R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 154 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|6578120|gb|AAF17703.1|AF031082_1 (AF031082) glutamine synthetase [Canavalia
lineata]
Length = 430
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 430
0 150 300
Plus Strand HSPs:
Score = 386 (135.9 bits), Expect = 2.1e-75, Sum P(3) = 2.1e-75
Identities = 75/90 (83%), Positives = 83/90 (92%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNSI 291
MAQILAPSTQWQMRI+K+SPNASP+TSNMWSSLL KQNKK TSSAKFRV+AIKS+N
Sbjct: 1 MAQILAPSTQWQMRITKTSPNASPVTSNMWSSLLMKQNKKA--TSSAKFRVLAIKSENGT 58
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
INRLE LL+LDITP+TDKIIAEYIW+GGTG
Sbjct: 59 INRLENLLDLDITPYTDKIIAEYIWVGGTG 88
Score = 252 (88.7 bits), Expect = 2.1e-75, Sum P(3) = 2.1e-75
Identities = 46/50 (92%), Positives = 47/50 (94%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICD+YTP EPIPTNK HR
Sbjct: 118 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDAYTPAGEPIPTNKRHR 167
Score = 163 (57.4 bits), Expect = 2.1e-75, Sum P(3) = 2.1e-75
Identities = 29/33 (87%), Positives = 32/33 (96%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GIDVRSKSRTI++PVEHPSELPKWNYDGS
Sbjct: 84 VGGTGIDVRSKSRTIARPVEHPSELPKWNYDGS 116
>gi|121353|sp|P15102|GLN4_PHAVU GLUTAMINE SYNTHETASE LEAF ISOZYME, CHLOROPLAST
PRECURSOR (ISOZYME DELTA) (GLUTAMATE-AMMONIA LIGASE)
>gi|68596|pir||AJFBQD glutamate--ammonia ligase (EC 6.3.1.2) delta
precursor, chloroplast - kidney bean >gi|21005|emb|CAA31234.1|
(X12738) GS precursor protein [Phaseolus vulgaris]
Length = 429
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 429
0 150 300
__________________
Annotated Domains:
BLOCKS BL00180A: Glutamine synthetase proteins. 110..122
BLOCKS BL00180B: Glutamine synthetase proteins. 146..164
BLOCKS BL00180C: Glutamine synthetase proteins. 182..191
BLOCKS BL00180D: Glutamine synthetase proteins. 200..221
BLOCKS BL00180E: Glutamine synthetase proteins. 235..286
BLOCKS BL00180F: Glutamine synthetase proteins. 299..311
BLOCKS BL00180G: Glutamine synthetase proteins. 384..398
DOMO DM00510: GLUTAMATE--AMMONIALIGASE 59..429
PFAM gln-synt: Glutamine synthetase 74..401
PRODOM PD011408: 1..59
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 61..110
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 113..309
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 322..409
__________________
Plus Strand HSPs:
Score = 380 (133.8 bits), Expect = 4.4e-75, Sum P(3) = 4.4e-75
Identities = 77/90 (85%), Positives = 81/90 (90%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNSI 291
MAQILAPSTQWQMR +KSS +ASPITSN WSSLL KQNKK TSSAKFRV+A+KSD S
Sbjct: 1 MAQILAPSTQWQMRFTKSSRHASPITSNTWSSLLMKQNKK---TSSAKFRVLAVKSDGST 57
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
INRLEGLLNLDITPFTDKIIAEYIWIGGTG
Sbjct: 58 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 87
Score = 248 (87.3 bits), Expect = 4.4e-75, Sum P(3) = 4.4e-75
Identities = 45/50 (90%), Positives = 47/50 (94%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFRGGNNILVICD+YTP EPIPTNK HR
Sbjct: 117 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPAGEPIPTNKRHR 166
Score = 170 (59.8 bits), Expect = 4.4e-75, Sum P(3) = 4.4e-75
Identities = 31/33 (93%), Positives = 32/33 (96%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GIDVRSKSRTISKPVEHPSELPKWNYDGS
Sbjct: 83 IGGTGIDVRSKSRTISKPVEHPSELPKWNYDGS 115
>gi|226547|prf||1601519A Gln synthetase [Phaseolus vulgaris]
Length = 429
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 429
0 150 300
Plus Strand HSPs:
Score = 380 (133.8 bits), Expect = 4.4e-75, Sum P(3) = 4.4e-75
Identities = 77/90 (85%), Positives = 81/90 (90%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNSI 291
MAQILAPSTQWQMR +KSS +ASPITSN WSSLL KQNKK TSSAKFRV+A+KSD S
Sbjct: 1 MAQILAPSTQWQMRFTKSSRHASPITSNTWSSLLMKQNKK---TSSAKFRVLAVKSDGST 57
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
INRLEGLLNLDITPFTDKIIAEYIWIGGTG
Sbjct: 58 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 87
Score = 248 (87.3 bits), Expect = 4.4e-75, Sum P(3) = 4.4e-75
Identities = 45/50 (90%), Positives = 47/50 (94%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFRGGNNILVICD+YTP EPIPTNK HR
Sbjct: 117 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPAGEPIPTNKRHR 166
Score = 170 (59.8 bits), Expect = 4.4e-75, Sum P(3) = 4.4e-75
Identities = 31/33 (93%), Positives = 32/33 (96%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GIDVRSKSRTISKPVEHPSELPKWNYDGS
Sbjct: 83 IGGTGIDVRSKSRTISKPVEHPSELPKWNYDGS 115
>gi|121344|sp|P08281|GLN2_PEA GLUTAMINE SYNTHETASE LEAF ISOZYME, CHLOROPLAST
PRECURSOR (GLUTAMATE-AMMONIA LIGASE) (CHLOROPLAST GS2)
>gi|68597|pir||AJPMQ2 glutamate--ammonia ligase (EC 6.3.1.2) delta
precursor, chloroplast - garden pea >gi|169059|gb|AAA33653.1|
(M20664) glutamine synthetase (chloroplast GS2) (EC 6.3.1.2) [Pisum
sativum]
Length = 430
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 430
0 150 300
__________________
Annotated Domains:
DOMO DM00510: GLUTAMATE--AMMONIALIGASE 60..430
PFAM gln-synt: Glutamine synthetase 75..402
PRODOM PD011408: 1..61
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 63..111
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 114..310
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 323..410
__________________
Plus Strand HSPs:
Score = 352 (123.9 bits), Expect = 3.3e-71, Sum P(3) = 3.3e-71
Identities = 70/90 (77%), Positives = 78/90 (86%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNSI 291
MAQILAPSTQWQMRI+K+SP A+PITS MWSSL+ KQ KKV+ SAKFRVMA+ S+N
Sbjct: 1 MAQILAPSTQWQMRITKTSPCATPITSKMWSSLVMKQTKKVA--HSAKFRVMAVNSENGT 58
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
INR+E LLNLDITPFTD IIAEYIWIGGTG
Sbjct: 59 INRVEDLLNLDITPFTDSIIAEYIWIGGTG 88
Score = 247 (86.9 bits), Expect = 3.3e-71, Sum P(3) = 3.3e-71
Identities = 44/50 (88%), Positives = 47/50 (94%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFRGGNNILV+CD+YTP EPIPTNK HR
Sbjct: 118 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVVCDAYTPAGEPIPTNKRHR 167
Score = 162 (57.0 bits), Expect = 3.3e-71, Sum P(3) = 3.3e-71
Identities = 29/33 (87%), Positives = 31/33 (93%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GIDVRSKSRTISKPV HPSE+PKWNYDGS
Sbjct: 84 IGGTGIDVRSKSRTISKPVSHPSEVPKWNYDGS 116
>gi|5733730|gb|AAD49734.1|AF169795_1 (AF169795) glutamine synthetase precursor
[Juglans nigra]
Length = 432
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 432
0 150 300
Plus Strand HSPs:
Score = 343 (120.7 bits), Expect = 5.4e-71, Sum P(3) = 5.4e-71
Identities = 65/90 (72%), Positives = 77/90 (85%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNSI 291
MA IL P+T+WQMRI+K+S NASP+T+ MW SLL KQNKK S SSAKFRV A KS+NS
Sbjct: 1 MAHILTPTTRWQMRITKNSANASPMTAKMWGSLLLKQNKKGSSKSSAKFRVFATKSENST 60
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
+NR+E LLNLD+TP+TDKIIAEYIWIGG+G
Sbjct: 61 VNRIEKLLNLDLTPYTDKIIAEYIWIGGSG 90
Score = 248 (87.3 bits), Expect = 5.4e-71, Sum P(3) = 5.4e-71
Identities = 45/50 (90%), Positives = 47/50 (94%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFRGGNNILVICD+YTP EPIPTNK HR
Sbjct: 120 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHR 169
Score = 168 (59.1 bits), Expect = 5.4e-71, Sum P(3) = 5.4e-71
Identities = 30/33 (90%), Positives = 32/33 (96%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRTISKPVEHPSELPKWNYDGS
Sbjct: 86 IGGSGIDLRSKSRTISKPVEHPSELPKWNYDGS 118
>gi|8928128|sp|O22506|GLN2_DAUCA GLUTAMINE SYNTHETASE, CHLOROPLAST PRECURSOR
(GLUTAMATE--AMMONIA LIGASE) (GS2) >gi|7437918|pir||T14292
glutamate--ammonia ligase (EC 6.3.1.2) - carrot
>gi|2454633|gb|AAB71693.1| (AF019561) glutamine synthetase; GS2
[Daucus carota]
Length = 432
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 432
0 150 300
Plus Strand HSPs:
Score = 322 (113.3 bits), Expect = 9.8e-70, Sum P(3) = 9.8e-70
Identities = 60/90 (66%), Positives = 71/90 (78%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNSI 291
MAQILAPS QWQMR +K+S S +TS MW SL KQNKK SS K+R +A+KS++
Sbjct: 1 MAQILAPSVQWQMRFTKNSTEVSSMTSKMWGSLFLKQNKKAPARSSTKYRALAVKSEDGT 60
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
INR+E LLNLD+TP+TDKIIAEYIWIGGTG
Sbjct: 61 INRMEDLLNLDVTPYTDKIIAEYIWIGGTG 90
Score = 255 (89.8 bits), Expect = 9.8e-70, Sum P(3) = 9.8e-70
Identities = 46/50 (92%), Positives = 48/50 (96%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICD+YTPQ EPIPTNK H+
Sbjct: 120 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDTYTPQGEPIPTNKRHK 169
Score = 170 (59.8 bits), Expect = 9.8e-70, Sum P(3) = 9.8e-70
Identities = 31/33 (93%), Positives = 32/33 (96%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GIDVRSKSRTISKPVEHPSELPKWNYDGS
Sbjct: 86 IGGTGIDVRSKSRTISKPVEHPSELPKWNYDGS 118
>gi|4731322|gb|AAD28443.1|AF124244_1 (AF124244) glutamine synthetase precursor
[Medicago sativa]
Length = 428
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 428
0 150 300
Plus Strand HSPs:
Score = 311 (109.5 bits), Expect = 3.6e-68, Sum P(3) = 3.6e-68
Identities = 67/90 (74%), Positives = 74/90 (82%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNSI 291
MAQILAPS Q Q RI+K+SP A+PI+S MWSSL+ KQNKKV+ SAKFRVMAI S
Sbjct: 1 MAQILAPSIQCQTRITKTSPLATPISSKMWSSLVMKQNKKVA--RSAKFRVMAINSGT-- 56
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
INR+E LLNLDITPFTD IIAEYIWIGGTG
Sbjct: 57 INRVEDLLNLDITPFTDSIIAEYIWIGGTG 86
Score = 251 (88.4 bits), Expect = 3.6e-68, Sum P(3) = 3.6e-68
Identities = 45/50 (90%), Positives = 48/50 (96%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFRGGNNILVICD+YTPQ EPIPTNK H+
Sbjct: 116 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPQGEPIPTNKRHK 165
Score = 170 (59.8 bits), Expect = 3.6e-68, Sum P(3) = 3.6e-68
Identities = 31/33 (93%), Positives = 32/33 (96%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GIDVRSKSRTISKPVEHPSELPKWNYDGS
Sbjct: 82 IGGTGIDVRSKSRTISKPVEHPSELPKWNYDGS 114
>gi|5701896|emb|CAA47373.2| (X66940) glutamate--ammonia ligase [Nicotiana
sylvestris]
Length = 432
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 432
0 150 300
Plus Strand HSPs:
Score = 304 (107.0 bits), Expect = 6.5e-65, Sum P(3) = 6.5e-65
Identities = 57/90 (63%), Positives = 76/90 (84%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNSI 291
MAQILAPS +WQMR++KSS +A+P+TS MWSS++ K K+++ SSAKFR A++SD+
Sbjct: 1 MAQILAPSGEWQMRMTKSSTDANPLTSKMWSSVVLKIIKELAVKSSAKFRFFALESDSGT 60
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
+N+ E LLNLD+TP+TDKIIAEYIWIGG+G
Sbjct: 61 VNQSEQLLNLDVTPYTDKIIAEYIWIGGSG 90
Score = 241 (84.8 bits), Expect = 6.5e-65, Sum P(3) = 6.5e-65
Identities = 43/50 (86%), Positives = 47/50 (94%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFRGGNNILVICD+YTP EPIP+NK H+
Sbjct: 120 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPAGEPIPSNKRHK 169
Score = 156 (54.9 bits), Expect = 6.5e-65, Sum P(3) = 6.5e-65
Identities = 28/33 (84%), Positives = 31/33 (93%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRTISKPV+H SELPKWNYDGS
Sbjct: 86 IGGSGIDMRSKSRTISKPVKHASELPKWNYDGS 118
>gi|1084412|pir||S22527 glutamate--ammonia ligase (EC 6.3.1.2) - tobacco
Length = 432
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
Annotated Domains: ___________________________________________
__________________________________________________
Database sequence: | | | | 432
0 150 300
__________________
Annotated Domains:
DOMO DM00510: GLUTAMATE--AMMONIALIGASE 62..433
__________________
Plus Strand HSPs:
Score = 301 (106.0 bits), Expect = 3.9e-63, Sum P(3) = 3.9e-63
Identities = 57/90 (63%), Positives = 76/90 (84%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNSI 291
MAQILAPS +WQMR++KSS +A+P+TS MWSS++ K K+++ SSAKFRV A++SD+
Sbjct: 1 MAQILAPSGEWQMRMTKSSTDANPLTSKMWSSVVIKIIKELAVKSSAKFRVFALESDSGT 60
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
+N+ E LLNLD+TP+TD IIAEYIWIGG+G
Sbjct: 61 VNQSEQLLNLDVTPYTDLIIAEYIWIGGSG 90
Score = 227 (79.9 bits), Expect = 3.9e-63, Sum P(3) = 3.9e-63
Identities = 41/50 (82%), Positives = 45/50 (90%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFRGGNNILVICD+Y P EPIP+N H+
Sbjct: 120 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYWPAGEPIPSNLRHK 169
Score = 156 (54.9 bits), Expect = 3.9e-63, Sum P(3) = 3.9e-63
Identities = 28/33 (84%), Positives = 31/33 (93%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRTISKPV+H SELPKWNYDGS
Sbjct: 86 IGGSGIDMRSKSRTISKPVKHASELPKWNYDGS 118
>gi|4884970|gb|AAD31898.1|AF145480_1 (AF145480) glutamine synthetase leaf
isozyme precursor [Mesembryanthemum crystallinum]
Length = 433
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 433
0 150 300
Plus Strand HSPs:
Score = 268 (94.3 bits), Expect = 1.4e-61, Sum P(3) = 1.4e-61
Identities = 57/91 (62%), Positives = 70/91 (76%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMA-IKSDNS 288
MAQILAPS Q +M I+KSS AS + N W+S++ KQ++K S +S KF+V A IK D S
Sbjct: 1 MAQILAPSLQVKMSITKSSTPASSMLPNTWTSVVLKQSRKGSIKNSTKFKVCASIKPDVS 60
Query: 289 IINRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
+ NR+E LLNLD+TPFTDKIIAEYIWIGG G
Sbjct: 61 VQNRVEQLLNLDVTPFTDKIIAEYIWIGGAG 91
Score = 245 (86.2 bits), Expect = 1.4e-61, Sum P(3) = 1.4e-61
Identities = 44/50 (88%), Positives = 47/50 (94%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFRGGNNILVICD+YTP EPIPTNK H+
Sbjct: 121 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPAGEPIPTNKRHK 170
Score = 165 (58.1 bits), Expect = 1.4e-61, Sum P(3) = 1.4e-61
Identities = 29/33 (87%), Positives = 32/33 (96%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRT+SKPVEHPSELPKWNYDGS
Sbjct: 87 IGGAGIDLRSKSRTLSKPVEHPSELPKWNYDGS 119
>gi|1934754|emb|CAA73062.1| (Y12458) plastidic glutamine synthetase precursor
[Brassica napus]
Length = 428
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 428
0 150 300
Plus Strand HSPs:
Score = 250 (88.0 bits), Expect = 4.7e-57, Sum P(3) = 4.7e-57
Identities = 53/90 (58%), Positives = 67/90 (74%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNSI 291
MAQILA S QM+++K SP AS S +WSS++ KQ KK + + F+ MA++SDNS
Sbjct: 1 MAQILAASPTCQMKLTKPSPIAS---SKLWSSVMLKQ-KKQNSSKLRSFKAMALQSDNST 56
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
INR+E LLNLD PFTD+IIAEYIWIGG+G
Sbjct: 57 INRVESLLNLDTKPFTDRIIAEYIWIGGSG 86
Score = 235 (82.7 bits), Expect = 4.7e-57, Sum P(3) = 4.7e-57
Identities = 43/50 (86%), Positives = 46/50 (92%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIF+DPFRGGNNILVICD+YTP EPIPTNK R
Sbjct: 116 TGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTYTPAGEPIPTNKRAR 165
Score = 153 (53.9 bits), Expect = 4.7e-57, Sum P(3) = 4.7e-57
Identities = 27/33 (81%), Positives = 30/33 (90%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRT+ KPVE PSELPKWNYDGS
Sbjct: 82 IGGSGIDLRSKSRTLEKPVEDPSELPKWNYDGS 114
>gi|12643761|sp|Q42624|GLNC_BRANA GLUTAMINE SYNTHETASE, CHLOROPLAST PRECURSOR
(GLUTAMATE--AMMONIA LIGASE) (GS2) >gi|322646|pir||S32228
glutamate--ammonia ligase (EC 6.3.1.2) precursor - rape
>gi|629590|pir||S32686 glutamate--ammonia ligase (EC 6.3.1.2)
precursor - rape >gi|296223|emb|CAA51280.1| (X72751)
glutamate--ammonia ligase precursor [Brassica napus]
Length = 428
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 428
0 150 300
Plus Strand HSPs:
Score = 248 (87.3 bits), Expect = 8.1e-57, Sum P(3) = 8.1e-57
Identities = 54/90 (60%), Positives = 67/90 (74%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNSI 291
MAQILA S QMR++K S AS S +W+S++ KQ KK S + F+VMA++SDNS
Sbjct: 1 MAQILAASPTCQMRLTKPSSIAS---SKLWNSVVLKQ-KKQSSSKVRSFKVMALQSDNST 56
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
INR+E LLNLD PFTD+IIAEYIWIGG+G
Sbjct: 57 INRVESLLNLDTKPFTDRIIAEYIWIGGSG 86
Score = 235 (82.7 bits), Expect = 8.1e-57, Sum P(3) = 8.1e-57
Identities = 43/50 (86%), Positives = 46/50 (92%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIF+DPFRGGNNILVICD+YTP EPIPTNK R
Sbjct: 116 TGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTYTPAGEPIPTNKRAR 165
Score = 153 (53.9 bits), Expect = 8.1e-57, Sum P(3) = 8.1e-57
Identities = 27/33 (81%), Positives = 30/33 (90%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRT+ KPVE PSELPKWNYDGS
Sbjct: 82 IGGSGIDLRSKSRTLEKPVEDPSELPKWNYDGS 114
>gi|6966930|emb|CAB72423.1| (AJ271909) glutamine synthetase [Brassica napus]
Length = 428
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 428
0 150 300
Plus Strand HSPs:
Score = 245 (86.2 bits), Expect = 3.0e-56, Sum P(3) = 3.0e-56
Identities = 54/90 (60%), Positives = 66/90 (73%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNSI 291
MAQILA S QMR++K S AS S +W+S++ KQ KK S + F+VMAI+SDNS
Sbjct: 1 MAQILAASPTCQMRLTKPSSIAS---SKLWNSVVLKQ-KKQSSSKVRSFKVMAIQSDNST 56
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
INR+E LLNLD PFTD+IIAEYIW GG+G
Sbjct: 57 INRVESLLNLDTKPFTDRIIAEYIWYGGSG 86
Score = 235 (82.7 bits), Expect = 3.0e-56, Sum P(3) = 3.0e-56
Identities = 43/50 (86%), Positives = 46/50 (92%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIF+DPFRGGNNILVICD+YTP EPIPTNK R
Sbjct: 116 TGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTYTPAGEPIPTNKRAR 165
Score = 151 (53.2 bits), Expect = 3.0e-56, Sum P(3) = 3.0e-56
Identities = 27/32 (84%), Positives = 29/32 (90%), Frame = +2
Query: 371 GGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
GG GID+RSKSRT+ KPVE PSELPKWNYDGS
Sbjct: 83 GGSGIDLRSKSRTLEKPVEDPSELPKWNYDGS 114
>gi|11386828|sp|Q43127|GLN2_ARATH GLUTAMINE SYNTHETASE, CHLOROPLAST PRECURSOR
(GLUTAMATE--AMMONIA LIGASE) (GS2) >gi|99696|pir||S18600
glutamate--ammonia ligase (EC 6.3.1.2) precursor, chloroplast
(clone lambdaAtgsl1) - Arabidopsis thaliana
>gi|240070|gb|AAB20558.1| (S69727) light-regulated glutamine
synthetase isoenzyme [Arabidopsis thaliana, Peptide, 430 aa]
>gi|6681579|dbj|BAA88761.1| (AB015045) Glutamine Synthetase
[Arabidopsis thaliana] >gi|9758688|dbj|BAB09304.1| (AB013393)
glutamate-ammonia ligase (EC 6.3.1.2) precursor, chloroplast (clone
lambdaAtgsl1) [Arabidopsis thaliana] >gi|228453|prf||1804333A Gln
synthetase [Arabidopsis thaliana]
Length = 430
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 430
0 150 300
Plus Strand HSPs:
Score = 234 (82.4 bits), Expect = 1.4e-54, Sum P(3) = 1.4e-54
Identities = 53/90 (58%), Positives = 67/90 (74%), Frame = +1
Query: 112 MAQILAPSTQWQMRISK-SSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNS 288
MAQILA S QMR+ K SS AS +S +WSS++ KQ KK S FRV+A++SDNS
Sbjct: 1 MAQILAASPTCQMRVPKHSSVIAS--SSKLWSSVVLKQ-KKQSNNKVRGFRVLALQSDNS 57
Query: 289 IINRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
+NR+E LLNLD P++D+IIAEYIWIGG+G
Sbjct: 58 TVNRVETLLNLDTKPYSDRIIAEYIWIGGSG 88
Score = 228 (80.3 bits), Expect = 1.4e-54, Sum P(3) = 1.4e-54
Identities = 41/47 (87%), Positives = 45/47 (95%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNK 611
TGQAPG+DSEVILYPQAIF+DPFRGGNNILVICD++TP EPIPTNK
Sbjct: 118 TGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTWTPAGEPIPTNK 164
Score = 155 (54.6 bits), Expect = 1.4e-54, Sum P(3) = 1.4e-54
Identities = 28/33 (84%), Positives = 30/33 (90%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRTI KPVE PSELPKWNYDGS
Sbjct: 84 IGGSGIDLRSKSRTIEKPVEDPSELPKWNYDGS 116
>gi|121343|sp|P14655|GLN2_ORYSA GLUTAMINE SYNTHETASE SHOOT ISOZYME, CHLOROPLAST
PRECURSOR (GLUTAMATE--AMMONIA LIGASE) (CLONE LAMBDA-GS31)
>gi|68598|pir||AJRZQD glutamate--ammonia ligase (EC 6.3.1.2) delta
precursor, chloroplast - rice >gi|20370|emb|CAA32462.1| (X14246)
precursor chloroplastic glutamine synthetase (AA -46 to 382) [Oryza
sativa]
Length = 428
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): __________
Annotated Domains: _______________________________________________
__________________________________________________
Database sequence: | | | | 428
0 150 300
__________________
Annotated Domains:
BLOCKS BL00180A: Glutamine synthetase proteins. 109..121
BLOCKS BL00180B: Glutamine synthetase proteins. 145..163
BLOCKS BL00180C: Glutamine synthetase proteins. 181..190
BLOCKS BL00180D: Glutamine synthetase proteins. 199..220
BLOCKS BL00180E: Glutamine synthetase proteins. 234..285
BLOCKS BL00180F: Glutamine synthetase proteins. 298..310
BLOCKS BL00180G: Glutamine synthetase proteins. 383..397
DOMO DM00510: GLUTAMATE--AMMONIALIGASE 58..428
PFAM gln-synt: Glutamine synthetase 73..400
PRODOM PD116311: GLN2_ORYSA 32..58
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 60..109
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 112..308
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 321..408
__________________
Plus Strand HSPs:
Score = 238 (83.8 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 43/50 (86%), Positives = 47/50 (94%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFRGGNNILV+CD+YTP EPIPTNK +R
Sbjct: 116 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVMCDTYTPAGEPIPTNKRNR 165
Score = 180 (63.4 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 39/90 (43%), Positives = 57/90 (63%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNS- 288
MAQ + P+ Q Q+ ++ P A+ + +W + TS FRVMA+ ++ +
Sbjct: 1 MAQAVVPAMQCQVGAVRARPAAAAAAAG---GRVWGVRRTGRGTSG--FRVMAVSTETTG 55
Query: 289 IINRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
++ R+E LLN+D TPFTDKIIAEYIW+GGTG
Sbjct: 56 VVTRMEQLLNMDTTPFTDKIIAEYIWVGGTG 86
Score = 157 (55.3 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 29/33 (87%), Positives = 31/33 (93%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRTISKPVE PSELPKWNYDGS
Sbjct: 82 VGGTGIDLRSKSRTISKPVEDPSELPKWNYDGS 114
>gi|829285|emb|CAA29057.1| (X05514) gluthamine synthetase [Pisum sativum]
Length = 373
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 373
0 150 300
Plus Strand HSPs:
Score = 247 (86.9 bits), Expect = 3.6e-49, Sum P(3) = 3.6e-49
Identities = 44/50 (88%), Positives = 47/50 (94%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFRGGNNILV+CD+YTP EPIPTNK HR
Sbjct: 61 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVVCDAYTPAGEPIPTNKRHR 110
Score = 162 (57.0 bits), Expect = 3.6e-49, Sum P(3) = 3.6e-49
Identities = 29/33 (87%), Positives = 31/33 (93%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GIDVRSKSRTISKPV HPSE+PKWNYDGS
Sbjct: 27 IGGTGIDVRSKSRTISKPVSHPSEVPKWNYDGS 59
Score = 143 (50.3 bits), Expect = 3.6e-49, Sum P(3) = 3.6e-49
Identities = 27/30 (90%), Positives = 28/30 (93%), Frame = +1
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
INR+E LLNLDITPFTD IIAEYIWIGGTG
Sbjct: 2 INRVEDLLNLDITPFTDSIIAEYIWIGGTG 31
>gi|121341|sp|P25462|GLNC_MAIZE GLUTAMINE SYNTHETASE, CHLOROPLAST PRECURSOR
(GLUTAMATE--AMMONIA LIGASE) (GS2) >gi|539063|pir||S39482
glutamate--ammonia ligase (EC 6.3.1.2) 1 precursor, chloroplast -
maize >gi|434334|emb|CAA46724.1| (X65931) glutamine synthetase [Zea
mays]
Length = 423
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): __________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 423
0 150 300
__________________
Annotated Domains:
BLOCKS BL00180A: Glutamine synthetase proteins. 104..116
BLOCKS BL00180B: Glutamine synthetase proteins. 140..158
BLOCKS BL00180C: Glutamine synthetase proteins. 176..185
BLOCKS BL00180D: Glutamine synthetase proteins. 194..215
BLOCKS BL00180E: Glutamine synthetase proteins. 229..280
BLOCKS BL00180F: Glutamine synthetase proteins. 293..305
BLOCKS BL00180G: Glutamine synthetase proteins. 378..392
DOMO DM00510: GLUTAMATE--AMMONIALIGASE 53..423
PFAM gln-synt: Glutamine synthetase 68..395
PRODOM PD116315: GLNC_MAIZE 1..53
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 55..104
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 107..303
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 317..403
__________________
Plus Strand HSPs:
Score = 251 (88.4 bits), Expect = 4.1e-49, Sum P(3) = 4.1e-49
Identities = 44/50 (88%), Positives = 48/50 (96%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFRGGNN+LVICD+YTPQ EP+PTNK HR
Sbjct: 111 TGQAPGEDSEVILYPQAIFKDPFRGGNNVLVICDTYTPQGEPLPTNKRHR 160
Score = 160 (56.3 bits), Expect = 4.1e-49, Sum P(3) = 4.1e-49
Identities = 29/33 (87%), Positives = 31/33 (93%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRTISKPVE PSELPKWNYDGS
Sbjct: 77 VGGSGIDIRSKSRTISKPVEDPSELPKWNYDGS 109
Score = 150 (52.8 bits), Expect = 4.1e-49, Sum P(3) = 4.1e-49
Identities = 33/90 (36%), Positives = 57/90 (63%), Frame = +1
Query: 112 MAQILAPSTQWQMRISKSSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNS- 288
MAQ + P+ Q ++ + ++ +WS+ + + +S F+VMA+ + ++
Sbjct: 1 MAQAVVPAMQCRVGVKAAA-------GRVWSA---GRTRTGRGGASPGFKVMAVSTGSTG 50
Query: 289 IINRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
++ RLE LLN+D TP+TDK+IAEYIW+GG+G
Sbjct: 51 VVPRLEQLLNMDTTPYTDKVIAEYIWVGGSG 81
>gi|228454|prf||1804333B Gln synthetase [Arabidopsis thaliana]
Length = 430
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 430
0 150 300
Plus Strand HSPs:
Score = 232 (81.7 bits), Expect = 2.3e-48, Sum P(3) = 2.3e-48
Identities = 42/49 (85%), Positives = 45/49 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFR GNNILV+CD+YTP EPIPTNK H
Sbjct: 118 TGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 166
Score = 197 (69.3 bits), Expect = 2.3e-48, Sum P(3) = 2.3e-48
Identities = 48/90 (53%), Positives = 62/90 (68%), Frame = +1
Query: 112 MAQILAPSTQWQMRISK-SSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNS 288
MAQILA S QMR+ K SS AS +S +WSS++ KQ KK S FRV+A++SDN
Sbjct: 1 MAQILAASPTCQMRVPKHSSVIAS--SSKLWSSVVLKQ-KKQSNNKVRGFRVLALQSDNM 57
Query: 289 IINRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
+N E LLNL + + D+IIAEYIW+GG+G
Sbjct: 58 SLNSDEILLNLSDSTYKDRIIAEYIWVGGSG 88
Score = 129 (45.4 bits), Expect = 2.3e-48, Sum P(3) = 2.3e-48
Identities = 22/33 (66%), Positives = 28/33 (84%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG G+D+RSK+RT+ PV PS+LPKWNYDGS
Sbjct: 84 VGGSGMDMRSKARTLPGPVTDPSQLPKWNYDGS 116
>gi|100878|pir||S16277 glutamate--ammonia ligase (EC 6.3.1.2) - maize
Length = 382
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | 382
0 150 300
Plus Strand HSPs:
Score = 251 (88.4 bits), Expect = 3.1e-48, Sum P(3) = 3.1e-48
Identities = 44/50 (88%), Positives = 48/50 (96%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFRGGNN+LVICD+YTPQ EP+PTNK HR
Sbjct: 70 TGQAPGEDSEVILYPQAIFKDPFRGGNNVLVICDTYTPQGEPLPTNKRHR 119
Score = 160 (56.3 bits), Expect = 3.1e-48, Sum P(3) = 3.1e-48
Identities = 29/33 (87%), Positives = 31/33 (93%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRTISKPVE PSELPKWNYDGS
Sbjct: 36 VGGSGIDIRSKSRTISKPVEDPSELPKWNYDGS 68
Score = 133 (46.8 bits), Expect = 3.1e-48, Sum P(3) = 3.1e-48
Identities = 23/40 (57%), Positives = 34/40 (85%), Frame = +1
Query: 265 MAIKSDNS-IINRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
MA+ + ++ ++ RLE LLN+D TP+TDK+IAEYIW+GG+G
Sbjct: 1 MAVSTGSTGVVPRLEQLLNMDTTPYTDKVIAEYIWVGGSG 40
>gi|755762|emb|CAA34131.1| (X16000) precursor (AA -47 to 380) (1 is 2nd base in
codon) [Hordeum vulgare]
Length = 426
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 426
0 150 300
Plus Strand HSPs:
Score = 249 (87.7 bits), Expect = 1.1e-47, Sum P(3) = 1.1e-47
Identities = 45/49 (91%), Positives = 47/49 (95%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFRGGNNILVICD+YTPQ EPIPTNK H
Sbjct: 114 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPQGEPIPTNKRH 162
Score = 158 (55.6 bits), Expect = 1.1e-47, Sum P(3) = 1.1e-47
Identities = 29/33 (87%), Positives = 31/33 (93%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRTISKPVE PSELPKWNYDGS
Sbjct: 80 VGGSGIDLRSKSRTISKPVEDPSELPKWNYDGS 112
Score = 141 (49.6 bits), Expect = 1.1e-47, Sum P(3) = 1.1e-47
Identities = 27/57 (47%), Positives = 41/57 (71%), Frame = +1
Query: 211 LWKQNKKVSPTSSAKFRVMAIKSDNS-IINRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
+W + TS F+V+A+ + + +I R++ LL++D TPFTDKIIAEYIW+GG+G
Sbjct: 29 VWGVRRAARATSG--FKVLALGPETTGVIQRMQQLLDMDTTPFTDKIIAEYIWVGGSG 84
>gi|121340|sp|P13564|GLN2_HORVU GLUTAMINE SYNTHETASE LEAF ISOZYME PRECURSOR
(GLUTAMATE--AMMONIA LIGASE) (CHLOROPLAST GS2)
>gi|18988|emb|CAA37643.1| (X53580) glutamine synthetase 2 precursor
[Hordeum vulgare]
Length = 434
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): _______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 434
0 150 300
__________________
Annotated Domains:
BLOCKS BL00180A: Glutamine synthetase proteins. 115..127
BLOCKS BL00180B: Glutamine synthetase proteins. 151..169
BLOCKS BL00180C: Glutamine synthetase proteins. 187..196
BLOCKS BL00180D: Glutamine synthetase proteins. 205..226
BLOCKS BL00180E: Glutamine synthetase proteins. 240..291
BLOCKS BL00180F: Glutamine synthetase proteins. 304..316
BLOCKS BL00180G: Glutamine synthetase proteins. 389..403
DOMO DM00510: GLUTAMATE--AMMONIALIGASE 64..434
PFAM gln-synt: Glutamine synthetase 79..406
PRODOM PD116317: GLN2_HORVU 1..64
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 66..115
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 118..314
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 327..414
__________________
Plus Strand HSPs:
Score = 249 (87.7 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 45/49 (91%), Positives = 47/49 (95%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFRGGNNILVICD+YTPQ EPIPTNK H
Sbjct: 122 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPQGEPIPTNKRH 170
Score = 158 (55.6 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 29/33 (87%), Positives = 31/33 (93%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRTISKPVE PSELPKWNYDGS
Sbjct: 88 VGGSGIDLRSKSRTISKPVEDPSELPKWNYDGS 120
Score = 142 (50.0 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 27/57 (47%), Positives = 42/57 (73%), Frame = +1
Query: 211 LWKQNKKVSPTSSAKFRVMAIKSDNS-IINRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
+W ++ TS F+V+A+ + + +I R++ LL++D TPFTDKIIAEYIW+GG+G
Sbjct: 37 VWGVSRAARATSG--FKVLALGPETTGVIQRMQQLLDMDTTPFTDKIIAEYIWVGGSG 92
>gi|68599|pir||AJBHQ glutamate--ammonia ligase (EC 6.3.1.2) 2 precursor,
chloroplast - barley
Length = 434
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): _______
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | 434
0 150 300
__________________
Annotated Domains:
Entrez domain: transit peptide (chloroplast) 1..53
__________________
Plus Strand HSPs:
Score = 249 (87.7 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 45/49 (91%), Positives = 47/49 (95%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFRGGNNILVICD+YTPQ EPIPTNK H
Sbjct: 122 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPQGEPIPTNKRH 170
Score = 158 (55.6 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 29/33 (87%), Positives = 31/33 (93%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSKSRTISKPVE PSELPKWNYDGS
Sbjct: 88 VGGSGIDLRSKSRTISKPVEDPSELPKWNYDGS 120
Score = 142 (50.0 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 27/57 (47%), Positives = 42/57 (73%), Frame = +1
Query: 211 LWKQNKKVSPTSSAKFRVMAIKSDNS-IINRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
+W ++ TS F+V+A+ + + +I R++ LL++D TPFTDKIIAEYIW+GG+G
Sbjct: 37 VWGVSRAARATSG--FKVLALGPETTGVIQRMQQLLDMDTTPFTDKIIAEYIWVGGSG 92
>gi|228455|prf||1804333C Gln synthetase [Arabidopsis thaliana]
Length = 430
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 430
0 150 300
Plus Strand HSPs:
Score = 230 (81.0 bits), Expect = 4.4e-47, Sum P(3) = 4.4e-47
Identities = 42/49 (85%), Positives = 44/49 (89%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG DSEVILYPQAIFKDPFR GNNILV+CD+YTP EPIPTNK H
Sbjct: 118 TGQAPGQDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 166
Score = 188 (66.2 bits), Expect = 4.4e-47, Sum P(3) = 4.4e-47
Identities = 47/90 (52%), Positives = 60/90 (66%), Frame = +1
Query: 112 MAQILAPSTQWQMRISK-SSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNS 288
MAQILA S QMR+ K SS AS +S +WSS++ KQ KK S FRV+A++SDN
Sbjct: 1 MAQILAASPTCQMRVPKHSSVIAS--SSKLWSSVVLKQ-KKQSNNKVRGFRVLALQSDNM 57
Query: 289 IINRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
+ E LLN+ P D+IIAEYIW+GG+G
Sbjct: 58 SLLADEVLLNISDNPEKDRIIAEYIWVGGSG 88
Score = 128 (45.1 bits), Expect = 4.4e-47, Sum P(3) = 4.4e-47
Identities = 22/33 (66%), Positives = 28/33 (84%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG G+D+RSK+RT+ PV PS+LPKWNYDGS
Sbjct: 84 VGGSGMDMRSKARTLPGPVTDPSKLPKWNYDGS 116
>gi|228456|prf||1804333D Gln synthetase [Arabidopsis thaliana]
Length = 430
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): ______
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 430
0 150 300
Plus Strand HSPs:
Score = 221 (77.8 bits), Expect = 1.9e-46, Sum P(3) = 1.9e-46
Identities = 40/49 (81%), Positives = 44/49 (89%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQA G+DSEVILYPQAIFKDPFR GNNILV+CD+YTP +PIPTNK H
Sbjct: 118 TGQAAGEDSEVILYPQAIFKDPFRKGNNILVMCDAYTPAGDPIPTNKRH 166
Score = 188 (66.2 bits), Expect = 1.9e-46, Sum P(3) = 1.9e-46
Identities = 49/90 (54%), Positives = 60/90 (66%), Frame = +1
Query: 112 MAQILAPSTQWQMRISK-SSPNASPITSNMWSSLLWKQNKKVSPTSSAKFRVMAIKSDNS 288
MAQILA S QMR+ K SS AS +S +WSS++ KQ KK S FRV+A++SDNS
Sbjct: 1 MAQILAASPTCQMRVPKHSSVIAS--SSKLWSSVVLKQ-KKQSNNKVRGFRVLALQSDNS 57
Query: 289 IINRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
+ E LLNL D+IIAEYIWIGG+G
Sbjct: 58 TLLSDEVLLNLTDATGKDRIIAEYIWIGGSG 88
Score = 132 (46.5 bits), Expect = 1.9e-46, Sum P(3) = 1.9e-46
Identities = 23/40 (57%), Positives = 29/40 (72%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGSXHWTGTG 487
+GG G+D+RSK+RT+ PV PS+LPKWNYDGS G
Sbjct: 84 IGGSGMDIRSKARTLPGPVTDPSKLPKWNYDGSSTGQAAG 123
>gi|1934758|emb|CAA73064.1| (Y12460) cytosolic glutamine synthetase [Brassica
napus]
Length = 349
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): ______
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 349
0 150 300
Plus Strand HSPs:
Score = 240 (84.5 bits), Expect = 6.0e-40, Sum P(3) = 6.0e-40
Identities = 43/49 (87%), Positives = 46/49 (93%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFRGGNNILV+CD+YTP EPIPTNK H
Sbjct: 53 TGQAPGEDSEVILYPQAIFKDPFRGGNNILVMCDAYTPAGEPIPTNKRH 101
Score = 133 (46.8 bits), Expect = 6.0e-40, Sum P(3) = 6.0e-40
Identities = 23/33 (69%), Positives = 28/33 (84%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG G+D+RSK+RT+ PV PSELPKWNYDGS
Sbjct: 19 VGGSGMDMRSKARTLPGPVSDPSELPKWNYDGS 51
Score = 89 (31.3 bits), Expect = 6.0e-40, Sum P(3) = 6.0e-40
Identities = 15/23 (65%), Positives = 21/23 (91%), Frame = +1
Query: 313 LNLDITPFTDKIIAEYIWIGGTG 381
+NL+++ TDKIIAEYIW+GG+G
Sbjct: 1 VNLNLSETTDKIIAEYIWVGGSG 23
>gi|1169926|sp|P38563|GLN5_MAIZE GLUTAMINE SYNTHETASE ROOT ISOZYME 5
(GLUTAMATE--AMMONIA LIGASE) (GS117)
Length = 357
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 357
0 150 300
__________________
Annotated Domains:
BLOCKS BL00180A: Glutamine synthetase proteins. 53..65
BLOCKS BL00180B: Glutamine synthetase proteins. 89..107
BLOCKS BL00180C: Glutamine synthetase proteins. 125..134
BLOCKS BL00180D: Glutamine synthetase proteins. 143..164
BLOCKS BL00180E: Glutamine synthetase proteins. 178..229
BLOCKS BL00180F: Glutamine synthetase proteins. 242..254
BLOCKS BL00180G: Glutamine synthetase proteins. 327..341
PFAM gln-synt: Glutamine synthetase 17..344
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 1..53
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 56..252
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 265..352
__________________
Plus Strand HSPs:
Score = 228 (80.3 bits), Expect = 2.1e-39, Sum P(3) = 2.1e-39
Identities = 41/50 (82%), Positives = 46/50 (92%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFR GNNILV+CD YTPQ EPIP+NK ++
Sbjct: 60 TGQAPGEDSEVILYPQAIFKDPFRKGNNILVMCDCYTPQGEPIPSNKRYK 109
Score = 133 (46.8 bits), Expect = 2.1e-39, Sum P(3) = 2.1e-39
Identities = 22/33 (66%), Positives = 28/33 (84%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSK+RT+ P+ PS+LPKWNYDGS
Sbjct: 26 VGGSGIDLRSKARTVKGPITDPSQLPKWNYDGS 58
Score = 100 (35.2 bits), Expect = 2.1e-39, Sum P(3) = 2.1e-39
Identities = 18/27 (66%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NLD++ TDKIIAEYIW+GG+G
Sbjct: 4 LTDLVNLDLSDCTDKIIAEYIWVGGSG 30
>gi|699623|dbj|BAA03433.1| (D14579) glutamine synthetase [Zea mays]
Length = 357
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 357
0 150 300
Plus Strand HSPs:
Score = 225 (79.2 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 41/49 (83%), Positives = 45/49 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFR GN+ILV+CD YTPQ EPIPTNK +
Sbjct: 60 TGQAPGEDSEVILYPQAIFKDPFRKGNHILVMCDCYTPQGEPIPTNKRY 108
Score = 133 (46.8 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 22/33 (66%), Positives = 28/33 (84%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSK+RT+ P+ PS+LPKWNYDGS
Sbjct: 26 IGGTGIDLRSKARTVKGPITDPSQLPKWNYDGS 58
Score = 102 (35.9 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 19/27 (70%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NLD++ TD+IIAEYIWIGGTG
Sbjct: 4 LTDLVNLDLSDCTDRIIAEYIWIGGTG 30
>gi|699621|dbj|BAA03432.1| (D14578) glutamine synthetase [Zea mays]
Length = 357
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 357
0 150 300
Plus Strand HSPs:
Score = 228 (80.3 bits), Expect = 4.3e-39, Sum P(3) = 4.3e-39
Identities = 41/50 (82%), Positives = 46/50 (92%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXHR 620
TGQAPG+DSEVILYPQAIFKDPFR GNNILV+CD YTPQ EPIP+NK ++
Sbjct: 60 TGQAPGEDSEVILYPQAIFKDPFRKGNNILVMCDCYTPQGEPIPSNKRYK 109
Score = 133 (46.8 bits), Expect = 4.3e-39, Sum P(3) = 4.3e-39
Identities = 22/33 (66%), Positives = 28/33 (84%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSK+RT+ P+ PS+LPKWNYDGS
Sbjct: 26 VGGSGIDLRSKARTVKGPITDPSQLPKWNYDGS 58
Score = 97 (34.1 bits), Expect = 4.3e-39, Sum P(3) = 4.3e-39
Identities = 17/27 (62%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NLD++ TD+IIAEYIW+GG+G
Sbjct: 4 LTDLVNLDLSDCTDRIIAEYIWVGGSG 30
>gi|68589|pir||AJLCQB glutamate--ammonia ligase (EC 6.3.1.2) beta, cytosolic -
garden lettuce
Length = 358
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 358
0 150 300
Plus Strand HSPs:
Score = 215 (75.7 bits), Expect = 9.2e-39, Sum P(3) = 9.2e-39
Identities = 38/47 (80%), Positives = 44/47 (93%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNK 611
TGQAPG+DSEVI+YPQAIFKDPF+ GN+ILV+CD+YTP EPIPTNK
Sbjct: 60 TGQAPGEDSEVIIYPQAIFKDPFKRGNHILVMCDAYTPAGEPIPTNK 106
Score = 145 (51.0 bits), Expect = 9.2e-39, Sum P(3) = 9.2e-39
Identities = 25/33 (75%), Positives = 30/33 (90%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG G+D+RSK+RTIS+PV PSELPKWNYDGS
Sbjct: 26 IGGSGMDLRSKARTISRPVSDPSELPKWNYDGS 58
Score = 99 (34.8 bits), Expect = 9.2e-39, Sum P(3) = 9.2e-39
Identities = 18/27 (66%), Positives = 22/27 (81%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NLD++ DKIIAEYIWIGG+G
Sbjct: 4 LSDLVNLDLSSINDKIIAEYIWIGGSG 30
>gi|585201|sp|P38559|GLN1_MAIZE GLUTAMINE SYNTHETASE ROOT ISOZYME 1
(GLUTAMATE--AMMONIA LIGASE) (GS122) >gi|481806|pir||S39477
glutamate--ammonia ligase (EC 6.3.1.2) 1-1, cytosolic - maize
>gi|434324|emb|CAA46719.1| (X65926) glutamine synthetase [Zea mays]
Length = 357
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 357
0 150 300
__________________
Annotated Domains:
BLOCKS BL00180A: Glutamine synthetase proteins. 53..65
BLOCKS BL00180B: Glutamine synthetase proteins. 89..107
BLOCKS BL00180C: Glutamine synthetase proteins. 125..134
BLOCKS BL00180D: Glutamine synthetase proteins. 143..164
BLOCKS BL00180E: Glutamine synthetase proteins. 178..229
BLOCKS BL00180F: Glutamine synthetase proteins. 242..254
BLOCKS BL00180G: Glutamine synthetase proteins. 327..341
DOMO DM00510: GLUTAMATE--AMMONIALIGASE 16..357
PFAM gln-synt: Glutamine synthetase 17..344
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 1..53
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 56..252
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 265..352
__________________
Plus Strand HSPs:
Score = 225 (79.2 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 41/49 (83%), Positives = 45/49 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFR GN+ILV+CD YTPQ EPIPTNK +
Sbjct: 60 TGQAPGEDSEVILYPQAIFKDPFRKGNHILVMCDCYTPQGEPIPTNKRY 108
Score = 127 (44.7 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 21/33 (63%), Positives = 27/33 (81%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSK+RT+ P+ P +LPKWNYDGS
Sbjct: 26 IGGTGIDLRSKARTVKGPITDPIQLPKWNYDGS 58
Score = 102 (35.9 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 19/27 (70%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NLD++ TD+IIAEYIWIGGTG
Sbjct: 4 LTDLVNLDLSDCTDRIIAEYIWIGGTG 30
>gi|12322616|gb|AAG51310.1|AC026480_17 (AC026480) glutamine synthetase,
putative [Arabidopsis thaliana]
Length = 356
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): ______
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 356
0 150 300
Plus Strand HSPs:
Score = 230 (81.0 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 42/49 (85%), Positives = 44/49 (89%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG DSEVILYPQAIFKDPFR GNNILV+CD+YTP EPIPTNK H
Sbjct: 60 TGQAPGQDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 108
Score = 128 (45.1 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 22/33 (66%), Positives = 28/33 (84%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG G+D+RSK+RT+ PV PS+LPKWNYDGS
Sbjct: 26 VGGSGMDMRSKARTLPGPVTDPSKLPKWNYDGS 58
Score = 93 (32.7 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 17/27 (62%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NLDI+ ++KIIAEYIW+GG+G
Sbjct: 4 LADLVNLDISDNSEKIIAEYIWVGGSG 30
>gi|99699|pir||S18601 glutamate--ammonia ligase (EC 6.3.1.2), cytosolic (clone
lambdaAtgsr1) - Arabidopsis thaliana
Length = 374
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 374
0 150 300
Plus Strand HSPs:
Score = 232 (81.7 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 42/49 (85%), Positives = 45/49 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFR GNNILV+CD+YTP EPIPTNK H
Sbjct: 62 TGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 110
Score = 129 (45.4 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 22/33 (66%), Positives = 28/33 (84%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG G+D+RSK+RT+ PV PS+LPKWNYDGS
Sbjct: 28 VGGSGMDMRSKARTLPGPVTDPSQLPKWNYDGS 60
Score = 90 (31.7 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 17/30 (56%), Positives = 23/30 (76%), Frame = +1
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
+N E LLNL + + D+IIAEYIW+GG+G
Sbjct: 3 LNSDEILLNLSDSTYKDRIIAEYIWVGGSG 32
>gi|121332|sp|P14654|GLN1_ORYSA GLUTAMINE SYNTHETASE ROOT ISOZYME
(GLUTAMATE--AMMONIA LIGASE) (CLONE LAMBDA-GS8)
>gi|68590|pir||AJRZQB glutamate--ammonia ligase (EC 6.3.1.2) beta,
cytosolic - rice >gi|20358|emb|CAA32460.1| (X14244) cytosolic
glutamine syntethase (AA 1-357) [Oryza sativa]
Length = 357
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 357
0 150 300
__________________
Annotated Domains:
BLOCKS BL00180A: Glutamine synthetase proteins. 53..65
BLOCKS BL00180B: Glutamine synthetase proteins. 89..107
BLOCKS BL00180C: Glutamine synthetase proteins. 125..134
BLOCKS BL00180D: Glutamine synthetase proteins. 143..164
BLOCKS BL00180E: Glutamine synthetase proteins. 178..229
BLOCKS BL00180F: Glutamine synthetase proteins. 242..254
BLOCKS BL00180G: Glutamine synthetase proteins. 327..341
PFAM gln-synt: Glutamine synthetase 17..344
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 1..53
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 56..252
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 265..352
__________________
Plus Strand HSPs:
Score = 231 (81.3 bits), Expect = 5.9e-38, Sum P(3) = 5.9e-38
Identities = 42/49 (85%), Positives = 45/49 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFR G+NILV+CD YTPQ EPIPTNK H
Sbjct: 60 TGQAPGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGEPIPTNKRH 108
Score = 124 (43.7 bits), Expect = 5.9e-38, Sum P(3) = 5.9e-38
Identities = 21/33 (63%), Positives = 27/33 (81%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG GID+RSK+RT+ P+ S+LPKWNYDGS
Sbjct: 26 VGGSGIDLRSKARTVKGPITDVSQLPKWNYDGS 58
Score = 91 (32.0 bits), Expect = 5.9e-38, Sum P(3) = 5.9e-38
Identities = 16/27 (59%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NL+++ +DKIIAEYIW+GG+G
Sbjct: 4 LTDLVNLNLSDCSDKIIAEYIWVGGSG 30
>gi|4884972|gb|AAD31899.1|AF145481_1 (AF145481) cytosolic glutamine synthetase
[Mesembryanthemum crystallinum]
Length = 349
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): ______
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 349
0 150 300
Plus Strand HSPs:
Score = 227 (79.9 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 41/49 (83%), Positives = 45/49 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG DSEVILYPQAIF+DPFR GNNILV+CD+YTPQ EPIPTNK +
Sbjct: 53 TGQAPGQDSEVILYPQAIFRDPFRRGNNILVMCDAYTPQGEPIPTNKRY 101
Score = 130 (45.8 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 21/33 (63%), Positives = 29/33 (87%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG G+D+RSK+RT++ PV+ P +LPKWNYDGS
Sbjct: 19 IGGSGMDMRSKARTLNGPVDDPKKLPKWNYDGS 51
Score = 84 (29.6 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 15/22 (68%), Positives = 20/22 (90%), Frame = +1
Query: 316 NLDITPFTDKIIAEYIWIGGTG 381
NL+I+ ++KIIAEYIWIGG+G
Sbjct: 2 NLNISEVSEKIIAEYIWIGGSG 23
>gi|99697|pir||S18602 glutamate--ammonia ligase (EC 6.3.1.2), cytosolic (clone
lambdaAtgsr2) - Arabidopsis thaliana
Length = 374
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 374
0 150 300
Plus Strand HSPs:
Score = 230 (81.0 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 42/49 (85%), Positives = 44/49 (89%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG DSEVILYPQAIFKDPFR GNNILV+CD+YTP EPIPTNK H
Sbjct: 62 TGQAPGQDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 110
Score = 128 (45.1 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 22/33 (66%), Positives = 28/33 (84%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG G+D+RSK+RT+ PV PS+LPKWNYDGS
Sbjct: 28 VGGSGMDMRSKARTLPGPVTDPSKLPKWNYDGS 60
Score = 87 (30.6 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 16/26 (61%), Positives = 20/26 (76%), Frame = +1
Query: 304 EGLLNLDITPFTDKIIAEYIWIGGTG 381
E LLN+ P D+IIAEYIW+GG+G
Sbjct: 7 EVLLNISDNPEKDRIIAEYIWVGGSG 32
>gi|99698|pir||S18603 glutamate--ammonia ligase (EC 6.3.1.2), cytosolic (clone
lambdaAtgskb6) - Arabidopsis thaliana
Length = 374
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): ______
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 374
0 150 300
Plus Strand HSPs:
Score = 221 (77.8 bits), Expect = 5.2e-36, Sum P(3) = 5.2e-36
Identities = 40/49 (81%), Positives = 44/49 (89%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQA G+DSEVILYPQAIFKDPFR GNNILV+CD+YTP +PIPTNK H
Sbjct: 62 TGQAAGEDSEVILYPQAIFKDPFRKGNNILVMCDAYTPAGDPIPTNKRH 110
Score = 132 (46.5 bits), Expect = 5.2e-36, Sum P(3) = 5.2e-36
Identities = 23/40 (57%), Positives = 29/40 (72%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGSXHWTGTG 487
+GG G+D+RSK+RT+ PV PS+LPKWNYDGS G
Sbjct: 28 IGGSGMDIRSKARTLPGPVTDPSKLPKWNYDGSSTGQAAG 67
Score = 81 (28.5 bits), Expect = 5.2e-36, Sum P(3) = 5.2e-36
Identities = 17/26 (65%), Positives = 19/26 (73%), Frame = +1
Query: 304 EGLLNLDITPFTDKIIAEYIWIGGTG 381
E LLNL D+IIAEYIWIGG+G
Sbjct: 7 EVLLNLTDATGKDRIIAEYIWIGGSG 32
>gi|8928127|sp|O22504|GLN1_DAUCA GLUTAMINE SYNTHETASE, CYTOSOLIC ISOZYME
(GLUTAMATE--AMMONIA LIGASE) (GS1) >gi|7437919|pir||T14290
glutamate--ammonia ligase (EC 6.3.1.2), cytosolic - carrot
>gi|2454629|gb|AAB71691.1| (AF019559) cytosolic glutamine
synthetase; GS1 [Daucus carota]
Length = 352
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 352
0 150 300
Plus Strand HSPs:
Score = 218 (76.7 bits), Expect = 5.6e-34, Sum P(3) = 5.6e-34
Identities = 39/47 (82%), Positives = 43/47 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNK 611
TGQ PGDDSEVI+YPQAIFKDPFR GN+ILV+CD+YTP EPIPTNK
Sbjct: 59 TGQGPGDDSEVIIYPQAIFKDPFRRGNHILVMCDTYTPAGEPIPTNK 105
Score = 109 (38.4 bits), Expect = 5.6e-34, Sum P(3) = 5.6e-34
Identities = 19/33 (57%), Positives = 26/33 (78%), Frame = +2
Query: 389 VRSKSRTISKPVEHPSELPKWNYDGSXHWTGTG 487
+RSK+RT+S PV+ P++LPKWN+DGS G G
Sbjct: 32 LRSKARTLSGPVDDPTKLPKWNFDGSSTGQGPG 64
Score = 84 (29.6 bits), Expect = 5.6e-34, Sum P(3) = 5.6e-34
Identities = 16/27 (59%), Positives = 19/27 (70%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NLD++ TDK IAEYIWI G
Sbjct: 4 LTDLINLDLSDTTDKFIAEYIWIDAVG 30
>gi|396547|emb|CAA52448.1| (X74429) glutamate--ammonia ligase [Pinus
sylvestris]
Length = 357
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): ______
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 357
0 150 300
Plus Strand HSPs:
Score = 182 (64.1 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 34/47 (72%), Positives = 39/47 (82%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNK 611
TGQA G DSEVILYPQAIF+DPFR G +ILVICD+Y+P IP+NK
Sbjct: 61 TGQAQGHDSEVILYPQAIFRDPFRRGKHILVICDAYSPNGTAIPSNK 107
Score = 122 (42.9 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 21/33 (63%), Positives = 27/33 (81%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG G+D+RSK+R++S PV ELPKWNYDGS
Sbjct: 27 IGGSGMDMRSKARSLSGPVSSVKELPKWNYDGS 59
Score = 100 (35.2 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 18/27 (66%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L LLNLD++ T+K+IAEYIWIGG+G
Sbjct: 5 LTDLLNLDLSDVTEKVIAEYIWIGGSG 31
>gi|1707963|sp|P52783|GLNA_PINSY GLUTAMINE SYNTHETASE CYTOSOLIC ISOZYME
(GLUTAMATE--AMMONIA LIGASE) (GS1) >gi|486832|pir||S36195
glutamate--ammonia ligase (EC 6.3.1.2), cytosolic - Scotch pine
>gi|404327|emb|CAA49476.1| (X69822) glutamate--ammonia ligase
[Pinus sylvestris]
Length = 357
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): ______
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 357
0 150 300
__________________
Annotated Domains:
BLOCKS BL00180A: Glutamine synthetase proteins. 54..66
BLOCKS BL00180B: Glutamine synthetase proteins. 90..108
BLOCKS BL00180C: Glutamine synthetase proteins. 126..135
BLOCKS BL00180D: Glutamine synthetase proteins. 144..165
BLOCKS BL00180E: Glutamine synthetase proteins. 179..230
BLOCKS BL00180F: Glutamine synthetase proteins. 243..255
BLOCKS BL00180G: Glutamine synthetase proteins. 328..342
PFAM gln-synt: Glutamine synthetase 18..345
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 1..54
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 57..253
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 266..353
__________________
Plus Strand HSPs:
Score = 182 (64.1 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 34/47 (72%), Positives = 39/47 (82%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNK 611
TGQA G DSEVILYPQAIF+DPFR G +ILVICD+Y+P IP+NK
Sbjct: 61 TGQAQGHDSEVILYPQAIFRDPFRRGKHILVICDAYSPNGTAIPSNK 107
Score = 122 (42.9 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 21/33 (63%), Positives = 27/33 (81%), Frame = +2
Query: 368 LGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
+GG G+D+RSK+R++S PV ELPKWNYDGS
Sbjct: 27 IGGSGMDMRSKARSLSGPVSSVKELPKWNYDGS 59
Score = 100 (35.2 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 18/27 (66%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L LLNLD++ T+K+IAEYIWIGG+G
Sbjct: 5 LTDLLNLDLSDVTEKVIAEYIWIGGSG 31
>gi|121334|sp|P04770|GLN1_PHAVU GLUTAMINE SYNTHETASE PR-1 (ISOZYME BETA)
(GLUTAMATE--AMMONIA LIGASE) >gi|68587|pir||AJFBQB
glutamate--ammonia ligase (EC 6.3.1.2) beta, cytosolic - kidney
bean >gi|21011|emb|CAA27631.1| (X04001) glutamine synthetase
subunit (aa 1-356) [Phaseolus vulgaris] >gi|225067|prf||1208270A
synthetase R1,Gln [Phaseolus vulgaris]
Length = 356
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _________
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 356
0 150 300
__________________
Annotated Domains:
BLOCKS BL00180A: Glutamine synthetase proteins. 53..65
BLOCKS BL00180B: Glutamine synthetase proteins. 89..107
BLOCKS BL00180C: Glutamine synthetase proteins. 125..134
BLOCKS BL00180D: Glutamine synthetase proteins. 143..164
BLOCKS BL00180E: Glutamine synthetase proteins. 178..229
BLOCKS BL00180F: Glutamine synthetase proteins. 242..254
BLOCKS BL00180G: Glutamine synthetase proteins. 327..341
PFAM gln-synt: Glutamine synthetase 17..344
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 1..53
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 56..252
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 266..352
__________________
Plus Strand HSPs:
Score = 231 (81.3 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 42/49 (85%), Positives = 44/49 (89%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG DSEVI+YPQAIFKDPFR GNNILVICD+YTP EPIPTNK H
Sbjct: 60 TGQAPGQDSEVIIYPQAIFKDPFRRGNNILVICDAYTPAGEPIPTNKRH 108
Score = 143 (50.3 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 27/52 (51%), Positives = 40/52 (76%), Frame = +2
Query: 314 LIWISLHSRTR*LLSTF-GLGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
LI ++L T +++ + +GG G+D+RSK+RT+ PV++PSELPKWNYDGS
Sbjct: 7 LINLNLSDTTEKVIAEYIWIGGSGLDLRSKARTLPGPVKNPSELPKWNYDGS 58
Score = 93 (32.7 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 16/27 (59%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NL+++ T+K+IAEYIWIGG+G
Sbjct: 4 LSDLINLNLSDTTEKVIAEYIWIGGSG 30
>gi|7437925|pir||T03255 glutamate--ammonia ligase (EC 6.3.1.2) 1-5, cytosolic -
common tobacco >gi|1419094|emb|CAA65173.1| (X95932) glutamine
synthetase [Nicotiana tabacum]
Length = 356
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _________
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 356
0 150 300
Plus Strand HSPs:
Score = 227 (79.9 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 42/49 (85%), Positives = 43/49 (87%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSE ILYPQAIFKDPFR GNNILVICD YTP EPIPTNK H
Sbjct: 60 TGQAPGEDSEEILYPQAIFKDPFRRGNNILVICDCYTPAGEPIPTNKRH 108
Score = 146 (51.4 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 27/52 (51%), Positives = 41/52 (78%), Frame = +2
Query: 314 LIWISLHSRTR*LLSTF-GLGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
L+ ++L T+ +++ + +GG G+DVRSK+RT+S PV+ PS+LPKWNYDGS
Sbjct: 7 LVNLNLSDSTQKIIAEYIWIGGSGMDVRSKARTLSGPVDDPSKLPKWNYDGS 58
Score = 91 (32.0 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 17/27 (62%), Positives = 22/27 (81%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NL+++ T KIIAEYIWIGG+G
Sbjct: 4 LSDLVNLNLSDSTQKIIAEYIWIGGSG 30
>gi|2213877|gb|AAB61597.1| (AF003197) glutamine synthetase [Hevea brasiliensis]
Length = 356
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _________
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 356
0 150 300
Plus Strand HSPs:
Score = 232 (81.7 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 42/49 (85%), Positives = 45/49 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFR GNNILV+CD+YTP EPIPTNK H
Sbjct: 60 TGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 108
Score = 139 (48.9 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 27/52 (51%), Positives = 39/52 (75%), Frame = +2
Query: 314 LIWISLHSRTR*LLSTF-GLGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
LI ++L T +++ + +GG G+D+RSK+RT+S PV PS+LPKWNYDGS
Sbjct: 7 LINLNLSDTTDKIIAEYIWIGGSGMDMRSKARTLSGPVSDPSKLPKWNYDGS 58
Score = 98 (34.5 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 18/27 (66%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NL+++ TDKIIAEYIWIGG+G
Sbjct: 4 LSDLINLNLSDTTDKIIAEYIWIGGSG 30
>gi|10946357|gb|AAG24873.1|AF301590_1 (AF301590) cytosolic glutamine synthetase
GSbeta1 [Glycine max]
Length = 356
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _________
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 356
0 150 300
Plus Strand HSPs:
Score = 232 (81.7 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 42/49 (85%), Positives = 45/49 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIF+DPFR GNNILVICD+YTP EPIPTNK H
Sbjct: 60 TGQAPGEDSEVILYPQAIFRDPFRRGNNILVICDAYTPAGEPIPTNKRH 108
Score = 139 (48.9 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 27/52 (51%), Positives = 38/52 (73%), Frame = +2
Query: 314 LIWISLHSRTR*LLSTF-GLGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
LI ++L T +++ + +GG G+D+RSK+RT+ PV PSELPKWNYDGS
Sbjct: 7 LINLNLSDTTEKVIAEYIWIGGSGMDLRSKARTLPGPVSDPSELPKWNYDGS 58
Score = 93 (32.7 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 16/27 (59%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NL+++ T+K+IAEYIWIGG+G
Sbjct: 4 LSDLINLNLSDTTEKVIAEYIWIGGSG 30
>gi|121373|sp|P12424|GLNA_NICPL GLUTAMINE SYNTHETASE (GLUTAMATE--AMMONIA
LIGASE) >gi|1076607|pir||JN0041 glutamate--ammonia ligase (EC
6.3.1.2) - curled-leaved tobacco >gi|170221|gb|AAA34066.1| (M19055)
glutamine synthetase (EC 6.3.1.2) [Nicotiana plumbaginifolia]
Length = 356
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _________
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 356
0 150 300
__________________
Annotated Domains:
BLOCKS BL00180A: Glutamine synthetase proteins. 53..65
BLOCKS BL00180B: Glutamine synthetase proteins. 89..107
BLOCKS BL00180C: Glutamine synthetase proteins. 125..134
BLOCKS BL00180D: Glutamine synthetase proteins. 143..164
BLOCKS BL00180E: Glutamine synthetase proteins. 178..229
BLOCKS BL00180F: Glutamine synthetase proteins. 242..254
BLOCKS BL00180G: Glutamine synthetase proteins. 327..341
PFAM gln-synt: Glutamine synthetase 17..344
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 1..53
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 56..252
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 265..353
__________________
Plus Strand HSPs:
Score = 232 (81.7 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 42/49 (85%), Positives = 45/49 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFR GNNILV+CD+YTP EPIPTNK H
Sbjct: 60 TGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 108
Score = 137 (48.2 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 26/52 (50%), Positives = 39/52 (75%), Frame = +2
Query: 314 LIWISLHSRTR*LLSTF-GLGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
LI ++L T +++ + +GG G+D+RSK+RT+S PV P++LPKWNYDGS
Sbjct: 7 LINLNLSDSTEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPAKLPKWNYDGS 58
Score = 94 (33.1 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 17/27 (62%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NL+++ T+KIIAEYIWIGG+G
Sbjct: 4 LSDLINLNLSDSTEKIIAEYIWIGGSG 30
>gi|10176966|dbj|BAB10184.1| (AB008270) glutamine synthetase [Arabidopsis
thaliana]
Length = 356
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _________
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 356
0 150 300
Plus Strand HSPs:
Score = 234 (82.4 bits), Expect = 4.4e-31, Sum P(2) = 4.4e-31
Identities = 42/49 (85%), Positives = 45/49 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPGDDSEVI+YPQAIFKDPFR GNNILV+CD+YTP EPIPTNK H
Sbjct: 60 TGQAPGDDSEVIIYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 108
Score = 134 (47.2 bits), Expect = 4.4e-31, Sum P(2) = 4.4e-31
Identities = 26/52 (50%), Positives = 37/52 (71%), Frame = +2
Query: 314 LIWISLHSRTR*LLSTF-GLGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
LI + L T +++ + +GG G+D+RSK+RT+ PV PS+LPKWNYDGS
Sbjct: 7 LINLDLSDSTDQIIAEYIWIGGSGLDMRSKARTLPGPVTDPSQLPKWNYDGS 58
Score = 99 (34.8 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 18/30 (60%), Positives = 25/30 (83%), Frame = +1
Query: 292 INRLEGLLNLDITPFTDKIIAEYIWIGGTG 381
++ L L+NLD++ TD+IIAEYIWIGG+G
Sbjct: 1 MSSLADLINLDLSDSTDQIIAEYIWIGGSG 30
>gi|121349|sp|P14656|GLN3_ORYSA GLUTAMINE SYNTHETASE SHOOT ISOZYME
(GLUTAMATE--AMMONIA LIGASE) (CLONE LAMBDA-GS28)
>gi|7428498|pir||AJRZQG glutamate--ammonia ligase (EC 6.3.1.2),
cytosolic (clone GS28) - rice >gi|20368|emb|CAA32461.1| (X14245)
cytosolic glutamine synthetase (AA 1-356) [Oryza sativa]
>gi|7804487|dbj|BAA95679.1| (AB037595) cytosolic glutamine
synthethase [Oryza sativa] >gi|7804489|dbj|BAA95678.1| (AB037664)
cytosolic glutamine synthetase [Oryza sativa]
Length = 356
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _________
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 356
0 150 300
__________________
Annotated Domains:
BLOCKS BL00180A: Glutamine synthetase proteins. 53..65
BLOCKS BL00180B: Glutamine synthetase proteins. 89..107
BLOCKS BL00180C: Glutamine synthetase proteins. 125..134
BLOCKS BL00180D: Glutamine synthetase proteins. 143..164
BLOCKS BL00180E: Glutamine synthetase proteins. 178..229
BLOCKS BL00180F: Glutamine synthetase proteins. 242..254
BLOCKS BL00180G: Glutamine synthetase proteins. 327..341
PFAM gln-synt: Glutamine synthetase 17..344
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 1..53
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 56..252
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 265..352
__________________
Plus Strand HSPs:
Score = 230 (81.0 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 42/49 (85%), Positives = 44/49 (89%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFR GNNILV+CD YTP EPIPTNK H
Sbjct: 60 TGQAPGEDSEVILYPQAIFKDPFRKGNNILVMCDCYTPAGEPIPTNKRH 108
Score = 139 (48.9 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 26/52 (50%), Positives = 39/52 (75%), Frame = +2
Query: 314 LIWISLHSRTR*LLSTF-GLGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
L+ ++L T +++ + +GG G+D+RSK+RT+S PV PS+LPKWNYDGS
Sbjct: 7 LVNLNLSDTTEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGS 58
Score = 92 (32.4 bits), Expect = 3.9e-26, Sum P(2) = 3.9e-26
Identities = 17/27 (62%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NL+++ T+KIIAEYIWIGG+G
Sbjct: 4 LTDLVNLNLSDTTEKIIAEYIWIGGSG 30
>gi|1084350|pir||S49976 glutamate--ammonia ligase (EC 6.3.1.2) - rape
>gi|599656|emb|CAA58118.1| (X82997) glutamate--ammonia ligase
[Brassica napus]
Length = 356
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _________
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 356
0 150 300
Plus Strand HSPs:
Score = 232 (81.7 bits), Expect = 5.1e-31, Sum P(2) = 5.1e-31
Identities = 42/49 (85%), Positives = 45/49 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQAIFKDPFR GNNILV+CD+YTP EPIPTNK H
Sbjct: 60 TGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 108
Score = 136 (47.9 bits), Expect = 5.1e-31, Sum P(2) = 5.1e-31
Identities = 26/52 (50%), Positives = 38/52 (73%), Frame = +2
Query: 314 LIWISLHSRTR*LLSTF-GLGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
L+ ++L T +++ + +GG G+D+RSK+RT+ PV PSELPKWNYDGS
Sbjct: 7 LVNLNLSETTDKIIAEYIWVGGSGMDMRSKARTLPGPVSDPSELPKWNYDGS 58
Score = 95 (33.4 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 17/27 (62%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NL+++ TDKIIAEYIW+GG+G
Sbjct: 4 LTDLVNLNLSETTDKIIAEYIWVGGSG 30
>gi|121348|sp|P14636|GLN3_LUPAN GLUTAMINE SYNTHETASE NODULE ISOZYME
(GLUTAMATE--AMMONIA LIGASE) >gi|68595|pir||AJYLNB
glutamate--ammonia ligase (EC 6.3.1.2), cytosolic - narrow-leaved
blue lupine (fragment) >gi|579367|emb|CAA33605.1| (X15578)
glutamine synthetase (AA 1-315) (1043 is 2nd base in codon)
[Lupinus angustifolius]
Length = 315
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): __________
Frame 1 hits (HSPs): _____
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | | | 315
0 50 100 150 200 250 300
__________________
Annotated Domains:
PFAM gln-synt: Glutamine synthetase 17..315
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Plus Strand HSPs:
Score = 224 (78.9 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 41/49 (83%), Positives = 44/49 (89%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG DSEVIL+PQAIFKDPFR GNNILVICD+YTP +PIPTNK H
Sbjct: 60 TGQAPGKDSEVILWPQAIFKDPFRRGNNILVICDTYTPSGKPIPTNKRH 108
Score = 142 (50.0 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 27/52 (51%), Positives = 39/52 (75%), Frame = +2
Query: 314 LIWISLHSRTR*LLSTF-GLGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
LI ++L T +++ + +GG G+D+RSK+RT+S PV PS+LPKWNYDGS
Sbjct: 7 LINLNLSDTTEKIIAEYIWVGGSGVDLRSKARTLSGPVNDPSKLPKWNYDGS 58
Score = 93 (32.7 bits), Expect = 7.5e-26, Sum P(2) = 7.5e-26
Identities = 16/27 (59%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NL+++ T+KIIAEYIW+GG+G
Sbjct: 4 LSDLINLNLSDTTEKIIAEYIWVGGSG 30
>gi|7437924|pir||T03253 glutamate--ammonia ligase (EC 6.3.1.2) 1-3, cytosolic -
common tobacco >gi|1419092|emb|CAA65174.1| (X95933) glutamine
synthetase [Nicotiana tabacum]
Length = 356
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _________
Frame 1 hits (HSPs): _____
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Database sequence: | | | | 356
0 150 300
Plus Strand HSPs:
Score = 223 (78.5 bits), Expect = 6.7e-31, Sum P(2) = 6.7e-31
Identities = 40/49 (81%), Positives = 43/49 (87%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVILYPQ FKDPFR GNNILV+CD+YTP EPIPTNK H
Sbjct: 60 TGQAPGEDSEVILYPQVYFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 108
Score = 146 (51.4 bits), Expect = 6.7e-31, Sum P(2) = 6.7e-31
Identities = 28/52 (53%), Positives = 40/52 (76%), Frame = +2
Query: 314 LIWISLHSRTR*LLSTF-GLGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
LI ++L T+ +++ + +GG G+D+RSK+RT+S PV PSELPKWNYDGS
Sbjct: 7 LISLNLSDSTQKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSELPKWNYDGS 58
Score = 87 (30.6 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 16/27 (59%), Positives = 22/27 (81%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L++L+++ T KIIAEYIWIGG+G
Sbjct: 4 LSDLISLNLSDSTQKIIAEYIWIGGSG 30
>gi|417060|sp|P32289|GLNA_VIGAC GLUTAMINE SYNTHETASE NODULE ISOZYME
(GLUTAMATE--AMMONIA LIGASE) (GS) >gi|170637|gb|AAA34239.1| (M94765)
glutamine synthetase [Vigna aconitifolia] >gi|1094850|prf||2106409A
Gln synthetase [Vigna aconitifolia]
Length = 356
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _________
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
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Database sequence: | | | | 356
0 150 300
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Annotated Domains:
BLOCKS BL00180A: Glutamine synthetase proteins. 53..65
BLOCKS BL00180B: Glutamine synthetase proteins. 89..107
BLOCKS BL00180C: Glutamine synthetase proteins. 125..134
BLOCKS BL00180D: Glutamine synthetase proteins. 143..164
BLOCKS BL00180E: Glutamine synthetase proteins. 178..229
BLOCKS BL00180F: Glutamine synthetase proteins. 242..254
BLOCKS BL00180G: Glutamine synthetase proteins. 327..341
PFAM gln-synt: Glutamine synthetase 17..344
PRODOM PD000821: GLNA(20) GLN1(9) GLN2(7) 1..53
PRODOM PD000349: GLNA(58) GLN1(15) GLN2(15) 56..252
PRODOM PD000733: GLNA(20) GLN2(14) GLN1(9) 265..352
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Plus Strand HSPs:
Score = 230 (81.0 bits), Expect = 7.5e-31, Sum P(2) = 7.5e-31
Identities = 41/49 (83%), Positives = 45/49 (91%), Frame = +3
Query: 471 TGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDSYTPQXEPIPTNKXH 617
TGQAPG+DSEVI+YPQAIFKDPFR GNNILV+CD+YTP EPIPTNK H
Sbjct: 60 TGQAPGEDSEVIIYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 108
Score = 137 (48.2 bits), Expect = 7.5e-31, Sum P(2) = 7.5e-31
Identities = 26/52 (50%), Positives = 38/52 (73%), Frame = +2
Query: 314 LIWISLHSRTR*LLSTF-GLGGQGIDVRSKSRTISKPVEHPSELPKWNYDGS 466
LI ++L T +++ + +GG G+D+RSK+RT+ PV PS+LPKWNYDGS
Sbjct: 7 LINLNLSDTTEKIIAEYIWIGGSGLDLRSKARTLPGPVSDPSKLPKWNYDGS 58
Score = 94 (33.1 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 17/27 (62%), Positives = 23/27 (85%), Frame = +1
Query: 301 LEGLLNLDITPFTDKIIAEYIWIGGTG 381
L L+NL+++ T+KIIAEYIWIGG+G
Sbjct: 4 LSDLINLNLSDTTEKIIAEYIWIGGSG 30
WARNING: HSPs involving 154 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.345 0.153 0.522
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.347 0.153 0.578
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.344 0.147 0.498
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.355 0.162 0.618
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.342 0.149 0.487
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.361 0.159 0.620
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 206 203 10. 77 3 12 22 0.095 35
31 0.11 38
+2 0 206 203 10. 77 3 12 22 0.095 35
31 0.11 38
+1 0 207 203 10. 77 3 12 22 0.095 35
31 0.11 38
-1 0 207 204 10. 77 3 12 22 0.096 35
31 0.11 38
-2 0 206 203 10. 77 3 12 22 0.095 35
31 0.11 38
-3 0 206 203 10. 77 3 12 22 0.095 35
31 0.11 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 204
No. of states in DFA: 598 (59 KB)
Total size of DFA: 244 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 205.42u 1.02s 206.44t Elapsed: 00:00:35
Total cpu time: 205.49u 1.04s 206.53t Elapsed: 00:00:35
Start: Mon Oct 1 20:14:27 2001 End: Mon Oct 1 20:15:02 2001
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000