699|gb|AAC31222.1| (AC004747) putative
heat shock transcription factor [Arabidopsis thaliana]
Length = 345
Frame 2 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | 345
0 150 300
Plus Strand HSPs:
Score = 320 (112.6 bits), Expect = 9.2e-28, P = 9.2e-28
Identities = 61/105 (58%), Positives = 75/105 (71%), Frame = +2
Query: 17 KGLLECGRKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKH 196
+GL E G PPPFL KTY +VEDPATD V+SW+ +FVVW +F+ LLP FKH
Sbjct: 35 EGLNETG----PPPFLTKTYEMVEDPATDTVVSWSNGRNSFVVWDSHKFSTTLLPRYFKH 90
Query: 197 SNFSSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
SNFSSF+RQLNTYGFRK+ RWEF N+ F G++ LL I+RR+
Sbjct: 91 SNFSSFIRQLNTYGFRKIDPDRWEFANEGFLAGQKHLLKNIKRRR 135
>gi|11357326|pir||T48399 heat shock transcription factor-like protein -
Arabidopsis thaliana >gi|7340657|emb|CAB82937.1| (AL162506) heat
shock transcription factor-like protein [Arabidopsis thaliana]
Length = 476
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 476
0 150 300 450
Plus Strand HSPs:
Score = 320 (112.6 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 58/94 (61%), Positives = 71/94 (75%), Frame = +2
Query: 53 PPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNT 232
PPFL KT+ LV+DP D VISW G +FVVW P EFAR +LP FKH+NFSSFVRQLNT
Sbjct: 118 PPFLSKTFDLVDDPTLDPVISWGLTGASFVVWDPLEFARIILPRNFKHNNFSSFVRQLNT 177
Query: 233 YGFRKVATSRWEFFNDKFKKGERELLHEIRRRKA 334
YGFRK+ T +WEF N+ F +G++ LL I RR++
Sbjct: 178 YGFRKIDTDKWEFANEAFLRGKKHLLKNIHRRRS 211
>gi|7158882|gb|AAF37579.1|AF235958_1 (AF235958) heat shock transcription factor
[Medicago sativa]
Length = 402
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 402
0 150 300
Plus Strand HSPs:
Score = 319 (112.3 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 57/101 (56%), Positives = 73/101 (72%), Frame = +2
Query: 29 ECGRKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFS 208
E G + PPFL KTY +V+D ++D ++SW+A +FVVW PPEFAR LL + KH+NFS
Sbjct: 3 EAGSSSSLPPFLAKTYEMVDDRSSDPIVSWSASNKSFVVWNPPEFARVLLSEILKHNNFS 62
Query: 209 SFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
SF+RQLNTYGFRKV +WEF ND F +G+ L+ I RRK
Sbjct: 63 SFIRQLNTYGFRKVDPEQWEFANDDFIRGQPHLMKNIHRRK 103
>gi|10177954|dbj|BAB11313.1| (AB026651) heat shock transcription factor-like
protein [Arabidopsis thaliana]
Length = 251
Frame 2 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | || 251
0 50 100 150 200 250
Plus Strand HSPs:
Score = 319 (112.3 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 59/100 (59%), Positives = 74/100 (74%), Frame = +2
Query: 35 GRKCTPPP-FLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSS 211
G K TPP FL KTY +VED +T++++SW+ +F+VW+P FA LP FKH+NFSS
Sbjct: 11 GLKETPPTAFLTKTYNIVEDSSTNNIVSWSRDNNSFIVWEPETFALICLPRCFKHNNFSS 70
Query: 212 FVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
FVRQLNTYGF+K+ T RWEF N+ F KGER LL I+RRK
Sbjct: 71 FVRQLNTYGFKKIDTERWEFANEHFLKGERHLLKNIKRRK 110
>gi|12643648|sp|O81821|HSF3_ARATH HEAT SHOCK FACTOR PROTEIN 3 (HSF 3) (HEAT
SHOCK TRANSCRIPTION FACTOR 3) (HSTF 3)
Length = 481
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 481
0 150 300 450
Plus Strand HSPs:
Score = 317 (111.6 bits), Expect = 2.9e-27, P = 2.9e-27
Identities = 57/93 (61%), Positives = 72/93 (77%), Frame = +2
Query: 53 PPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNT 232
PPFL KTY +V+DP T++V+SW++ +FVVW PEF++ LLP FKH+NFSSFVRQLNT
Sbjct: 26 PPFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQLNT 85
Query: 233 YGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
YGFRKV RWEF N+ F +G ++LL I RRK
Sbjct: 86 YGFRKVDPDRWEFANEGFLRGRKQLLKSIVRRK 118
>gi|11277182|pir||T48124 heat shock transcription factor-like protein -
Arabidopsis thaliana >gi|7523417|emb|CAB86436.1| (AL138648) heat
shock transcription factor-like protein [Arabidopsis thaliana]
Length = 282
Frame 2 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | | | 282
0 50 100 150 200 250
Plus Strand HSPs:
Score = 314 (110.5 bits), Expect = 4.0e-27, P = 4.0e-27
Identities = 58/104 (55%), Positives = 73/104 (70%), Frame = +2
Query: 17 KGLLECGRKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKH 196
+GL E G P PFL KT+ +V DP T+ ++SWN G +FVVW P F+ +LP FKH
Sbjct: 19 EGLQEAG----PSPFLTKTFEMVGDPNTNHIVSWNRGGISFVVWDPHSFSATILPLYFKH 74
Query: 197 SNFSSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRR 328
+NFSSFVRQLNTYGFRK+ RWEF N+ F G+R+LL I+RR
Sbjct: 75 NNFSSFVRQLNTYGFRKIEAERWEFMNEGFLMGQRDLLKSIKRR 118
>gi|3256068|emb|CAA74397.1| (Y14068) Heat Shock Factor 3 [Arabidopsis thaliana]
Length = 520
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | 520
0 150 300 450
Plus Strand HSPs:
Score = 317 (111.6 bits), Expect = 5.2e-27, P = 5.2e-27
Identities = 57/93 (61%), Positives = 72/93 (77%), Frame = +2
Query: 53 PPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNT 232
PPFL KTY +V+DP T++V+SW++ +FVVW PEF++ LLP FKH+NFSSFVRQLNT
Sbjct: 65 PPFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQLNT 124
Query: 233 YGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
YGFRKV RWEF N+ F +G ++LL I RRK
Sbjct: 125 YGFRKVDPDRWEFANEGFLRGRKQLLKSIVRRK 157
>gi|7488121|pir||G71400 probable heat shock transcription factor - Arabidopsis
thaliana >gi|2244754|emb|CAB10177.1| (Z97335) heat shock
transcription factor like protein [Arabidopsis thaliana]
>gi|7268102|emb|CAB78440.1| (AL161537) heat shock transcription
factor like protein [Arabidopsis thaliana]
Length = 834
Frame 2 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | 834
0 150 300 450 600 750
Plus Strand HSPs:
Score = 322 (113.3 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 56/94 (59%), Positives = 71/94 (75%), Frame = +2
Query: 50 PPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLN 229
P PFL+KTY +V+D +TD ++SW+A +F+VW EF+R LLPT FKH+NFSSF+RQLN
Sbjct: 389 PAPFLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFSRLLLPTYFKHNNFSSFIRQLN 448
Query: 230 TYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
TYGFRK+ RWEF ND F K ++ LL I RRK
Sbjct: 449 TYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRK 482
>gi|729774|sp|P41152|HSF3_LYCPE HEAT SHOCK FACTOR PROTEIN HSF30 (HEAT SHOCK
TRANSCRIPTION FACTOR 30) (HSTF 30) (HEAT STRESS TRANSCRIPTION
FACTOR) >gi|100265|pir||S25480 heat shock transcription factor
HSF30 - Peruvian tomato >gi|19490|emb|CAA47870.1| (X67601) heat
stress transcription factor HSF30 [Lycopersicon peruvianum]
Length = 351
Frame 2 hits (HSPs): _______________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 351
0 150 300
__________________
Annotated Domains:
BLOCKS BL00434A: HSF-type DNA-binding domain pr 51..95
BLOCKS BL00434B: HSF-type DNA-binding domain pr 101..121
BLOCKS BL00434C: HSF-type DNA-binding domain pr 144..183
DOMO DM00610: HSF-TYPEDNA-BINDINGDOMAIN 20..244
Entrez dna-binding site: BY SIMILARITY. 29..123
Entrez Domain: POLY-GLN. 167..170
Entrez Domain: POLY-VAL. 315..318
PFAM HSF_DNA-bind: HSF-type DNA-binding domai 30..197
PRINTS HSFDOMAIN1: HSF domain motif I - 2 32..55
PRINTS HSFDOMAIN2: HSF domain motif II - 2 70..82
PRINTS HSFDOMAIN3: HSF domain motif III - 2 83..95
PRODOM PD078388: HSF3_LYCPE 1..30
PRODOM PD001788: HSF(6) HSF1(4) HSF2(4) 32..174
PRODOM PD108722: HSF3(1) O80982(1) 176..350
PROSITE HSF_DOMAIN: HSF-type DNA-binding domain 71..95
__________________
Plus Strand HSPs:
Score = 309 (108.8 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 56/94 (59%), Positives = 69/94 (73%), Frame = +2
Query: 50 PPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLN 229
PPPFL KTY +VED +TD VISW+ +F+VW +F+ LLP FKHSNFSSF+RQLN
Sbjct: 29 PPPFLSKTYEMVEDSSTDQVISWSTTRNSFIVWDSHKFSTTLLPRFFKHSNFSSFIRQLN 88
Query: 230 TYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
TYGFRKV RWEF N+ F G++ LL I+RR+
Sbjct: 89 TYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRR 122
>gi|1362193|pir||S57633 heat shock factor - maize >gi|2130134|pir||S61448 heat
shock transcription factor (clone hsfb) - maize
>gi|886742|emb|CAA58117.1| (X82943) heat shock factor [Zea mays]
Length = 308
Frame 2 hits (HSPs): ________________
Annotated Domains: ___________________________________
__________________________________________________
Database sequence: | | | | | | | | 308
0 50 100 150 200 250 300
__________________
Annotated Domains:
DOMO DM00610: HSF-TYPEDNA-BINDINGDOMAIN 1..215
Entrez domain: HSF DNA-binding domain homology 10..105
PROSITE HSF_DOMAIN: HSF-type DNA-binding domain 49..73
__________________
Plus Strand HSPs:
Score = 307 (108.1 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 57/93 (61%), Positives = 69/93 (74%), Frame = +2
Query: 53 PPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNT 232
PPFL KTY +V+DPATD V++W GT+FVV EF RDLLP FKH+NFSSFVRQLNT
Sbjct: 8 PPFLSKTYEMVDDPATDAVVAWTPLGTSFVVANQAEFWRDLLPKYFKHNNFSSFVRQLNT 67
Query: 233 YGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
YGF+K+ +WEF ND F +G++ L I RRK
Sbjct: 68 YGFKKIDPEQWEFANDDFIRGQQHRLKNIHRRK 100
>gi|9758674|dbj|BAB09213.1| (AB012245) heat shock transcription factor
[Arabidopsis thaliana]
Length = 345
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 345
0 150 300
Plus Strand HSPs:
Score = 302 (106.3 bits), Expect = 7.4e-26, P = 7.4e-26
Identities = 54/99 (54%), Positives = 69/99 (69%), Frame = +2
Query: 35 GRKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSF 214
G + PPFL KTY +V+D ++D V++W+ +F+V P EF+RDLLP FKH NFSSF
Sbjct: 6 GGSSSLPPFLTKTYEMVDDSSSDSVVAWSENNKSFIVKNPAEFSRDLLPRFFKHKNFSSF 65
Query: 215 VRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
+RQLNTYGFRKV +WEF ND F +G L+ I RRK
Sbjct: 66 IRQLNTYGFRKVDPEKWEFLNDDFVRGRPYLMKNIHRRK 104
>gi|662924|emb|CAA87076.1| (Z46952) heat shock transcription factor 21 [Glycine
max]
Length = 193
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | 193
0 50 100 150
Plus Strand HSPs:
Score = 298 (104.9 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 56/105 (53%), Positives = 72/105 (68%), Frame = +2
Query: 17 KGLLECGRKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKH 196
+GL E G PPPFL K + +VED +TD ++SW+ +FVVW +F+ D+LP FKH
Sbjct: 36 EGLHEVG----PPPFLSKIFDMVEDSSTDSIVSWSMARNSFVVWDSHKFSADILPRYFKH 91
Query: 197 SNFSSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
NFSSF+RQLN YGFRKV RWEF N+ F G+R LL I+RR+
Sbjct: 92 GNFSSFIRQLNAYGFRKVDPDRWEFANEGFLAGQRHLLKTIKRRR 136
>gi|2129828|pir||S59537 heat shock transcription factor HSF21 - soybean
(fragment)
Length = 192
Frame 2 hits (HSPs): ___________________________
Annotated Domains: __________________________ ______
__________________________________________________
Database sequence: | | | | | 192
0 50 100 150
__________________
Annotated Domains:
Entrez domain: HSF DNA-binding domain homology 46..141
PROSITE HSF_DOMAIN: HSF-type DNA-binding domain 85..109
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 159..180
__________________
Plus Strand HSPs:
Score = 298 (104.9 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 56/105 (53%), Positives = 72/105 (68%), Frame = +2
Query: 17 KGLLECGRKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKH 196
+GL E G PPPFL K + +VED +TD ++SW+ +FVVW +F+ D+LP FKH
Sbjct: 36 EGLHEVG----PPPFLSKIFDMVEDSSTDSIVSWSMARNSFVVWDSHKFSADILPRYFKH 91
Query: 197 SNFSSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
NFSSF+RQLN YGFRKV RWEF N+ F G+R LL I+RR+
Sbjct: 92 GNFSSFIRQLNAYGFRKVDPDRWEFANEGFLAGQRHLLKTIKRRR 136
>gi|7488808|pir||T06534 heat shock transcription factor A - garden pea
(fragment) >gi|3550552|emb|CAA09301.1| (AJ010644) heat shock
transcription factor (HSFA) [Pisum sativum]
Length = 95
Frame 2 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | | | 95
0 20 40 60 80
Plus Strand HSPs:
Score = 293 (103.1 bits), Expect = 6.7e-25, P = 6.7e-25
Identities = 57/98 (58%), Positives = 70/98 (71%), Frame = +2
Query: 17 KGLLECGRKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKH 196
+GL E G PPPFL KT+ +VEDP+TD ++SW+ +FVVW +F+ +LP FKH
Sbjct: 2 EGLHETG----PPPFLTKTFDVVEDPSTDGIVSWSRARNSFVVWDLSKFSTAILPRYFKH 57
Query: 197 SNFSSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELL 310
SNFSSFVRQLNTYGFRKV RWEF N+ F G+R LL
Sbjct: 58 SNFSSFVRQLNTYGFRKVDPDRWEFANEGFLAGQRILL 95
>gi|9294046|dbj|BAB02003.1| (AB020746) contains similarity to heat shock
transcription factor~gene_id:MOB24.9 [Arabidopsis thaliana]
Length = 330
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 330
0 150 300
Plus Strand HSPs:
Score = 288 (101.4 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 51/92 (55%), Positives = 69/92 (75%), Frame = +2
Query: 56 PFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTY 235
PF++KTY +V DP+TD +I+W +F+V P +F++ +LP FKH+NFSSFVRQLNTY
Sbjct: 17 PFIVKTYQMVNDPSTDWLITWGPAHNSFIVVDPLDFSQRILPAYFKHNNFSSFVRQLNTY 76
Query: 236 GFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
GFRKV RWEF N+ F +G++ LL+ I RRK
Sbjct: 77 GFRKVDPDRWEFANEHFLRGQKHLLNNIARRK 108
>gi|8809578|dbj|BAA97129.1| (AB018115) contains similarity to heat shock
transcription factor~gene_id:MJP23.4 [Arabidopsis thaliana]
Length = 331
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 331
0 150 300
Plus Strand HSPs:
Score = 279 (98.2 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 48/91 (52%), Positives = 67/91 (73%), Frame = +2
Query: 56 PFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTY 235
PFL KT+ +V+D TD V+SW+ +F++W EF+ +LLP FKH NFSSF+RQLN+Y
Sbjct: 71 PFLRKTFEIVDDKVTDPVVSWSPTRKSFIIWDSYEFSENLLPKYFKHKNFSSFIRQLNSY 130
Query: 236 GFRKVATSRWEFFNDKFKKGERELLHEIRRR 328
GF+KV + RWEF N+ F+ G++ LL I+RR
Sbjct: 131 GFKKVDSDRWEFANEGFQGGKKHLLKNIKRR 161
>gi|11357325|pir||T51514 Heat Shock Factor 3 - Arabidopsis thaliana
>gi|9755734|emb|CAC01846.1| (AL391147) Heat Shock Factor 3
[Arabidopsis thaliana]
Length = 447
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 447
0 150 300
Plus Strand HSPs:
Score = 281 (98.9 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 50/84 (59%), Positives = 65/84 (77%), Frame = +2
Query: 80 LVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATS 259
+V+DP T++V+SW++ +FVVW PEF++ LLP FKH+NFSSFVRQLNTYGFRKV
Sbjct: 1 MVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQLNTYGFRKVDPD 60
Query: 260 RWEFFNDKFKKGERELLHEIRRRK 331
RWEF N+ F +G ++LL I RRK
Sbjct: 61 RWEFANEGFLRGRKQLLKSIVRRK 84
>gi|2130135|pir||S61459 heat shock transcription factor (clone hsfc) - maize
(fragment)
Length = 94
Frame 2 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | | | 94
0 20 40 60 80
Plus Strand HSPs:
Score = 275 (96.8 bits), Expect = 5.4e-23, P = 5.4e-23
Identities = 51/92 (55%), Positives = 66/92 (71%), Frame = +2
Query: 56 PFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTY 235
PFL K Y +V DPATD VISW+A G +FV+W F+ LP FKH++F+SF+RQLNTY
Sbjct: 3 PFLTKVYDMVSDPATDAVISWSAGGGSFVIWDSHAFSARPLPRHFKHNHFTSFIRQLNTY 62
Query: 236 GFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
GF KV RWE+ N+ F KG++ LL I+R+K
Sbjct: 63 GFHKVDPDRWEWANEGFIKGQKHLLKTIKRKK 94
>gi|662928|emb|CAA87078.1| (Z46954) heat shock transcription factor 33 [Glycine
max]
Length = 142
Frame 2 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | 142
0 50 100
Plus Strand HSPs:
Score = 266 (93.6 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 48/65 (73%), Positives = 55/65 (84%), Frame = +2
Query: 137 FVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHE 316
F+VW+P EFARDLLP FKH+NFSSFVRQLNTYGFRKV RWEF ND F++GER LL +
Sbjct: 4 FIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGERALLRD 63
Query: 317 IRRRK 331
I+RRK
Sbjct: 64 IQRRK 68
>gi|11386850|sp|Q9S7U5|HSF5_ARATH HEAT SHOCK FACTOR PROTEIN 5 (HSF 5) (HEAT
SHOCK TRANSCRIPTION FACTOR 5) (HSTF 5) >gi|6624614|emb|CAB63801.1|
(AJ251866) heat shock factor 5 [Arabidopsis thaliana]
>gi|12324064|gb|AAG51992.1|AC012563_2 (AC012563) putative heat
shock transcription factor; 58077-59546 [Arabidopsis thaliana]
Length = 374
Frame 2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 374
0 150 300
Plus Strand HSPs:
Score = 262 (92.2 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 50/93 (53%), Positives = 63/93 (67%), Frame = +2
Query: 56 PFLLKTYMLVEDPATDDVISWNAKG-TAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNT 232
PFL K Y +V+D TD +ISW+ +FV+ F+ LLP FKHSNFSSF+RQLN
Sbjct: 19 PFLRKCYDMVDDSTTDSIISWSPSADNSFVILDTTVFSVQLLPKYFKHSNFSSFIRQLNI 78
Query: 233 YGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
YGFRKV RWEF ND F +G+++LL + RRK
Sbjct: 79 YGFRKVDADRWEFANDGFVRGQKDLLKNVIRRK 111
>gi|11761077|dbj|BAB19067.1| (AP002744) putative heat shock factor protein 1
(HSF 1) [Oryza sativa]
Length = 348
Frame 2 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | 348
0 150 300
Plus Strand HSPs:
Score = 246 (86.6 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 56/116 (48%), Positives = 70/116 (60%), Frame = +2
Query: 20 GLLEC----GRKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTL 187
GL+ C G++ T P F+ KTY +V DP TD ++ W +FVV P F++ LLP
Sbjct: 11 GLIGCCGGDGQQQTAP-FVAKTYQMVCDPRTDALVRWGRDNNSFVVVDPAAFSQLLLPCF 69
Query: 188 FKHSNFSSFVRQLNTY---------GFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
FKH NFSSFVRQLNTY GFRKV RWEF ++ F +G+ LL I RRK
Sbjct: 70 FKHGNFSSFVRQLNTYVSIIQSPAPGFRKVHPDRWEFAHESFLRGQTHLLPRIVRRK 126
>gi|2129829|pir||S59541 heat shock transcription factor HSF29 - soybean
(fragment) >gi|671866|emb|CAA87075.1| (Z46951) heat shock
transcription factor 29 [Glycine max]
Length = 298
Frame 2 hits (HSPs): __________
Annotated Domains: _____ ____
__________________________________________________
Database sequence: | | | | | | | 298
0 50 100 150 200 250
__________________
Annotated Domains:
PROSITE HSF_DOMAIN: HSF-type DNA-binding domain 7..31
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 127..148
__________________
Plus Strand HSPs:
Score = 232 (81.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 43/58 (74%), Positives = 49/58 (84%), Frame = +2
Query: 158 EFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
EFARDLLP FKH+N+SSFVRQLNTYGFRKV RWEF ND F++GER LL +I+RRK
Sbjct: 1 EFARDLLPKYFKHNNYSSFVRQLNTYGFRKVVPDRWEFANDCFRRGERALLRDIQRRK 58
>gi|2129830|pir||S59540 heat shock transcription factor HSF31 - soybean
(fragment) >gi|671867|emb|CAA87079.1| (Z46955) heat shock
transcription factor 31 [Glycine max]
Length = 306
Frame 2 hits (HSPs): __________
Annotated Domains: _____
__________________________________________________
Database sequence: | | | | | | | | 306
0 50 100 150 200 250 300
__________________
Annotated Domains:
PROSITE HSF_DOMAIN: HSF-type DNA-binding domain 7..31
__________________
Plus Strand HSPs:
Score = 229 (80.6 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 43/58 (74%), Positives = 48/58 (82%), Frame = +2
Query: 158 EFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRK 331
EFAR+LLP FKH+NFSSFVRQLNTYGFRK+ RWEF N+ FKKGE+ LL EI RRK
Sbjct: 1 EFARNLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRK 58
>gi|7484999|pir||T05024 heat shock transcription factor homolog F13C5.40 -
Arabidopsis thaliana >gi|2832615|emb|CAA16744.1| (AL021711) heat
shock transcription factor-like protein [Arabidopsis thaliana]
>gi|7268681|emb|CAB78889.1| (AL161549) heat shock transcription
factor-like protein [Arabidopsis thaliana]
Length = 291
Frame 2 hits (HSPs): _______________ ________________
__________________________________________________
Database sequence: | | | | | | | 291
0 50 100 150 200 250
Plus Strand HSPs:
Score = 211 (74.3 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 36/88 (40%), Positives = 55/88 (62%), Frame = +2
Query: 56 PFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTY 235
PF K Y +V+DP++D +ISW+ G +F++W P EF +D L LF + F +L +
Sbjct: 146 PFPTKIYEMVDDPSSDAIISWSQSGKSFIIWNPQEFCKDHLRRLFNTLHIHFFFYKLKIF 205
Query: 236 GFRKVATSRWEFFNDKFKKGERELLHEI 319
GF+K+ +WEF ND F +G+R L+ I
Sbjct: 206 GFKKINPKKWEFANDNFVRGQRHLVEII 233
Score = 193 (67.9 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 34/87 (39%), Positives = 55/87 (63%), Frame = +2
Query: 59 FLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTYG 238
F+ TY +V+D + D +ISW+ G +F++W P EF +LL F ++F L ++G
Sbjct: 14 FITTTYDMVDDLSLDSIISWSQSGKSFIIWNPEEFYNNLLQR-FCFQRINTFFSFLFSHG 72
Query: 239 FRKVATSRWEFFNDKFKKGERELLHEI 319
FRK+ + +WEF ND F +G+R L++ I
Sbjct: 73 FRKIDSGKWEFANDNFVRGQRHLINNI 99
>gi|5921133|dbj|BAA84581.1| (AB029347) transcription factor HSF4 [Homo sapiens]
Length = 366
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 366
0 150 300
Plus Strand HSPs:
Score = 213 (75.0 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 46/103 (44%), Positives = 61/103 (59%), Frame = +2
Query: 53 PPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNT 232
P FL K + LV DP TD +I W+ GT+F+V FA+++LP FKHSN +SFVRQLN
Sbjct: 18 PAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNM 77
Query: 233 YGFRKVAT-----------SRWEFFNDKFKKGERELLHEIRRR 328
YGFRKV + EF + F +G +LL +RR+
Sbjct: 78 YGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRK 120
WARNING: HSPs involving 61 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.329 0.136 0.434
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.322 0.138 0.438
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.348 0.150 0.529
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.330 0.142 0.457
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.330 0.139 0.432
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.349 0.150 0.562
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 110 110 10. 69 3 12 22 0.12 32
29 0.12 34
+2 0 111 111 10. 70 3 12 22 0.12 32
29 0.12 34
+1 0 111 111 10. 70 3 12 22 0.12 32
29 0.12 34
-1 0 111 111 10. 70 3 12 22 0.12 32
29 0.12 34
-2 0 111 111 10. 70 3 12 22 0.12 32
29 0.12 34
-3 0 110 110 10. 69 3 12 22 0.12 32
29 0.12 34
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 111
No. of states in DFA: 582 (57 KB)
Total size of DFA: 162 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 130.73u 0.98s 131.71t Elapsed: 00:00:45
Total cpu time: 130.75u 1.02s 131.77t Elapsed: 00:00:45
Start: Wed Jan 16 14:08:43 2002 End: Wed Jan 16 14:09:28 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000