R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|5668813|gb|AAD46039.1|AC007519_24 (AC007519) Similar to gb|X77136 HSR203J
protein from Nicotiana tabacum and is a member of the PF|00135
Carboxylesterase family. ESTs gb|Z25688 and gb|F14025 come from
this gene. [Arabidopsis thaliana]
Length = 314
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | | | 314
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 238 (83.8 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 39/118 (33%), Positives = 68/118 (57%), Frame = +1
Query: 4 LKILGGLLCCPFFWGSKPIGSXAVEGHEXSLAMKVWNFACPDAPGGIDNPWINPCVPGAP 183
LKI G + P+FWG++PIG+ + + W F CP G D+PWINP G+P
Sbjct: 178 LKIKGIGMIHPYFWGTQPIGAEIKDEARKQMVDGWWEFVCPSEKGS-DDPWINPFADGSP 236
Query: 184 SLATLACSKLLVTITGKDXFRDRDILYHHTVXQSGWQGELQLFDAGDXXHAFXLFKPE 357
L L C ++++T+ KD +R +Y+ + +S W+G++++ + + H F +F+P+
Sbjct: 237 DLGGLGCERVMITVAEKDILNERGKMYYERLVKSEWKGKVEIMETKEKDHVFHIFEPD 294
>gi|11279652|pir||T46213 hypothetical protein T8P19.200 - Arabidopsis thaliana
>gi|6523100|emb|CAB62358.1| (AL133315) putative protein
[Arabidopsis thaliana]
Length = 324
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | | | 324
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 181 (63.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 44/139 (31%), Positives = 71/139 (51%), Frame = +1
Query: 1 DLKILGGLLCCPFFWGSKPIGSXAVEGHEXSLAMKV---WNFACPDAPGGIDNPWINPCV 171
D I G +L P+FW PI + + +L MK+ W A P++ G D+P +N
Sbjct: 186 DTGISGIILLHPYFWSKTPIDEKDTK--DETLRMKIEAFWMMASPNSKDGTDDPLLNVVQ 243
Query: 172 PGAPSLATLACSKLLVTITGKDXFRDRDILYHHTVXQSGWQGELQLFDAGDXXHAFXLFK 351
+ L+ L C K+LV + KD + Y + +SGW+GE+++ ++ H F L K
Sbjct: 244 SESVDLSGLGCGKVLVMVAEKDALVRQGWGYAAKLEKSGWKGEVEVVESEGEDHVFHLLK 303
Query: 352 PEXSSC*SHDQTLGFFSGLMDG 417
PE C + + + FSG + G
Sbjct: 304 PE---CDNAIEVMHKFSGFIKG 322
>gi|10120426|gb|AAG13051.1|AC011807_10 (AC011807) Hypothetical protein
[Arabidopsis thaliana]
Length = 374
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | 374
0 150 300
Plus Strand HSPs:
Score = 182 (64.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 36/121 (29%), Positives = 62/121 (51%), Frame = +1
Query: 7 KILGGLLCCPFFWGSKPIGSXAVEGHEXSLAM-KVWN-FACPDAPGGIDNPWINPCVPGA 180
+I G ++ P WG P+ V+ E + +VW P++ G D+PW N G+
Sbjct: 240 RIKGTVIVHPAIWGKDPVDEHDVQDREIRDGVAEVWEKIVSPNSVDGADDPWFNVVGSGS 299
Query: 181 PSLATLACSKLLVTITGKDXFRDRDILYHHTVXQSGWQGELQLFDAGDXXHAFXLFKPEX 360
+ + + C K+LV + GKD F + + Y + +SGW+GE+++ + D H F L P
Sbjct: 300 -NFSGMGCDKVLVEVAGKDVFWRQGLAYAAKLKKSGWKGEVEVIEEEDEEHCFHLLNPSS 358
Query: 361 SS 366
+
Sbjct: 359 EN 360
>gi|4335745|gb|AAD17422.1| (AC006284) putative esterase [Arabidopsis thaliana]
Length = 312
Frame 1 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | | 312
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 175 (61.6 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 38/122 (31%), Positives = 61/122 (50%), Frame = +1
Query: 1 DLKILGGLLCCPFFWGSKPIGSXAVEGHEXSLAMK-VWNFACPDAPGGIDNPWINPCVPG 177
D I G +L P+FW PI V + ++ W A P++ G+D+PW+N V
Sbjct: 179 DSLISGIILIHPYFWSKTPIDEFEVRDVGKTKGVEGSWRVASPNSKQGVDDPWLN-VVGS 237
Query: 178 APSLATLACSKLLVTITGKDXFRDRDILYHHTVXQSGWQGELQLFDAGDXXHAFXLFKPE 357
PS L C ++LV + G D F + Y + +SGW+GE+++ + + H F L P
Sbjct: 238 DPS--GLGCGRVLVMVAGDDLFVRQGWCYAEKLKKSGWEGEVEVMETKNEGHVFHLKNPN 295
Query: 358 XSS 366
+
Sbjct: 296 SDN 298
>gi|10120425|gb|AAG13050.1|AC011807_9 (AC011807) Hypothetical protein
[Arabidopsis thaliana]
Length = 315
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | | | 315
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 165 (58.1 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 33/113 (29%), Positives = 60/113 (53%), Frame = +1
Query: 10 ILGGLLCCPFFWGSKPIGSXAVE-GHEXSLAMKVW-NFACPDAPGGIDNPWINPCVPGAP 183
I G ++ P FWG +PI V+ G + +W N P++ G+++PW N G+
Sbjct: 182 IKGIVMVHPGFWGKEPIDEHDVQDGEVRNKIAYIWENIVSPNSVDGVNDPWFNVVGSGS- 240
Query: 184 SLATLACSKLLVTITGKDXFRDRDILYHHTVXQSGWQGELQLFDAGDXXHAFXL 345
++ + C K+LV + GKD F + + Y + +S W+G +++ + + H F L
Sbjct: 241 DVSEMGCEKVLVAVAGKDVFWRQGLAYAAKLEKSQWKGSVEVIEEEEEGHCFHL 294
>gi|10120427|gb|AAG13052.1|AC011807_11 (AC011807) Unknown protein [Arabidopsis
thaliana]
Length = 319
Frame 1 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | | 319
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 163 (57.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 38/120 (31%), Positives = 62/120 (51%), Frame = +1
Query: 1 DLKILGGLLCCPFFWGSKPIGSXAVEGHEXSLAM-KVWN-FACPDAPGGIDNPWINPCVP 174
DLKI G + P FWG+ P+ V+ E + ++W A P++ G D+P N V
Sbjct: 183 DLKIKGIAVVHPAFWGTDPVDEYDVQDKETRSGIAEIWEKIASPNSVNGTDDPLFN--VN 240
Query: 175 GAPS-LATLACSKLLVTITGKDXFRDRDILYHHTVXQSGWQGELQLFDAGDXXHAFXLFK 351
G+ S + L C K+LV + GKD F + + Y + + W+G +++ + H F L
Sbjct: 241 GSGSDFSGLGCDKVLVAVAGKDVFVRQGLAYAAKLEKCEWEGTVEVVEEEGEDHVFHLQN 300
Query: 352 PE 357
P+
Sbjct: 301 PK 302
>gi|8954057|gb|AAF82230.1|AC069143_6 (AC069143) Contains similarity to a PrMC3
from Pinus radiata gb|AF110333. [Arabidopsis thaliana]
Length = 318
Frame 1 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | | 318
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 151 (53.2 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 36/122 (29%), Positives = 59/122 (48%), Frame = +1
Query: 1 DLKILGGLLCCPFFWGSKPIGSXAVEGHEXSLAMKVWNFACPDAPGGIDNPWINPCVPGA 180
+ KI G +L P+F I VE ++W A PD+ G+++PWIN V G+
Sbjct: 185 NFKISGMILFHPYFLSKALIEEMEVEAMRYY--ERLWRIASPDSGNGVEDPWIN--VVGS 240
Query: 181 PSLATLACSKLLVTITGKDXFRDRDILYHHTVXQSGWQGELQLFDAGDXXHAFXLFKPEX 360
L L C ++LV + G D Y + +SGW G++++ + + H F L P+
Sbjct: 241 -DLTGLGCRRVLVMVAGNDVLARGGWSYVAELEKSGWIGKVKVMETKEEGHVFHLRDPDS 299
Query: 361 SS 366
+
Sbjct: 300 EN 301
>gi|11358445|pir||T46214 hypothetical protein T8P19.210 - Arabidopsis thaliana
>gi|6523101|emb|CAB62359.1| (AL133315) putative protein
[Arabidopsis thaliana]
Length = 329
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | 329
0 150 300
Plus Strand HSPs:
Score = 140 (49.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 38/136 (27%), Positives = 61/136 (44%), Frame = +1
Query: 10 ILGGLLCCPFFWGSKPIGSXAVEGHEXSLAMK-VWNFACPDAPGGIDNPWINPCVPGAPS 186
I G +L P+FW P+ ++ VW A P++ G D+P+IN +
Sbjct: 193 ISGIILVHPYFWSKTPVDDKETTDVAIRTWIESVWTLASPNSKDGSDDPFINVVQSESVD 252
Query: 187 LATLACSKLLVTITGKDXFRDRDILYHHTVXQSGWQGE-LQLFDAGDXXHAFXLFKPEXS 363
L+ L C K+LV + KD + Y + +S W GE L + + H F L P
Sbjct: 253 LSGLGCGKVLVMVAEKDALVRQGWGYWEKLGKSRWNGEVLDVVETKGEGHVFHLRDPNSE 312
Query: 364 SC*SHDQTLGFFSGLMDG 417
+H+ + F+G + G
Sbjct: 313 K--AHE-LVHRFAGFIKG 327
>gi|5487873|gb|AAD04946.2| (AF110333) PrMC3 [Pinus radiata]
Length = 319
Frame 1 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | | 319
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 125 (44.0 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 36/122 (29%), Positives = 58/122 (47%), Frame = +1
Query: 4 LKILGGLLCCPFFWGSKPIGSXAVEGHEXSLAMKV----WNFACPDAPGGI-DNPWINPC 168
LKI G ++ P+F + I V + + A+++ W A P PG D P NP
Sbjct: 181 LKIRGLIVIHPYFGSEERIECEKVAAGDDAAALELNDLFWRLALP--PGSDRDYPTCNPR 238
Query: 169 VPGAPSLATLACSKLLVTITGKDXFRDRDILYHHTVXQSGWQGELQLFDAGDXXHAFXLF 348
P + L + +LVT+ G D + R +LY+ + G + EL +A HA+ +F
Sbjct: 239 GPRSADLRKVPLPPVLVTVAGLDLLKTRGLLYYELLQSCGKEAELM--EAEGEIHAYHVF 296
Query: 349 KPEXSS 366
P +
Sbjct: 297 HPRSEA 302
>gi|10178113|dbj|BAB11406.1| (AP002543) gb|AAD04946.2~gene_id:F15M7.10~similar
to unknown protein [Arabidopsis thaliana]
Length = 329
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | 329
0 150 300
Plus Strand HSPs:
Score = 98 (34.5 bits), Expect = 0.10, P = 0.097
Identities = 34/140 (24%), Positives = 61/140 (43%), Frame = +1
Query: 4 LKILGGLLCCPFFWGSKPIGSXAVEGHEX-SLAM--KVWNFACPDAPGGIDNPWINPCVP 174
+++ G +L PFF G + S SL + K W + P+ D+ NP P
Sbjct: 192 VRVRGYVLMGPFFGGEERTNSENGPSEALLSLDLLDKFWRLSLPNGATR-DHHMANPFGP 250
Query: 175 GAPSLATLACSKLLVTITGKDXFRDRDILYHHTVXQSGWQGELQLFDAGDXXHAFXLFKP 354
+P+L +++ +LV + G + RDR Y + + + G + + + + H F P
Sbjct: 251 TSPTLESISLEPMLVIVGGSELLRDRAKEYAYKLKKMGGK-RVDYIEFENKEHGFYSNYP 309
Query: 355 EXSSC*SHDQTLGFFSGLMDGLS 423
+ +Q L M+ LS
Sbjct: 310 SSEAA---EQVLRIIGDFMNNLS 329
>gi|9294225|dbj|BAB02127.1| (AP000381) gene_id:K17E12.14~unknown protein
[Arabidopsis thaliana]
Length = 460
Frame 1 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | 460
0 150 300 450
Plus Strand HSPs:
Score = 93 (32.7 bits), Expect = 0.65, P = 0.48
Identities = 32/128 (25%), Positives = 55/128 (42%), Frame = +1
Query: 4 LKILGGLLCCPFFWGSKPIGSXAVEG----HEXSLAMKVWNFACPDAPGGIDNPWINPCV 171
+K++ +L PFF GS P S + ++ + + W P+ +D+ NP V
Sbjct: 312 VKVVAQVLMYPFFIGSVPTQSEIKQANSYFYDKPMCILAWKLFLPEEEFSLDHQAANPLV 371
Query: 172 PG-APSLATLACSKLLVTITGKDXFRDRDILYHHTVXQSGWQGELQLFDAGDXXHAFX-- 342
PG +P L + + L + D RDR I Y + + + + + D H F
Sbjct: 372 PGRSPPLKFMPPT--LTIVAEHDWMRDRAIAYSEELRKVNV--DAPVLEYKDAVHEFATL 427
Query: 343 ---LFKPEXSSC 369
L P+ +C
Sbjct: 428 DMLLRTPQAQAC 439
>gi|6729022|gb|AAF27018.1|AC009177_8 (AC009177) unknown protein [Arabidopsis
thaliana]
Length = 345
Frame 1 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 345
0 150 300
Plus Strand HSPs:
Score = 85 (29.9 bits), Expect = 3.7, P = 0.97
Identities = 28/103 (27%), Positives = 51/103 (49%), Frame = +1
Query: 4 LKILGGLLCCPFFWGSKPIGSX-AVEG-HEXSLAMKVWNFACPDAPGGID--NPWINPCV 171
+ +LG +L P F G++ S +++G + ++ + W + P G D +P NP
Sbjct: 209 IDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKA-FLPEGEDREHPACNPFS 267
Query: 172 PGAPSLATLACSKLLVTITGKDXFRDRDILYHHTVXQSGWQGEL 303
P SL ++ K LV + G D RD + Y + ++G + +L
Sbjct: 268 PRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKL 311
>gi|924294|gb|AAA73638.1| (U13445) envelope glycoprotein V1V2 region [Human
immunodeficiency virus type 1]
Length = 86
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | 86
0 20 40 60 80
Plus Strand HSPs:
Score = 63 (22.2 bits), Expect = 4.8, P = 0.99
Identities = 14/32 (43%), Positives = 18/32 (56%), Frame = +1
Query: 157 INPCVPGAPSLATLACSKLLVTITG-KDXFRD 249
+ PCV P TL CS + V ITG K+ +D
Sbjct: 3 LKPCVKLTPLCVTLNCSNVNVNITGNKEEIKD 34
>gi|3929374|sp|P56624|SGP3_THIRO SULFUR GLOBULE PROTEIN TR2
>gi|1087062|gb|AAB35301.1| Tr2=8.6 kda sulfur globule protein
{N-terminal} [Thiocapsa roseopersicina, SMG219, Peptide Partial, 40
aa]
Length = 40
Frame 1 hits (HSPs): __________ ______________
__________________________________________________
Database sequence: | | | 40
0 20
Plus Strand HSPs:
Score = 38 (13.4 bits), Expect = 9.1, Sum P(2) = 1.0
Identities = 6/8 (75%), Positives = 6/8 (75%), Frame = +1
Query: 40 FWGSKPIG 63
FWGS P G
Sbjct: 1 FWGSGPFG 8
Score = 38 (13.4 bits), Expect = 9.1, Sum P(2) = 1.0
Identities = 6/11 (54%), Positives = 7/11 (63%), Frame = +1
Query: 133 PGGIDNPWINP 165
PGG PW +P
Sbjct: 11 PGGWGGPWNSP 21
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.89
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.356 0.161 0.688
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.344 0.149 0.504
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.334 0.150 0.512
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.348 0.154 0.549
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.337 0.148 0.454
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.341 0.147 0.510
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 203 186 10. 76 3 12 22 0.12 34
31 0.12 37
+2 0 204 187 10. 76 3 12 22 0.12 34
31 0.12 37
+1 0 204 190 10. 76 3 12 22 0.12 34
31 0.097 38
-1 0 204 188 10. 76 3 12 22 0.12 34
31 0.12 37
-2 0 204 188 10. 76 3 12 22 0.12 34
31 0.12 37
-3 0 203 192 10. 76 3 12 22 0.12 34
31 0.098 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 14
No. of states in DFA: 598 (59 KB)
Total size of DFA: 218 KB (256 KB)
Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 192.23u 1.03s 193.26t Elapsed: 00:00:56
Total cpu time: 192.26u 1.05s 193.31t Elapsed: 00:00:56
Start: Mon Oct 1 17:03:59 2001 End: Mon Oct 1 17:04:55 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000