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Actinobacillus actinomycetemcomitans Search Results

Record: 1 of 1  
MiniMap IGR1604 IGR1607 IGR1610 IGR1608 IGR1609 IGR1605 IGR1606 AA02455 yeaL, - AA02456 nagB, - AA02465 omp34, - AA02458 nagA, - AA02463 hrpA, - AA02454 AA02464 tpx, - AA02462 hemH, - AA02461 ydiJ, - AA02459 AA02455 yeaL, - AA02456 nagB, - AA02465 omp34, - AA02458 nagA, - AA02463 hrpA, - AA02454 AA02464 tpx, - AA02462 hemH, - AA02461 ydiJ, - AA02459 yeaL, - AA02456 omp34, - AA02458 nagA, - AA02463 hrpA, - AA02454 ydhD, - AA02457 ydhD, - AA02457 AA02455 AA02464 tpx, - AA02462 hemH, - AA02461 ydiJ, - AA02459 ydiI, - AA02460 ydiI, - AA02460


Gene ID:AA02459

DNA Molecule Name:
1  

GenBank ID:


Gene Name:
ydiJ  

Definition:
conserved hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
1697608

Gene Stop:
1700703

Gene Length:
3096

Molecular Weight*:
116871

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown  

Gene Ontology:
Biological process
  GO:0006118    electron transport

Molecular function
  GO:0009055    electron carrier activity
  GO:0051536    iron-sulfur cluster binding


Pathway: pathway table

Comment:


View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search


Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|46156344|ref|ZP_00132928.2|  COG0277: FAD/FMN-containing ...  1715   0.0  
 gi|113461187|ref|YP_719256.1|  hypothetical protein HS_1044 ...  1714   0.0  
 gi|145639316|ref|ZP_01794922.1|  conserved FAD/FMN-containin...  1692   0.0  
 gi|52425276|ref|YP_088413.1|  GlcD protein [Mannheimia succi...  1691   0.0  
 gi|148828319|ref|YP_001293072.1|  hypothetical protein CGSHi...  1689   0.0  
 gi|145635013|ref|ZP_01790719.1|  hypothetical protein CGSHiA...  1686   0.0  
 gi|145627862|ref|ZP_01783663.1|  hypothetical protein CGSHi2...  1685   0.0  
 gi|145633106|ref|ZP_01788838.1|  hypothetical protein CGSHi3...  1685   0.0  
 gi|46128992|ref|ZP_00155773.2|  COG0277: FAD/FMN-containing ...  1684   0.0  
 gi|16273087|ref|NP_439321.1|  hypothetical protein HI1163 [H...  1684   0.0


InterPro Summary:  InterProScan

InterPro
IPR001450
Domain
4Fe-4S ferredoxin, iron-sulfur binding
PS00198 [676-687]T 8e-5 PS00198 4FE4S_FERREDOXIN 4FE4S_FERREDOXIN
InterPro
IPR004113
Domain
FAD linked oxidase, C-terminal
PF02913 [286-544]T 1.1e-61 PF02913 FAD-oxidase_C FAD-oxidase_C
InterPro
IPR006094
Domain
FAD linked oxidase, N-terminal
PF01565 [54-195]T 2.8e-47 PF01565 FAD_binding_4 FAD_binding_4
noIPR
unintegrated
unintegrated
G3DSA:3.30.465.20 [111-194]T 2.4e-06 G3DSA:3.30.465.20 no description no description
PTHR11748 [26-194]T 6e-189 PTHR11748 D-LACTATE DEHYDROGENASE[248-593]T 6e-189 PTHR11748 D-LACTATE DEHYDROGENASE D-LACTATE DEHYDROGENASE
PTHR11748:SF4 [26-194]T 6e-189 PTHR11748:SF4 OXIDOREDUCTASE[248-593]T 6e-189 PTHR11748:SF4 OXIDOREDUCTASE OXIDOREDUCTASE


COGS Summary:  COGS Search
No hits to the COGs database.
Blocks Summary:  Blocks Search


 ProDom Summary:  Protein Domain Search

Residues 546 to 589 match (4e-13) PD:PD590370 which is described as PROTEOME COMPLETE HI1163 VC1198 PM0787

Paralogs:  Local Blast Search

AA02459 has no significant similarity (blastp p-value < 1e-3) to any other gene in this genome.


Pfam Summary:  Pfam Search

Residues 286 to 544 (E-value = 1.5e-61) place AA02459 in the FAD-oxidase_C family which is described as FAD linked oxidases, C-terminal domain (PF02913)


 Top PDB Hits:


Gene Protein Sequence:
MQILPRLKNVPQCSPLVKNYLNALYRQHFEGDISSNYADRLSLATDNSVY
QQLPQAILFPKTVADVVRLTKLAQQEKYLPLTFTPRGGGTGTNGQSINNN
IIVDLSRHMTKILELNVKERWVRVQAGVVKDQLNQFLKPHGLFFSPELST
SNRATLGGMINTDASGQGSLQYGKTSDHVLGLRAVLMNGEILDTSAVKSD
DVFHAIEESHLSANGKKIHQEIFQRCKENREQIINDLPQLNRFLTGYDLK
NVFNDDLSEFNLTRILTGSEGSLAFICEAVLDLTPIPQYRTLINIKYSSF
DAALRNAPFMVKANALSVETVDSKVLNLAKQDIIWHSVKALLTEEEQNPI
LGLNIVEYAGNNQALIENQVSQLCATLDQKIADGQDHIIGYQVCSDLPSI
ERIYAMRKKAVGLLGNAKGVAKPIPFVEDTCVPPENLADYISEFRALLDS
HKLQYGMFGHVDAGVLHVRPALDLCAPEQVKLFKRISDQVADLTRKYGGL
IWGEHGKGMRSQYGEKFFTPALWRELRYIKFLFDPQNRLNPGKICTPLGS
EQEPYTILSPMRADLDRQIPIQMKQEFIGAMNCNGNGLCFNFDVHSAMCP
SMKVSKNRIFSPKGRAAMIREWLRLLANEQIRPEQLDFRQSTMKLTNIVK
KIQNSRKKRRGEYDFSHEVKAAMDTCLACKACASQCPIKIDVPNFRSKFF
HFYHQRYLRPIKDYVVSNVEFIAPLMAKQAKFFNYFTTAKVSQKAAEKYL
GMTDLPLLSTPNLQQQLIQIGHKNDSLETLERLSAVEKQNVLLIVQDPFT
SYYDAKVVVDFVALTEKLGFKAVLLPFKPNGKAQHIKGFLTRFAKTAKNQ
ADFLNRMAKLGLPLVGVDPAIVLSYRDEYKEILGTERGDFHVLTAHEWLK
QQLDNGTLLQHMKNAGKNDRTFEPHQWYLFPHCTEITAMPNSAKEWQQIF
AAFTQQLQVESVGRCGMAGTFGHETQHIDMSKAIYVSSWEQKLQNRKPDY
CLATGYSCRSQVKRFAHYQPKHPVQALLTLFK

Gene Nucleotide Sequence:  Sequence Viewer
ATGCAAATACTACCTCGTTTAAAAAATGTTCCCCAGTGTTCTCCTTTGGT
TAAAAATTATTTGAATGCTCTGTACCGACAACACTTTGAAGGCGATATTT
CGTCTAATTATGCCGATCGTTTGAGCTTAGCCACCGACAACAGTGTTTAT
CAGCAACTGCCACAAGCCATTTTGTTCCCTAAAACCGTCGCCGATGTGGT
ACGTCTGACCAAATTGGCACAACAGGAAAAATACCTTCCGCTGACCTTTA
CCCCGCGCGGCGGTGGCACAGGAACCAATGGGCAATCCATCAATAACAAT
ATTATTGTGGACTTATCCCGCCACATGACGAAAATTTTAGAACTCAACGT
CAAAGAACGTTGGGTGCGCGTGCAAGCGGGCGTGGTGAAAGATCAGCTTA
ATCAGTTCCTCAAACCGCACGGTTTATTTTTCTCGCCGGAGCTTTCTACC
AGCAACCGTGCCACTTTGGGCGGTATGATCAATACGGATGCTTCCGGGCA
AGGCTCCTTGCAATACGGCAAAACCTCCGACCATGTTTTGGGATTGCGTG
CCGTATTAATGAATGGCGAAATTCTGGACACAAGTGCGGTCAAATCTGAC
GACGTTTTTCATGCGATAGAAGAAAGTCATTTATCTGCCAACGGGAAAAA
AATCCATCAGGAAATTTTCCAACGTTGCAAAGAAAACCGTGAACAAATCA
TTAATGATTTACCGCAATTGAACCGTTTTCTCACCGGTTATGATTTGAAG
AATGTTTTTAACGATGATTTAAGCGAATTCAATTTAACCCGCATTCTCAC
CGGCTCGGAAGGTTCCCTCGCCTTTATTTGTGAAGCAGTGCTGGATTTAA
CGCCGATTCCGCAATATCGTACCTTAATTAACATTAAATACAGTTCCTTT
GACGCGGCGTTGCGTAATGCGCCGTTTATGGTGAAAGCCAATGCCCTTTC
CGTGGAAACCGTGGATTCCAAGGTGTTGAATCTGGCGAAGCAGGACATTA
TTTGGCACTCGGTGAAAGCACTCTTAACAGAAGAAGAGCAAAATCCGATT
CTCGGCTTAAATATAGTGGAATATGCCGGCAATAACCAGGCGCTCATTGA
AAATCAAGTGTCTCAATTATGTGCGACATTAGATCAAAAAATCGCCGACG
GGCAGGATCATATCATCGGCTATCAAGTGTGTTCCGATTTGCCTTCTATC
GAACGAATTTACGCCATGCGCAAAAAAGCTGTGGGCTTGTTGGGTAATGC
CAAAGGCGTAGCGAAACCTATCCCTTTTGTGGAAGACACCTGCGTGCCGC
CGGAGAATCTGGCGGACTATATTAGTGAATTCCGCGCCTTGTTGGATAGC
CATAAGCTGCAATACGGTATGTTCGGACACGTGGACGCGGGCGTGTTACA
CGTACGCCCGGCGTTAGATTTATGCGCTCCGGAACAAGTGAAACTGTTCA
AACGAATTTCCGACCAAGTGGCGGACTTAACCCGCAAATACGGCGGTTTA
ATTTGGGGTGAACACGGCAAAGGTATGCGTTCGCAATACGGCGAAAAATT
CTTCACACCGGCACTATGGCGTGAGTTACGTTACATCAAATTCCTGTTCG
ATCCGCAAAACCGCTTAAATCCGGGGAAAATCTGCACCCCGCTGGGCAGC
GAGCAAGAACCCTACACCATTTTATCGCCGATGCGCGCCGATTTGGATCG
TCAAATTCCTATTCAAATGAAACAAGAATTTATCGGCGCCATGAATTGTA
ATGGCAACGGATTATGCTTTAACTTTGACGTGCACAGCGCCATGTGCCCG
TCCATGAAAGTGAGCAAAAACCGTATTTTTTCACCGAAAGGACGCGCTGC
GATGATTCGCGAATGGTTGCGTTTATTGGCAAATGAACAAATTCGCCCGG
AACAACTGGATTTCAGACAATCCACAATGAAACTCACGAATATCGTGAAA
AAAATCCAAAACAGCCGCAAAAAACGTCGTGGCGAATATGATTTTTCCCA
TGAAGTGAAAGCCGCCATGGATACTTGCCTTGCCTGTAAAGCCTGCGCCA
GTCAATGTCCGATTAAAATTGATGTGCCGAATTTCCGTTCTAAATTCTTC
CATTTTTATCACCAACGCTACTTGCGCCCGATAAAAGATTATGTGGTGTC
CAATGTAGAATTTATTGCGCCGCTGATGGCAAAACAGGCGAAATTCTTCA
ATTATTTTACCACGGCAAAAGTGAGCCAAAAGGCGGCGGAAAAATATTTA
GGCATGACGGATTTGCCGTTGTTGTCCACGCCGAATTTGCAGCAGCAACT
CATTCAAATCGGACATAAAAATGATTCCTTGGAAACACTGGAACGCCTAA
GTGCGGTGGAAAAACAAAATGTTTTACTCATCGTGCAGGATCCTTTTACC
TCTTATTATGATGCCAAAGTGGTTGTCGATTTTGTGGCGCTGACCGAAAA
ATTAGGATTTAAAGCAGTGTTATTGCCATTCAAACCGAATGGTAAAGCAC
AACACATCAAAGGCTTTTTAACCCGTTTTGCGAAAACCGCGAAAAATCAG
GCGGACTTTCTTAATCGCATGGCGAAGCTAGGCTTGCCATTGGTAGGCGT
GGATCCGGCGATTGTGTTATCTTATCGCGATGAGTATAAAGAAATCCTAG
GGACAGAACGGGGGGATTTCCATGTGCTGACTGCACACGAATGGCTAAAA
CAACAGCTTGATAACGGCACGTTGTTGCAGCACATGAAAAACGCCGGGAA
AAATGACCGCACTTTTGAGCCGCATCAGTGGTATTTATTCCCGCATTGCA
CGGAAATCACCGCAATGCCGAACAGCGCAAAAGAATGGCAGCAAATTTTT
GCCGCGTTCACTCAACAGTTACAGGTCGAAAGCGTGGGTCGTTGCGGTAT
GGCGGGCACTTTCGGGCATGAAACCCAACACATCGACATGTCGAAAGCTA
TTTATGTATCTTCGTGGGAGCAAAAACTGCAAAATAGAAAGCCTGACTAT
TGTTTGGCCACCGGTTATTCCTGTCGCAGTCAAGTTAAACGTTTCGCCCA
TTATCAGCCAAAACACCCTGTGCAAGCCTTATTAACTTTATTTAAA

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