R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|9759575|dbj|BAB11138.1| (AB018108) gene_id:K14B20.8~unknown protein
[Arabidopsis thaliana]
Length = 432
Frame 3 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | 432
0 150 300
Plus Strand HSPs:
Score = 523 (184.1 bits), Expect = 2.8e-49, P = 2.8e-49
Identities = 118/215 (54%), Positives = 154/215 (71%), Frame = +3
Query: 24 DLDGVLGVTEDVVAFARSVALHPETWLDFPLPDDEDS-DDFDLSDAQQEHALAVEHLAPS 200
D D V+GVTE++VAF + +A+HPETWLDFPLPDD+DS DDF+L+DAQ EHALAVE LAPS
Sbjct: 139 DYD-VIGVTEELVAFVKDLAMHPETWLDFPLPDDDDSFDDFELADAQYEHALAVERLAPS 197
Query: 201 LAALRMELCPGYMSDGNFWKIYFVLVHPRLSKTDAAILSTPQIMEARAMLTQALDKRSKE 380
LA+LR+ELCP YM++ FW+IYFVLVHP+LSK A +LSTPQ++EAR+ML+Q L KRSK
Sbjct: 198 LASLRIELCPEYMTENCFWRIYFVLVHPKLSKDHALLLSTPQVLEARSMLSQELQKRSKL 257
Query: 381 KKESDLSAGGNIPSKEEEQHLFVPSNAQLEPVPLQTSAAEAAPSVVVSDVEMEKHVVP-- 554
E AG + + + L VP P P +T+A + V SDVE +KH +
Sbjct: 258 PVE----AGSSEANTVIVEPLTVP------PSP-ETAAVKIVNPVESSDVETDKHPIESK 306
Query: 555 --EIIDKSVVKEAPVISSAEQSSSGSTNRFLDETYDDDAD 668
+I+DKSV++E S++ SSS N +D+ DDDAD
Sbjct: 307 EIQIVDKSVIEER---STSTASSSRFINVQVDDEDDDDAD 343
>gi|11358044|pir||T46046 hypothetical protein T16K5.150 - Arabidopsis thaliana
>gi|6723425|emb|CAB66918.1| (AL132965) putative protein
[Arabidopsis thaliana]
Length = 428
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 428
0 150 300
Plus Strand HSPs:
Score = 509 (179.2 bits), Expect = 8.6e-48, P = 8.6e-48
Identities = 113/225 (50%), Positives = 152/225 (67%), Frame = +3
Query: 27 LDGVLGVTEDVVAFARSVALHPETWLDFPLPDDEDS-DDFDLSDAQQEHALAVEHLAPSL 203
+ +GVTE+VV FAR +ALHPETWLDFP PD++D+ DDF+++DAQ EHALAVE+LA SL
Sbjct: 159 IGNAIGVTEEVVLFARDLALHPETWLDFPFPDEDDNFDDFEMTDAQYEHALAVENLASSL 218
Query: 204 AALRMELCPGYMSDGNFWKIYFVLVHPRLSKTDAAILSTPQIMEARAMLT-QALDKRSKE 380
AALR+ELCP YMS+ FW+IYFVLVHP SK DA LSTPQ++E+RA+L+ + L KR+K+
Sbjct: 219 AALRIELCPAYMSEYCFWRIYFVLVHPIFSKHDALTLSTPQVLESRALLSHELLRKRNKD 278
Query: 381 KKESDLSAGGNIPSKEEEQHLFVPSNA--QLEPVPLQTSAAEAAPSVVVSDVEMEKHVVP 554
S+ S+ E LF P+N + EP P++T E S S+ E EKH V
Sbjct: 279 TVVVPESSDRGADSENVEP-LFQPTNPSPKSEPEPVKTITVETIHSAERSEFETEKHTVE 337
Query: 555 ----EIIDKSVVKEAPVISSAE---QSS-SGSTNRFLDETYDDDAD 668
+++DK V++E P + + QS +GS+ R +D DDDAD
Sbjct: 338 TKEVQVVDKPVIEERPAPAYHDKPVQSLVTGSSPRVIDVQVDDDAD 383
>gi|7486518|pir||T05882 hypothetical protein F6H11.10 - Arabidopsis thaliana
>gi|2827699|emb|CAA16672.1| (AL021684) predicted protein
[Arabidopsis thaliana]
Length = 1026
Frame 3 hits (HSPs): __ _________
__________________________________________________
Database sequence: | | | | | | | | 1026
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 378 (133.1 bits), Expect = 9.6e-46, Sum P(2) = 9.6e-46
Identities = 91/177 (51%), Positives = 120/177 (67%), Frame = +3
Query: 138 DFDLSDAQQEHALAVEHLAPSLAALRMELCPGYMSDGNFWKIYFVLVHPRLSKTDAAILS 317
DF+L+DAQ EHALAVE LAPSLA+LR+ELCP YM++ FW+IYFVLVHP+LSK A +LS
Sbjct: 771 DFELADAQYEHALAVERLAPSLASLRIELCPEYMTENCFWRIYFVLVHPKLSKDHALLLS 830
Query: 318 TPQIMEARAMLTQALDKRSKEKKESDLSAGGNIPSKEEEQHLFVPSNAQLEPVPLQTSAA 497
TPQ++EAR+ML+Q L KRSK E AG + + + L VP P P +T+A
Sbjct: 831 TPQVLEARSMLSQELQKRSKLPVE----AGSSEANTVIVEPLTVP------PSP-ETAAV 879
Query: 498 EAAPSVVVSDVEMEKHVVP----EIIDKSVVKEAPVISSAEQSSSGSTNRFLDETYDDDA 665
+ V SDVE +KH + +I+DKSV++E S++ SSS N +D+ DDDA
Sbjct: 880 KIVNPVESSDVETDKHPIESKEIQIVDKSVIEER---STSTASSSRFINVQVDDEDDDDA 936
Query: 666 D 668
D
Sbjct: 937 D 937
Score = 151 (53.2 bits), Expect = 9.6e-46, Sum P(2) = 9.6e-46
Identities = 27/39 (69%), Positives = 34/39 (87%), Frame = +3
Query: 24 DLDGVLGVTEDVVAFARSVALHPETWLDFPLPDDEDSDD 140
D D V+GVTE++VAF + +A+HPETWLDFPLPDD+DS D
Sbjct: 699 DYD-VIGVTEELVAFVKDLAMHPETWLDFPLPDDDDSFD 736
>gi|4874276|gb|AAD31341.1|AC007354_14 (AC007354) ESTs gb|AA395702, gb|AA395400,
gb|T22596 and gb|T43781 come from this gene. [Arabidopsis thaliana]
Length = 429
Frame 3 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | 429
0 150 300
Plus Strand HSPs:
Score = 427 (150.3 bits), Expect = 4.2e-39, P = 4.2e-39
Identities = 101/219 (46%), Positives = 142/219 (64%), Frame = +3
Query: 12 EEEHDLDGVLGVTEDVVAFARSVALHPETWLDFPLPDDEDSDDFDLSDAQQEHALAVEHL 191
EEE ++ V +T++V+AFAR++A+HPETWLDFPL DED DD ++SDAQ+ HALA+E L
Sbjct: 165 EEEEEIAAV-ALTDEVLAFARNIAMHPETWLDFPLDPDEDLDDLEMSDAQRGHALAIERL 223
Query: 192 APSLAALRMELCPGYMSDGNFWKIYFVLVHPRLSKTDAAILSTPQIMEARAMLTQALDKR 371
AP LAALR+ELCP +MS G FWK+YFVL+ RL+K DA +LS+PQ+MEARA+ + L +
Sbjct: 224 APRLAALRIELCPCHMSVGYFWKVYFVLLLSRLNKHDAHLLSSPQVMEARALWMKELQNQ 283
Query: 372 SKEKKES-DLSAGG-NIPSKEEEQHLFVPSNAQLEPVPLQTSAAEAAPSVVVSDVEMEKH 545
+ KES D+ +I + P L P + A E PS++ D E
Sbjct: 284 THSSKESRDMILEEEDITPSTSNYYNHAPPEF-LSP---RIYAFEP-PSIMYRDFE-HGF 337
Query: 546 VVPEIIDKSVVKEAPVISSAEQSSSGS-TNRFLDETYDDDAD 668
+ IDK+V++E P+ + + S+S S T++ D DDD D
Sbjct: 338 ENAQFIDKAVIEEKPIQKNDKNSASLSQTSK--DVVDDDDDD 377
>gi|6573740|gb|AAF17660.1|AC009398_9 (AC009398) F20B24.15 [Arabidopsis
thaliana]
Length = 452
Frame 3 hits (HSPs): _____ _____ ____________________
__________________________________________________
Database sequence: | | | || 452
0 150 300 450
Plus Strand HSPs:
Score = 284 (100.0 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 75/177 (42%), Positives = 108/177 (61%), Frame = +3
Query: 138 DFDLSDAQQEHALAVEHLAPSLAALRMELCPGYMSDGNFWKIYFVLVHPRLSKTDAAILS 317
+ ++SDAQ+ HALA+E LAP LAALR+ELCP +MS G FWK+YFVL+ RL+K DA +LS
Sbjct: 229 NLEMSDAQRGHALAIERLAPRLAALRIELCPCHMSVGYFWKVYFVLLLSRLNKHDAHLLS 288
Query: 318 TPQIMEARAMLTQALDKRSKEKKES-DLSAGG-NIPSKEEEQHLFVPSNAQLEPVPLQTS 491
+PQ+MEARA+ + L ++ KES D+ +I + P L P +
Sbjct: 289 SPQVMEARALWMKELQNQTHSSKESRDMILEEEDITPSTSNYYNHAPPEF-LSP---RIY 344
Query: 492 AAEAAPSVVVSDVEMEKHVVPEIIDKSVVKEAPVISSAEQSSSGS-TNRFLDETYDDDAD 668
A E PS++ D E + IDK+V++E P+ + + S+S S T++ D DDD D
Sbjct: 345 AFEP-PSIMYRDFE-HGFENAQFIDKAVIEEKPIQKNDKNSASLSQTSK--DVVDDDDDD 400
Score = 138 (48.6 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 25/42 (59%), Positives = 34/42 (80%), Frame = +3
Query: 12 EEEHDLDGVLGVTEDVVAFARSVALHPETWLDFPLPDDEDSD 137
EEE ++ V +T++V+AFAR++A+HPETWLDFPL DED D
Sbjct: 165 EEEEEIAAV-ALTDEVLAFARNIAMHPETWLDFPLDPDEDLD 205
Score = 43 (15.1 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 12/40 (30%), Positives = 18/40 (45%), Frame = +3
Query: 42 GVTEDVVAFARSVALHPETWLDF--PLPDDEDSDDFDLSD 155
GV +D+ ++ +F PLPD S DLS+
Sbjct: 58 GVKDDLTELGHTLTRQFRGVANFLAPLPDGSSSSSSDLSN 97
>gi|4662642|gb|AAD26912.1|AC006429_2 (AC006429) hypothetical protein
[Arabidopsis thaliana]
Length = 362
Frame 3 hits (HSPs): __________________
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | 362
0 150 300
Plus Strand HSPs:
Score = 234 (82.4 bits), Expect = 6.5e-21, Sum P(2) = 6.5e-21
Identities = 53/132 (40%), Positives = 77/132 (58%), Frame = +3
Query: 30 DGVLGVTEDVVAFARSVALHPETWLDFPLPDDEDSDDFDLSDAQQEHALAVEHLAPSLAA 209
D V G++E+VV FA ++ P W DFPL D + F+LS+AQ+ HA A+E L P L A
Sbjct: 106 DQVPGISEEVVDFAVKISTKPGCWTDFPLSLDTE---FELSEAQRAHASAIEDLVPGLVA 162
Query: 210 LRMELCPGYMSDGNFWKIYFVLVHPRLSKTDAAILSTPQIMEARAMLTQALDKRSKEKKE 389
++ ++ YM D +FW IYF+L+ PRL+ D +L+T ++ E R L L K KE
Sbjct: 163 VKNQVS-SYMDDEHFWLIYFILLMPRLNGHDFELLATCKVFETRDQLLLKLQK--KETGS 219
Query: 390 SDLSAGGNIPSK 425
S + G P +
Sbjct: 220 SKSTTGHETPEE 231
Score = 38 (13.4 bits), Expect = 6.5e-21, Sum P(2) = 6.5e-21
Identities = 9/14 (64%), Positives = 13/14 (92%), Frame = +1
Query: 538 RN-MLFRRLLTSLWL 579
RN +LFR+L+ +LWL
Sbjct: 348 RNRLLFRKLI-ALWL 361
>gi|8096314|dbj|BAA95817.1| (AP002069) hypothetical protein [Oryza sativa]
Length = 399
Frame 3 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 399
0 150 300
Plus Strand HSPs:
Score = 198 (69.7 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 41/84 (48%), Positives = 55/84 (65%), Frame = +3
Query: 45 VTEDVVAFARSVALHPETWLDFP-LPDDEDSDDFDLSDAQQEHALAVEHLAPSLAALRME 221
V +DVV A+++A PE W+DFP L DE+S +SD Q++H A+E L P LA+LR
Sbjct: 134 VADDVVGAAQALAARPEAWIDFPVLALDENSI---ISDIQRDHMEAIEKLVPDLASLRAR 190
Query: 222 LCPGYMSDGNFWKIYFVLVHPRLSK 296
LCP YM FWKIYF L+ L++
Sbjct: 191 LCPSYMDIDVFWKIYFTLLESNLTE 215
>gi|11994664|dbj|BAB02892.1| (AB028609) gb|AAF07359.1~gene_id:K7P8.11~similar
to unknown protein [Arabidopsis thaliana]
Length = 186
Frame 3 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | | 186
0 50 100 150
Plus Strand HSPs:
Score = 131 (46.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 42/137 (30%), Positives = 69/137 (50%), Frame = +3
Query: 9 SEEEHDLDGVLGVTEDVVAFARSVALHP---------ETWLDF-PLPDDEDSDDF----- 143
S +E D +LGVT++++ RS + E + PL D+++
Sbjct: 29 SVKEEGKDEILGVTDELIDHVRSFTIDTFKNFSLEDEEEEVSVNPLGDEDNGMSSSANVK 88
Query: 144 -DLSDAQQEHALAVEHLAPSLAALRMELCPGYMSDGNFWKIYFVLVHPRLSKTDAAILST 320
DLSD Q++HA+ V + L+ LR +LCP + + FW+IYF LV ++K + +
Sbjct: 89 KDLSDWQEKHAVLVLSKSKELSQLRFKLCPRVLKEHQFWRIYFQLVRKIVAKYEVLAIQQ 148
Query: 321 PQIMEARAMLTQALDKRSKEKK 386
QI R M + D ++ E K
Sbjct: 149 AQI---RRMAME--DSKTSESK 165
>gi|12323210|gb|AAG51582.1|AC011665_3 (AC011665) hypothetical protein
[Arabidopsis thaliana]
Length = 320
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | | 320
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 107 (37.7 bits), Expect = 0.014, P = 0.013
Identities = 21/45 (46%), Positives = 27/45 (60%), Frame = +3
Query: 144 DLSDAQQEHALAVEHLAPSLAALRMELCPGYMSDGNFWKIYFVLV 278
DLS+ Q+ HA V ++ LR ELCP M + FW+IYF LV
Sbjct: 182 DLSEWQERHATLVLGSVKQISKLRYELCPRVMKERRFWRIYFTLV 226
>gi|7493381|pir||T39903 serine-rich protein - fission yeast
(Schizosaccharomyces pombe) >gi|3873550|emb|CAA22127.1| (AL033534)
hypothetical serine-rich secreted protein [Schizosaccharomyces
pombe]
Length = 534
Frame -2 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | 534
0 150 300 450
Minus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.19, P = 0.18
Identities = 56/202 (27%), Positives = 89/202 (44%), Frame = -2
Query: 607 SADEITGASLTTDLSIISGTTCFSISTSETTTDGAASAADVWRGTGSS*ALLGTKRCCSS 428
+A T +S + S++S ++ S S+S T T + S + + T SS + + SS
Sbjct: 200 AAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSI-PSTSSSSSSTSSSLSSSS 258
Query: 427 SFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGVDKIAASVLLSLGCTSTKYIFQKL 248
S A S S S++ S + + +S I++S S TST
Sbjct: 259 SSS----TASSSSSSSSIISSSSS----SSSSPTSTSSTISSSSSSSSSPTSTSSTISSS 310
Query: 247 PSLMYPGHSSILRAAKLGARCS-----TARACSCCASDKSKSSESSSSGRGKSSQVSGCK 83
S SS L ++ + + S T+ + + +S S SS S SS S S
Sbjct: 311 SSSS-SSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFS 369
Query: 82 ATLLAKATTSSVTPRTPSRSCSSSDPA 2
+T+ + ++TSS T S S SSS PA
Sbjct: 370 STVSSSSSTSSST--LTSSSSSSSRPA 394
Score = 95 (33.4 bits), Expect = 0.72, P = 0.51
Identities = 55/221 (24%), Positives = 95/221 (42%), Frame = -2
Query: 667 SASSS*VSSKNLLVEPDDDCSADEITGASLTTDLSIISGTTCFSISTSETTTDGAASAAD 488
S SSS +SS +++ S+ T S + S I T+ S STS + + ++S+
Sbjct: 204 STSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTA 263
Query: 487 VWRGTGSS*ALLGTKRCCSSSFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGVDKI 308
+ SS +++ + SSS P S + S S + + +
Sbjct: 264 --SSSSSSSSIISSSSSSSSS------PTSTSSTISSSSSSSSSPTSTSSTISSSSSSSS 315
Query: 307 AASVLLSLGCTSTKYIFQKLP---SLMYPGHSSILRAAKLGARCSTARACSCCASDKSKS 137
+ S LS S+ F P S SS ++ + S++++ S +S S S
Sbjct: 316 SFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSS 375
Query: 136 SESSSSGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCSSSDP 5
S +SSS SS S A+ + +++ S + ++ S S SSS P
Sbjct: 376 SSTSSSTLTSSSSSSSRPASSSSHSSSLS-SHKSSSSSKSSSAP 418
Score = 91 (32.0 bits), Expect = 2.0, P = 0.87
Identities = 53/218 (24%), Positives = 91/218 (41%), Frame = -2
Query: 664 ASSS*VSSKNLLVEPDDDCSADEITGASLTTDLSIISGTTCFSISTSETTTDGAASAADV 485
A+S SS + + + +SL S+ S S S + + + S++D
Sbjct: 110 ATSQLPSSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDP 169
Query: 484 WRGTGSS*ALLGTKRCCSSSFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGVDKIA 305
T S+ + L + SSS + + S +F S S + ++ +S++ +
Sbjct: 170 L--TSSTFSSLSSST--SSSQPSV--SSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPS 223
Query: 304 ASVLLSLGCTSTKYIFQKLPSLMYPGHSSILRAAKLGARCSTARACSCCASDKSKSSESS 125
+S +L TS+ +PS SS + + STA + S +S S SS SS
Sbjct: 224 SSSSSTL--TSSSLSTSSIPSTS-SSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSS 280
Query: 124 SSGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCSSS 11
SS SS +S ++ + +TSS + S S S S
Sbjct: 281 SSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFS 318
Score = 86 (30.3 bits), Expect = 7.5, P = 1.0
Identities = 44/207 (21%), Positives = 91/207 (43%), Frame = -2
Query: 667 SASSS*VSSKNLLVEPDDDCSADEITGASLTTDLSIISGTTCFSISTSETTTDGAASAAD 488
S +SS SS +++ S+ T +++++ S S T S + S +++ ++ ++
Sbjct: 261 STASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSST 320
Query: 487 VWRGTGSS*ALLGTKRCCSSSFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGVDKI 308
+ + SS + + SSS + S SF S SK+ + + +S +
Sbjct: 321 LSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKS--SSSFSSTVSSSSST 378
Query: 307 AASVLLSLGCTSTKYIFQKLPSLMYPGHSSILRAAKLGARCSTARACSCCASDKSKSSES 128
++S L S +S++ P+ HSS L + K + S + + ++ S+ S
Sbjct: 379 SSSTLTSSSSSSSR------PASS-SSHSSSLSSHK-SSSSSKSSSAPVSSAFYHNSTSS 430
Query: 127 SSSGRGKSSQVSGCKATLLAKATTSSV 47
SS S +S + + A++SS+
Sbjct: 431 RSSSHSSSHSLSSLSSKPILTASSSSL 457
>gi|2077900|dbj|BAA19915.1| (AB003521) flocculin [Saccharomyces cerevisiae]
Length = 849
Frame -2 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | | 849
0 150 300 450 600 750
Minus Strand HSPs:
Score = 99 (34.8 bits), Expect = 0.45, P = 0.36
Identities = 63/201 (31%), Positives = 97/201 (48%), Frame = -2
Query: 607 SADEITGASLTTDLSIIS------GTTCFSISTSETTTDGAASAADVWRGTGSS*ALLGT 446
S+ +IT +S+T+ II+ GT+ IS+S+T++ +S T S L T
Sbjct: 164 SSGQIT-SSITSSRPIITPFYPSNGTSV--ISSSDTSSSDTSSLVTSSLVTSS----LVT 216
Query: 445 KRCCSSSF-EGIFPPADKSDSFFSLLLLSKA*VNIALASIICGVDKIAASVLLSLGCTST 269
SSS + + S S S L+ S + +S+ I++SV+ S TST
Sbjct: 217 SSVISSSVTSSLVTSSVISSSVTSSLVTSSVISSSVTSSLFTSSPVISSSVISSSTTTST 276
Query: 268 KYIFQKLPSLMYPGHSSILRAAKLGARCSTARACSCCASDKSKSSESSSSGRGKSSQVSG 89
F+ S + P SS +++ ++ S+A + S S S SSES S SS
Sbjct: 277 SIFFESSKSSVIPTSSSTSGSSE--SKTSSASSSS---SSSSISSESPKSTYSSSSLPPV 331
Query: 88 CKATLLAKATTSS---VTPRTPSRSCSSSDP 5
AT ++ T SS VT T S+ +SS P
Sbjct: 332 TSATT-SQETASSLPPVTSVTTSQEITSSLP 361
>gi|8885520|dbj|BAA97453.1| (AB029393) streptococcal hemagglutinin
[Streptococcus gordonii]
Length = 2178
Frame -2 hits (HSPs): _______ ______
__________________________________________________
Database sequence: | | | | | | 2178
0 500 1000 1500 2000
Minus Strand HSPs:
Score = 103 (36.3 bits), Expect = 0.45, P = 0.37
Identities = 59/222 (26%), Positives = 94/222 (42%), Frame = -2
Query: 667 SASSS*VSSKNLLVEPDDDCSADEITGASLTTDLSIISGTTCFSISTSETTTDGAASAAD 488
SAS S +S ++ SA S +T S+ S + S S S + ++ A+++A
Sbjct: 1324 SASESASTSASVSASESASTSASVSASESASTSASV-SASESASTSASVSASESASTSAS 1382
Query: 487 VWRGTGSS*ALLGTKRCCS-SSFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGVDK 311
V + S A C S S++ A +S S + + S++ A S
Sbjct: 1383 V---SASESASTSASVCASESAYTSASASASESASTSASVSASESASTSASVSASESA-Y 1438
Query: 310 IAASVLLS-LGCTSTKYIFQKLPSLM--YPGHSSILRAAKLGARCSTARACSCCASDKSK 140
+ASV S G TS + S S +A + A S + + S CAS S
Sbjct: 1439 TSASVSASESGSTSASVSASESASTSASVSASESASTSASVSASTSASTSASVCASASSS 1498
Query: 139 SSES-SSSGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCSSSDPA 2
+S S S+SG +S + A+ S+ T + S S S+S+ A
Sbjct: 1499 TSASVSASGSASTSASVSASESASTSASVSASTSASTSASVSASESA 1545
Score = 93 (32.7 bits), Expect = 6.1, P = 1.0
Identities = 52/222 (23%), Positives = 89/222 (40%), Frame = -2
Query: 667 SASSS*VSSKNLLVEPDDDCSADEITGASLTTDLSII---SGTTCFSISTSETTTDGAAS 497
SAS+S +S ++ SA S +T S+ S +T S+S SE+ + A+
Sbjct: 664 SASTSASTSASVSASTSASTSASVSASTSASTSASVSASESASTSASVSASESASTSASV 723
Query: 496 AADVWRGTGSS*ALLGTKRCCSSSFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGV 317
+A T +S T S+S A S S + S + +++ +
Sbjct: 724 SASTSASTSAS-VSASTSASTSASVSAS-ESASTSASVSASTSASTS-ASVSASESASTS 780
Query: 316 DKIAASVLLSLGCTSTKYIFQKLPSLMYPGHSSILRAAKLGARCSTARACSCCASDKSKS 137
++AS S S S S +A + A S + + S AS+ + +
Sbjct: 781 ASVSASTYASTSA-SVSASESASTSASVSASESASTSASVSASTSASTSASVSASESAST 839
Query: 136 SESSSSGRGKSSQVS-GCKATLLAKATTSSVTPRTPSRSCSSSDPA 2
S S S+ S+ S + A+ S+ T + S S S+S+ A
Sbjct: 840 SASVSASESASTSASVSASESASTSASVSASTSASTSASVSASESA 885
Score = 93 (32.7 bits), Expect = 6.1, P = 1.0
Identities = 50/222 (22%), Positives = 93/222 (41%), Frame = -2
Query: 667 SASSS*VSSKNLLVEPDDDCSADEITGASLTTDLSIISGT---TCFSISTSETTTDGAAS 497
SAS+S +S ++ SA S +T S+ + T T S+S SE+ + A+
Sbjct: 724 SASTSASTSASVSASTSASTSASVSASESASTSASVSASTSASTSASVSASESASTSASV 783
Query: 496 AADVWRGTGSS*ALLGTKRCCSSSFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGV 317
+A + T +S + ++ +S+ A S S + S + +++ +
Sbjct: 784 SASTYASTSAS--VSASESASTSASVSASESASTSASVSASTSASTS-ASVSASESASTS 840
Query: 316 DKIAASVLLSLGCTSTKYIFQKLPSLMYPGHSSILRAAKLGARCSTARACSCCASDKSKS 137
++AS S S S +S +A + A S + + S AS+ + +
Sbjct: 841 ASVSASESASTSA-SVSASESASTSASVSASTSASTSASVSASESASTSASVSASESAST 899
Query: 136 SESSSSGRGKSSQVS-GCKATLLAKATTSSVTPRTPSRSCSSSDPA 2
S S S+ S+ S + A+ S+ T + S S S+S+ A
Sbjct: 900 SASVSASESASTSASVSASESASTSASVSASTSASTSASVSASESA 945
>gi|2497870|sp|P55947|MTCU_HELPO COPPER-METALLOTHIONEIN (CU-MT)
Length = 64
Frame -2 hits (HSPs): _________________________________
Annotated Domains: _ _____________________________________________
__________________________________________________
Database sequence: | | | | | 64
0 20 40 60
__________________
Annotated Domains:
Entrez acetylation site 1
Entrez metal-binding site: COPPER. 7
Entrez metal-binding site: COPPER. 11
Entrez metal-binding site: COPPER. 16
Entrez metal-binding site: COPPER. 18
Entrez metal-binding site: COPPER. 22
Entrez metal-binding site: COPPER. 24
Entrez metal-binding site: COPPER. 28
Entrez metal-binding site: COPPER. 30
Entrez metal-binding site: COPPER. 33
Entrez metal-binding site: COPPER. 36
Entrez metal-binding site: COPPER. 38
Entrez metal-binding site: COPPER. 43
Entrez metal-binding site: COPPER. 45
Entrez metal-binding site: COPPER. 49
Entrez metal-binding site: COPPER. 55
Entrez metal-binding site: COPPER. 57
Entrez metal-binding site: COPPER. 61
Entrez metal-binding site: COPPER. 63
PRODOM PD000782: MT(23) MT1(12) MT2(11) 7..63
__________________
Minus Strand HSPs:
Score = 73 (25.7 bits), Expect = 0.51, P = 0.40
Identities = 17/42 (40%), Positives = 22/42 (52%), Frame = -2
Query: 202 KLGARCSTARACSC-CASDKSK-SSESSSSGRGKSSQVSGCK 83
K GA C+ R SC C++D K S+ + SG K GCK
Sbjct: 23 KCGAGCNCDRCSSCHCSNDDCKCGSQCTGSGSCKCGSACGCK 64
>gi|7516342|pir||H72593 hypothetical protein APE1217 - Aeropyrum pernix (strain
K1) >gi|5104892|dbj|BAA80206.1| (AP000061) 280aa long hypothetical
protein [Aeropyrum pernix]
Length = 280
Frame -2 hits (HSPs): ________________________________
__________________________________________________
Database sequence: | | | | | | | 280
0 50 100 150 200 250
Minus Strand HSPs:
Score = 91 (32.0 bits), Expect = 0.78, P = 0.54
Identities = 48/180 (26%), Positives = 86/180 (47%), Frame = -2
Query: 595 ITGASLTTDLSIISGTTCFSISTSETTTDGAASAADVWRGTGSS*ALLGTKRC-CSSSFE 419
++ +SLT ++S + SIST D + WR SS + C SS+
Sbjct: 61 LSTSSLTASTVLLSWPSLLSISTM----DCCRVSTSAWRLARSS-----VRACRLSSAVA 111
Query: 418 GIFPPADKSDSFFSLLLLSKA*VNIALASII----CGVDKIAASVL-LSLGCTSTKYIFQ 254
+ + ++ +S L+L + + A AS++ V +++ V+ LS+ ++ + +
Sbjct: 112 SLCWSCCRVEATWSSLVLRSSRLAWASASLVERSSSSVLRLSRLVVRLSISSSAWESLSS 171
Query: 253 KLPSLMYPGHSSILRAAKLGARCSTARACSCCASDKSKSSESSSSGRGKSSQVSGCKATL 74
LP+L + +LR ++ S+ARACSC S + E SS +S + ATL
Sbjct: 172 TLPTLASRSSTLLLRLSR-----SSARACSCWLI-ASTAPERSSREPSTASSLPSISATL 225
Query: 73 LAKATT 56
+ A T
Sbjct: 226 SSSAPT 231
>gi|6473880|dbj|BAA87194.1| (AB027890) Hypothetical protein
[Schizosaccharomyces pombe]
Length = 210
Frame -2 hits (HSPs): ________________________________
__________________________________________________
Database sequence: | | | | | | 210
0 50 100 150 200
Minus Strand HSPs:
Score = 70 (24.6 bits), Expect = 1.5, Sum P(2) = 0.79
Identities = 24/60 (40%), Positives = 32/60 (53%), Frame = -2
Query: 181 TARACSCCASDKSKSSESSSSGRGKSSQVSGCKATLLAKA--TTSSVTPRTPSRSCSSSD 8
T+ S +S S SS SSSS R SS S T+ + +T +VTP + S S SS
Sbjct: 76 TSSTSSSHSSSSSSSSSSSSSSRPSSS--SSFITTMSSSTFISTVTVTPSSSSSSTSSEV 133
Query: 7 PA 2
P+
Sbjct: 134 PS 135
Score = 52 (18.3 bits), Expect = 1.5, Sum P(2) = 0.79
Identities = 16/68 (23%), Positives = 33/68 (48%), Frame = -2
Query: 667 SASSS*VSSKNLLVEPDDDCSADEITGASLTTDLSIISGTTCFSISTSETTTDGAASAAD 488
S+SS SS P S+ + +S ++ S S ++ S S+S +++ ++S++
Sbjct: 5 SSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 64
Query: 487 VWRGTGSS 464
+ SS
Sbjct: 65 SSSSSSSS 72
Score = 47 (16.5 bits), Expect = 4.9, Sum P(2) = 0.99
Identities = 19/77 (24%), Positives = 36/77 (46%), Frame = -2
Query: 592 TGASLTTDLSIISGTTCFSISTSETTTDGAASAADVWRGTGSS*ALLGTKRCCSSSFEGI 413
T +S ++ S S TT S S+S +++ ++S++ + SS + + SSS
Sbjct: 1 TSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 60
Query: 412 FPPADKSDSFFSLLLLS 362
+ S S S+ + S
Sbjct: 61 SSSSSSSSSSSSVPITS 77
Score = 45 (15.8 bits), Expect = 7.7, Sum P(2) = 1.0
Identities = 15/61 (24%), Positives = 31/61 (50%), Frame = -2
Query: 607 SADEITGASLTTDLSIISGTTCFSISTSETTTDGAASAADVWRGTGSS*ALLGTKRCCSS 428
S+ + +S TT S S ++ S S+S +++ ++S++ + SS + + SS
Sbjct: 5 SSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 64
Query: 427 S 425
S
Sbjct: 65 S 65
Score = 45 (15.8 bits), Expect = 7.7, Sum P(2) = 1.0
Identities = 17/74 (22%), Positives = 33/74 (44%), Frame = -2
Query: 607 SADEITGASLTTDLSIISGTTCFSISTSETTTDGAASAADVWRGTGSS*ALLGTKRCCSS 428
S+ + + TT S S ++ S S+S +++ ++S++ + SS + + SS
Sbjct: 7 SSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 66
Query: 427 SFEGIFPPADKSDS 386
S P S S
Sbjct: 67 SSSSSSVPITSSTS 80
>gi|7413495|emb|CAB85689.1| (AJ271695) metallothionein [Agaricus bisporus]
Length = 71
Frame -2 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | 71
0 20 40 60
Minus Strand HSPs:
Score = 68 (23.9 bits), Expect = 1.8, P = 0.83
Identities = 17/42 (40%), Positives = 24/42 (57%), Frame = -2
Query: 208 AAKLGARCSTARACSCCASD---KSKSSESSSSGRGKSSQVSGCK 83
A+K G C+ A C CC+++ K++ SS G G S GCK
Sbjct: 24 ASKCGEACACANNCQCCSNNEVPKNQHCGMSSCGCGDSC---GCK 65
>gi|6321459 ref|NP_011537.1| acts in concert with Mid2p to transduce cell wall
stress signals; Mtl1p [Saccharomyces cerevisiae]
>gi|1723652|sp|P53214|YG1F_YEAST HYPOTHETICAL 57.5 KD PROTEIN IN
VMA7-RPS25A INTERGENIC REGION >gi|2132585|pir||S64314 probable
membrane protein YGR023w - yeast (Saccharomyces cerevisiae)
>gi|1322994|emb|CAA97006.1| (Z72807) ORF YGR023w [Saccharomyces
cerevisiae]
Length = 551
Frame -2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | 551
0 150 300 450
Minus Strand HSPs:
Score = 90 (31.7 bits), Expect = 2.8, P = 0.94
Identities = 58/222 (26%), Positives = 104/222 (46%), Frame = -2
Query: 667 SASSS*VSSKNLLVEPDD-DCSADEITGASLTTDLS-IISGTTCFSISTSETTTDGAASA 494
S SS +SS ++ V S+ E+T +S ++ +S S +T S S+S T A+++
Sbjct: 97 STLSSELSSSSMQVSSSSTSSSSSEVTSSSSSSSISPSSSSSTIISSSSSLPTFTVASTS 156
Query: 493 ADVWRGTGSS*ALLGTKRCCSSSFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGVD 314
+ V T S+ + L SS+F F S+S SL+ S + +++ +S+
Sbjct: 157 STVASSTLSTSSSLVISTS-SSTFT--F----SSESSSSLISSSIS-TSVSTSSVYVPSS 208
Query: 313 KIAASVLLSLGCTSTKYIFQKLPSLMYPGHSSILRAAKLGARCSTARACSCCASDKSKSS 134
++ S TS+ Y S ++ +SS ++ + S++ + S +S S +
Sbjct: 209 STSSPPSSSSELTSSSYSSSSSSSTLF-SYSSSFSSSSSSSSSSSSSSSSSSSSSSSYFT 267
Query: 133 ESSSSGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCSSS-DPA 2
S+SS SS S + +++S+ T S S SSS PA
Sbjct: 268 LSTSSS---SSIYSSSSYPSFSSSSSSNPTSSITSTSASSSITPA 309
Score = 89 (31.3 bits), Expect = 3.6, P = 0.97
Identities = 54/197 (27%), Positives = 94/197 (47%), Frame = -2
Query: 586 ASLTTDLSIISGTTCFSISTSETTTDGAASAADVWRGTGSS*ALLGTKRCCSSSFEGIFP 407
++L+++LS S S STS ++++ +S++ SS + + SSS F
Sbjct: 97 STLSSELSS-SSMQVSSSSTSSSSSEVTSSSSSSSISPSSSSSTI----ISSSSSLPTFT 151
Query: 406 PADKSDSFFSLLLLSKA*VNIALASIICGVDKIAASVLLSLGCT---STKYIFQKLPSLM 236
A S + S L + + + I+ +S ++S L+S + ST ++ S
Sbjct: 152 VASTSSTVASSTLSTSSSLVISTSSSTFTFSSESSSSLISSSISTSVSTSSVYVPSSSTS 211
Query: 235 YP-GHSSILRAAKLGARCSTARACSCCASDKSKSSESSSSGRGKSSQVSGCKATL-LAKA 62
P SS L ++ + S++ S +S S SS SSSS SS S + L+ +
Sbjct: 212 SPPSSSSELTSSSYSSSSSSSTLFSYSSSFSSSSSSSSSSSSSSSSSSSSSSSYFTLSTS 271
Query: 61 TTSSVTPRT--PS-RSCSSSDP 5
++SS+ + PS S SSS+P
Sbjct: 272 SSSSIYSSSSYPSFSSSSSSNP 293
>gi|12699454|gb|AAG47430.1| (AY011395) ATP7A [Muscardinus avellanarius]
Length = 199
Frame -2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | 199
0 50 100 150
Minus Strand HSPs:
Score = 83 (29.2 bits), Expect = 3.4, P = 0.97
Identities = 33/102 (32%), Positives = 52/102 (50%), Frame = -2
Query: 322 GVDKIAASVLLSLGCTS-TKYIFQKLPSLMYPGHSSILRAAKLGARCSTA--RACSCCAS 152
G+D A ++ + C S I L +L Y SSI A L +R +T ACS A
Sbjct: 36 GIDATATFIVDGMHCQSCVSNIESTLSALQYV--SSI--AVSLESRSATVTFNACSATAE 91
Query: 151 DKSKSSESSSSGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCS 17
SK+ E+ S G+ + S +S ++T +K+ +SS + P + S
Sbjct: 92 MLSKAIEAVSPGQYRVSLLSEAEST--SKSPSSSSLHKVPPKKVS 134
>gi|4505923 ref|NP_002678.1| pinin, desmosome associated protein [Homo sapiens]
>gi|1684847|gb|AAB48304.1| (U77718) pinin [Homo sapiens]
Length = 743
Frame -2 hits (HSPs): _____
Frame -3 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 743
0 150 300 450 600
Minus Strand HSPs:
Score = 85 (29.9 bits), Expect = 3.4, Sum P(2) = 0.97
Identities = 23/60 (38%), Positives = 34/60 (56%), Frame = -2
Query: 190 RCSTARACSCCASDKSKSSESSSSGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCSSS 11
R + +R+ S +S S SS SSSSG SS S +++ + ++TS + R S S SSS
Sbjct: 595 RTTKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSS 654
Score = 46 (16.2 bits), Expect = 3.4, Sum P(2) = 0.97
Identities = 17/53 (32%), Positives = 24/53 (45%), Frame = -3
Query: 549 QHVSPSQHQKQPQMGQLQQQMSGEVLVQVEHCLAQRDAVPPLLREYSLLQISQ 391
Q S Q Q QP+ Q Q Q ++ +Q + C A + PP E L + Q
Sbjct: 486 QSQSEPQPQLQPEPAQPQLQSQPQLQLQSQ-CHAVLQSHPPSQPEDLSLAVLQ 537
>gi|12723779|gb|AAK04950.1|AE006319_4 (AE006319) UNKNOWN PROTEIN [Lactococcus
lactis subsp. lactis]
Length = 1063
Frame -2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | || 1063
0 150 300 450 600 750 900 1050
Minus Strand HSPs:
Score = 92 (32.4 bits), Expect = 3.6, P = 0.97
Identities = 60/219 (27%), Positives = 96/219 (43%), Frame = -2
Query: 667 SASSS*VSSKNLLVEPDDDCSADEITGASLTTDLSIISGTTCFSISTSETTTDGAASAAD 488
SA+SS SS N+ + S++ T +S + S S + S S+S ++ AS++
Sbjct: 624 SAASSSTSSSNVSSNTSSN-SSEANTSSSTSNASSSSSSSEGSSASSSNSSESSVASSSS 682
Query: 487 VWRGTGSS*ALLGTKRCCSSSFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGVDKI 308
V SS G SSS EG A S+S S + S + V+ + +S GV+
Sbjct: 683 VDSSQSSS---AGVNSS-SSSAEG--SSASSSNSSESSVASSSS-VDSSQSSS-AGVNGS 734
Query: 307 AASVLLSLGCTSTKYIFQKLPSLMYPGHSSILRAAKLGARCSTARACSCCASDKSKSSES 128
++S S +S S S +A + + S+A S +S+ S+SS +
Sbjct: 735 SSSSESSSASSSNSSEGSVASSSSVDSSQS--SSAGVNSSSSSAEGSSASSSNSSESSIA 792
Query: 127 SSSGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCSSS 11
SSS G S S ++ + A SS + S S +S
Sbjct: 793 SSSSVGSSQSSSTGVSSSSSSAEGSSASSSNSSESSVAS 831
>gi|6323423 ref|NP_013495.1| Secretory Stress Response protein; Ssr1p
[Saccharomyces cerevisiae] >gi|7442005|pir||S77699 inner cell wall
mannoprotein ICWP - yeast (Saccharomyces cerevisiae)
>gi|2580460|gb|AAB82348.1| (U19729) Ylr391w-ap [Saccharomyces
cerevisiae]
Length = 238
Frame -2 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | | 238
0 50 100 150 200
Minus Strand HSPs:
Score = 84 (29.6 bits), Expect = 3.8, P = 0.98
Identities = 21/65 (32%), Positives = 35/65 (53%), Frame = -2
Query: 205 AKLGARCSTARACSCCASDKSKSSESSSSGRGKSSQVSGCKATLLAKATTSSVTPRTPSR 26
A LG S+A + + +S S S+++SSS S++ S A+ KA++SS P +
Sbjct: 88 ASLGDSSSSASSSASSSSKASSSTKASSSSASSSTKASSSSASSSTKASSSSAAPSSSKA 147
Query: 25 SCSSS 11
S + S
Sbjct: 148 SSTES 152
Score = 81 (28.5 bits), Expect = 8.4, P = 1.0
Identities = 37/135 (27%), Positives = 61/135 (45%), Frame = -2
Query: 388 SFFSLLLLSKA*VNIALASIICGVDKI--AASVLLSLG-----CTSTKYIFQKLPSLMYP 230
S SL LLSK + A ++ V ++ ++S SL C +K + P
Sbjct: 9 SVVSLALLSKEVLATPPACLLACVAQVGKSSSTCDSLNQVTCYCEHENSAVKKCLDSICP 68
Query: 229 GHSSILRAAKLGARCSTARACSCCASDKSKSSESSSSGRGKSSQVSGCKATLLAKATTSS 50
+ + + + CS A +S + SS SSSS S++ S A+ KA++SS
Sbjct: 69 NNDADAAYSAFKSSCSEQNASLGDSSSSASSSASSSSKASSSTKASSSSASSSTKASSSS 128
Query: 49 VTPRTPSRSCSSSDPA 2
+ T + S SS+ P+
Sbjct: 129 ASSSTKASS-SSAAPS 143
>gi|2497876|sp|Q27287|MTB_STRPU METALLOTHIONEIN-B (MTB) >gi|103664|pir||A38739
metallothionein - sea urchin (Strongylocentrotus purpuratus)
>gi|161536|gb|AAA30062.1| (M59822) metallothionein
[Strongylocentrotus purpuratus] >gi|161538|gb|AAA30063.1| (M15989)
metallothionein [Strongylocentrotus purpuratus]
Length = 65
Frame 2 hits (HSPs): ____________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 65
0 20 40 60
__________________
Annotated Domains:
PRINTS MTECHINOIDEA1: Sea-urchin metallothionei 2..17
PRINTS MTECHINOIDEA2: Sea-urchin metallothionei 19..32
PRINTS MTECHINOIDEA3: Sea-urchin metallothionei 34..44
PRINTS MTECHINOIDEA4: Sea-urchin metallothionei 46..64
PRODOM PD000782: MT(23) MT1(12) MT2(11) 5..64
__________________
Plus Strand HSPs:
Score = 65 (22.9 bits), Expect = 3.8, P = 0.98
Identities = 16/46 (34%), Positives = 18/46 (39%), Frame = +2
Query: 422 KRGGTASLCAKQCST*TSTSPD-ICC*SCPICGCF*C*DGETCCSG 556
K G + + C T D CC C C C DG TC SG
Sbjct: 10 KEGNECACTGQDCCTIGKCCKDGTCCGKCSNAACKTCADGCTCGSG 55
>gi|6753660 ref|NP_034197.1| DNA methyltransferase 2 [Mus musculus]
>gi|2627433|gb|AAC53529.1| (AF012129) putative DNA
methyltransferase [Mus musculus]
Length = 415
Frame 3 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | 415
0 150 300
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 4.2, P = 0.98
Identities = 41/150 (27%), Positives = 62/150 (41%), Frame = +3
Query: 231 GYMSDGNFWKIYFVL-VHPRLSKTDAAILSTP----QIMEARAMLTQALDKRSKEKKESD 395
G M+D ++L + PRL K IL ++ R +L Q ++ + +E
Sbjct: 89 GDMTDPRTTSFLYILDILPRLQKLPKYILLENVKGFEVSSTRGLLIQTIEACGFQYQEFL 148
Query: 396 LSAGG-NIPSKEEEQHLFVPSNAQLEPVPLQTSAAEAAPSVVVSDVEMEKHVVPEIIDKS 572
LS IP+ F+ + Q EP P Q + VE +K+ V E
Sbjct: 149 LSPSSLGIPNSR--LRYFLIAKLQSEPFPFQAPGQILMEFPKIVTVEPQKYAVVEESQPR 206
Query: 573 VVKEAPVI---SSAEQSSSGSTNRFLDETYDD 659
V + P I SS+ QSS T F ET ++
Sbjct: 207 VQRTGPRICAESSSTQSSGKDTILFKLETVEE 238
>gi|1363798|pir||S59310 probable membrane protein YMR317w - yeast
(Saccharomyces cerevisiae)
Length = 1104
Frame -2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | | | 1104
0 150 300 450 600 750 900 1050
Minus Strand HSPs:
Score = 91 (32.0 bits), Expect = 4.9, P = 0.99
Identities = 57/222 (25%), Positives = 92/222 (41%), Frame = -2
Query: 667 SASSS*VSSKNLL-VEPDDDCSADEITGASLTTDLSIISGTT-CFSISTSETTTDGAASA 494
S +SS +SS ++ VE ++ + S +T+ + S TT SIS+S T ++
Sbjct: 94 SYTSSDISSTSVNDVESSTSGPSNSYSALS-STNAQLSSSTTETDSISSSAIQTSSPQTS 152
Query: 493 ADVWRGTGSS*ALLGTKRCCSSSFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGVD 314
+ G GSS LG ++ A S +F +L +S + + S + V
Sbjct: 153 SS--NGGGSSSEPLGKSSVLETTASSSDTTAVTSSTFTTLTDVSSSPKISSSGSAVTSVG 210
Query: 313 KIAASVLLSLGCTSTKYIFQKLPSLMYPGHSSILRAAKLGARCS--TARACSCCASDKSK 140
+ + +ST + L S P S+I + T+ S A +
Sbjct: 211 T-TSDASKEVFSSSTSDVSSLLSSTSSPASSTISETLPFSSTILSITSSPVSSEAPSATS 269
Query: 139 SSESSSSGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCSSSDPA 2
SS SS + SS VS +A L + SS P + S SS P+
Sbjct: 270 SSVSSEASSSTSSSVSS-EAPLATSSVVSSEAPSSTSSVVSSEAPS 314
>gi|1903029|emb|CAA72652.1| (Y11902) hypothetical protein [Brevibacterium
linens]
Length = 88
Frame -2 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | | 88
0 20 40 60 80
Minus Strand HSPs:
Score = 64 (22.5 bits), Expect = 5.0, P = 0.99
Identities = 22/73 (30%), Positives = 35/73 (47%), Frame = -2
Query: 214 LRAAKLGARCSTA-RACSCCASDKSKSSESSSSGRGKSSQVSGCKATLLAKATT---SSV 47
+R+ L TA A SC A+ S S+ + +VS + A+T S+V
Sbjct: 1 MRSLSLSCWSRTALSAASCLAASVDHFSASALASASSFLRVSAWVVAVSRSASTVSTSAV 60
Query: 46 TPRTPSRSCSSSD 8
+P T +RS S+S+
Sbjct: 61 SPSTSTRSASTSE 73
>gi|6323978 ref|NP_014050.1| Ymr317wp [Saccharomyces cerevisiae]
>gi|2497227|sp|Q04893|YM96_YEAST HYPOTHETICAL 113.1 KD PROTEIN IN
PRE5-FET4 INTERGENIC REGION >gi|1072409|emb|CAA90835.1| (Z54141)
unknown [Saccharomyces cerevisiae]
Length = 1140
Frame -2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | | | | 1140
0 150 300 450 600 750 900 1050
Minus Strand HSPs:
Score = 91 (32.0 bits), Expect = 5.1, P = 0.99
Identities = 57/222 (25%), Positives = 92/222 (41%), Frame = -2
Query: 667 SASSS*VSSKNLL-VEPDDDCSADEITGASLTTDLSIISGTT-CFSISTSETTTDGAASA 494
S +SS +SS ++ VE ++ + S +T+ + S TT SIS+S T ++
Sbjct: 94 SYTSSDISSTSVNDVESSTSGPSNSYSALS-STNAQLSSSTTETDSISSSAIQTSSPQTS 152
Query: 493 ADVWRGTGSS*ALLGTKRCCSSSFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGVD 314
+ G GSS LG ++ A S +F +L +S + + S + V
Sbjct: 153 SS--NGGGSSSEPLGKSSVLETTASSSDTTAVTSSTFTTLTDVSSSPKISSSGSAVTSVG 210
Query: 313 KIAASVLLSLGCTSTKYIFQKLPSLMYPGHSSILRAAKLGARCS--TARACSCCASDKSK 140
+ + +ST + L S P S+I + T+ S A +
Sbjct: 211 T-TSDASKEVFSSSTSDVSSLLSSTSSPASSTISETLPFSSTILSITSSPVSSEAPSATS 269
Query: 139 SSESSSSGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCSSSDPA 2
SS SS + SS VS +A L + SS P + S SS P+
Sbjct: 270 SSVSSEASSSTSSSVSS-EAPLATSSVVSSEAPSSTSSVVSSEAPS 314
>gi|6322611 ref|NP_012685.1| Yjr151cp [Saccharomyces cerevisiae]
>gi|1352944|sp|P47179|YJ9P_YEAST HYPOTHETICAL 118.4 KD PROTEIN IN
BAT2-DAL5 INTERGENIC REGION PRECURSOR >gi|1078284|pir||S57180
probable membrane protein YJR151c - yeast (Saccharomyces
cerevisiae) >gi|1015903|emb|CAA89684.1| (Z49651) ORF YJR151c
[Saccharomyces cerevisiae]
Length = 1161
Frame -2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | | | | 1161
0 150 300 450 600 750 900 1050
Minus Strand HSPs:
Score = 91 (32.0 bits), Expect = 5.2, P = 0.99
Identities = 46/200 (23%), Positives = 72/200 (36%), Frame = -2
Query: 592 TGASLTTDLSIISGTTCFSISTSETTTDGAASAADVWRGTGSS*ALLGTKRCCSSSFEGI 413
T + TT + + TT + +TS T+T S T S+ T ++S
Sbjct: 212 TSTTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTTPTTSSTSTTPTTSTTPTTSTTST 271
Query: 412 FPPADKSDSFFSLLLLSKA*VNIALASIICGVDKIAASVLLSLGCTSTKYIFQKLP--SL 239
P + + + +S A +S A+SV+ + TST + P S
Sbjct: 272 APTTSTTSTTSTTSTISTAPTTSTTSSTFSTSSASASSVISTTATTSTTFASLTTPATST 331
Query: 238 MYPGH--SSILRAAKLGARCSTARACSCCASDKSKSSESSSSGRGKSSQVSGCKATLLAK 65
H SS+ +T S S S +SS+ S+V+ +
Sbjct: 332 ASTDHTTSSVSTTNAFTTSATTTTTSDTYISSSSPSQVTSSAEPTTVSEVTSSVEPTRSS 391
Query: 64 ATTSSVTPRTPSRSCSSSDP 5
TSS P T S SS +P
Sbjct: 392 QVTSSAEPTTVSEFTSSVEP 411
>gi|7294192|gb|AAF49545.1| (AE003528) CG13075 gene product [Drosophila
melanogaster]
Length = 339
Frame -2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 339
0 150 300
Minus Strand HSPs:
Score = 85 (29.9 bits), Expect = 5.2, P = 0.99
Identities = 22/59 (37%), Positives = 31/59 (52%), Frame = -2
Query: 187 CSTARACSCCASDKSKSSESSSSGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCSSS 11
C T R SC SD + S S SS S++ S ++ A +T SS T TP+ + SS+
Sbjct: 243 CVTTRPTSC--SDTTTQSPSDSSSTASSTESSSESSSTTASSTASSSTESTPTTASSSA 299
Score = 83 (29.2 bits), Expect = 8.8, P = 1.0
Identities = 25/60 (41%), Positives = 31/60 (51%), Frame = -2
Query: 187 CSTARACSCCASDKSKSSESSS--SGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCSS 14
C T R SC + S+SSS S SS+ S A+ A ++T S TP T S S SS
Sbjct: 243 CVTTRPTSCSDTTTQSPSDSSSTASSTESSSESSSTTASSTASSSTES-TPTTASSSASS 301
Query: 13 S 11
S
Sbjct: 302 S 302
>gi|12718496|emb|CAC28825.1| (AL513466) related to a-agglutinin core protein
AGA1 [Neurospora crassa]
Length = 513
Frame -2 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | 513
0 150 300 450
Minus Strand HSPs:
Score = 87 (30.6 bits), Expect = 5.5, P = 1.0
Identities = 48/200 (24%), Positives = 86/200 (43%), Frame = -2
Query: 607 SADEITGASLTTDLSIISGTTCFSISTSE-TTTDGAASAADVWRGTGSS*ALLGTKRCCS 431
S+ + T +S + S S ++ S+ T E +TT A T S+ + + T +
Sbjct: 174 SSAQATSSSSSAQQSTTSSSSS-SVPTPEPSTTTQAPPVTITTTSTTSTTSTIPTTTSTT 232
Query: 430 S--SFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGVDKIAASVLLSLGCTSTKYIF 257
S S P A S + S+ + V I+ +S V A+SV S +S +
Sbjct: 233 SIKSTSSSAPQASPSSTGTSVSESERTLVLISTSSSASSVSSSASSVSSSEP-SSEAGVS 291
Query: 256 QKLPSLMYPGHSSILRAAKLGARCSTARACSCCASDKSKSSESSSSGRGKSSQVSGCKAT 77
S +S ++ L S+ + +SD S +++S ++ SG +T
Sbjct: 292 STTSSSSGSSSTSSRSSSSLEPSSSSTSPTTTSSSDVVSSVSTTASSTSATTISSGSSST 351
Query: 76 LLAKATTSSVTPRTPSRSCSSS 11
+++AT+SS+T T +SS
Sbjct: 352 SISRATSSSITSSTSQEVTASS 373
>gi|1280376|gb|AAA98236.1| (L41872) antifungal protein [Ipomoea nil]
>gi|1280378|gb|AAA98237.1| (L41871) antifungal protein [Ipomoea
nil]
Length = 92
Frame -2 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | | 92
0 20 40 60 80
Minus Strand HSPs:
Score = 66 (23.2 bits), Expect = 6.0, P = 1.0
Identities = 28/93 (30%), Positives = 44/93 (47%), Frame = -2
Query: 280 CTSTKYIFQKLPSLMYPGHSSILRAAKLGARCSTARACS---CCASDKSKSSESSSSGRG 110
CT + L+ P S + A + G++ + R C CC+ S ++ G G
Sbjct: 4 CTMFLVVLALASLLLTP---STIMAQQCGSQ-ARGRLCGNGLCCSQWGYCGSTAAYCGAG 59
Query: 109 KSSQVSGCKATLLAKATTSSVTPRTPSRSCSSSDPA 2
SQ CK+T A + T + T T ++S + SDPA
Sbjct: 60 CQSQ---CKST--AASATDTTT--TANQSTAKSDPA 88
>gi|3986293|dbj|BAA34997.1| (AB018417) PFLAE-5'ORF [Streptococcus mutans]
Length = 73
Frame 3 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | 73
0 20 40 60
Plus Strand HSPs:
Score = 63 (22.2 bits), Expect = 6.4, P = 1.0
Identities = 19/50 (38%), Positives = 29/50 (58%), Frame = +3
Query: 396 LSAGGNIPSKEEEQHLFVPSNAQ-LEPVPLQTSAAEAAP-SVVVSDVEMEK 542
L+ G IPS+EE++H V SN + LE + + ++VS+VE EK
Sbjct: 19 LTGVGTIPSQEEKEHFEVESNGKHLELINDKVKDGRVTKLKILVSEVE-EK 68
>gi|7300120|gb|AAF55288.1| (AE003712) tara gene product [Drosophila
melanogaster]
Length = 904
Frame -2 hits (HSPs): _____
Frame -3 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | || 904
0 150 300 450 600 750 900
Minus Strand HSPs:
Score = 76 (26.8 bits), Expect = 6.6, Sum P(2) = 1.0
Identities = 22/77 (28%), Positives = 36/77 (46%), Frame = -2
Query: 232 PGHSSILRAAKLGARCSTARACSCCASDKSKS--SESSSSGRGKSSQVSGCKATLLAKAT 59
P ++ AA A S+ A + +S+ S S S S+SS S+ +S ++
Sbjct: 645 PTTTAAAAAASAAAAASSGGAATTLSSNISSSPASSSTSSNTTSSTVISSSSGNTVSSNG 704
Query: 58 TSSVTPRTPSRSCSSSD 8
T+ V P S +C +SD
Sbjct: 705 TTPVAPTASSSNCDTSD 721
Score = 55 (19.4 bits), Expect = 6.6, Sum P(2) = 1.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Frame = -3
Query: 555 PEQHVSPSQ-HQKQPQ-MGQLQQQMSGEVLVQVE--HCLAQRDAVP 430
P H PS HQ+QPQ + Q Q + L Q + H QR P
Sbjct: 229 PHSHQLPSHPHQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAP 274
>gi|7230585|gb|AAF43018.1|AF227212_1 (AF227212) Tara 1B isoform [Drosophila
melanogaster]
Length = 912
Frame -2 hits (HSPs): _____
Frame -3 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | || 912
0 150 300 450 600 750 900
Minus Strand HSPs:
Score = 76 (26.8 bits), Expect = 6.7, Sum P(2) = 1.0
Identities = 22/77 (28%), Positives = 36/77 (46%), Frame = -2
Query: 232 PGHSSILRAAKLGARCSTARACSCCASDKSKS--SESSSSGRGKSSQVSGCKATLLAKAT 59
P ++ AA A S+ A + +S+ S S S S+SS S+ +S ++
Sbjct: 653 PTTTAAAAAASAAAAASSGGAATTLSSNISSSPASSSTSSNTTSSTVISSSSGNTVSSNG 712
Query: 58 TSSVTPRTPSRSCSSSD 8
T+ V P S +C +SD
Sbjct: 713 TTPVAPTASSSNCDTSD 729
Score = 55 (19.4 bits), Expect = 6.7, Sum P(2) = 1.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Frame = -3
Query: 555 PEQHVSPSQ-HQKQPQ-MGQLQQQMSGEVLVQVE--HCLAQRDAVP 430
P H PS HQ+QPQ + Q Q + L Q + H QR P
Sbjct: 237 PHSHQLPSHPHQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAP 282
>gi|7230588|gb|AAF43020.1| (AF227213) Tara 1B isoform [Drosophila melanogaster]
Length = 912
Frame -2 hits (HSPs): _____
Frame -3 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | || 912
0 150 300 450 600 750 900
Minus Strand HSPs:
Score = 76 (26.8 bits), Expect = 6.7, Sum P(2) = 1.0
Identities = 22/77 (28%), Positives = 36/77 (46%), Frame = -2
Query: 232 PGHSSILRAAKLGARCSTARACSCCASDKSKS--SESSSSGRGKSSQVSGCKATLLAKAT 59
P ++ AA A S+ A + +S+ S S S S+SS S+ +S ++
Sbjct: 653 PTTTAAAAAASAAAAASSGGAATTLSSNISSSPASSSTSSNTTSSTVISSSSGNTVSSNG 712
Query: 58 TSSVTPRTPSRSCSSSD 8
T+ V P S +C +SD
Sbjct: 713 TTPVAPTASSSNCDTSD 729
Score = 55 (19.4 bits), Expect = 6.7, Sum P(2) = 1.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Frame = -3
Query: 555 PEQHVSPSQ-HQKQPQ-MGQLQQQMSGEVLVQVE--HCLAQRDAVP 430
P H PS HQ+QPQ + Q Q + L Q + H QR P
Sbjct: 237 PHSHQLPSHPHQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAP 282
>gi|7230583|gb|AAF43017.1|AF227211_1 (AF227211) Tara 1A isoform [Drosophila
melanogaster]
Length = 916
Frame -2 hits (HSPs): _____
Frame -3 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | || 916
0 150 300 450 600 750 900
Minus Strand HSPs:
Score = 76 (26.8 bits), Expect = 6.8, Sum P(2) = 1.0
Identities = 22/77 (28%), Positives = 36/77 (46%), Frame = -2
Query: 232 PGHSSILRAAKLGARCSTARACSCCASDKSKS--SESSSSGRGKSSQVSGCKATLLAKAT 59
P ++ AA A S+ A + +S+ S S S S+SS S+ +S ++
Sbjct: 657 PTTTAAAAAASAAAAASSGGAATTLSSNISSSPASSSTSSNTTSSTVISSSSGNTVSSNG 716
Query: 58 TSSVTPRTPSRSCSSSD 8
T+ V P S +C +SD
Sbjct: 717 TTPVAPTASSSNCDTSD 733
Score = 55 (19.4 bits), Expect = 6.8, Sum P(2) = 1.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Frame = -3
Query: 555 PEQHVSPSQ-HQKQPQ-MGQLQQQMSGEVLVQVE--HCLAQRDAVP 430
P H PS HQ+QPQ + Q Q + L Q + H QR P
Sbjct: 241 PHSHQLPSHPHQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAP 286
>gi|7230587|gb|AAF43019.1| (AF227213) Tara 1A isoform [Drosophila melanogaster]
Length = 916
Frame -2 hits (HSPs): _____
Frame -3 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | || 916
0 150 300 450 600 750 900
Minus Strand HSPs:
Score = 76 (26.8 bits), Expect = 6.8, Sum P(2) = 1.0
Identities = 22/77 (28%), Positives = 36/77 (46%), Frame = -2
Query: 232 PGHSSILRAAKLGARCSTARACSCCASDKSKS--SESSSSGRGKSSQVSGCKATLLAKAT 59
P ++ AA A S+ A + +S+ S S S S+SS S+ +S ++
Sbjct: 657 PTTTAAAAAASAAAAASSGGAATTLSSNISSSPASSSTSSNTTSSTVISSSSGNTVSSNG 716
Query: 58 TSSVTPRTPSRSCSSSD 8
T+ V P S +C +SD
Sbjct: 717 TTPVAPTASSSNCDTSD 733
Score = 55 (19.4 bits), Expect = 6.8, Sum P(2) = 1.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Frame = -3
Query: 555 PEQHVSPSQ-HQKQPQ-MGQLQQQMSGEVLVQVE--HCLAQRDAVP 430
P H PS HQ+QPQ + Q Q + L Q + H QR P
Sbjct: 241 PHSHQLPSHPHQQQPQQLSQQQPHPQQQQLAQQQQQHPQQQRSYAP 286
>gi|6324584 ref|NP_014653.1| induced by cold shock; Tir2p [Saccharomyces
cerevisiae] >gi|464887|sp|P33890|TIR2_YEAST COLD SHOCK INDUCED
PROTEIN TIR2 PRECURSOR (SERINE-RICH PROTEIN 2)
>gi|2119747|pir||S61310 cold shock protein TIR2 precursor - yeast
(Saccharomyces cerevisiae) >gi|388098|gb|AAA92869.1| (L23521) TIR2
[Saccharomyces cerevisiae] >gi|1151006|gb|AAC49490.1| (U43491) cold
shock induced protein precursor [Saccharomyces cerevisiae]
>gi|1420106|emb|CAA99198.1| (Z74918) ORF YOR010c [Saccharomyces
cerevisiae]
Length = 251
Frame -2 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | || 251
0 50 100 150 200 250
Minus Strand HSPs:
Score = 82 (28.9 bits), Expect = 7.0, P = 1.0
Identities = 40/143 (27%), Positives = 65/143 (45%), Frame = -2
Query: 403 ADKSDSFFSLLLLSKA*VNIALA----------SIICGVDKIAASVLLSLGCTSTKYIFQ 254
A+ S S FSL L ++I LA ++ VD A S +L++ + +
Sbjct: 45 AEDSSSGFSLSSLPSGVLDIGLALASATDDSYTTLYSEVDFAAVSKMLTMVPWYSSRLLP 104
Query: 253 KLPSLMYPGHSSILRAAKLGARCSTARACSC--CASDKSKSSESSSSGRGKSSQVSGCKA 80
+L SL+ ++ A S+A A S +S + SSE++SS SS+ S A
Sbjct: 105 ELESLLGTSTTAASSTEASSAATSSAVASSSETTSSAVASSSEATSSAVASSSEASSSAA 164
Query: 79 TLLAKATTSSVTPRTPSRSCSSS 11
T A A++S T T + S ++
Sbjct: 165 TSSAVASSSEATSSTVASSTKAA 187
>gi|639900|gb|AAA66489.1| (L27629) ORF2 [Pseudomonas aeruginosa]
Length = 119
Frame -2 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | 119
0 50 100
Minus Strand HSPs:
Score = 74 (26.0 bits), Expect = 7.0, P = 1.0
Identities = 24/76 (31%), Positives = 37/76 (48%), Frame = -2
Query: 256 QKLPSLMYPGHSSILRAAKLGARCSTARACSCCASDKSKSSESSSSGRGKS-SQVSGCKA 80
Q L S PG +SI A GA A C C + + SS ++ + RG+ +V+G +
Sbjct: 3 QVLLSSKPPGLNSIDHAEPAGAPALEAAGCHCPGAVPTASSHATRANRGEPRDRVAGARC 62
Query: 79 TLLAKATTSSVTPRTPS 29
A +T + P +PS
Sbjct: 63 DF-ALSTGVRLAPLSPS 78
>gi|7522370|pir||T40374 hypothetical protein SPBC3D6.14c - fission yeast
(Schizosaccharomyces pombe) (fragment) >gi|2117310|emb|CAB09116.1|
(Z95620) hypothetical protein [Schizosaccharomyces pombe]
Length = 309
Frame -2 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | | | | 309
0 50 100 150 200 250 300
Minus Strand HSPs:
Score = 83 (29.2 bits), Expect = 7.6, P = 1.0
Identities = 31/110 (28%), Positives = 48/110 (43%), Frame = -2
Query: 334 SIICGVDKIAASVLLSLGCTSTKYIFQKLPSLMYPGHSSILRAAKLGARCSTARACSCCA 155
S++CG D + L G T + S SS + + +T + S +
Sbjct: 39 SLMCGGDLYWSVYLTGNGVLQTTVSSSSVSSTTSSSSSS----SPSSSSTTTTTSPSSSS 94
Query: 154 SDKSKSSESSSSGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCSSSDP 5
S S SS SSSS SS S ++ + +++SS + + S S SSS P
Sbjct: 95 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVP 144
Score = 70 (24.6 bits), Expect = 7.9, Sum P(2) = 1.0
Identities = 24/60 (40%), Positives = 32/60 (53%), Frame = -2
Query: 181 TARACSCCASDKSKSSESSSSGRGKSSQVSGCKATLLAKA--TTSSVTPRTPSRSCSSSD 8
T+ S +S S SS SSSS R SS S T+ + +T +VTP + S S SS
Sbjct: 146 TSSTSSSHSSSSSSSSSSSSSSRPSSS--SSFITTMSSSTFISTVTVTPSSSSSSTSSEV 203
Query: 7 PA 2
P+
Sbjct: 204 PS 205
Score = 50 (17.6 bits), Expect = 7.9, Sum P(2) = 1.0
Identities = 20/82 (24%), Positives = 37/82 (45%), Frame = -2
Query: 607 SADEITGASLTTDLSIISGTTCFSISTSETTTDGAASAADVWRGTGSS*ALLGTKRCCSS 428
S T +S ++ S S TT S S+S +++ ++S++ + SS + + SS
Sbjct: 66 SVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 125
Query: 427 SFEGIFPPADKSDSFFSLLLLS 362
S + S S S+ + S
Sbjct: 126 SSSSSSSSSSSSSSSSSVPITS 147
Score = 50 (17.6 bits), Expect = 7.9, Sum P(2) = 1.0
Identities = 23/94 (24%), Positives = 40/94 (42%), Frame = -2
Query: 667 SASSS*VSSKNLLVEPDDDCSADEITGASLTTDLSIISGTTCFSISTSETTTDGAASAAD 488
+ SSS VSS S+ T S ++ S S ++ S S+S +++ ++S++
Sbjct: 61 TVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 120
Query: 487 VWRGTGSS*ALLGTKRCCSSSFEGIFPPADKSDS 386
+ SS + + SSS I S S
Sbjct: 121 SSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHS 154
>gi|7491580|pir||T40167 hypothetical protein SPBC30B4.01c - fission yeast
(Schizosaccharomyces pombe) (fragment) >gi|3417427|emb|CAA20314.1|
(AL031262) putative glucoamylase [Schizosaccharomyces pombe]
Length = 344
Frame -2 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | 344
0 150 300
Minus Strand HSPs:
Score = 83 (29.2 bits), Expect = 9.0, P = 1.0
Identities = 31/110 (28%), Positives = 48/110 (43%), Frame = -2
Query: 334 SIICGVDKIAASVLLSLGCTSTKYIFQKLPSLMYPGHSSILRAAKLGARCSTARACSCCA 155
S++CG D + L G T + S SS + + +T + S +
Sbjct: 74 SLMCGGDLYWSVYLTGNGVLQTTVSSSSVSSTTSSSSSS----SPSSSSTTTTTSPSSSS 129
Query: 154 SDKSKSSESSSSGRGKSSQVSGCKATLLAKATTSSVTPRTPSRSCSSSDP 5
S S SS SSSS SS S ++ + +++SS + + S S SSS P
Sbjct: 130 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVP 179
>gi|1177622|emb|CAA61860.1| (X89715) AOF1001 [Saccharomyces cerevisiae]
Length = 1001
Frame -2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | | 1001
0 150 300 450 600 750 900
Minus Strand HSPs:
Score = 88 (31.0 bits), Expect = 9.5, P = 1.0
Identities = 54/218 (24%), Positives = 95/218 (43%), Frame = -2
Query: 667 SASSS*VSSKNLLVEPDDDCSAD--EITGASLTTDLSIISGTTCFSISTSETTTDGAASA 494
S+ S +SS L D S+ E+T +S SI T+ +S+S T++ + S
Sbjct: 44 SSGSVSISSSIELTSSTSDVSSSLTELTSSSTEVSSSIAPSTSSSEVSSSITSSGSSVSG 103
Query: 493 ADVWRGTGSS*ALLGTKRCCSSSFEGIFPPADKSDSFFSLLLLSKA*VNIALASIICGVD 314
+ +GSS + + SS G + ++S S+ S + + + ++ G
Sbjct: 104 SSSITSSGSSVSSSSSATESGSSASG---SSSATESGSSVSGSSTSITSGSSSATESGSS 160
Query: 313 KIAASVLLSLGCTSTKYIFQKLPSLMYPGHSSILRAAKLGARCSTARACSCCASDKSKSS 134
+S ++ G +S + S+ G +S + + S+A AS S ++
Sbjct: 161 VSGSSTSITSGSSSAT---ESGSSVS--GSTSATESGSSASGSSSATESGSSASGSSSAT 215
Query: 133 ESSSSGRGKSS------QVSGCKATLLAKATTSSVTPRTPSRSCSS 14
ES SS G SS VSG + + ++ S + T S S SS
Sbjct: 216 ESGSSVSGSSSATESGSSVSGSSSATESGSSVSGSSSATESGSASS 261
>gi|11545755 ref|NP_071333.1| SCAN domain-containing 2 [Homo sapiens]
>gi|11320940|gb|AAG33966.1|AF229246_1 (AF229246) SCAND2 [Homo
sapiens] >gi|11345048|gb|AAG34567.1|AF244812_1 (AF244812) SCAN
domain-containing protein 2 [Homo sapiens]
Length = 306
Frame -2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | | 306
0 50 100 150 200 250 300
Minus Strand HSPs:
Score = 82 (28.9 bits), Expect = 9.7, P = 1.0
Identities = 24/67 (35%), Positives = 37/67 (55%), Frame = -2
Query: 229 GHSSILRAAKLGARCSTA-RACSCCASDKSKSSESSSSGR-GKSSQVSGCKATLLAKATT 56
G +S RA++ G+ S A R +CCA+ + S+ S+S R G+S+ S C A + T
Sbjct: 157 GPASRARASETGSTASCAGRWRTCCAAAAAPSAARSASARTGRST--SSCARAARAPSAT 214
Query: 55 SSVTPRTPS 29
RTP+
Sbjct: 215 EGALTRTPA 223
>gi|12738870 ref|XP_012410.1| SCAN domain-containing 2 [Homo sapiens]
Length = 306
Frame -2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | | 306
0 50 100 150 200 250 300
Minus Strand HSPs:
Score = 82 (28.9 bits), Expect = 9.7, P = 1.0
Identities = 24/67 (35%), Positives = 37/67 (55%), Frame = -2
Query: 229 GHSSILRAAKLGARCSTA-RACSCCASDKSKSSESSSSGR-GKSSQVSGCKATLLAKATT 56
G +S RA++ G+ S A R +CCA+ + S+ S+S R G+S+ S C A + T
Sbjct: 157 GPASRARASETGSTASCAGRWRTCCAAAAAPSAARSASARTGRST--SSCARAARAPSAT 214
Query: 55 SSVTPRTPS 29
RTP+
Sbjct: 215 EGALTRTPA 223
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.95
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.311 0.128 0.357 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.381 0.172 0.750
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.349 0.153 0.553
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.353 0.156 0.571
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.320 0.128 0.370
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.345 0.150 0.514
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 222 222 10. 77 3 12 23 0.092 36
32 0.12 38
+2 0 222 222 10. 77 3 12 22 0.11 35
32 0.12 38
+1 0 222 222 10. 77 3 12 22 0.11 35
32 0.12 38
-1 0 222 222 10. 77 3 12 22 0.11 35
32 0.12 38
-2 0 222 222 10. 77 3 12 22 0.11 35
32 0.12 38
-3 0 222 222 10. 77 3 12 22 0.11 35
32 0.12 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 43
No. of states in DFA: 596 (59 KB)
Total size of DFA: 247 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 238.63u 1.03s 239.66t Elapsed: 00:00:48
Total cpu time: 238.71u 1.07s 239.78t Elapsed: 00:00:49
Start: Wed Jan 23 16:20:54 2002 End: Wed Jan 23 16:21:43 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000