| [213001-213068 (1-68)] |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 213001 | hypothetical | YKCD1p01 | transposase | genbank | 31795263 | NP_857716.1 | 340 | 87 | 1109 | |
| 213002 | hypothetical | YKCD1p02 | transposase | genbank | 31795274 | NP_857717.1 | 259 | 1109 | 1888 | |
| 213003 | lcrT | hypothetical | YKCD1p03 | transposase | genbank | 31795285 | NP_857718.1 | 134 | 1939 | 2343 |
| 213004 | lcrS | hypothetical | YKCD1p04 | putative IS element protein similar to low calcium response locus protein S | genbank | 31795296 | NP_857719.1 | 88 | 2379 | 2645 |
| 213005 | lcrQ | hypothetical | YKCD1p05 | LCR negative regulator similar to Yop proteins translocation protein M | genbank | 31795303 | NP_857720.1 | 115 | 3193 | 3540 |
| 213006 | yscL | hypothetical | YKCD1p06 | needle complex assembly protein type III secretion apparatus component; similar to Yop proteins translocation protein L | genbank | 31795313 | NP_857721.1 | 221 | 3765 | 4430 |
| 213007 | yscK | hypothetical | YKCD1p07 | type III secretion apparatus component similar to Yop proteins translocation protein K | genbank | 31795322 | NP_857722.1 | 209 | 4376 | 5005 |
| 213008 | yscJ | hypothetical | YKCD1p08 | needle complex inner membrane lipoprotein similar to Yop proteins translocation lipoprotein J | genbank | 31795324 | NP_857723.1 | 244 | 5005 | 5739 |
| 213009 | yscI | hypothetical | YKCD1p09 | type III secretion apparatus component similar to Yop proteins translocation protein I | genbank | 31795325 | NP_857724.1 | 115 | 5746 | 6093 |
| 213010 | yscH | hypothetical | YKCD1p10 | secreted effector protein similar to Yop proteins translocation protein H | genbank | 31795264 | NP_857725.1 | 165 | 6094 | 6591 |
| 213011 | yscG | hypothetical | YKCD1p11 | type III secretion apparatus component similar to Yop proteins translocation protein G | genbank | 31795265 | NP_857726.1 | 115 | 6588 | 6935 |
| 213012 | yscF | hypothetical | YKCD1p12 | needle complex major subunit type III secretion apparatus component; similar to Yop proteins translocation protein F | genbank | 31795266 | NP_857727.1 | 87 | 6937 | 7200 |
| 213013 | yscE | hypothetical | YKCD1p13 | type III secretion apparatus component similar to Yop proteins translocation protein E | genbank | 31795267 | NP_857728.1 | 66 | 7201 | 7401 |
| 213014 | yscD | hypothetical | YKCD1p14 | virulence protein type III secretion apparatus component; similar to Yop proteins translocation protein D | genbank | 31795268 | NP_857729.1 | 419 | 7398 | 8657 |
| 213015 | yscC | hypothetical | YKCD1p15 | outer membrane secretin precursor forms ring-shaped structure in outer membrane; similar to Yop proteins translocation protein C | genbank | 31795269 | NP_857730.1 | 607 | 8654 | 10477 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 213016 | yscB | hypothetical | YKCD1p16 | type III secretion apparatus component similar to Yop proteins translocation protein B | genbank | 31795270 | NP_857731.1 | 137 | 10483 | 10896 |
| 213017 | yscA | hypothetical | YKCD1p17 | translocation protein A similar to Yop proteins translocation protein A | genbank | 31795326 | NP_857732.1 | 32 | 11122 | 11220 |
| 213018 | lcrF | hypothetical | YKCD1p18 | transcriptional regulator LCR activator; thermoregulatory transcription facto | genbank | 31795271 | NP_857733.1 | 271 | 11299 | 12114 |
| 213019 | virG | hypothetical | YKCD1p19 | lipoprotein precursor | genbank | 31795272 | NP_857734.1 | 131 | 12238 | 12633 |
| 213020 | yscW | hypothetical | YKCD1p19.1 | needle complex outer membrane lipoprotein precursor YscC lipoprotein chaperone; stabilizes outer membrane secretin | genbank | 40458420 | NP_954875.1 | 111 | 12238 | 12573 |
| 213021 | yscU | hypothetical | YKCD1p20 | needle complex export protein type III secretion apparatus component; similar to Yop proteins translocation protein U | genbank | 31795273 | NP_857735.1 | 354 | 13209 | 14273 |
| 213022 | yscT | hypothetical | YKCD1p21 | needle complex export protein type III secretion apparatus component; similar to Yop proteins translocation protein T | genbank | 31795275 | NP_857736.1 | 261 | 14273 | 15058 |
| 213023 | yscS | hypothetical | YKCD1p22 | needle complex export protein type III secretion apparatus component; similar to Yop proteins translocation protein S | genbank | 31795276 | NP_857737.1 | 88 | 15055 | 15321 |
| 213024 | yscR | hypothetical | YKCD1p23 | needle complex export protein type III secretion apparatus component; similar to Yop proteins translocation protein R | genbank | 31795277 | NP_857738.1 | 217 | 15323 | 15976 |
| 213025 | yscQ | hypothetical | YKCD1p24 | needle complex export protein type III secretion apparatus component; similar to Yop proteins translocation protein Q | genbank | 31795278 | NP_857739.1 | 307 | 15973 | 16896 |
| 213026 | yscP | hypothetical | YKCD1p25 | type III secretion apparatus component similar to Yop proteins translocation protein P | genbank | 31795279 | NP_857740.1 | 455 | 16893 | 18260 |
| 213027 | yscO | hypothetical | YKCD1p26 | type III secretion apparatus component Yop proteins translocation protein O | genbank | 31795280 | NP_857741.1 | 154 | 18260 | 18724 |
| 213028 | yscN | hypothetical | YKCD1p27 | needle complex secretion ATPase Yops secretion protein; similar to Yops secretion ATPase YscN | genbank | 31795281 | NP_857742.1 | 439 | 18721 | 20040 |
| 213029 | lcrE | hypothetical | YKCD1p28 | secretion control protein similar to outer membrane protein YopN/LcrE | genbank | 31795282 | NP_857743.1 | 293 | 20238 | 21119 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 213030 | tyeA | hypothetical | YKCD1p29 | secretion and targeting control protein similar to Yersinia pseudotuberculosis hypothetical 10.7 kD protein | genbank | 31795283 | NP_857744.1 | 92 | 21100 | 21378 |
| 213031 | hypothetical | YKCD1p30 | hypothetical protein Orf42 similar to gi|581840; similar to Yersinia pseudotuberculosis hypothetical 13.5 kD protein | genbank | 31795284 | NP_857745.1 | 123 | 21365 | 21736 | |
| 213032 | hypothetical | YKCD1p31 | hypothetical protein Orf43 (o122); similar to gi|2459976 | genbank | 31795286 | NP_857746.1 | 122 | 21733 | 22101 | |
| 213033 | hypothetical | YKCD1p31.1 | hypothetical protein Orf44 (o114); similar to gi|1197038 | genbank | 31795287 | NP_857747.1 | 114 | 22098 | 22442 | |
| 213034 | lcrD | hypothetical | YKCD1p32 | low calcium response protein D secretion protein; invasion protein | genbank | 31795288 | NP_857748.1 | 704 | 22429 | 24543 |
| 213035 | lcrR | hypothetical | YKCD1p33 | low calcium response protein R | genbank | 31795289 | NP_857749.1 | 146 | 24540 | 24980 |
| 213036 | lcrG | hypothetical | YKCD1p34 | low calcium response protein G V-antigen; Yop secretion and targeting control protein | genbank | 31795290 | NP_857750.1 | 95 | 25022 | 25309 |
| 213037 | lcrV | hypothetical | YKCD1p35 | secreted effector protein V antigen; low calcium response protein V; functions in needle complex protein export; Yop secretion and targeting control protein; important for translocation pore formation; induces IL-10 production by macrophages; interacts with Toll-like receptor 2 | genbank | 31795291 | NP_857751.1 | 326 | 25311 | 26291 |
| 213038 | lcrH | hypothetical | YKCD1p36 | secretion chaperone chaperone for YopBD | genbank | 31795292 | NP_857752.1 | 168 | 26304 | 26810 |
| 213039 | yopB | hypothetical | YKCD1p37 | secreted effector protein Yop targeting protein; translocon component; important for translocation pore formation | genbank | 31795293 | NP_857753.1 | 401 | 26788 | 27993 |
| 213040 | yopD | hypothetical | YKCD1p38 | secreted effector protein Yop targeting negative regulator; translocon component; important for translocation pore formation | genbank | 31795294 | NP_857754.1 | 306 | 28012 | 28932 |
| 213041 | yopM | hypothetical | YKCD1p41 | secreted effector protein similar to outer membrane protein YopM | genbank | 31795297 | NP_857756.1 | 409 | 30873 | 32102 |
| 213042 | hypothetical | YKCD1p44 | hypothetical protein Orf60 (f139) | genbank | 40458421 | NP_954876.1 | 139 | 33338 | 33757 | |
| 213043 | hypothetical | YKCD1p46 | hypothetical protein ORF61 (o129) | genbank | 40458422 | NP_954877.1 | 129 | 34029 | 34418 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 213044 | sycT | hypothetical | YKCD1p47 | YopT chaperone | genbank | 40458423 | NP_954878.1 | 132 | 34462 | 34860 |
| 213045 | yopT | hypothetical | YKCD1p48 | secreted effector protein | genbank | 31795299 | NP_857758.1 | 322 | 34860 | 35828 |
| 213046 | yopK | hypothetical | YKCD1p49 | targeting protein | genbank | 31795300 | NP_857759.1 | 182 | 36328 | 36876 |
| 213047 | hypothetical | YKCD1p53 | hypothetical protein o65; similar to gi|790866 hypothetical protein from Neisseria gonorrhoeae\ | genbank | 40458424 | NP_954879.1 | 65 | 39125 | 39322 | |
| 213048 | sopA | hypothetical | YKCD1p54 | sopAB transcriptional repressor similar to Eschericia coli SopA | genbank | 31795301 | NP_857760.1 | 402 | 40080 | 41288 |
| 213049 | sopB | hypothetical | YKCD1p54.1 | plasmid-partitioning control protein similar to Eschericia coli SopB | genbank | 40458425 | NP_857761.2 | 320 | 41288 | 42250 |
| 213050 | hypothetical | YKCD1p56 | hypothetical protein Orf73 (o91); similar to gi|1806202 | genbank | 40458426 | NP_954880.1 | 80 | 43512 | 43754 | |
| 213051 | hypothetical | YKCD1p57 | hypothetical protein Orf74 (o99); similar to gi|1806203 | genbank | 40458427 | NP_954881.1 | 99 | 43747 | 44046 | |
| 213052 | hypothetical | YKCD1p58 | hypothetical protein Orf75 (f98); similar to gi|927749 hypothetical | genbank | 40458428 | NP_954882.1 | 98 | 43888 | 44184 | |
| 213053 | yopE | hypothetical | YKCD1p59 | secreted effector protein | genbank | 31795304 | NP_857762.1 | 219 | 44186 | 44845 |
| 213054 | sycE | hypothetical | YKCD1p60 | secretion chaperone chaperone for YopE | genbank | 31795305 | NP_857763.1 | 130 | 45039 | 45431 |
| 213055 | sycH | hypothetical | YKCD1p64 | secretion chaperone chaperone for YopH | genbank | 31795308 | NP_857766.1 | 141 | 48188 | 48613 |
| 213056 | hypothetical | YKCD1p65 | hypothetical protein | genbank | 40458429 | NP_954883.1 | 251 | 48761 | 49516 | |
| 213057 | hypothetical | YKCD1p65.1 | putative transposase | genbank | 31795309 | NP_857767.1 | 88 | 49594 | 49860 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 213058 | hypothetical | YKCD1p66 | hypothetical protein Orf84 (f109); similar to gi|2826244 type I restriction-modification enzyme | genbank | 40458430 | NP_954884.1 | 109 | 49960 | 50289 | |
| 213059 | hypothetical | YKCD1p67 | hypothetical protein Orf85 (f154); similar to gi|1360613 | genbank | 40458431 | NP_954885.1 | 154 | 50428 | 50892 | |
| 213060 | tnpR | hypothetical | YKCD1p68 | putative resolvase similar to transposon gamma-delta resolvase; transposon TN1000 | genbank | 31795310 | NP_857768.1 | 183 | 50911 | 51462 |
| 213061 | tnpA | hypothetical | YKCD1p69 | transposase transposase; Tn1000 | genbank | 31795311 | NP_857769.1 | 771 | 51626 | 53941 |
| 213062 | traI | hypothetical | YKCD1p74 | DNA helicase I similar to Eschericia coli DNA helicase I | genbank | 31795315 | NP_857772.1 | 138 | 56928 | 57344 |
| 213063 | repB | hypothetical | YKCD1p77 | replication protein similar to Salmonella enteritidis RepB | genbank | 31795317 | NP_857774.1 | 84 | 59067 | 59321 |
| 213064 | repA | hypothetical | YKCD1p79 | replication protein similar to Salmonella enteritidis RepA | genbank | 31795318 | NP_857775.1 | 292 | 59618 | 60496 |
| 213065 | hypothetical | YKCD1p80 | hypothetical protein Orf7 (o142); similar to gi|2149940 orf1 from Pseudomonas syringae | genbank | 40458432 | NP_954886.1 | 142 | 62654 | 63082 | |
| 213066 | ypkA | hypothetical | YKCD1p81 | protein kinase A similar to Yersinia pseudotuberculosis protein kinase A | genbank | 31795319 | NP_857776.1 | 732 | 63100 | 65298 |
| 213067 | yopP | hypothetical | YKCD1p82 | secreted effector protein | genbank | 31795320 | NP_857777.1 | 288 | 65694 | 66560 |
| 213068 | yopH | hypothetical | YKCD1p83 | secreted effector protein | genbank | 31795323 | NP_857779.1 | 468 | 68243 | 69649 |