R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|485515|pir||S33622 ADR6 protein - soybean >gi|296445|emb|CAA49340.1|
(X69639) auxin down regulated [Glycine max]
>gi|2304955|gb|AAB65592.1| (U64866) similar to ADR6 encoded by
GenBank Accession Number X69639; aluminum induced [Glycine max]
Length = 272
Frame 3 hits (HSPs): ___________________________
Annotated Domains: _____________________________________________
__________________________________________________
Database sequence: | | | | | | | 272
0 50 100 150 200 250
__________________
Annotated Domains:
DOMO DM02982: 18..258
__________________
Plus Strand HSPs:
Score = 605 (213.0 bits), Expect = 5.8e-58, P = 5.8e-58
Identities = 120/145 (82%), Positives = 124/145 (85%), Frame = +3
Query: 3 KTFFYKEDLHPGKTMKVQFSKPPFQQPWGVGTWLKEIKDTTKEGYSFEELCIKKEAIEGE 182
KTFFYKEDLHPGKTMKVQFSKPPFQQPWGVGTWLKEIKDTTKEGYSFEELCIKKEAIEGE
Sbjct: 70 KTFFYKEDLHPGKTMKVQFSKPPFQQPWGVGTWLKEIKDTTKEGYSFEELCIKKEAIEGE 129
Query: 183 EKFCAKSLGTVIGFAISKLGKNIQVLSSSFVNKQDQYTVEGVXNXGDKAVMLSXAKFXNC 362
EKFCAKSLGTVIGFAISKLGKNIQVLSSSFVNKQDQYTVEGV N GDKAVM F
Sbjct: 130 EKFCAKSLGTVIGFAISKLGKNIQVLSSSFVNKQDQYTVEGVQNLGDKAVMCHRLNFRTA 189
Query: 363 QYFTAXNP*TTAFMVPSVVVMDPTQ 437
++ TTAFMVP +V D T+
Sbjct: 190 VFYCHEVRETTAFMVP-LVAGDGTK 213
>gi|7488713|pir||T08896 Sali3-2 protein, aluminium-induced - soybean
>gi|2317900|gb|AAB66369.1| (U89693) Sali3-2 [Glycine max]
Length = 276
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | | | 276
0 50 100 150 200 250
Plus Strand HSPs:
Score = 539 (189.7 bits), Expect = 5.7e-51, P = 5.7e-51
Identities = 107/145 (73%), Positives = 119/145 (82%), Frame = +3
Query: 3 KTFFYKEDLHPGKTMKVQFSKPPFQQPWGVGTWLKEIKDTTKEGYSFEELCIKKEAIEGE 182
KTFFYKEDLHPGKTMKVQF+K P+ QP+GV TWL +IKDT+KEGYSFEE+CIKKEA EGE
Sbjct: 74 KTFFYKEDLHPGKTMKVQFTKRPYAQPYGVYTWLTDIKDTSKEGYSFEEICIKKEAFEGE 133
Query: 183 EKFCAKSLGTVIGFAISKLGKNIQVLSSSFVNKQDQYTVEGVXNXGDKAVMLSXAKFXNC 362
EKFCAKSLGTVIGFAISKLGKNIQVLSSSFVNKQ+QYTVEGV N GDKAVM F
Sbjct: 134 EKFCAKSLGTVIGFAISKLGKNIQVLSSSFVNKQEQYTVEGVQNLGDKAVMCHGLNFRTA 193
Query: 363 QYFTAXNP*TTAFMVPSVVVMDPTQ 437
++ TTAF+VP +V D T+
Sbjct: 194 VFYCHKVRETTAFVVP-LVAGDGTK 217
>gi|2129886|pir||S70755 hypothetical protein - garden pea
>gi|20914|emb|CAA38756.1| (X55012) unknown seed protein [Pisum
sativum]
Length = 221
Frame 3 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 180 (63.4 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 56/147 (38%), Positives = 73/147 (49%), Frame = +3
Query: 6 TFFYKEDLHPGKTMKVQFSKP------PFQQP-WGV--GTWLKEIKDTTKEGYSFEELCI 158
T F++ DLHPGK + S P PF++ GV WL K+ S E+ C
Sbjct: 33 TLFFEHDLHPGKKFVLGNSHPVGNIIRPFRKSRQGVTDSIWL-----ANKDEQSLEDFCY 87
Query: 159 KKEAIEGEEKFCAKSLGTVIGFAISKLGKN-IQVLSSSFVNKQDQYTVEGVXNXGDKAVM 335
AI E K C SL ++I IS G I+ +SS+F QDQY VE V + AVM
Sbjct: 88 SPTAI-AEHKHCVSSLNSMIDEVISHFGTTKIKAISSNFAQNQDQYDVEEVKKVSENAVM 146
Query: 336 LSXAKFXNCQYFTAXNP*TTAFMVPSVVVMDPTQ 437
F N + TTA+MV S+V D T+
Sbjct: 147 CHRLNFENVVFNCHQVSKTTAYMV-SLVASDGTK 179
>gi|100102|pir||S14068 seed protein precursor - tick bean
>gi|22043|emb|CAA39696.1| (X56240) unknown seed protein [Vicia
faba]
Length = 268
Frame 3 hits (HSPs): ____________________________
Annotated Domains: ____
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez domain: signal sequence 1..22
__________________
Plus Strand HSPs:
Score = 172 (60.5 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 55/147 (37%), Positives = 71/147 (48%), Frame = +3
Query: 6 TFFYKEDLHPGKTMKVQFSKP------PFQQP-WGV--GTWLKEIKDTTKEGYSFEELCI 158
T F++ DLHPGK + + PF + GV WL KE S E+ C
Sbjct: 67 TLFFEHDLHPGKNFNLGHTNSVGSIIRPFTKSRQGVTDSIWL-----ANKEKQSLEDFCY 121
Query: 159 KKEAIEGEEKFCAKSLGTVIGFAISKLGKN-IQVLSSSFVNKQDQYTVEGVXNXGDKAVM 335
AI E K C SL ++I IS G I+ +SS+F QDQY VE V GD AVM
Sbjct: 122 SPTAI-AEHKHCVSSLKSMIDQVISHFGSTKIKAISSNFAPYQDQYVVEDVKKVGDNAVM 180
Query: 336 LSXAKFXNCQYFTAXNP*TTAFMVPSVVVMDPTQ 437
F + TTA++V S+V D T+
Sbjct: 181 CHRLNFEKVVFNCHQVRDTTAYVV-SLVASDGTK 213
>gi|119097|sp|P21747|EA92_VICFA EMBRYONIC ABUNDANT PROTEIN USP92 PRECURSOR
>gi|82002|pir||S04136 embryonic abundant protein precursor (clone
pUSP92) - tick bean >gi|22051|emb|CAA31602.1| (X13210) USP
precursor [Vicia faba]
Length = 268
Frame 3 hits (HSPs): ____________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez Domain: 3 X 6 AA APPROXIMATE REPEATS. 50..106
Entrez Repetitive region: 1-1. 50..55
Entrez Repetitive region: 1-2. 83..88
Entrez Repetitive region: 1-3. 101..106
Entrez Domain: 2 X APPROXIMATE REPEATS. 166..222
Entrez Repetitive region: 2-1. 166..183
Entrez Repetitive region: 2-2. 202..222
Entrez glycosylation site: POTENTIAL. 259
PRODOM PD009870: 1..79
PRODOM PD013884: 86..126
PRODOM PD004669: 128..256
__________________
Plus Strand HSPs:
Score = 171 (60.2 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 57/147 (38%), Positives = 71/147 (48%), Frame = +3
Query: 6 TFFYKEDLHP------GKTMKVQFSKPPFQQP-WGV--GTWLKEIKDTTKEGYSFEELCI 158
T F++ DLHP G T V PF + GV WL KE SFE+ C
Sbjct: 67 TLFFEHDLHPRKNFILGNTNSVGSIIRPFTKSRQGVTDSIWL-----ANKEKQSFEDFCY 121
Query: 159 KKEAIEGEEKFCAKSLGTVIGFAISKLGKN-IQVLSSSFVNKQDQYTVEGVXNXGDKAVM 335
AI E K C SL ++I IS G I+ +SS+F QDQY VE V GD AVM
Sbjct: 122 SPTAI-AEHKHCVSSLKSMIDQVISHFGSTKIKAISSNFAPYQDQYVVEDVKKVGDNAVM 180
Query: 336 LSXAKFXNCQYFTAXNP*TTAFMVPSVVVMDPTQ 437
F + TTA++V S+V D T+
Sbjct: 181 CHRLNFEKVVFNCHQVRETTAYVV-SLVASDGTK 213
>gi|119095|sp|P21745|EA30_VICFA EMBRYONIC ABUNDANT PROTEIN VF30.1 PRECURSOR
>gi|82003|pir||S05471 embryonic abundant protein precursor (clone
USP Vf30.1) - tick bean
Length = 268
Frame 3 hits (HSPs): ____________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
__________________
Annotated Domains:
DOMO DM02982: 17..258
Entrez Domain: 3 X 6 AA APPROXIMATE REPEATS. 50..106
Entrez Repetitive region: 1-1. 50..55
Entrez Repetitive region: 1-2. 83..88
Entrez Repetitive region: 1-3. 101..106
Entrez Domain: 2 X APPROXIMATE REPEATS. 166..222
Entrez Repetitive region: 2-1. 166..183
Entrez Repetitive region: 2-2. 202..222
Entrez glycosylation site: POTENTIAL. 259
PRODOM PD009870: 1..79
PRODOM PD013884: 86..126
PRODOM PD004669: 128..256
__________________
Plus Strand HSPs:
Score = 170 (59.8 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 57/147 (38%), Positives = 71/147 (48%), Frame = +3
Query: 6 TFFYKEDLHPGK------TMKVQFSKPPFQQP-WGV--GTWLKEIKDTTKEGYSFEELCI 158
T F++ DLHPGK T V PF + GV WL KE S E+ C
Sbjct: 67 TLFFEHDLHPGKNFILGNTNSVGSIIRPFTKSRQGVTDSIWL-----ANKEKQSLEDFCY 121
Query: 159 KKEAIEGEEKFCAKSLGTVIGFAISKLGKN-IQVLSSSFVNKQDQYTVEGVXNXGDKAVM 335
AI E K C SL ++I IS G I+ +SS+F QDQY VE V GD AVM
Sbjct: 122 SPTAI-AEHKHCVSSLKSMIDQVISHFGSTKIKAISSNFAPYQDQYVVEDVKKVGDNAVM 180
Query: 336 LSXAKFXNCQYFTAXNP*TTAFMVPSVVVMDPTQ 437
F + TTA++V S+V D T+
Sbjct: 181 CHRLNFEKVVFNCHQVRDTTAYVV-SLVASDGTK 213
>gi|135067|sp|P09059|SVF3_VICFA UNKNOWN SEED PROTEIN 30.1 PRECURSOR (VF30.1)
>gi|82000|pir||S03328 embryonic abundant protein precursor (clone
pUSP14) - tick bean >gi|22046|emb|CAA31626.1| (X13242) seed protein
[Vicia faba]
Length = 268
Frame 3 hits (HSPs): ____________________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
__________________
Annotated Domains:
PRODOM PD009870: 1..79
PRODOM PD013884: 86..126
PRODOM PD004669: 128..256
__________________
Plus Strand HSPs:
Score = 165 (58.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 56/147 (38%), Positives = 70/147 (47%), Frame = +3
Query: 6 TFFYKEDLHP------GKTMKVQFSKPPFQQP-WGV--GTWLKEIKDTTKEGYSFEELCI 158
T F++ DLHP G T V PF + GV WL KE S E+ C
Sbjct: 67 TLFFEHDLHPRKNFILGNTNSVGSIIRPFTKSRQGVTDSIWL-----ANKEKQSLEDFCY 121
Query: 159 KKEAIEGEEKFCAKSLGTVIGFAISKLGKN-IQVLSSSFVNKQDQYTVEGVXNXGDKAVM 335
AI E K C SL ++I IS G I+ +SS+F QDQY VE V GD AVM
Sbjct: 122 SPTAI-AEHKHCVSSLKSMIDQVISHFGSTKIKAISSNFAPYQDQYVVEDVKKVGDNAVM 180
Query: 336 LSXAKFXNCQYFTAXNP*TTAFMVPSVVVMDPTQ 437
F + TTA++V S+V D T+
Sbjct: 181 CHRLNFEKVVFNCHQVRDTTAYVV-SLVASDGTK 213
>gi|119096|sp|P21746|EA87_VICFA EMBRYONIC ABUNDANT PROTEIN USP87 PRECURSOR
>gi|82001|pir||S04135 embryonic abundant protein precursor (clone
pUSP87) - tick bean >gi|22049|emb|CAA31603.1| (X13211) USP
precursor [Vicia faba]
Length = 268
Frame 3 hits (HSPs): ____________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez Domain: 3 X 6 AA APPROXIMATE REPEATS. 50..106
Entrez Repetitive region: 1-1. 50..55
Entrez Repetitive region: 1-2. 83..88
Entrez Repetitive region: 1-3. 101..106
Entrez Domain: 2 X APPROXIMATE REPEATS. 166..222
Entrez Repetitive region: 2-1. 166..183
Entrez Repetitive region: 2-2. 202..222
Entrez glycosylation site: POTENTIAL. 259
PRODOM PD009870: 1..79
PRODOM PD013884: 86..126
PRODOM PD004669: 128..256
__________________
Plus Strand HSPs:
Score = 165 (58.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 56/147 (38%), Positives = 70/147 (47%), Frame = +3
Query: 6 TFFYKEDLHP------GKTMKVQFSKPPFQQP-WGV--GTWLKEIKDTTKEGYSFEELCI 158
T F++ DLHP G T V PF + GV WL KE S E+ C
Sbjct: 67 TLFFEHDLHPRKNFILGNTNSVGSIIRPFTKSRQGVTDSIWL-----ANKEKQSLEDFCY 121
Query: 159 KKEAIEGEEKFCAKSLGTVIGFAISKLGKN-IQVLSSSFVNKQDQYTVEGVXNXGDKAVM 335
AI E K C SL ++I IS G I+ +SS+F QDQY VE V GD AVM
Sbjct: 122 SPTAI-AEHKHCVSSLKSMIDQVISHFGSTKIKAISSNFAPYQDQYVVEDVKKVGDNAVM 180
Query: 336 LSXAKFXNCQYFTAXNP*TTAFMVPSVVVMDPTQ 437
F + TTA++V S+V D T+
Sbjct: 181 CHRLNFEKVVFNCHQVRDTTAYVV-SLVASDGTK 213
>gi|7488827|pir||T06815 probable embryonic abundant protein - garden pea
(fragment) >gi|20912|emb|CAA38755.1| (X55011) internal part of pea
Unknown Seed Protein (USP) [Pisum sativum]
Length = 221
Frame 3 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 151 (53.2 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 52/144 (36%), Positives = 69/144 (47%), Frame = +3
Query: 6 TFFYKEDLHPGKTMKVQFSKP------PFQQP-WGV--GTWLKEIKDTTKEGYSFEELCI 158
T F++ DLHPGK + S P PF++ GV WL K+ S E+ C
Sbjct: 33 TLFFEHDLHPGKKFVLGNSHPVGNIIRPFRKSRQGVTDSIWL-----ANKDEQSLEDFCY 87
Query: 159 KKEAIEGEEKFCAKSLGTVIGFAISKLGKN-IQVLSSSFVNKQDQYTVEGVXNXGDKAVM 335
AI E K C SL ++I IS G+ I+ +SS+ QDQY E V + AVM
Sbjct: 88 SPTAI-AEHKHCVSSLNSMIDEVISHFGQTKIKAISSNSAQNQDQYAWEEVKIVTENAVM 146
Query: 336 LSXAKFXNCQYFTAXNP*TTAFMVPSVVVMD 428
N + TTA+MV S+V D
Sbjct: 147 CHRLNSDNVVFNCHQVSKTTAYMV-SLVASD 176
>gi|1172874|sp|Q08298|RD22_ARATH DEHYDRATION-RESPONSIVE PROTEIN RD22 PRECURSOR
>gi|479589|pir||S34823 dehydration-induced protein RD22 -
Arabidopsis thaliana >gi|391608|dbj|BAA01546.1| (D10703) rd22
[Arabidopsis thaliana] >gi|447134|prf||1913421A rd22 gene
[Arabidopsis thaliana]
Length = 392
Frame 3 hits (HSPs): ___________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 392
0 150 300
__________________
Annotated Domains:
DOMO DM02982: 118..391
Entrez Domain: 5 X APPROXIMATE REPEATS. 57..164
Entrez Repetitive region: 1. 57..75
Entrez Repetitive region: 2. 78..97
Entrez Repetitive region: 3. 100..120
Entrez Repetitive region: 4. 125..142
Entrez Repetitive region: 5. 145..164
PRODOM PD122867: RD22_ARATH 1..167
PRODOM PD004669: 169..390
__________________
Plus Strand HSPs:
Score = 115 (40.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 43/146 (29%), Positives = 72/146 (49%), Frame = +3
Query: 12 FYKEDLHPGKTMKVQFSKPPFQQPWGVGTWLKEIKDTTKEGYSFEELCIKK-----EA-- 170
F ED + GKT + + P+G + + +K + E S E +KK EA
Sbjct: 192 FNAEDGYGGKTAFLPRGEAE-TVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARK 250
Query: 171 IEGEEKFCAKSLGTVIGFAISKLGK-NIQVLSSSFVNKQ---DQYTVE--GVXNXGD-KA 329
+ GEEK+CA SL +++ F++SKLGK +++ +S+ K +Y + GV D K+
Sbjct: 251 VSGEEKYCATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKS 310
Query: 330 VMLSXAKFXNCQYFTAXNP*TTAFMVP 410
V+ K+ ++ TT + VP
Sbjct: 311 VVCHKQKYPFAVFYCHKAMMTTVYAVP 337
>gi|7106540|dbj|BAA92225.1| (AB038692) similar to the BURP domain [Vigna
unguiculata]
Length = 132
Frame 3 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | 132
0 50 100
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.068, P = 0.066
Identities = 26/76 (34%), Positives = 41/76 (53%), Frame = +3
Query: 195 AKSLGTVIGFAISKLGKNIQVLSSSFVNKQ---DQYTVE-GVXN-XGDKAVMLSXAKFXN 359
A SL +++ F+ SKLGKN+ VLS+ V+++ QYT+ GV GD AV+ +
Sbjct: 2 ATSLESMVDFSTSKLGKNVAVLSTE-VDQETGLQQYTIAPGVKKVSGDNAVVCHKQSYPY 60
Query: 360 CQYFTAXNP*TTAFMVP 410
++ T + VP
Sbjct: 61 AVFYCHKTETTRTYPVP 77
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.97
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.321 0.138 0.432
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.352 0.154 0.570
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.342 0.146 0.524
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.353 0.161 0.575
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.345 0.152 0.544
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.341 0.147 0.503
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 160 154 10. 74 3 12 22 0.095 34
30 0.12 36
+2 0 160 155 10. 74 3 12 22 0.096 34
30 0.12 36
+1 0 161 155 10. 74 3 12 22 0.096 34
30 0.12 36
-1 0 161 155 10. 74 3 12 22 0.096 34
30 0.12 36
-2 0 160 153 10. 74 3 12 22 0.095 34
30 0.12 36
-3 0 160 154 10. 74 3 12 22 0.095 34
30 0.12 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 11
No. of states in DFA: 593 (58 KB)
Total size of DFA: 204 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 164.51u 1.07s 165.58t Elapsed: 00:00:28
Total cpu time: 164.55u 1.08s 165.63t Elapsed: 00:00:29
Start: Wed Oct 3 10:04:46 2001 End: Wed Oct 3 10:05:15 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000