R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
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Use the 
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>gi|7441093|pir||T14810 ribosomal protein L32, cytosolic - Arabidopsis thaliana
>gi|5816996|emb|CAB53651.1| (AL110123) ribosomal protein L32-like
protein [Arabidopsis thaliana] >gi|7268562|emb|CAB78812.1|
(AL161547) ribosomal protein L32-like protein [Arabidopsis
thaliana]
Length = 133
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 133
0 50 100
Plus Strand HSPs:
Score = 344 (121.1 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 63/72 (87%), Positives = 68/72 (94%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
IDSRVRRKFKG TLMPN+GYGSDKKTRHYLP+GFKKFVVHN +LELLMMHNRTYCAEIA
Sbjct: 39 IDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIA 98
Query: 183 HNISTRKRKDIV 218
HN+ST+KRK IV
Sbjct: 99 HNVSTKKRKAIV 110
>gi|1350720|sp|P49211|RL32_ARATH 60S RIBOSOMAL PROTEIN L32
Length = 111
Frame 3 hits (HSPs): _________________________________
Annotated Domains: ______________________________________________
__________________________________________________
Database sequence: | | | | 111
0 50 100
__________________
Annotated Domains:
PFAM Ribosomal_L32e: Ribosomal protein L32 12..111
__________________
Plus Strand HSPs:
Score = 341 (120.0 bits), Expect = 4.4e-30, P = 4.4e-30
Identities = 62/72 (86%), Positives = 68/72 (94%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
IDSRVRRKFKG TLMPN+GYGSDKKTRHYLP+GFKKFVVHN +LELLMMHNRTYCAEIA
Sbjct: 37 IDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIA 96
Query: 183 HNISTRKRKDIV 218
HN+ST++RK IV
Sbjct: 97 HNVSTKRRKAIV 108
>gi|3123274|sp|P04359|RL32_DROME 60S RIBOSOMAL PROTEIN L32 (RP49)
>gi|1928968|gb|AAB51389.1| (U92431) ribosomal protein 49
[Drosophila melanogaster] >gi|2739301|emb|CAA74278.1| (Y13939)
ribosomal protein 49 [Drosophila melanogaster]
>gi|7301893|gb|AAF57001.1| (AE003772) RpL32 gene product
[Drosophila melanogaster]
Length = 134
Frame 3 hits (HSPs): ____________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | 134
0 50 100
__________________
Annotated Domains:
BLOCKS BL00580A: Ribosomal protein L32e protein 13..48
BLOCKS BL00580B: Ribosomal protein L32e protein 49..85
DOMO DM01896: RIBOSOMALPROTEINL32E 2..132
PFAM Ribosomal_L32e: Ribosomal protein L32 15..124
PRODOM PD003823: RL32(14) 14..123
PROSITE RIBOSOMAL_L32E: Ribosomal protein L32e s 19..39
__________________
Plus Strand HSPs:
Score = 281 (98.9 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 50/72 (69%), Positives = 63/72 (87%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
ID+RVRR+FKG LMPNIGYGS+K+TRH LP GFKKF+VHN ++LE+L+M NR YC EIA
Sbjct: 40 IDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIA 99
Query: 183 HNISTRKRKDIV 218
H +S++KRK+IV
Sbjct: 100 HGVSSKKRKEIV 111
>gi|4506635 ref|NP_000985.1| ribosomal protein L32 >gi|6981482
ref|NP_037358.1|| ribosomal protein L32
>gi|132886|sp|P02433|RL32_HUMAN 60S RIBOSOMAL PROTEIN L32
>gi|71335|pir||R5HU32 ribosomal protein L32 - human
>gi|71336|pir||R5MS32 ribosomal protein L32 - mouse
>gi|71337|pir||R5RT32 ribosomal protein L32 - rat
>gi|36132|emb|CAA27048.1| (X03342) rpL32 (aa 1-135) [Homo sapiens]
>gi|57117|emb|CAA29777.1| (X06483) ribosomal protein L32 [Rattus
norvegicus] >gi|200781|gb|AAC28897.1| (K02060) ribosomal protein
L32-3A [Mus musculus] >gi|226004|prf||1405339A ribosomal protein
L32 [Rattus norvegicus]
Length = 135
Frame 3 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | 135
0 50 100
Plus Strand HSPs:
Score = 279 (98.2 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 50/72 (69%), Positives = 64/72 (88%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
ID+RVRR+FKG LMPNIGYGS+KKT+H LP GF+KF+VHN K+LE+L+M N++YCAEIA
Sbjct: 41 IDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIA 100
Query: 183 HNISTRKRKDIV 218
HN+S++ RK IV
Sbjct: 101 HNVSSKNRKAIV 112
>gi|1173049|sp|P46615|RL32_DROPS 60S RIBOSOMAL PROTEIN L32 (RP49)
>gi|299925|gb|AAB26418.1| (S59382) ribosomal protein 49 [Drosophila
pseudoobscura, Peptide, 134 aa] >gi|2950188|emb|CAA70875.1|
(Y09704) ribosomal protein 49 [Drosophila affinis]
>gi|2950190|emb|CAA70876.1| (Y09705) ribosomal protein 49
[Drosophila azteca] >gi|2950198|emb|CAA70880.1| (Y09709) ribosomal
protein 49 [Drosophila miranda] >gi|2950200|emb|CAA70881.1|
(Y09710) ribosomal protein 49 [Drosophila persimilis]
Length = 134
Frame 3 hits (HSPs): ____________________________
Annotated Domains: __________________________________________
__________________________________________________
Database sequence: | | | | 134
0 50 100
__________________
Annotated Domains:
BLOCKS BL00580A: Ribosomal protein L32e protein 13..48
BLOCKS BL00580B: Ribosomal protein L32e protein 49..85
PFAM Ribosomal_L32e: Ribosomal protein L32 15..124
PRODOM PD003823: RL32(14) 14..123
PROSITE RIBOSOMAL_L32E: Ribosomal protein L32e s 19..39
__________________
Plus Strand HSPs:
Score = 279 (98.2 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 50/72 (69%), Positives = 63/72 (87%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
ID+RVRR+FKG LMPNIGYGS+K+TRH LP GFKKF+VHN ++LE+L+M NR YC EIA
Sbjct: 40 IDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIA 99
Query: 183 HNISTRKRKDIV 218
H +S++KRK+IV
Sbjct: 100 HAVSSKKRKEIV 111
>gi|6118520|gb|AAF04131.1|AF190579_1 (AF190579) ribosomal protein L32 [Ovis
aries]
Length = 118
Frame 3 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | 118
0 50 100
Plus Strand HSPs:
Score = 279 (98.2 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 50/72 (69%), Positives = 64/72 (88%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
ID+RVRR+FKG LMPNIGYGS+KKT+H LP GF+KF+VHN K+LE+L+M N++YCAEIA
Sbjct: 37 IDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIA 96
Query: 183 HNISTRKRKDIV 218
HN+S++ RK IV
Sbjct: 97 HNVSSKNRKAIV 108
>gi|132977|sp|P13930|RL32_DROSU 60S RIBOSOMAL PROTEIN L32 (RP49)
>gi|71338|pir||R5FF32 ribosomal protein L32 - fruit fly (Drosophila
subobscura) >gi|158308|gb|AAA28857.1| (M21333) ribosomal protein
[Drosophila subobscura] >gi|402560|emb|CAA51212.1| (X72647)
ribosomal protein 49 [Drosophila subobscura]
>gi|402562|emb|CAA51211.1| (X72646) ribosomal protein 49
[Drosophila subobscura] >gi|402564|emb|CAA51214.1| (X72649)
ribosomal protein 49 [Drosophila subobscura]
>gi|402566|emb|CAA51215.1| (X72650) ribosomal protein 49
[Drosophila subobscura] >gi|402568|emb|CAA51216.1| (X72651)
ribosomal protein 49 [Drosophila subobscura]
>gi|402570|emb|CAA51217.1| (X72652) ribosomal protein 49
[Drosophila subobscura] >gi|402572|emb|CAA51218.1| (X72653)
ribosomal protein 49 [Drosophila subobscura]
>gi|402574|emb|CAA51219.1| (X72654) ribosomal protein 49
[Drosophila subobscura] >gi|402634|emb|CAA51213.1| (X72648)
ribosomal protein 49 [Drosophila subobscura]
>gi|602800|emb|CAA56383.1| (X80078) ribosomal protein 49
[Drosophila subobscura] >gi|602802|emb|CAA56381.1| (X80076)
ribosomal protein 49 [Drosophila subobscura]
>gi|602804|emb|CAA56401.1| (X80096) ribosomal protein 49
[Drosophila subobscura] >gi|602806|emb|CAA56402.1| (X80097)
ribosomal protein 49 [Drosophila subobscura]
>gi|602808|emb|CAA56385.1| (X80080) ribosomal protein 49
[Drosophila subobscura] >gi|602810|emb|CAA56404.1| (X80099)
ribosomal protein 49 [Drosophila subobscura]
>gi|602812|emb|CAA56403.1| (X80098) ribosomal protein 49
[Drosophila subobscura] >gi|602814|emb|CAA56386.1| (X80081)
ribosomal protein 49 [Drosophila subobscura]
>gi|602816|emb|CAA56387.1| (X80082) ribosomal protein 49
[Drosophila subobscura] >gi|602818|emb|CAA56405.1| (X80100)
ribosomal protein 49 [Drosophila subobscura]
>gi|602820|emb|CAA56388.1| (X80083) ribosomal protein 49
[Drosophila subobscura] >gi|602822|emb|CAA56406.1| (X80101)
ribosomal protein 49 [Drosophila subobscura]
>gi|602824|emb|CAA56407.1| (X80102) ribosomal protein 49
[Drosophila subobscura] >gi|602826|emb|CAA56408.1| (X80103)
ribosomal protein 49 [Drosophila subobscura]
>gi|602828|emb|CAA56389.1| (X80084) ribosomal protein 49
[Drosophila subobscura] >gi|602830|emb|CAA56390.1| (X80085)
ribosomal protein 49 [Drosophila subobscura]
>gi|602832|emb|CAA56409.1| (X80104) ribosomal protein 49
[Drosophila subobscura] >gi|602834|emb|CAA56410.1| (X80105)
ribosomal protein 49 [Drosophila subobscura]
>gi|602836|emb|CAA56391.1| (X80086) ribosomal protein 49
[Drosophila subobscura] >gi|602838|emb|CAA56393.1| (X80088)
ribosomal protein 49 [Drosophila subobscura]
>gi|602840|emb|CAA56392.1| (X80087) ribosomal protein 49
[Drosophila subobscura] >gi|602842|emb|CAA56382.1| (X80077)
ribosomal protein 49 [Drosophila subobscura]
>gi|602844|emb|CAA56411.1| (X80106) ribosomal protein 49
[Drosophila subobscura] >gi|602846|emb|CAA56394.1| (X80089)
ribosomal protein 49 [Drosophila subobscura]
>gi|602848|emb|CAA56413.1| (X80108) ribosomal protein 49
[Drosophila subobscura] >gi|602850|emb|CAA56414.1| (X80109)
ribosomal protein 49 [Drosophila subobscura]
>gi|602852|emb|CAA56412.1| (X80107) ribosomal protein 49
[Drosophila subobscura] >gi|602854|emb|CAA56384.1| (X80079)
ribosomal protein 49 [Drosophila subobscura]
>gi|602856|emb|CAA56395.1| (X80090) ribosomal protein 49
[Drosophila subobscura] >gi|602858|emb|CAA56396.1| (X80091)
ribosomal protein 49 [Drosophila subobscura]
>gi|602860|emb|CAA56397.1| (X80092) ribosomal protein 49
[Drosophila subobscura] >gi|602862|emb|CAA56398.1| (X80093)
ribosomal protein 49 [Drosophila subobscura]
>gi|602864|emb|CAA56399.1| (X80094) ribosomal protein 49
[Drosophila subobscura] >gi|602866|emb|CAA56400.1| (X80095)
ribosomal protein 49 [Drosophila subobscura]
>gi|2950192|emb|CAA70877.1| (Y09706) ribosomal protein 49
[Drosophila bifasciata] >gi|2950194|emb|CAA70878.1| (Y09707)
ribosomal protein 49 [Drosophila guanche]
>gi|2950196|emb|CAA70879.1| (Y09708) ribosomal protein 49
[Drosophila madeirensis] >gi|4741246|emb|CAB41776.1| (AJ228881)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741248|emb|CAB41777.1| (AJ228882) ribosomal protein 49
[Drosophila subobscura] >gi|4741250|emb|CAB41778.1| (AJ228883)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741252|emb|CAB41779.1| (AJ228884) ribosomal protein 49
[Drosophila subobscura] >gi|4741254|emb|CAB41780.1| (AJ228885)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741256|emb|CAB41781.1| (AJ228886) ribosomal protein 49
[Drosophila subobscura] >gi|4741258|emb|CAB41782.1| (AJ228887)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741260|emb|CAB41783.1| (AJ228888) ribosomal protein 49
[Drosophila subobscura] >gi|4741262|emb|CAB41784.1| (AJ228889)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741264|emb|CAB41785.1| (AJ228890) ribosomal protein 49
[Drosophila subobscura] >gi|4741266|emb|CAB41786.1| (AJ228891)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741268|emb|CAB41787.1| (AJ228892) ribosomal protein 49
[Drosophila subobscura] >gi|4741270|emb|CAB41788.1| (AJ228893)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741272|emb|CAB41789.1| (AJ228894) ribosomal protein 49
[Drosophila subobscura] >gi|4741274|emb|CAB41790.1| (AJ228895)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741276|emb|CAB41791.1| (AJ228896) ribosomal protein 49
[Drosophila subobscura] >gi|4741278|emb|CAB41792.1| (AJ228897)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741280|emb|CAB41793.1| (AJ228898) ribosomal protein 49
[Drosophila subobscura] >gi|4741282|emb|CAB41794.1| (AJ228899)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741284|emb|CAB41795.1| (AJ228900) ribosomal protein 49
[Drosophila subobscura] >gi|4741286|emb|CAB41796.1| (AJ228901)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741288|emb|CAB41797.1| (AJ228902) ribosomal protein 49
[Drosophila subobscura] >gi|4741290|emb|CAB41798.1| (AJ228903)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741292|emb|CAB41799.1| (AJ228904) ribosomal protein 49
[Drosophila subobscura] >gi|4741294|emb|CAB41800.1| (AJ228905)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741296|emb|CAB41801.1| (AJ228906) ribosomal protein 49
[Drosophila subobscura] >gi|4741298|emb|CAB41802.1| (AJ228907)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741300|emb|CAB41803.1| (AJ228908) ribosomal protein 49
[Drosophila subobscura] >gi|4741302|emb|CAB41804.1| (AJ228909)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741304|emb|CAB41805.1| (AJ228910) ribosomal protein 49
[Drosophila subobscura] >gi|4741306|emb|CAB41806.1| (AJ228911)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741308|emb|CAB41807.1| (AJ228912) ribosomal protein 49
[Drosophila subobscura] >gi|4741310|emb|CAB41808.1| (AJ228913)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741312|emb|CAB41809.1| (AJ228914) ribosomal protein 49
[Drosophila subobscura] >gi|4741314|emb|CAB41810.1| (AJ228915)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741316|emb|CAB41811.1| (AJ228916) ribosomal protein 49
[Drosophila subobscura] >gi|4741318|emb|CAB41812.1| (AJ228917)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741320|emb|CAB41813.1| (AJ228918) ribosomal protein 49
[Drosophila subobscura] >gi|4741360|emb|CAB41814.1| (AJ228919)
ribosomal protein 49 [Drosophila subobscura]
>gi|4741362|emb|CAB41815.1| (AJ228920) ribosomal protein 49
[Drosophila subobscura] >gi|4741364|emb|CAB41816.1| (AJ228921)
ribosomal protein 49 [Drosophila subobscura]
Length = 134
Frame 3 hits (HSPs): ____________________________
Annotated Domains: __________________________________________
__________________________________________________
Database sequence: | | | | 134
0 50 100
__________________
Annotated Domains:
BLOCKS BL00580A: Ribosomal protein L32e protein 13..48
BLOCKS BL00580B: Ribosomal protein L32e protein 49..85
PFAM Ribosomal_L32e: Ribosomal protein L32 15..124
PRODOM PD003823: RL32(14) 14..123
PROSITE RIBOSOMAL_L32E: Ribosomal protein L32e s 19..39
__________________
Plus Strand HSPs:
Score = 278 (97.9 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 50/72 (69%), Positives = 63/72 (87%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
ID+RVRR+FKG LMPNIGYGS+K+TRH LP GFKKF+VHN ++LE+L+M NR YC EIA
Sbjct: 40 IDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIA 99
Query: 183 HNISTRKRKDIV 218
H +S++KRK+IV
Sbjct: 100 HAVSSKKRKEIV 111
>gi|2500374|sp|Q94460|RL32_DROAC 60S RIBOSOMAL PROTEIN L32 (RP49)
>gi|1519359|gb|AAB07488.1| (U66458) ribosomal protein 49
[Drosophila acanthoptera]
Length = 134
Frame 3 hits (HSPs): ____________________________
Annotated Domains: __________________________________________
__________________________________________________
Database sequence: | | | | 134
0 50 100
__________________
Annotated Domains:
BLOCKS BL00580A: Ribosomal protein L32e protein 13..48
BLOCKS BL00580B: Ribosomal protein L32e protein 49..85
PFAM Ribosomal_L32e: Ribosomal protein L32 15..124
PRODOM PD003823: RL32(14) 14..123
PROSITE RIBOSOMAL_L32E: Ribosomal protein L32e s 19..39
__________________
Plus Strand HSPs:
Score = 278 (97.9 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 50/72 (69%), Positives = 62/72 (86%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
ID+RVRR+FKG LMPNIGYGS+K+TRH LP GFKKF+VHN ++LE+L+M NR YC EIA
Sbjct: 40 IDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNREYCGEIA 99
Query: 183 HNISTRKRKDIV 218
H +S+ KRK+IV
Sbjct: 100 HGVSSNKRKEIV 111
>gi|5834553|emb|CAB55349.1| (AJ245566) ribosomal protein 49 [Drosophila
virilis]
Length = 102
Frame 3 hits (HSPs): ____________________________________
__________________________________________________
Database sequence: | | | | | | | 102
0 20 40 60 80 100
Plus Strand HSPs:
Score = 276 (97.2 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 49/72 (68%), Positives = 62/72 (86%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
ID+RVRR+FKG LMPNIGYGS+K+TRH LP GF KF+VHN ++LE+L+M NR YC EIA
Sbjct: 8 IDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFNKFLVHNVRELEVLLMQNRVYCGEIA 67
Query: 183 HNISTRKRKDIV 218
H +S++KRK+IV
Sbjct: 68 HGVSSKKRKEIV 79
>gi|2979601|gb|AAC06183.1| (AC004453) 60S RIBOSOMAL PROTEIN; match to P02433
(PID:g132886) [Homo sapiens]
Length = 135
Frame 3 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | 135
0 50 100
Plus Strand HSPs:
Score = 275 (96.8 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 51/76 (67%), Positives = 66/76 (86%), Frame = +3
Query: 6 DSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIAH 185
D+RVRR+FKG LMPNIGYGS+KKT+H LP GF+KF+VHN K+LE+L+M N++YCAEIAH
Sbjct: 42 DNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNIKELEVLLMCNKSYCAEIAH 101
Query: 186 NISTRKRKDIV*ESCA 233
N+S++ RK IV E+ A
Sbjct: 102 NVSSKNRKAIV-ETAA 116
>gi|132949|sp|P17932|RL3P_MOUSE 60S RIBOSOMAL PROTEIN L32'
>gi|2119147|pir||I58276 ribosomal protein L32' - mouse
>gi|200774|gb|AAA40065.1| (M35397) ribosomal protein L32' [Mus
musculus] >gi|200779|gb|AAA40068.1| (M23453) ribosomal protein L32'
[Mus musculus]
Length = 135
Frame 3 hits (HSPs): ____________________________
Annotated Domains: __________________________________________
__________________________________________________
Database sequence: | | | | 135
0 50 100
__________________
Annotated Domains:
BLOCKS BL00580A: Ribosomal protein L32e protein 13..48
BLOCKS BL00580B: Ribosomal protein L32e protein 49..85
PFAM Ribosomal_L32e: Ribosomal protein L32 15..124
PRODOM PD003823: RL32(14) 14..123
PROSITE RIBOSOMAL_L32E: Ribosomal protein L32e s 20..40
__________________
Plus Strand HSPs:
Score = 242 (85.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 46/72 (63%), Positives = 60/72 (83%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
ID+RVRR+FKG LMPNIGY S+KKT+H L GF+KF+VHN K+ E+L+M N++Y AEIA
Sbjct: 41 IDNRVRRRFKGQILMPNIGYRSNKKTKHTLSSGFRKFLVHNIKEPEVLLMCNKSYRAEIA 100
Query: 183 HNISTRKRKDIV 218
HN+S++ RK IV
Sbjct: 101 HNVSSKNRKAIV 112
>gi|6093886|sp|O42935|R32B_SCHPO 60S RIBOSOMAL PROTEIN L32-B
>gi|7490035|pir||T39562 60S ribosomal protein L32 - fission yeast
(Schizosaccharomyces pombe) >gi|2853103|emb|CAA16918.1| (AL021767)
60S ribosomal protein L32 [Schizosaccharomyces pombe]
Length = 127
Frame 3 hits (HSPs): _____________________________
Annotated Domains: ____________________________________________
__________________________________________________
Database sequence: | | | | 127
0 50 100
__________________
Annotated Domains:
PFAM Ribosomal_L32e: Ribosomal protein L32 10..119
PRODOM PD003823: RL32(14) 9..117
__________________
Plus Strand HSPs:
Score = 236 (83.1 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 44/72 (61%), Positives = 57/72 (79%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
IDS VRR+F+G MP IGYG++KKTR+ +P+G K F+V N D+ELL+MHN+TY AEIA
Sbjct: 35 IDSCVRRRFRGTISMPKIGYGNNKKTRYCMPNGLKAFLVRNVSDVELLLMHNKTYAAEIA 94
Query: 183 HNISTRKRKDIV 218
N+S RKR +IV
Sbjct: 95 SNVSARKRVEIV 106
>gi|1841306|dbj|BAA19212.1| (AB000914) ribosomal protein L32 homolog
[Schizosaccharomyces pombe]
Length = 124
Frame 3 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | 124
0 50 100
Plus Strand HSPs:
Score = 235 (82.7 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 44/72 (61%), Positives = 57/72 (79%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
IDS VRR+F+G MP IGYG++KKTR+ +P+G K F+V N D+ELL+MHN+TY AEIA
Sbjct: 32 IDSCVRRRFRGTISMPKIGYGNNKKTRYCMPNGLKAFLVRNVSDVELLLMHNKTYAAEIA 91
Query: 183 HNISTRKRKDIV 218
N+S RKR +IV
Sbjct: 92 GNVSARKRVEIV 103
>gi|2275294|gb|AAB63872.1| (U97380) 60S ribosomal protein L32 homolog
[Schizosaccharomyces pombe] >gi|2275334|gb|AAB63892.1| (U97400) 60S
ribosomal protein [Schizosaccharomyces pombe]
Length = 107
Frame 3 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | | | 107
0 20 40 60 80 100
Plus Strand HSPs:
Score = 235 (82.7 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 44/72 (61%), Positives = 57/72 (79%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
IDS VRR+F+G MP IGYG++KKTR+ +P+G K F+V N D+ELL+MHN+TY AEIA
Sbjct: 29 IDSCVRRRFRGTISMPKIGYGNNKKTRYCMPNGLKAFLVRNVSDVELLLMHNKTYAAEIA 88
Query: 183 HNISTRKRKDIV 218
N+S RKR +IV
Sbjct: 89 GNVSARKRVEIV 100
>gi|6093885|sp|P79015|R32A_SCHPO 60S RIBOSOMAL PROTEIN L32-A
>gi|7490034|pir||T38756 60s ribosomal protein L32 - fission yeast
(Schizosaccharomyces pombe)
Length = 127
Frame 3 hits (HSPs): _____________________________
Annotated Domains: ____________________________________________
__________________________________________________
Database sequence: | | | | 127
0 50 100
__________________
Annotated Domains:
PFAM Ribosomal_L32e: Ribosomal protein L32 10..119
PRODOM PD003823: RL32(14) 9..117
PROSITE RIBOSOMAL_L32E: Ribosomal protein L32e s 14..34
__________________
Plus Strand HSPs:
Score = 235 (82.7 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 44/72 (61%), Positives = 57/72 (79%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
IDS VRR+F+G MP IGYG++KKTR+ +P+G K F+V N D+ELL+MHN+TY AEIA
Sbjct: 35 IDSCVRRRFRGTISMPKIGYGNNKKTRYCMPNGLKAFLVRNVSDVELLLMHNKTYAAEIA 94
Query: 183 HNISTRKRKDIV 218
N+S RKR +IV
Sbjct: 95 GNVSARKRVEIV 106
>gi|7508357|pir||T25221 hypothetical protein T24B8.1 - Caenorhabditis elegans
>gi|3880149|emb|CAA92757.1| (Z68338) predicted using
Genefinder~similar to 60S ribosomal protein L32~cDNA EST
EMBL:D72110 comes from this gene; cDNA EST EMBL:D74144 comes from
this gene~cDNA EST EMBL:C08131 comes from this gene; cDNA EST
EMBL:C09759 comes from this gene~cDNA EST >
Length = 134
Frame 3 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | 134
0 50 100
Plus Strand HSPs:
Score = 211 (74.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 38/72 (52%), Positives = 53/72 (73%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
ID+RVRR+F+G MP IG+GSD++TR LP+G+KK +V N KDL++L+M + Y EI
Sbjct: 40 IDNRVRRRFRGMRAMPTIGHGSDRRTRFVLPNGYKKVLVQNVKDLDMLLMQSYKYIGEIG 99
Query: 183 HNISTRKRKDIV 218
H +S + RK IV
Sbjct: 100 HGVSAKSRKGIV 111
>gi|3850141|emb|CAA21942.1| (AL033391) Ribosomal protein L32e [Candida
albicans]
Length = 131
Frame 3 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | 131
0 50 100
Plus Strand HSPs:
Score = 209 (73.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 39/72 (54%), Positives = 56/72 (77%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
IDS VRR+F+G PNIGYGS+KKT+ P G+K ++V N KDL++L++H ++Y AEIA
Sbjct: 39 IDSCVRRRFRGTIPQPNIGYGSNKKTKFLNPAGYKVYLVKNVKDLDVLLLHTKSYAAEIA 98
Query: 183 HNISTRKRKDIV 218
++S+RKR +IV
Sbjct: 99 SSVSSRKRVEIV 110
>gi|6319378 ref|NP_009460.1| Ribosomal protein L32; Rpl32p
>gi|585885|sp|P38061|RL32_YEAST 60S RIBOSOMAL PROTEIN L32
>gi|626885|pir||S45410 ribosomal protein L32.e, cytosolic - yeast
(Saccharomyces cerevisiae) >gi|496683|emb|CAA56010.1| (X79489)
B-130 protein [Saccharomyces cerevisiae] >gi|536152|emb|CAA84914.1|
(Z35853) ORF YBL092w [Saccharomyces cerevisiae]
Length = 130
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 130
0 50 100
Plus Strand HSPs:
Score = 207 (72.9 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 41/68 (60%), Positives = 48/68 (70%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
IDS VRR+F+G P IGYGS+KKT+ P G K F+V N KDLE L MH +TY AEIA
Sbjct: 38 IDSVVRRRFRGNISQPKIGYGSNKKTKFLSPSGHKTFLVANVKDLETLTMHTKTYAAEIA 97
Query: 183 HNISTRKR 206
HNIS + R
Sbjct: 98 HNISAKNR 105
>gi|8478|emb|CAA25404.1| (X00848) ribosomal protein 49 [Drosophila
melanogaster]
Length = 133
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 133
0 50 100
Plus Strand HSPs:
Score = 202 (71.1 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 40/72 (55%), Positives = 53/72 (73%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
ID+RV R+FKG LMPNIGYGS+K+TRH LP GFKKF+VHN ++LE+L+M N E+
Sbjct: 40 IDNRVGRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNPRLLREMP 99
Query: 183 HNISTRKRKDIV 218
S + K+I+
Sbjct: 100 -TASPPRSKEII 110
>gi|71339|pir||R5FF49 ribosomal protein L32 - fruit fly (Drosophila
melanogaster)
Length = 133
Frame 3 hits (HSPs): ___________________________
Annotated Domains: _________
__________________________________________________
Database sequence: | | | | 133
0 50 100
__________________
Annotated Domains:
PROSITE RIBOSOMAL_L32E: Ribosomal protein L32e s 19..39
__________________
Plus Strand HSPs:
Score = 202 (71.1 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 40/72 (55%), Positives = 53/72 (73%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
ID+RV R+FKG LMPNIGYGS+K+TRH LP GFKKF+VHN ++LE+L+M N E+
Sbjct: 40 IDNRVGRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNPRLLREMP 99
Query: 183 HNISTRKRKDIV 218
S + K+I+
Sbjct: 100 -TASPPRSKEII 110
>gi|7530119|emb|CAB86700.1| (AL163505) ribosomal protein 49 (L32) [Leishmania
major]
Length = 133
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 133
0 50 100
Plus Strand HSPs:
Score = 196 (69.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 36/71 (50%), Positives = 49/71 (69%), Frame = +3
Query: 6 DSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIAH 185
DS VRR++KG MPN GYGSD+ T++ P GF+ F ++N +DL +L+M NR Y I+H
Sbjct: 40 DSPVRRRYKGQKAMPNKGYGSDRATKYITPSGFRNFPINNVEDLYMLVMQNRKYAGVISH 99
Query: 186 NISTRKRKDIV 218
+ RKRK IV
Sbjct: 100 TVGARKRKAIV 110
>gi|7576919|gb|AAF64051.1|AF241825_1 (AF241825) 60S ribosomal protein L32
[Leishmania donovani]
Length = 134
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 134
0 50 100
Plus Strand HSPs:
Score = 185 (65.1 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 35/71 (49%), Positives = 49/71 (69%), Frame = +3
Query: 6 DSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFV-VHNEKDLELLMMHNRTYCAEIA 182
DS VRR++KG +MPN GYGSD+ T++ P GF+ F ++N +DL +L+M NR Y I+
Sbjct: 40 DSPVRRRYKGQKVMPNKGYGSDRATKYITPSGFRNFPPINNVEDLYMLVMQNRKYAGVIS 99
Query: 183 HNISTRKRKDI 215
H + RKRK I
Sbjct: 100 HTVGARKRKAI 110
>gi|6690147|gb|AAF24012.1|AF083031_9 (AF083031) ribosomal protein L32
[Guillardia theta]
Length = 119
Frame 3 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | 119
0 50 100
Plus Strand HSPs:
Score = 160 (56.3 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 35/72 (48%), Positives = 46/72 (63%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
IDS VRR+FKG T MPNIGYGS KK+R+ G F V + K+L+ L+M N Y EI+
Sbjct: 32 IDSCVRRRFKGKTKMPNIGYGSSKKSRYLGKTGRYIFKVKSPKELDFLIMSNLFYDIEIS 91
Query: 183 HNISTRKRKDIV 218
+ K+K I+
Sbjct: 92 KKLGKEKKKKII 103
>gi|479612|pir||S34860 ribosomal protein L32.e, cytosolic - fungus (Trichoderma
harzianum) >gi|313822|emb|CAA50729.1| (X71914) ribosomal protein
L32 [Trichoderma harzianum]
Length = 137
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 137
0 50 100
Plus Strand HSPs:
Score = 143 (50.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 34/71 (47%), Positives = 41/71 (57%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELL----MMHNRTYC 170
ID RVRR+F+G MP IGYGS+KKTR P G F+ HN + L M
Sbjct: 39 IDGRVRRRFRGTIRMPKIGYGSNKKTRFLTPSGHNAFL-HNARTLSCAAGCSMQSTDPSA 97
Query: 171 AEIAHNISTRKR 206
AEIA +S+RKR
Sbjct: 98 AEIATPVSSRKR 109
>gi|464633|sp|P34040|RL32_TRIHA 60S RIBOSOMAL PROTEIN L32
Length = 137
Frame 3 hits (HSPs): ___________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 137
0 50 100
__________________
Annotated Domains:
BLOCKS BL00580A: Ribosomal protein L32e protein 12..47
BLOCKS BL00580B: Ribosomal protein L32e protein 48..84
DOMO DM01896: RIBOSOMALPROTEINL32E 1..136
PFAM Ribosomal_L32e: Ribosomal protein L32 14..127
PRODOM PD003823: RL32(14) 15..110
PRODOM PD071244: RL32_TRIHA 112..136
PROSITE RIBOSOMAL_L32E: Ribosomal protein L32e s 18..38
__________________
Plus Strand HSPs:
Score = 143 (50.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 34/71 (47%), Positives = 41/71 (57%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELL----MMHNRTYC 170
ID RVRR+F+G MP IGYGS+KKTR P G F+ HN + L M
Sbjct: 39 IDGRVRRRFRGTIRMPKIGYGSNKKTRFLTPSGHNAFL-HNARTLSCAAGCSMQSTDPSA 97
Query: 171 AEIAHNISTRKR 206
AEIA +S+RKR
Sbjct: 98 AEIATPVSSRKR 109
>gi|4768988|gb|AAD29707.1|AF140494_1 (AF140494) 60S ribosomal protein [Oryza
sativa]
Length = 114
Frame 3 hits (HSPs): ___________
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 114
0 50 100
Plus Strand HSPs:
Score = 93 (32.7 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 19/25 (76%), Positives = 21/25 (84%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPN--IGYGSD 71
IDSRVRRKFKGCTLMPN I +G +
Sbjct: 49 IDSRVRRKFKGCTLMPNYWIWFGQE 73
Score = 54 (19.0 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 14/32 (43%), Positives = 18/32 (56%), Frame = +2
Query: 71 QEDPPLSP*WF*EICCSQ*EGLGTAHDAQQDL 166
QED L E+C +Q G A+DAQQD+
Sbjct: 83 QEDQALPAQQVQEVCGAQRLRAGAAYDAQQDV 114
>gi|6094054|sp|O59435|RL32_PYRHO 50S RIBOSOMAL PROTEIN L32E
>gi|7441089|pir||D71185 probable ribosomal protein L32 - Pyrococcus
horikoshii >gi|3258192|dbj|BAA30875.1| (AP000007) 130aa long
hypothetical 50S ribosomal protein L32 [Pyrococcus horikoshii]
Length = 130
Frame 3 hits (HSPs): ___________________________
Annotated Domains: ___________________________________________
__________________________________________________
Database sequence: | | | | 130
0 50 100
__________________
Annotated Domains:
PFAM Ribosomal_L32e: Ribosomal protein L32 19..128
PRODOM PD003823: RL32(14) 19..127
__________________
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 28/72 (38%), Positives = 43/72 (59%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
IDS++R K KG P+IG+ S + R P G+++ ++HN K+LE L R A IA
Sbjct: 46 IDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELERL--DPRRQAARIA 103
Query: 183 HNISTRKRKDIV 218
H + +KR +I+
Sbjct: 104 HTVGKKKRIEIL 115
>gi|7441092|pir||G75145 lsu ribosomal protein l32e (rpl32e) PAB2133 -
Pyrococcus abyssi (strain Orsay) >gi|5457756|emb|CAB49246.1|
(AJ248284) LSU ribosomal protein L32E (rpl32E) [Pyrococcus abyssi]
Length = 130
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 130
0 50 100
Plus Strand HSPs:
Score = 126 (44.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 27/72 (37%), Positives = 43/72 (59%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
IDS++R K KG P+IG+ S + R P G+++ ++HN K+LE L + A IA
Sbjct: 46 IDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELEKL--DPKRQAARIA 103
Query: 183 HNISTRKRKDIV 218
H + +KR +I+
Sbjct: 104 HTVGKKKRIEIL 115
>gi|3914750|sp|O05638|RL32_SULAC 50S RIBOSOMAL PROTEIN L32E
>gi|2052263|emb|CAA69094.1| (Y07778) ribosomal protein L32E
[Sulfolobus acidocaldarius]
Length = 125
Frame 3 hits (HSPs): _____________________________
Annotated Domains: _____________________________________________
__________________________________________________
Database sequence: | | | | 125
0 50 100
__________________
Annotated Domains:
PFAM Ribosomal_L32e: Ribosomal protein L32 14..125
PRODOM PD003823: RL32(14) 14..123
__________________
Plus Strand HSPs:
Score = 97 (34.1 bits), Expect = 0.00032, P = 0.00032
Identities = 23/72 (31%), Positives = 36/72 (50%), Frame = +3
Query: 3 IDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIA 182
ID+ +R + KG IGY +DK+ R P G + +V + KDLE + I+
Sbjct: 41 IDNAIRLELKGYQPKVKIGYRTDKQIRGLHPSGLRPILVKSVKDLEAFAKGKQDVIIIIS 100
Query: 183 HNISTRKRKDIV 218
I RKR +++
Sbjct: 101 STIGLRKRIELI 112
>gi|1710539|sp|P51421|RL32_MAIZE 60S RIBOSOMAL PROTEIN L32
>gi|481444|pir||S38633 ribosomal protein L32, cytosolic - maize
(fragment) >gi|415410|emb|CAA53301.1| (X75646) ribosomal protein
L32 [Zea mays]
Length = 42
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | 42
0 20 40
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.00041, P = 0.00041
Identities = 23/41 (56%), Positives = 28/41 (68%), Frame = +3
Query: 162 TYCAEIAHNISTRKRKDIV*ESCAT*CLL*QTKQPDYASQE 284
TYCAEIAHN+ST+KRK+IV E A ++ TK SQE
Sbjct: 1 TYCAEIAHNVSTKKRKEIV-ERAAQLDIVVPTKLARAPSQE 40
>gi|6015775|emb|CAB57602.1| (Y18930) ribosomal protein L32E [Sulfolobus
solfataricus]
Length = 138
Frame 3 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | 138
0 50 100
Plus Strand HSPs:
Score = 97 (34.1 bits), Expect = 0.00080, P = 0.00080
Identities = 19/71 (26%), Positives = 37/71 (52%), Frame = +3
Query: 6 DSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIAH 185
D++ R K +G + ++GY KK R + P G ++ +VHN +L + I+
Sbjct: 51 DNKTRLKVRGFPAIVSVGYRLPKKVRGFHPSGLRQVIVHNVNELVKVQNQKDNVIVTISS 110
Query: 186 NISTRKRKDIV 218
++ +KR +I+
Sbjct: 111 SVGFKKRLEIL 121
>gi|3122726|sp|O26128|RL32_METTH 50S RIBOSOMAL PROTEIN L32E
>gi|7441090|pir||D69124 ribosomal protein L32 - Methanobacterium
thermoautotrophicum (strain Delta H) >gi|2621049|gb|AAB84522.1|
(AE000795) ribosomal protein L32 [Methanobacterium
thermoautotrophicum]
Length = 108
Frame 3 hits (HSPs): ______________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 108
0 20 40 60 80 100
__________________
Annotated Domains:
BLOCKS BL00580A: Ribosomal protein L32e protein 1..36
BLOCKS BL00580B: Ribosomal protein L32e protein 35..71
PFAM Ribosomal_L32e: Ribosomal protein L32 1..108
PRODOM PD003823: RL32(14) 2..107
PROSITE RIBOSOMAL_L32E: Ribosomal protein L32e s 5..25
__________________
Plus Strand HSPs:
Score = 90 (31.7 bits), Expect = 0.0018, P = 0.0018
Identities = 23/66 (34%), Positives = 34/66 (51%), Frame = +3
Query: 9 SRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIAHN 188
S++RR KG MP IGY + R P G++ +V N ++LE L + A IA
Sbjct: 28 SKMRRYEKGKPAMPAIGYRKPSEVRGLHPSGYEDVLVSNMRELEALDPEKQA--ARIASA 85
Query: 189 ISTRKR 206
+ RK+
Sbjct: 86 VGARKK 91
>gi|1710540|sp|P54010|RL32_METJA 50S RIBOSOMAL PROTEIN L32E
>gi|2119148|pir||H64358 ribosomal protein L32 - Methanococcus
jannaschii >gi|1591174|gb|AAB98461.1| (U67497) LSU ribosomal
protein L32E [Methanococcus jannaschii]
Length = 146
Frame 3 hits (HSPs): ________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 146
0 50 100
__________________
Annotated Domains:
BLOCKS BL00580A: Ribosomal protein L32e protein 12..47
BLOCKS BL00580B: Ribosomal protein L32e protein 48..84
DOMO DM01896: RIBOSOMALPROTEINL32E 1..145
PFAM Ribosomal_L32e: Ribosomal protein L32 14..121
PRODOM PD003823: RL32(14) 14..119
PRODOM PD071243: RL32_METJA 121..145
PROSITE RIBOSOMAL_L32E: Ribosomal protein L32e s 18..38
__________________
Plus Strand HSPs:
Score = 97 (34.1 bits), Expect = 0.0019, P = 0.0019
Identities = 26/70 (37%), Positives = 38/70 (54%), Frame = +3
Query: 9 SRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIAHN 188
S++R K+K + IGY S K R P G + +V+N KDLE L + T A IA
Sbjct: 41 SKMRLKWKEKPPVVEIGYRSPKAVRGLHPSGLEDVLVYNVKDLEKL--NPETQGARIAST 98
Query: 189 ISTRKRKDIV 218
+ RK+ +I+
Sbjct: 99 VGKRKKIEII 108
>gi|6685878|sp|Q9YF92|RL32_AERPE 50S RIBOSOMAL PROTEIN L32E
>gi|7521369|pir||D72726 probable ribosomal protein L32 APE0349 -
Aeropyrum pernix (strain K1) >gi|5103988|dbj|BAA79304.1| (AP000059)
145aa long hypothetical 50S ribosomal protein L32 [Aeropyrum
pernix]
Length = 145
Frame 3 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | 145
0 50 100
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.083, P = 0.079
Identities = 21/70 (30%), Positives = 36/70 (51%), Frame = +3
Query: 6 DSRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIAH 185
D+++R + KG + +GY + K R P G + +V + KDLE L + IA
Sbjct: 65 DNKMRLQLKGYPPIVKVGYRTPKAIRGMHPSGLEPVIVSSAKDLERLSPER--HIVYIAS 122
Query: 186 NISTRKRKDI 215
+ RK+++I
Sbjct: 123 GVGLRKKQEI 132
>gi|3914752|sp|O28371|RL32_ARCFU 50S RIBOSOMAL PROTEIN L32E
>gi|7441091|pir||C69488 LSU ribosomal protein L32E (rpl32E) homolog
- Archaeoglobus fulgidus >gi|2648647|gb|AAB89358.1| (AE000971) LSU
ribosomal protein L32E (rpl32E) [Archaeoglobus fulgidus]
Length = 129
Frame 3 hits (HSPs): ___________________________
Annotated Domains: ____________________________________________
__________________________________________________
Database sequence: | | | | 129
0 50 100
__________________
Annotated Domains:
PFAM Ribosomal_L32e: Ribosomal protein L32 16..127
PRODOM PD003823: RL32(14) 16..126
__________________
Plus Strand HSPs:
Score = 80 (28.2 bits), Expect = 0.45, P = 0.36
Identities = 20/67 (29%), Positives = 38/67 (56%), Frame = +3
Query: 9 SRVRRKFKG--CTLMP-NIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEI 179
+++R+++ G +P N+G+GS K R P G+++ +V+N DLE + + I
Sbjct: 44 NKLRKRYGGKWSGRIPVNVGFGSPKAVRGLHPSGYEEVLVYNPADLEKIDKERQA--VRI 101
Query: 180 AHNISTRKR 206
A + +KR
Sbjct: 102 ASCVGMKKR 110
>gi|297388|emb|CAA79651.1| (Z19595) her-1 protein [Caenorhabditis elegans]
Length = 64
Frame 3 hits (HSPs): ____________________________________________
__________________________________________________
Database sequence: | | | | | 64
0 20 40 60
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 3.0, P = 0.95
Identities = 17/56 (30%), Positives = 26/56 (46%), Frame = +3
Query: 3 IDSRVRR-KFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTY 167
ID+ R K C+L+ N+ Y +K R DG K V+ E+ + RT+
Sbjct: 6 IDAATRLDSIKSCSLLDNVLYKCFEKCRSLRKDGIKIEVLQFEEYCNATFIQKRTF 61
>gi|132885|sp|P12736|RL32_HALMA 50S RIBOSOMAL PROTEIN L32E (HL5)
>gi|71341|pir||R7HSH5 ribosomal protein HL5 - Haloarcula
marismortui >gi|48865|emb|CAA41288.1| (X58395) ribosomal protein
[Haloarcula marismortui] >gi|228188|prf||1718307E ribosomal protein
HL5 [Haloarcula marismortui]
Length = 241
Frame 3 hits (HSPs): _______________
Annotated Domains: _______________________________________________
__________________________________________________
Database sequence: | | | | | | 241
0 50 100 150 200
__________________
Annotated Domains:
BLOCKS BL00580A: Ribosomal protein L32e protein 122..157
BLOCKS BL00580B: Ribosomal protein L32e protein 158..194
DOMO DM01896: RIBOSOMALPROTEINL32E 111..239
PFAM Ribosomal_L32e: Ribosomal protein L32 124..231
PRODOM PD001880: RA51(10) DMC1(7) RADA(5) 18..62
PRODOM PD078760: RL32_HALMA 64..123
PRODOM PD003823: RL32(14) 125..230
PROSITE RIBOSOMAL_L32E: Ribosomal protein L32e s 129..149
__________________
Plus Strand HSPs:
Score = 78 (27.5 bits), Expect = 5.3, P = 1.0
Identities = 24/69 (34%), Positives = 31/69 (44%), Frame = +3
Query: 9 SRVRRKFKGCTLMPNIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIAHN 188
S+ RR KG G+ S R P GF++ VHN DLE + T IA
Sbjct: 152 SKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLE--GVDGDTEAVRIASK 209
Query: 189 ISTRKRKDI 215
+ RKR+ I
Sbjct: 210 VGARKRERI 218
>gi|132888|sp|P14549|RL32_METVA PROBABLE 50S RIBOSOMAL PROTEIN L32E (ORF D)
>gi|71340|pir||R5MXD ribosomal protein D - Methanococcus vannielii
>gi|44765|emb|CAA34697.1| (X16720) ORF d [Methanococcus vannielii]
Length = 135
Frame 3 hits (HSPs): ______________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | 135
0 50 100
__________________
Annotated Domains:
BLOCKS BL00580A: Ribosomal protein L32e protein 15..50
BLOCKS BL00580B: Ribosomal protein L32e protein 51..87
DOMO DM01896: RIBOSOMALPROTEINL32E 4..134
PFAM Ribosomal_L32e: Ribosomal protein L32 17..124
PRODOM PD003823: RL32(14) 17..122
PROSITE RIBOSOMAL_L32E: Ribosomal protein L32e s 21..41
__________________
Plus Strand HSPs:
Score = 73 (25.7 bits), Expect = 5.6, P = 1.0
Identities = 22/59 (37%), Positives = 30/59 (50%), Frame = +3
Query: 42 LMP-NIGYGSDKKTRHYLPDGFKKFVVHNEKDLELLMMHNRTYCAEIAHNISTRKRKDIV 218
L P IG+ R P G + +V+N K L L + +T A IA + TRKR +IV
Sbjct: 54 LSPVKIGFRGPALVRGLHPSGLEDIIVNNVKQLAAL--NPKTQGARIASAVGTRKRIEIV 111
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.97
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.340 0.150 0.510
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.369 0.169 0.663
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.365 0.165 0.569
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.337 0.144 0.450
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.350 0.153 0.512
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.343 0.148 0.502
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 146 146 10. 73 3 12 22 0.12 33
30 0.11 36
+2 0 146 145 10. 73 3 12 22 0.12 33
30 0.11 36
+1 0 146 145 10. 73 3 12 22 0.12 33
30 0.11 36
-1 0 146 146 10. 73 3 12 22 0.12 33
30 0.11 36
-2 0 146 145 10. 73 3 12 22 0.12 33
30 0.11 36
-3 0 146 145 10. 73 3 12 22 0.12 33
30 0.11 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 8:50 PM CDT May 27, 2000
Format: BLAST
# of letters in database: 158,518,215
# of sequences in database: 505,245
# of database sequences satisfying E: 38
No. of states in DFA: 593 (58 KB)
Total size of DFA: 175 KB (192 KB)
Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 4
Search cpu time: 187.83u 1.10s 188.93t Elapsed: 00:01:00
Total cpu time: 187.89u 1.17s 189.06t Elapsed: 00:01:01
Start: Wed Feb 14 22:34:27 2001 End: Wed Feb 14 22:35:28 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000