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UniSTS:43757 Links
D9S165
Homo sapiens chromosome 9
Macaca mulatta chromosome 15
Pan troglodytes chromosome 9

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:GACTTTGGCTGCTAGATGTG
Reverse primer:AGAGTTACCCAAGTTTCTGACA
PCR product size:238 (bp), Homo sapiens
GenBank Accession:Z16644

   Homo sapiens
Name: D9S165
Also known as: AFM136xc5 SHGC-757 stSG580
Polymorphism info:  

Cross References Help

Mapping InformationHelp
D9S165 Sequence Map: Chr 9|Celera Map Viewer
  Position: 33104452-33104691 (bp)
 
D9S165 Sequence Map: Chr 9|HuRef Map Viewer
  Position: 33131210-33131447 (bp)
 
D9S165 Sequence Map: Chr 9 Map Viewer
  Position: 33163445-33163684 (bp)
 
SHGC-757 NCBI RH Map: Chr 9 Map Viewer
  Position: 420.9 (cR)
  Lod score: 2.48
 
SHGC-757 TNG Map: Chr 9 Map Viewer
  Position: 17107 (cR50000)
  Lod score: 17.2
  Reference Interval: 38
 
SHGC-757 Stanford-G3 Map: Chr 9 Map Viewer
  Position: 1427 (cR10000)
  Lod score: F
  Reference Interval: 6
 
AFM136xc5 GeneMap99-G3 Map: Chr 9 Map Viewer
  Position: 1474 (cR10000)
  Lod score: F
  Reference Interval: D9S165-D9S1874

Electronic PCR results Help
Genomic (5 of 7)[Show All Hits]
Z16644.1 10 .. 247 (238 bp)  
AL161445.10 77093 .. 77332 (240 bp)  
CH003504.1 34848400 .. 34848639 (240 bp)  
CH471071.2 32988971 .. 32989210 (240 bp)  
CM000260.1 33104452 .. 33104691 (240 bp)  
 
Whole Genome Shotgun sequences (3)
AADC01082474.1 113717 .. 113956 (240 bp)  
AADB02012500.1 312104 .. 312343 (240 bp)  
ABBA01065064.1 139790 .. 140027 (238 bp)  
 

   Macaca mulatta
Name: D9S165
Polymorphism info:  
Mapping InformationHelp
D9S165 Sequence Map: Chr 15 Map Viewer
  Position: 44056548-44056788 (bp)

   Pan troglodytes
Name: D9S165
Polymorphism info:  
Mapping InformationHelp
D9S165 Sequence Map: Chr 9 Map Viewer
  Position: 33818893-33819114 (bp)
 
D9S165 Sequence Map: Chr 9|NW_001240885.1 Map Viewer
  Position: 547-774 (bp)

Electronic PCR results Help
Genomic (1)
CM000323.1 33818893 .. 33819114 (222 bp)  
 
Whole Genome Shotgun sequences (3)
AADA01054074.1 16476 .. 16698 (223 bp)  
AACZ02109353.1 547 .. 774 (228 bp)  
AACZ02103280.1 6244 .. 6465 (222 bp)  
 

 

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