Intracellular trafficking and secretion

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Autotransporter adhesin	U	Contig483	BxeC1276	COG5295	39	0.001
Autotransporter adhesin	U	Contig485	BxeA1514	COG5295	62	1e-10
Biopolymer transport protein	U	Contig483	BxeC0225	COG0848	120	3e-29
Biopolymer transport protein	U	Contig483	BxeC0226	COG0811	146	1e-36
Biopolymer transport protein	U	Contig483	BxeC0382	COG0811	142	5e-35
Biopolymer transport protein	U	Contig483	BxeC0383	COG0848	113	4e-27
Biopolymer transport protein	U	Contig483	BxeC0384	COG0848	93	7e-21
Biopolymer transport protein	U	Contig483	BxeC1052	COG0848	111	3e-26
Biopolymer transport protein	U	Contig483	BxeC1053	COG0811	138	4e-34
Biopolymer transport protein	U	Contig483	BxeC1376	COG0811	42	4e-05
Biopolymer transport protein	U	Contig484	BxeB0898	COG0848	78	3e-16
Biopolymer transport protein	U	Contig484	BxeB0899	COG0811	113	8e-27
Biopolymer transport protein	U	Contig484	BxeB2476	COG0811	154	6e-39
Biopolymer transport protein	U	Contig484	BxeB2477	COG0848	122	1e-29
Biopolymer transport protein	U	Contig485	BxeA0574	COG0811	135	2e-33
Biopolymer transport protein	U	Contig485	BxeA0575	COG0848	130	3e-32
Biopolymer transport protein	U	Contig485	BxeA2997	COG0848	101	3e-23
Biopolymer transport protein	U	Contig485	BxeA2998	COG0848	116	6e-28
Biopolymer transport protein	U	Contig485	BxeA2999	COG0811	142	3e-35
Biopolymer transport protein	U	Contig485	BxeA3141	COG0811	157	6e-40
Biopolymer transport protein	U	Contig485	BxeA3142	COG0848	124	2e-30
Biopolymer transport protein	U	Contig485	BxeA3917	COG0811	181	4e-47
Biopolymer transport protein	U	Contig485	BxeA3918	COG0848	112	2e-26
Competence protein ComGC	U	Contig485	BxeA4496	COG4537	41	7e-05
Competence protein ComGC	U	Contig485	BxeA4497	COG4537	48	2e-07
Flagellar biosynthesis/type III secretory pathway chaperone	U	Contig485	BxeA0137	COG3418	45	3e-06

FLAGELLUM STRUCTURE AND BIOGENESIS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Flagellar biosynthesis chaperone	U	Contig485	BxeA0162	COG2882	77	6e-16
Flagellar biosynthesis pathway component FlhA	U	Contig485	BxeA0131	COG1298	882	0.0
Flagellar biosynthesis pathway component FlhA	U	Contig485	BxeA3119	COG1298	471	1.0e-134
Flagellar biosynthesis pathway component FlhB	U	Contig485	BxeA0130	COG1377	418	1.0e-118
Flagellar biosynthesis pathway component FlhB	U	Contig485	BxeA0171	COG1377	68	1e-13
Flagellar biosynthesis pathway component FlhB	U	Contig485	BxeA3120	COG1377	152	2e-38
Flagellar biosynthesis pathway component FliP	U	Contig485	BxeA0155	COG1338	284	7e-78
Flagellar biosynthesis pathway component FliP	U	Contig485	BxeA3122	COG1338	158	3e-40
Flagellar biosynthesis pathway component FliQ	U	Contig485	BxeA0154	COG1987	81	1e-17
Flagellar biosynthesis pathway component FliR	U	Contig485	BxeA0153	COG1684	164	4e-42
Flagellar biosynthesis pathway component FliR	U	Contig485	BxeA3121	COG1684	69	3e-13
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig483	BxeC0043	COG1157	220	1e-58
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig483	BxeC0049	COG1157	231	8e-62
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig483	BxeC0143	COG1157	36	0.008
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig483	BxeC0238	COG1157	36	0.005
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig483	BxeC0800	COG1157	40	2e-04
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig484	BxeB2637	COG1157	34	0.008
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig485	BxeA0038	COG1157	204	1e-53
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig485	BxeA0040	COG1157	249	2e-67
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig485	BxeA0163	COG1157	584	1.0e-168
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig485	BxeA1879	COG1157	222	7e-59
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig485	BxeA1885	COG1157	224	1e-59
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig485	BxeA2288	COG1157	35	0.006
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig485	BxeA2363	COG1157	101	8e-23
Flagellar biosynthesis/type III secretory pathway ATPase	U	Contig485	BxeA3118	COG1157	462	1.0e-131
Flagellar biosynthesis/type III secretory pathway lipoprotein	U	Contig485	BxeA0166	COG1766	464	1.0e-131
Flagellar biosynthesis/type III secretory pathway lipoprotein	U	Contig485	BxeA3126	COG1766	92	6e-20
Flagellar biosynthesis/type III secretory pathway protein	U	Contig485	BxeA0164	COG1317	113	1e-26
Flagellar biosynthesis/type III secretory pathway protein	U	Contig485	BxeA3124	COG1317	65	6e-12
Flagellar hook-basal body protein	U	Contig484	BxeB0090	COG1677	50	5e-08
Flagellar hook-basal body protein	U	Contig484	BxeB0106	COG1677	47	3e-07
Flagellar hook-basal body protein	U	Contig485	BxeA0167	COG1677	68	2e-13
Flagellar motor switch/type III secretory pathway protein	U	Contig485	BxeA0157	COG1886	95	2e-21
Flagellar motor switch/type III secretory pathway protein	U	Contig485	BxeA3123	COG1886	55	9e-09
Flagellin-specific chaperone FliS	U	Contig485	BxeA0168	COG1516	115	2e-27
Muramidase (flagellum-specific)	U	Contig485	BxeA0148	COG1705	141	6e-35
Predicted ATPase involved in biogenesis of flagella	U	Contig484	BxeB0484	COG2874	50	4e-07
Predicted ATPase involved in biogenesis of flagella	U	Contig484	BxeB2609	COG2874	53	4e-08
Predicted ATPase involved in biogenesis of flagella	U	Contig485	BxeA1661	COG2874	46	7e-06

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Flp pilus assembly protein ATPase CpaE	U	Contig483	BxeC1086	COG4963	41	3e-04
Flp pilus assembly protein ATPase CpaE	U	Contig484	BxeB0507	COG4963	42	1e-04
Flp pilus assembly protein ATPase CpaE	U	Contig484	BxeB1187	COG4963	154	1e-38
Flp pilus assembly protein ATPase CpaE	U	Contig484	BxeB1726	COG4963	41	2e-04
Flp pilus assembly protein ATPase CpaE	U	Contig484	BxeB2039	COG4963	45	4e-06
Flp pilus assembly protein ATPase CpaE	U	Contig484	BxeB2255	COG4963	42	1e-04
Flp pilus assembly protein ATPase CpaE	U	Contig485	BxeA0030	COG4963	40	2e-04
Flp pilus assembly protein ATPase CpaE	U	Contig485	BxeA0133	COG4963	38	6e-04
Flp pilus assembly protein ATPase CpaE	U	Contig485	BxeA1230	COG4963	48	8e-07
Flp pilus assembly protein ATPase CpaE	U	Contig485	BxeA2533	COG4963	48	2e-06
Flp pilus assembly protein ATPase CpaE	U	Contig485	BxeA2797	COG4963	155	7e-39
Flp pilus assembly protein ATPase CpaE	U	Contig485	BxeA3424	COG4963	65	5e-12
Flp pilus assembly protein ATPase CpaE	U	Contig485	BxeA3481	COG4963	45	7e-06
Flp pilus assembly protein ATPase CpaE	U	Contig485	BxeA3850	COG4963	47	4e-06
Flp pilus assembly protein ATPase CpaE	U	Contig485	BxeA3864	COG4963	45	1e-05
Flp pilus assembly protein ATPase CpaF	U	Contig483	BxeC0456	COG4962	166	3e-42
Flp pilus assembly protein ATPase CpaF	U	Contig484	BxeB2921	COG4962	400	1.0e-112
Flp pilus assembly protein ATPase CpaF	U	Contig485	BxeA0504	COG4962	76	5e-15
Flp pilus assembly protein ATPase CpaF	U	Contig485	BxeA1762	COG4962	156	2e-39
Flp pilus assembly protein ATPase CpaF	U	Contig485	BxeA2649	COG4962	158	8e-40
Flp pilus assembly protein ATPase CpaF	U	Contig485	BxeA2796	COG4962	418	1.0e-118
Flp pilus assembly protein ATPase CpaF	U	Contig485	BxeA4500	COG4962	70	3e-13
Flp pilus assembly protein CpaB	U	Contig484	BxeB2919	COG3745	77	2e-15
Flp pilus assembly protein CpaB	U	Contig485	BxeA2799	COG3745	103	3e-23
Flp pilus assembly protein pilin Flp	U	Contig485	BxeA2802	COG3847	43	4e-06
Flp pilus assembly protein protease CpaA	U	Contig485	BxeA0502	COG4960	35	0.008
Flp pilus assembly protein protease CpaA	U	Contig485	BxeA2801	COG4960	52	2e-08
Flp pilus assembly protein secretin CpaC	U	Contig484	BxeB2920	COG4964	167	3e-42
Flp pilus assembly protein secretin CpaC	U	Contig485	BxeA0358	COG4964	96	7e-21
Flp pilus assembly protein secretin CpaC	U	Contig485	BxeA2798	COG4964	280	1e-76
Flp pilus assembly protein secretin CpaC	U	Contig485	BxeA3132	COG4964	82	1e-16
Flp pilus assembly protein secretin CpaC	U	Contig485	BxeA4501	COG4964	94	3e-20
Flp pilus assembly protein TadB	U	Contig484	BxeB2922	COG4965	143	1e-35
Flp pilus assembly protein TadB	U	Contig484	BxeB2923	COG4965	59	3e-10
Flp pilus assembly protein TadB	U	Contig485	BxeA2794	COG4965	51	1e-07
Flp pilus assembly protein TadB	U	Contig485	BxeA2795	COG4965	128	5e-31
Flp pilus assembly protein TadC	U	Contig484	BxeB2922	COG2064	39	5e-04
Flp pilus assembly protein TadC	U	Contig484	BxeB2923	COG2064	66	4e-12
Flp pilus assembly protein TadC	U	Contig485	BxeA2794	COG2064	73	3e-14
Flp pilus assembly protein TadD contains TPR repeats	U	Contig484	BxeB0492	COG5010	50	3e-07
Flp pilus assembly protein TadD contains TPR repeats	U	Contig484	BxeB0911	COG5010	64	3e-11
Flp pilus assembly protein TadD contains TPR repeats	U	Contig484	BxeB2043	COG5010	44	1e-04
Flp pilus assembly protein TadD contains TPR repeats	U	Contig484	BxeB2618	COG5010	42	1e-04
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA0100	COG5010	55	3e-08
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA0190	COG5010	57	3e-09
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA0959	COG5010	67	4e-12
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA1361	COG5010	48	2e-06
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA1625	COG5010	43	2e-05
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA1958	COG5010	37	0.002
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA2139	COG5010	38	0.002
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA2482	COG5010	58	1e-09
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA2793	COG5010	70	1e-13
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA2974	COG5010	37	0.009
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA3016	COG5010	55	2e-08
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA3326	COG5010	41	3e-04
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA3327	COG5010	42	2e-04
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA4040	COG5010	57	3e-09
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA4130	COG5010	45	1e-05
Flp pilus assembly protein TadD contains TPR repeats	U	Contig485	BxeA4384	COG5010	47	4e-06
Flp pilus assembly protein TadG	U	Contig484	BxeB2925	COG4961	47	2e-06
Flp pilus assembly protein TadG	U	Contig485	BxeA2800	COG4961	50	1e-07
Hemolysin activation/secretion protein	U	Contig483	BxeC1126	COG2831	198	8e-52
Hemolysin activation/secretion protein	U	Contig484	BxeB0153	COG2831	316	4e-87
Hemolysin activation/secretion protein	U	Contig485	BxeA1690	COG2831	85	2e-17
Hemolysin activation/secretion protein	U	Contig485	BxeA2806	COG2831	218	7e-58
Hemolysin activation/secretion protein	U	Contig485	BxeA2842	COG2831	404	1.0e-114
Hemolysin activation/secretion protein	U	Contig485	BxeA3644	COG2831	411	1.0e-116
Large exoprotein involved in heme utilization or adhesion	U	Contig483	BxeC1276	COG3210	38	0.004
Lipoprotein signal peptidase	U	Contig483	BxeC0390	COG0597	123	8e-30
Lipoprotein signal peptidase	U	Contig483	BxeC0884	COG0597	123	8e-30
Lipoprotein signal peptidase	U	Contig484	BxeB1606	COG0597	123	8e-30
Lipoprotein signal peptidase	U	Contig484	BxeB2910	COG0597	123	8e-30
Lipoprotein signal peptidase	U	Contig485	BxeA0806	COG0597	132	1e-32
Lipoprotein signal peptidase	U	Contig485	BxeA1105	COG0597	123	8e-30
Lipoprotein signal peptidase	U	Contig485	BxeA1119	COG0597	124	3e-30
Lipoprotein signal peptidase	U	Contig485	BxeA2904	COG0597	123	8e-30
Membrane protein implicated in regulation of membrane protease activity	U	Contig484	BxeB1082	COG1585	50	6e-07
Membrane protein implicated in regulation of membrane protease activity	U	Contig485	BxeA1700	COG1585	53	7e-09
Multiple antibiotic transporter	U	Contig484	BxeB1297	COG2095	103	1e-23
Multiple antibiotic transporter	U	Contig485	BxeA0401	COG2095	151	5e-38
Multiple antibiotic transporter	U	Contig485	BxeA0514	COG2095	138	4e-34
Negative regulator of flagellin synthesis (anti-sigma28 factor)	U	Contig485	BxeA0138	COG2747	43	5e-06
Outer membrane protein	U	Contig483	BxeC1142	COG1538	218	1e-57
Outer membrane protein	U	Contig483	BxeC1145	COG1538	149	5e-37
Outer membrane protein	U	Contig484	BxeB0471	COG1538	223	2e-59
Outer membrane protein	U	Contig484	BxeB0705	COG1538	116	4e-27
Outer membrane protein	U	Contig484	BxeB0733	COG1538	140	2e-34
Outer membrane protein	U	Contig484	BxeB0738	COG1538	168	8e-43
Outer membrane protein	U	Contig484	BxeB0851	COG1538	220	3e-58
Outer membrane protein	U	Contig484	BxeB1231	COG1538	258	9e-70
Outer membrane protein	U	Contig484	BxeB1325	COG1538	231	8e-62
Outer membrane protein	U	Contig484	BxeB1327	COG1538	38	0.001
Outer membrane protein	U	Contig484	BxeB1391	COG1538	215	5e-57
Outer membrane protein	U	Contig484	BxeB2011	COG1538	216	3e-57
Outer membrane protein	U	Contig484	BxeB2070	COG1538	224	1e-59
Outer membrane protein	U	Contig484	BxeB2121	COG1538	156	3e-39
Outer membrane protein	U	Contig484	BxeB2295	COG1538	104	1e-23
Outer membrane protein	U	Contig484	BxeB2338	COG1538	266	3e-72
Outer membrane protein	U	Contig484	BxeB2339	COG1538	36	0.005
Outer membrane protein	U	Contig484	BxeB2615	COG1538	187	2e-48
Outer membrane protein	U	Contig485	BxeA0710	COG1538	270	2e-73
Outer membrane protein	U	Contig485	BxeA1155	COG1538	221	1e-58
Outer membrane protein	U	Contig485	BxeA1346	COG1538	238	7e-64
Outer membrane protein	U	Contig485	BxeA1741	COG1538	219	4e-58
Outer membrane protein	U	Contig485	BxeA1966	COG1538	166	4e-42
Outer membrane protein	U	Contig485	BxeA2815	COG1538	209	4e-55
Outer membrane protein	U	Contig485	BxeA2820	COG1538	39	0.002
Outer membrane protein	U	Contig485	BxeA2893	COG1538	241	1e-64
Outer membrane protein	U	Contig485	BxeA3362	COG1538	206	3e-54
Outer membrane protein	U	Contig485	BxeA3582	COG1538	213	3e-56
Outer membrane protein	U	Contig485	BxeA4364	COG1538	216	4e-57
Outer membrane protein	U	Contig485	BxeA4489	COG1538	217	1e-57
Periplasmic component of the Tol biopolymer transport system	U	Contig485	BxeA3920	COG0823	309	2e-85
Periplasmic serine protease (ClpP class)	U	Contig484	BxeB1082	COG0616	42	1e-04
Periplasmic serine protease (ClpP class)	U	Contig484	BxeB1249	COG0616	34	0.008
Periplasmic serine protease (ClpP class)	U	Contig485	BxeA0776	COG0616	44	1e-05
Periplasmic serine protease (ClpP class)	U	Contig485	BxeA1066	COG0616	224	7e-60
Periplasmic serine protease (ClpP class)	U	Contig485	BxeA2295	COG0616	48	4e-07
Periplasmic serine protease (ClpP class)	U	Contig485	BxeA3063	COG0616	140	1e-34
Periplasmic serine protease (ClpP class)	U	Contig485	BxeA3571	COG0616	36	0.005
Periplasmic serine protease (ClpP class)	U	Contig485	BxeA3650	COG0616	131	6e-32
P pilus assembly protein chaperone PapD	U	Contig483	BxeC1152	COG3121	190	7e-50
P pilus assembly protein chaperone PapD	U	Contig484	BxeB0343	COG3121	93	2e-20
P pilus assembly protein chaperone PapD	U	Contig484	BxeB2971	COG3121	224	5e-60
P pilus assembly protein pilin FimA	U	Contig483	BxeC1149	COG3539	71	7e-14
P pilus assembly protein pilin FimA	U	Contig483	BxeC1150	COG3539	59	8e-10
P pilus assembly protein pilin FimA	U	Contig483	BxeC1153	COG3539	58	4e-10
P pilus assembly protein pilin FimA	U	Contig484	BxeB2969	COG3539	52	6e-08
P pilus assembly protein pilin FimA	U	Contig484	BxeB2972	COG3539	56	2e-09
P pilus assembly protein porin PapC	U	Contig483	BxeC1151	COG3188	678	0.0
P pilus assembly protein porin PapC	U	Contig484	BxeB0342	COG3188	275	7e-75
P pilus assembly protein porin PapC	U	Contig484	BxeB0728	COG3188	373	1.0e-104
P pilus assembly protein porin PapC	U	Contig484	BxeB2970	COG3188	735	0.0
Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake	U	Contig485	BxeA4417	COG0758	304	5e-84
Preprotein translocase subunit Sec63	U	Contig484	BxeB0191	COG5407	40	4e-04
Preprotein translocase subunit Sec63	U	Contig484	BxeB1015	COG5407	50	2e-07
Preprotein translocase subunit Sec63	U	Contig484	BxeB2345	COG5407	60	2e-10
Preprotein translocase subunit Sec63	U	Contig485	BxeA3960	COG5407	77	2e-15

PREPROTEIN TRANSLOCASE SUBUNITS

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Preprotein translocase subunit SecA (ATPase RNA helicase)	U	Contig485	BxeA0495	COG0653	1094	0.0
Preprotein translocase subunit SecB	U	Contig485	BxeA4178	COG1952	178	2e-46
Preprotein translocase subunit SecD	U	Contig483	BxeC1140	COG0342	48	3e-06
Preprotein translocase subunit SecD	U	Contig484	BxeB0850	COG0342	74	5e-14
Preprotein translocase subunit SecD	U	Contig484	BxeB1230	COG0342	63	9e-11
Preprotein translocase subunit SecD	U	Contig484	BxeB1393	COG0342	51	6e-07
Preprotein translocase subunit SecD	U	Contig484	BxeB2009	COG0342	66	1e-11
Preprotein translocase subunit SecD	U	Contig484	BxeB2010	COG0342	60	6e-10
Preprotein translocase subunit SecD	U	Contig484	BxeB2072	COG0342	44	5e-05
Preprotein translocase subunit SecD	U	Contig485	BxeA0709	COG0342	61	4e-10
Preprotein translocase subunit SecD	U	Contig485	BxeA0936	COG0342	48	2e-06
Preprotein translocase subunit SecD	U	Contig485	BxeA1743	COG0342	57	5e-09
Preprotein translocase subunit SecD	U	Contig485	BxeA1967	COG0342	40	7e-04
Preprotein translocase subunit SecD	U	Contig485	BxeA2892	COG0342	70	6e-13
Preprotein translocase subunit SecD	U	Contig485	BxeA2908	COG0342	59	1e-09
Preprotein translocase subunit SecD	U	Contig485	BxeA2909	COG0342	72	2e-13
Preprotein translocase subunit SecD	U	Contig485	BxeA2985	COG0342	52	2e-07
Preprotein translocase subunit SecD	U	Contig485	BxeA3360	COG0342	48	2e-06
Preprotein translocase subunit SecD	U	Contig485	BxeA3992	COG0342	458	1.0e-130
Preprotein translocase subunit SecD	U	Contig485	BxeA3993	COG0342	87	1e-18
Preprotein translocase subunit SecD	U	Contig485	BxeA4362	COG0342	50	1e-06
Preprotein translocase subunit SecE	U	Contig485	BxeA0300	COG0690	57	4e-10
Preprotein translocase subunit SecF	U	Contig484	BxeB0850	COG0341	46	1e-05
Preprotein translocase subunit SecF	U	Contig484	BxeB1230	COG0341	37	0.006
Preprotein translocase subunit SecF	U	Contig484	BxeB2009	COG0341	41	4e-04
Preprotein translocase subunit SecF	U	Contig484	BxeB2010	COG0341	39	0.002
Preprotein translocase subunit SecF	U	Contig485	BxeA0709	COG0341	39	0.001
Preprotein translocase subunit SecF	U	Contig485	BxeA0936	COG0341	41	4e-04
Preprotein translocase subunit SecF	U	Contig485	BxeA2892	COG0341	44	5e-05
Preprotein translocase subunit SecF	U	Contig485	BxeA2908	COG0341	44	4e-05
Preprotein translocase subunit SecF	U	Contig485	BxeA2909	COG0341	48	5e-06
Preprotein translocase subunit SecF	U	Contig485	BxeA2985	COG0341	39	0.002
Preprotein translocase subunit SecF	U	Contig485	BxeA3992	COG0341	89	1e-18
Preprotein translocase subunit SecF	U	Contig485	BxeA3993	COG0341	299	3e-82
Preprotein translocase subunit SecF	U	Contig485	BxeA4362	COG0341	37	0.006
Preprotein translocase subunit SecG	U	Contig485	BxeA3215	COG1314	64	5e-12
Preprotein translocase subunit SecY	U	Contig485	BxeA0334	COG0201	447	1.0e-127
Preprotein translocase subunit YajC	U	Contig485	BxeA3991	COG1862	109	4e-26
Preprotein translocase subunit YidC	U	Contig485	BxeA4466	COG0706	270	2e-73

COG Name	Group	Contig	Gene	COG ID	Score	Evalue
Protease subunit of ATP-dependent Clp protease	U	Contig485	BxeA0776	COG0740	292	1e-80
Protease subunit of ATP-dependent Clp protease	U	Contig485	BxeA2295	COG0740	307	3e-85
Protease subunit of ATP-dependent Clp protease	U	Contig485	BxeA3063	COG0740	37	0.002
Sec-independent protein secretion pathway components	U	Contig485	BxeA0409	COG1826	65	1e-12
Sec-independent protein secretion pathway components	U	Contig485	BxeA0410	COG1826	69	2e-13
Sec-independent protein secretion pathway component TatC	U	Contig485	BxeA0411	COG0805	229	1e-61
Signal peptidase I	U	Contig485	BxeA1084	COG0681	74	1e-14
Signal peptidase I	U	Contig485	BxeA2510	COG0681	58	6e-10
Signal recognition particle GTPase	U	Contig485	BxeA0132	COG0552	92	1e-19
Signal recognition particle GTPase	U	Contig485	BxeA0132	COG0541	88	2e-18
Signal recognition particle GTPase	U	Contig485	BxeA0516	COG0552	205	5e-54
Signal recognition particle GTPase	U	Contig485	BxeA0516	COG0541	585	1.0e-168
Signal recognition particle GTPase	U	Contig485	BxeA1513	COG0541	38	0.007
Signal recognition particle GTPase	U	Contig485	BxeA2481	COG0541	35	0.003
Signal recognition particle GTPase	U	Contig485	BxeA4140	COG0552	366	1.0e-102
Signal recognition particle GTPase	U	Contig485	BxeA4140	COG0541	225	5e-60
Tfp pilus assembly protein ATPase PilM	U	Contig484	BxeB1376	COG4972	44	2e-05
Tfp pilus assembly protein ATPase PilM	U	Contig485	BxeA0355	COG4972	79	4e-16
Tfp pilus assembly protein ATPase PilM	U	Contig485	BxeA0490	COG4972	55	8e-09
Tfp pilus assembly protein ATPase PilM	U	Contig485	BxeA4398	COG4972	46	5e-06
Tfp pilus assembly protein ATPase PilU	U	Contig483	BxeC0456	COG5008	62	8e-11
Tfp pilus assembly protein ATPase PilU	U	Contig484	BxeB2921	COG5008	59	1e-09
Tfp pilus assembly protein ATPase PilU	U	Contig485	BxeA0504	COG5008	120	2e-28
Tfp pilus assembly protein ATPase PilU	U	Contig485	BxeA1762	COG5008	58	1e-09
Tfp pilus assembly protein ATPase PilU	U	Contig485	BxeA2649	COG5008	55	8e-09
Tfp pilus assembly protein ATPase PilU	U	Contig485	BxeA2796	COG5008	60	3e-10
Tfp pilus assembly protein ATPase PilU	U	Contig485	BxeA4500	COG5008	126	3e-30
Tfp pilus assembly protein FimT	U	Contig485	BxeA0677	COG4970	45	3e-06
Tfp pilus assembly protein FimT	U	Contig485	BxeA3909	COG4970	43	7e-06
Tfp pilus assembly protein FimT	U	Contig485	BxeA3912	COG4970	73	2e-14
Tfp pilus assembly protein FimT	U	Contig485	BxeA4496	COG4970	39	3e-04
Tfp pilus assembly protein FimT	U	Contig485	BxeA4497	COG4970	44	5e-06
Tfp pilus assembly protein FimV	U	Contig484	BxeB0936	COG3170	36	0.008
Tfp pilus assembly protein FimV	U	Contig484	BxeB1694	COG3170	37	0.002
Tfp pilus assembly protein FimV	U	Contig484	BxeB2884	COG3170	44	7e-05
Tfp pilus assembly protein FimV	U	Contig485	BxeA2361	COG3170	38	0.004
Tfp pilus assembly protein FimV	U	Contig485	BxeA2393	COG3170	37	0.002
Tfp pilus assembly protein FimV	U	Contig485	BxeA2820	COG3170	43	1e-04
Tfp pilus assembly protein FimV	U	Contig485	BxeA4189	COG3170	37	0.004
Tfp pilus assembly protein FimV	U	Contig485	BxeA4401	COG3170	40	4e-04
Tfp pilus assembly protein major pilin PilA	U	Contig485	BxeA0677	COG4969	70	1e-13
Tfp pilus assembly protein major pilin PilA	U	Contig485	BxeA3909	COG4969	41	4e-05
Tfp pilus assembly protein major pilin PilA	U	Contig485	BxeA3912	COG4969	37	0.001
Tfp pilus assembly protein major pilin PilA	U	Contig485	BxeA4497	COG4969	50	1e-07
Tfp pilus assembly protein PilE	U	Contig485	BxeA0677	COG4968	55	5e-09
Tfp pilus assembly protein PilE	U	Contig485	BxeA3909	COG4968	75	3e-15
Tfp pilus assembly protein PilE	U	Contig485	BxeA3912	COG4968	40	8e-05
Tfp pilus assembly protein PilE	U	Contig485	BxeA4497	COG4968	59	1e-10
Tfp pilus assembly protein PilF	U	Contig484	BxeB0492	COG3063	40	3e-04
Tfp pilus assembly protein PilF	U	Contig484	BxeB0911	COG3063	69	1e-12
Tfp pilus assembly protein PilF	U	Contig484	BxeB2043	COG3063	53	1e-07
Tfp pilus assembly protein PilF	U	Contig484	BxeB2618	COG3063	57	3e-09
Tfp pilus assembly protein PilF	U	Contig485	BxeA0100	COG3063	52	1e-07
Tfp pilus assembly protein PilF	U	Contig485	BxeA0190	COG3063	70	5e-13
Tfp pilus assembly protein PilF	U	Contig485	BxeA0959	COG3063	69	9e-13
Tfp pilus assembly protein PilF	U	Contig485	BxeA1361	COG3063	40	4e-04
Tfp pilus assembly protein PilF	U	Contig485	BxeA1625	COG3063	34	0.009
Tfp pilus assembly protein PilF	U	Contig485	BxeA1958	COG3063	35	0.008
Tfp pilus assembly protein PilF	U	Contig485	BxeA2482	COG3063	61	2e-10
Tfp pilus assembly protein PilF	U	Contig485	BxeA2793	COG3063	35	0.006
Tfp pilus assembly protein PilF	U	Contig485	BxeA3016	COG3063	59	8e-10
Tfp pilus assembly protein PilF	U	Contig485	BxeA3326	COG3063	50	7e-07
Tfp pilus assembly protein PilF	U	Contig485	BxeA3327	COG3063	37	0.003
Tfp pilus assembly protein PilF	U	Contig485	BxeA4040	COG3063	58	1e-09
Tfp pilus assembly protein PilF	U	Contig485	BxeA4130	COG3063	38	0.002
Tfp pilus assembly protein PilN	U	Contig485	BxeA0356	COG3166	35	0.004
Tfp pilus assembly protein pilus retraction ATPase PilT	U	Contig483	BxeC0456	COG2805	47	2e-06
Tfp pilus assembly protein pilus retraction ATPase PilT	U	Contig484	BxeB0494	COG2805	36	0.004
Tfp pilus assembly protein pilus retraction ATPase PilT	U	Contig484	BxeB2921	COG2805	49	8e-07
Tfp pilus assembly protein pilus retraction ATPase PilT	U	Contig485	BxeA0504	COG2805	183	1e-47
Tfp pilus assembly protein pilus retraction ATPase PilT	U	Contig485	BxeA1762	COG2805	42	8e-05
Tfp pilus assembly protein pilus retraction ATPase PilT	U	Contig485	BxeA2649	COG2805	41	1e-04
Tfp pilus assembly protein pilus retraction ATPase PilT	U	Contig485	BxeA2796	COG2805	63	4e-11
Tfp pilus assembly protein pilus retraction ATPase PilT	U	Contig485	BxeA4500	COG2805	193	2e-50
Tfp pilus assembly protein PilV	U	Contig485	BxeA4495	COG4967	33	0.006
Tfp pilus assembly protein PilV	U	Contig485	BxeA4497	COG4967	33	0.007
Tfp pilus assembly protein PilW	U	Contig485	BxeA3911	COG4966	58	5e-10
Tfp pilus assembly protein PilW	U	Contig485	BxeA4497	COG4966	35	0.002
Type III secretory pathway component EscR	U	Contig485	BxeA0155	COG4790	161	7e-41
Type III secretory pathway component EscR	U	Contig485	BxeA3122	COG4790	178	4e-46
Type III secretory pathway component EscS	U	Contig485	BxeA0154	COG4794	60	3e-11
Type III secretory pathway component EscT	U	Contig485	BxeA0153	COG4791	85	5e-18
Type III secretory pathway component EscT	U	Contig485	BxeA3121	COG4791	78	7e-16
Type III secretory pathway component EscU	U	Contig485	BxeA0130	COG4792	221	6e-59
Type III secretory pathway component EscU	U	Contig485	BxeA0171	COG4792	44	3e-06
Type III secretory pathway component EscU	U	Contig485	BxeA3120	COG4792	127	6e-31
Type III secretory pathway component EscV	U	Contig485	BxeA0131	COG4789	530	1.0e-151
Type III secretory pathway component EscV	U	Contig485	BxeA3119	COG4789	494	1.0e-141
Type III secretory pathway lipoprotein EscJ	U	Contig485	BxeA0166	COG4669	60	4e-10
Type III secretory pathway lipoprotein EscJ	U	Contig485	BxeA3126	COG4669	174	7e-45
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	U	Contig483	BxeC0456	COG2804	55	9e-09
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	U	Contig484	BxeB2921	COG2804	75	2e-14
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	U	Contig485	BxeA0504	COG2804	467	1.0e-133
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	U	Contig485	BxeA1762	COG2804	50	3e-07
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	U	Contig485	BxeA2096	COG2804	37	0.008
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	U	Contig485	BxeA2374	COG2804	43	8e-05
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	U	Contig485	BxeA2649	COG2804	47	3e-06
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	U	Contig485	BxeA2796	COG2804	75	8e-15
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB	U	Contig485	BxeA4500	COG2804	557	1.0e-160
Type II secretory pathway component ExeA (predicted ATPase)	U	Contig483	BxeC0709	COG3267	72	4e-14
Type II secretory pathway component ExeA (predicted ATPase)	U	Contig485	BxeA1121	COG3267	72	4e-14
Type II secretory pathway component HofQ	U	Contig484	BxeB2920	COG4796	80	3e-16
Type II secretory pathway component HofQ	U	Contig485	BxeA0358	COG4796	253	2e-68
Type II secretory pathway component HofQ	U	Contig485	BxeA2798	COG4796	120	2e-28
Type II secretory pathway component HofQ	U	Contig485	BxeA3132	COG4796	108	1e-24
Type II secretory pathway component HofQ	U	Contig485	BxeA4501	COG4796	126	6e-30
Type II secretory pathway component PulC	U	Contig485	BxeA0412	COG3031	37	0.003
Type II secretory pathway component PulD	U	Contig484	BxeB2920	COG1450	121	1e-28
Type II secretory pathway component PulD	U	Contig485	BxeA0358	COG1450	159	6e-40
Type II secretory pathway component PulD	U	Contig485	BxeA2798	COG1450	127	2e-30
Type II secretory pathway component PulD	U	Contig485	BxeA3132	COG1450	222	6e-59
Type II secretory pathway component PulD	U	Contig485	BxeA4501	COG1450	254	1e-68
Type II secretory pathway component PulF	U	Contig484	BxeB2922	COG1459	35	0.006
Type II secretory pathway component PulF	U	Contig485	BxeA0503	COG1459	310	2e-85
Type II secretory pathway component PulF	U	Contig485	BxeA4499	COG1459	375	1.0e-105
Type II secretory pathway component PulJ	U	Contig485	BxeA3909	COG4795	37	6e-04
Type II secretory pathway component PulJ	U	Contig485	BxeA4494	COG4795	48	4e-07
Type II secretory pathway component PulJ	U	Contig485	BxeA4497	COG4795	35	0.003
Type II secretory pathway component PulK	U	Contig485	BxeA4493	COG3156	146	5e-36
Type II secretory pathway component PulL	U	Contig485	BxeA4492	COG3297	47	3e-06
Type II secretory pathway component PulM	U	Contig485	BxeA4491	COG3149	100	9e-23
Type II secretory pathway prepilin signal peptidase PulO and related peptidase	U	Contig485	BxeA0502	COG1989	144	6e-36
Type II secretory pathway pseudopilin PulG	U	Contig485	BxeA0677	COG2165	46	2e-06
Type II secretory pathway pseudopilin PulG	U	Contig485	BxeA3909	COG2165	43	1e-05
Type II secretory pathway pseudopilin PulG	U	Contig485	BxeA3912	COG2165	40	1e-04
Type II secretory pathway pseudopilin PulG	U	Contig485	BxeA4495	COG2165	47	6e-07
Type II secretory pathway pseudopilin PulG	U	Contig485	BxeA4496	COG2165	49	2e-07
Type II secretory pathway pseudopilin PulG	U	Contig485	BxeA4497	COG2165	99	1e-22
Type IV secretory pathway component VirB8 protein	U	Contig483	BxeC0453	COG3736	107	7e-25
Type IV secretory pathway component VirB8 protein	U	Contig485	BxeA1759	COG3736	117	6e-28
Type IV secretory pathway component VirB8 protein	U	Contig485	BxeA2652	COG3736	118	4e-28
Type IV secretory pathway protease TraF	U	Contig485	BxeA1084	COG4959	53	4e-08
Type IV secretory pathway protease TraF	U	Contig485	BxeA2510	COG4959	39	4e-04
Type IV secretory pathway TrbL protein	U	Contig485	BxeA0786	COG3846	36	0.003
Type IV secretory pathway TrbL protein	U	Contig485	BxeA2321	COG3846	40	6e-04
Type IV secretory pathway TrbL protein	U	Contig485	BxeA2823	COG3846	38	0.002
Type IV secretory pathway TrbL protein	U	Contig485	BxeA2840	COG3846	41	3e-04
Type IV secretory pathway TrbL protein	U	Contig485	BxeA3303	COG3846	40	0.001
Type IV secretory pathway TrbL protein	U	Contig485	BxeA3875	COG3846	36	0.007
Type IV secretory pathway TrbL protein	U	Contig485	BxeA4401	COG3846	41	4e-04
Type IV secretory pathway VirB10 protein	U	Contig483	BxeC0227	COG2948	35	0.008
Type IV secretory pathway VirB10 protein	U	Contig483	BxeC0381	COG2948	37	0.002
Type IV secretory pathway VirB10 protein	U	Contig483	BxeC0455	COG2948	162	4e-41
Type IV secretory pathway VirB10 protein	U	Contig484	BxeB0724	COG2948	36	0.005
Type IV secretory pathway VirB10 protein	U	Contig485	BxeA1761	COG2948	164	1e-41
Type IV secretory pathway VirB10 protein	U	Contig485	BxeA2650	COG2948	168	5e-43
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	U	Contig483	BxeC0456	COG0630	195	4e-51
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	U	Contig483	BxeC0685	COG0630	36	0.003
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	U	Contig483	BxeC1111	COG0630	36	0.004
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	U	Contig484	BxeB2921	COG0630	220	2e-58
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	U	Contig485	BxeA0504	COG0630	78	8e-16
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	U	Contig485	BxeA1762	COG0630	197	1e-51
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	U	Contig485	BxeA2649	COG0630	194	8e-51
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	U	Contig485	BxeA2796	COG0630	236	3e-63
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	U	Contig485	BxeA4208	COG0630	34	0.010
Type IV secretory pathway VirB11 protein involved in flagella biosynthesis	U	Contig485	BxeA4500	COG0630	83	5e-17
Type IV secretory pathway VirB3 protein	U	Contig483	BxeC0449	COG3702	59	5e-11
Type IV secretory pathway VirB3 protein	U	Contig485	BxeA1755	COG3702	62	8e-12
Type IV secretory pathway VirB3 protein	U	Contig485	BxeA2656	COG3702	58	2e-10
Type IV secretory pathway VirB4 protein	U	Contig483	BxeC0450	COG3451	609	1.0e-175
Type IV secretory pathway VirB4 protein	U	Contig484	BxeB1822	COG3451	36	0.003
Type IV secretory pathway VirB4 protein	U	Contig485	BxeA1184	COG3451	77	5e-15
Type IV secretory pathway VirB4 protein	U	Contig485	BxeA1195	COG3451	38	0.003
Type IV secretory pathway VirB4 protein	U	Contig485	BxeA1502	COG3451	34	0.008
Type IV secretory pathway VirB4 protein	U	Contig485	BxeA1756	COG3451	628	0.0
Type IV secretory pathway VirB4 protein	U	Contig485	BxeA2655	COG3451	624	1.0e-180
Type IV secretory pathway VirB6 protein	U	Contig483	BxeC0451	COG3704	58	1e-09
Type IV secretory pathway VirB6 protein	U	Contig485	BxeA1757	COG3704	67	3e-12
Type IV secretory pathway VirB6 protein	U	Contig485	BxeA2654	COG3704	70	3e-13
Type IV secretory pathway VirB9 protein	U	Contig483	BxeC0454	COG3504	137	9e-34
Type IV secretory pathway VirB9 protein	U	Contig485	BxeA1760	COG3504	140	1e-34
Type IV secretory pathway VirB9 protein	U	Contig485	BxeA2651	COG3504	138	5e-34
Type IV secretory pathway VirD4 protein	U	Contig483	BxeC0458	COG3505	324	1e-89
Type IV secretory pathway VirD4 protein	U	Contig485	BxeA1195	COG3505	43	6e-05
Type IV secretory pathway VirD4 protein	U	Contig485	BxeA1764	COG3505	326	2e-90
Type IV secretory pathway VirD4 protein	U	Contig485	BxeA2647	COG3505	327	1e-90
Type IV secretory pathway VirJ protein	U	Contig485	BxeA2034	COG3946	315	3e-87
Type V secretory pathway adhesin AidA	U	Contig483	BxeC1276	COG3468	63	1e-10
Vesicle coat complex COPII subunit SEC24/subunit SFB2/subunit SFB3	U	Contig484	BxeB2043	COG5028	40	0.002
Vesicle coat complex COPII subunit SEC24/subunit SFB2/subunit SFB3	U	Contig485	BxeA1032	COG5028	42	2e-04
Vesicle coat complex COPII subunit SEC24/subunit SFB2/subunit SFB3	U	Contig485	BxeA1560	COG5028	35	0.006

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