BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SSA_0379
(643 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|125717248|ref|YP_001034381.1| PTS system, beta-glucoside... 1178 0.0
gi|24379420|ref|NP_721375.1| putative PTS system, beta-gluc... 900 0.0
gi|9622919|gb|AAF89975.1|AF206272_1 beta-glucoside-specific... 894 0.0
gi|157076047|gb|ABV10730.1| PTS system, beta-glucoside-spec... 740 0.0
gi|81096853|ref|ZP_00875181.1| Sugar-specific permease, EII... 662 0.0
gi|16799105|ref|NP_469373.1| hypothetical protein lin0026 [... 595 e-168
gi|116871452|ref|YP_848233.1| PTS system, beta-glucoside-sp... 590 e-167
gi|16802075|ref|NP_463560.1| hypothetical protein lmo0027 [... 587 e-166
gi|1100076|gb|AAC05713.1| PTS-dependent enzyme II [Clostrid... 587 e-165
gi|150018104|ref|YP_001310358.1| PTS system, beta-glucoside... 581 e-164
gi|58337042|ref|YP_193627.1| phosphotransferase system enzy... 580 e-164
gi|116630227|ref|YP_815399.1| Trehalose PTS trehalose compo... 576 e-162
gi|15613158|ref|NP_241461.1| PTS system, beta-glucoside-spe... 574 e-162
gi|145953556|ref|ZP_01802564.1| hypothetical protein CdifQ_... 571 e-161
gi|28379841|ref|NP_786733.1| beta-glucosides PTS, EIIBCA [L... 567 e-160
gi|15894686|ref|NP_348035.1| PTS system, beta-glucosides-sp... 564 e-159
gi|152974600|ref|YP_001374117.1| PTS system, beta-glucoside... 563 e-158
gi|52144365|ref|YP_082463.1| PTS system, beta-glucoside-spe... 563 e-158
gi|126700714|ref|YP_001089611.1| PTS system, IIabc componen... 561 e-158
gi|49477026|ref|YP_035218.1| probable PTS system, beta-gluc... 551 e-155
gi|153815619|ref|ZP_01968287.1| hypothetical protein RUMTOR... 542 e-152
gi|29374910|ref|NP_814063.1| PTS system, beta-glucoside-spe... 539 e-151
gi|126700743|ref|YP_001089640.1| PTS system, IIabc componen... 532 e-149
gi|145953594|ref|ZP_01802602.1| hypothetical protein CdifQ_... 529 e-148
gi|125623876|ref|YP_001032359.1| similar to PTS system, bet... 525 e-147
gi|15673442|ref|NP_267616.1| beta-glucoside-specific PTS sy... 523 e-146
gi|69248111|ref|ZP_00604626.1| Sugar-specific permease, EII... 496 e-138
gi|29377084|ref|NP_816238.1| PTS system, beta-glucoside-spe... 474 e-132
gi|58337744|ref|YP_194329.1| PTS enzyme IIABC [Lactobacillu... 469 e-130
gi|146312382|ref|YP_001177456.1| PTS system, beta-glucoside... 461 e-128
gi|15612859|ref|NP_241162.1| PTS system, beta-glucoside-spe... 456 e-126
gi|50120800|ref|YP_049967.1| PTS system, beta-glucoside-spe... 452 e-125
gi|45181608|gb|AAS55458.1| BglP [Pectobacterium carotovorum... 448 e-124
gi|131487|sp|P26207|PTV3B_ERWCH PTS system beta-glucoside-s... 447 e-123
gi|77979132|ref|ZP_00834553.1| COG1263: Phosphotransferase ... 446 e-123
gi|52082481|ref|YP_081272.1| phosphotransferase system (PTS... 442 e-122
gi|50119609|ref|YP_048776.1| PTS system, beta-glucoside-spe... 442 e-122
gi|69245797|ref|ZP_00603640.1| Sugar-specific permease, EII... 435 e-120
gi|26250462|ref|NP_756502.1| PTS system, beta-glucoside-spe... 434 e-120
gi|110644063|ref|YP_671793.1| PTS system, beta-glucoside-sp... 432 e-119
gi|75231008|ref|ZP_00717443.1| COG1263: Phosphotransferase ... 432 e-119
gi|56965548|ref|YP_177282.1| PTS system, glucose-specific e... 431 e-119
gi|83588413|ref|ZP_00927037.1| COG1263: Phosphotransferase ... 431 e-119
gi|91213245|ref|YP_543231.1| PTS system, beta-glucoside-spe... 430 e-118
gi|75188477|ref|ZP_00701744.1| COG1263: Phosphotransferase ... 430 e-118
gi|75236451|ref|ZP_00720547.1| COG1263: Phosphotransferase ... 430 e-118
gi|74314264|ref|YP_312683.1| PTS system beta-glucoside-spec... 430 e-118
gi|117625995|ref|YP_859318.1| PTS system, beta-glucoside-sp... 429 e-118
gi|16131590|ref|NP_418178.1| fused beta-glucoside-specific ... 429 e-118
gi|77975589|ref|ZP_00831124.1| COG1263: Phosphotransferase ... 429 e-118
gi|75197618|ref|ZP_00707688.1| COG1263: Phosphotransferase ... 429 e-118
gi|152971117|ref|YP_001336226.1| putative cellobiose-specif... 429 e-118
gi|110349495|gb|ABG73228.1| beta-glucoside transport protei... 429 e-118
gi|75258261|ref|ZP_00729709.1| COG1263: Phosphotransferase ... 428 e-118
gi|42519186|ref|NP_965116.1| phosphoenolpyruvate-dependent ... 427 e-118
gi|290570|gb|AAA62073.1| transport protein 427 e-117
gi|47096121|ref|ZP_00233721.1| PTS system, beta-glucoside-s... 426 e-117
gi|16803075|ref|NP_464560.1| hypothetical protein lmo1035 [... 426 e-117
gi|75210668|ref|ZP_00710809.1| COG1263: Phosphotransferase ... 426 e-117
gi|153174100|ref|ZP_01929662.1| PTS system, beta-glucoside-... 426 e-117
gi|153176093|ref|ZP_01931352.1| PTS system, glucose subfami... 425 e-117
gi|61970257|gb|AAX57579.1| CasF [Pectobacterium carotovorum... 425 e-117
gi|153197376|ref|ZP_01941626.1| PTS system, glucose subfami... 424 e-116
gi|30065037|ref|NP_839208.1| PTS system beta-glucosides, en... 424 e-116
gi|16804824|ref|NP_466309.1| beta-glucoside-specific phosph... 423 e-116
gi|46907267|ref|YP_013656.1| PTS system, beta-glucoside-spe... 423 e-116
gi|47095594|ref|ZP_00233202.1| PTS system, glucose subfamil... 423 e-116
gi|4138149|emb|CAA07717.1| PTS enzyme II [Listeria monocyto... 422 e-116
gi|28379828|ref|NP_786720.1| beta-glucosides PTS, EIIBCA [L... 413 e-113
gi|154503022|ref|ZP_02040082.1| hypothetical protein RUMGNA... 410 e-112
gi|75242490|ref|ZP_00726234.1| COG1263: Phosphotransferase ... 409 e-112
gi|110807583|ref|YP_691103.1| PTS system beta-glucosides, e... 404 e-110
gi|126698396|ref|YP_001087293.1| PTS system, IIabc componen... 403 e-110
gi|1432153|gb|AAB51563.1| cellobiose-specific PTS permease ... 402 e-110
gi|16802780|ref|NP_464265.1| hypothetical protein lmo0738 [... 402 e-110
gi|153173659|ref|ZP_01929373.1| PTS system, glucose subfami... 401 e-109
gi|145296705|ref|YP_001139526.1| hypothetical protein cgR_2... 393 e-107
gi|116618010|ref|YP_818381.1| Trehalose PTS trehalose compo... 392 e-107
gi|16080978|ref|NP_391806.1| phosphotransferase system (PTS... 389 e-106
gi|730418|sp|P40739|PTV3B_BACSU PTS system beta-glucoside-s... 386 e-105
gi|6851033|emb|CAB71150.1| permease [Lactobacillus plantarum] 385 e-105
gi|152978649|ref|YP_001344278.1| PTS system, beta-glucoside... 384 e-105
gi|52082496|ref|YP_081287.1| phosphotransferase system (PTS... 384 e-104
gi|148378873|ref|YP_001253414.1| PTS system, beta-glucoside... 379 e-103
gi|28379609|ref|NP_786501.1| beta-glucosides PTS, EIIBCA [L... 379 e-103
gi|150017683|ref|YP_001309937.1| PTS system, beta-glucoside... 378 e-103
gi|68053767|ref|ZP_00537932.1| Sugar-specific permease, EII... 376 e-102
gi|154688035|ref|YP_001423196.1| BglP [Bacillus amyloliquef... 376 e-102
gi|153938120|ref|YP_001390230.1| PTS system, beta-glucoside... 376 e-102
gi|153940854|ref|YP_001392130.1| PTS system, beta-glucoside... 372 e-101
gi|116495647|ref|YP_807381.1| Trehalose PTS trehalose compo... 370 e-100
gi|154505065|ref|ZP_02041803.1| hypothetical protein RUMGNA... 368 e-100
gi|123442367|ref|YP_001006346.1| PTS system beta-glucoside-... 366 2e-99
gi|116874135|ref|YP_850916.1| PTS system, beta-glucoside-sp... 364 1e-98
gi|46908961|ref|YP_015350.1| PTS system, beta-glucoside-spe... 362 7e-98
gi|153204414|ref|ZP_01945211.1| PTS system, beta-glucoside-... 361 9e-98
gi|47092662|ref|ZP_00230449.1| PTS system, beta-glucoside-s... 361 9e-98
gi|113374069|dbj|BAF03596.1| hypothetical protein [Staphylo... 359 3e-97
gi|47095580|ref|ZP_00233188.1| PTS system, beta-glucoside-s... 359 3e-97
gi|16804809|ref|NP_466294.1| hypothetical protein lmo2772 [... 358 9e-97
gi|50119802|ref|YP_048969.1| PTS system, IIabc component [E... 358 9e-97
gi|118066608|ref|ZP_01534867.1| PTS system, beta-glucoside-... 356 3e-96
gi|116871689|ref|YP_848470.1| PTS system, beta-glucoside-sp... 355 5e-96
gi|50123306|ref|YP_052473.1| PTS system, IIabc component [E... 350 1e-94
gi|148378655|ref|YP_001253196.1| PTS system, beta-glucoside... 347 1e-93
gi|126700755|ref|YP_001089652.1| PTS system, IIabc componen... 346 3e-93
gi|62198728|gb|AAX76614.1| BglH [Pectobacterium carotovorum... 345 6e-93
gi|15674662|ref|NP_268836.1| beta-glucoside permease IIABC ... 344 1e-92
gi|153853745|ref|ZP_01995101.1| hypothetical protein DORLON... 344 1e-92
gi|153938493|ref|YP_001390012.1| PTS system, beta-glucoside... 343 3e-92
gi|154505100|ref|ZP_02041838.1| hypothetical protein RUMGNA... 342 4e-92
gi|71903122|ref|YP_279925.1| PTS system, beta-glucoside-spe... 342 4e-92
gi|94988098|ref|YP_596199.1| PTS system, beta-glucoside-spe... 342 5e-92
gi|139474209|ref|YP_001128925.1| beta-glucoside-specific ph... 341 9e-92
gi|28377737|ref|NP_784629.1| beta-glucosides PTS, EIIBCA [L... 340 1e-91
gi|21909940|ref|NP_664208.1| putative beta-glucoside permea... 339 3e-91
gi|50913845|ref|YP_059817.1| PTS system, beta-glucoside-spe... 338 5e-91
gi|56808054|ref|ZP_00365852.1| COG1263: Phosphotransferase ... 338 8e-91
gi|118587597|ref|ZP_01545021.1| PTS system, beta-glucoside-... 338 9e-91
gi|94993893|ref|YP_601991.1| PTS system, beta-glucoside-spe... 337 2e-90
gi|116630309|ref|YP_815551.1| beta-glucosides PTS, EIIBCA [... 335 4e-90
gi|94989978|ref|YP_598078.1| PTS system, beta-glucoside-spe... 335 5e-90
gi|28379541|ref|NP_786433.1| beta-glucosides PTS, EIIBCA [L... 335 9e-90
gi|77408875|ref|ZP_00785601.1| PTS system, beta-glucosides-... 334 1e-89
gi|15902549|ref|NP_358099.1| Phosphotransferase system suga... 334 1e-89
gi|58337965|ref|YP_194550.1| beta-glucoside permease [Lacto... 333 2e-89
gi|149010803|ref|ZP_01832174.1| PTS system, beta-glucosides... 333 3e-89
gi|150019654|ref|YP_001311908.1| PTS system, beta-glucoside... 332 3e-89
gi|148998250|ref|ZP_01825719.1| PTS system, beta-glucosides... 332 6e-89
gi|37524587|ref|NP_927931.1| beta-glucoside-specific phosph... 332 7e-89
gi|58337838|ref|YP_194423.1| beta-glucoside-specific enzyme... 330 3e-88
gi|148992313|ref|ZP_01822036.1| PTS system, beta-glucosides... 329 4e-88
gi|148988940|ref|ZP_01820340.1| PTS system, beta-glucosides... 329 4e-88
gi|148983956|ref|ZP_01817275.1| PTS system, beta-glucosides... 328 5e-88
gi|149005688|ref|ZP_01829427.1| PTS system, beta-glucosides... 328 8e-88
gi|19745690|ref|NP_606826.1| beta-glucoside permease IIABC ... 328 9e-88
gi|145296827|ref|YP_001139648.1| hypothetical protein cgR_2... 327 2e-87
gi|146319144|ref|YP_001198856.1| Phosphotransferase system ... 323 2e-86
gi|22536954|ref|NP_687805.1| PTS system, beta-glucosides-sp... 323 2e-86
gi|81096529|ref|ZP_00874870.1| Sugar-specific permease, EII... 323 2e-86
gi|15900487|ref|NP_345091.1| PTS system, beta-glucosides-sp... 323 2e-86
gi|24380203|ref|NP_722158.1| putative PTS system, sucrose-s... 322 4e-86
gi|126697957|ref|YP_001086854.1| PTS system, beta-glucoside... 322 7e-86
gi|139437221|ref|ZP_01771381.1| Hypothetical protein COLAER... 321 9e-86
gi|15893714|ref|NP_347063.1| Fusion: PTS system, beta-gluco... 320 1e-85
gi|77958041|ref|ZP_00822082.1| COG1263: Phosphotransferase ... 319 3e-85
gi|154503235|ref|ZP_02040295.1| hypothetical protein RUMGNA... 319 5e-85
gi|77413584|ref|ZP_00789771.1| PTS system, beta-glucosides-... 318 5e-85
gi|69249431|ref|ZP_00604974.1| Sugar-specific permease, EII... 318 1e-84
gi|42519782|ref|NP_965712.1| phosphoenolpyruvate-dependent ... 317 2e-84
gi|52079180|ref|YP_077971.1| phosphotransferase system (PTS... 315 4e-84
gi|145955694|ref|ZP_01804695.1| hypothetical protein CdifQ_... 312 6e-83
gi|116670443|ref|YP_831376.1| PTS system, beta-glucoside-sp... 311 1e-82
gi|153815503|ref|ZP_01968171.1| hypothetical protein RUMTOR... 309 4e-82
gi|37524589|ref|NP_927933.1| hypothetical protein plu0585 [... 305 7e-81
gi|145296639|ref|YP_001139460.1| hypothetical protein cgR_2... 303 2e-80
gi|116494604|ref|YP_806338.1| beta-glucosides PTS, EIIBCA [... 303 3e-80
gi|150019647|ref|YP_001311901.1| PTS system, glucose subfam... 303 3e-80
gi|4704715|gb|AAD28228.1|AF121254_10 beta-glucoside specifi... 302 5e-80
gi|19553840|ref|NP_601842.1| phosphotransferase system IIC ... 300 1e-79
gi|71910288|ref|YP_281838.1| PTS system, beta-glucoside-spe... 300 2e-79
gi|157074858|gb|ABV09541.1| trehalose PTS enzyme II [Strept... 299 5e-79
gi|55821706|ref|YP_140148.1| sucrose PTS component II [Stre... 296 3e-78
gi|55823626|ref|YP_142067.1| sucrose-specific PTS permease,... 296 3e-78
gi|73661432|ref|YP_300213.1| putative phosphotransferase sy... 295 8e-78
gi|116628430|ref|YP_821049.1| sucrose PTS, EIIBCA [Streptoc... 293 2e-77
gi|148984166|ref|ZP_01817461.1| PTS system, IIABC component... 293 3e-77
gi|146317887|ref|YP_001197599.1| Phosphotransferase system ... 292 5e-77
gi|149011411|ref|ZP_01832658.1| PTS system, IIABC component... 291 9e-77
gi|81177165|ref|ZP_00876037.1| Sugar-specific permease, EII... 291 1e-76
gi|125718551|ref|YP_001035684.1| Phosphotransferase system,... 290 2e-76
gi|116617417|ref|YP_817788.1| sucrose PTS, EIIBCA [Leuconos... 290 2e-76
gi|90961054|ref|YP_534970.1| PTS system, sucrose-specific I... 290 3e-76
gi|149006609|ref|ZP_01830308.1| PTS system IIABC component ... 290 3e-76
gi|149002025|ref|ZP_01826979.1| PTS system IIABC component ... 290 3e-76
gi|24380379|ref|NP_722334.1| putative PTS system, trehalose... 290 3e-76
gi|76788255|ref|YP_328925.1| PTS system, trehalose-specific... 289 4e-76
gi|25010264|ref|NP_734659.1| hypothetical protein gbs0189 [... 288 6e-76
gi|22536376|ref|NP_687227.1| PTS system, IIABC components [... 288 7e-76
gi|81096156|ref|ZP_00874505.1| Sugar-specific permease, EII... 288 7e-76
gi|42519806|ref|NP_965736.1| phosphoenolpyruvate-dependent ... 287 1e-75
gi|154509669|ref|ZP_02045311.1| hypothetical protein ACTODO... 287 1e-75
gi|116630331|ref|YP_815592.1| Sucrose PTS, EIIBCA [Lactobac... 287 2e-75
gi|58336738|ref|YP_193323.1| sucrose PTS II ABC [Lactobacil... 286 2e-75
gi|15903609|ref|NP_359159.1| Phosphotransferase system enzy... 286 3e-75
gi|15903741|ref|NP_359291.1| Phosphotransferase system, tre... 286 3e-75
gi|126700733|ref|YP_001089630.1| PTS system, beta-glucoside... 286 4e-75
gi|15901555|ref|NP_346159.1| PTS system IIABC components [S... 285 6e-75
gi|145953576|ref|ZP_01802584.1| hypothetical protein CdifQ_... 285 6e-75
gi|157076120|gb|ABV10803.1| PTS system, IIABC components [S... 284 1e-74
gi|146319471|ref|YP_001199183.1| Phosphotransferase system ... 284 1e-74
gi|149025008|ref|ZP_01836388.1| trehalose PTS system, IIABC... 283 2e-74
gi|116517080|ref|YP_817114.1| PTS system, trehalose-specifi... 282 5e-74
gi|123441740|ref|YP_001005724.1| Putative PTS-system permea... 281 7e-74
gi|77975407|ref|ZP_00830942.1| COG1263: Phosphotransferase ... 281 8e-74
gi|77956344|ref|ZP_00820451.1| COG1263: Phosphotransferase ... 281 9e-74
gi|148998748|ref|ZP_01826186.1| trehalose PTS system, IIABC... 280 2e-73
gi|149013399|ref|ZP_01834102.1| trehalose PTS system, IIABC... 280 2e-73
gi|156934710|ref|YP_001438626.1| hypothetical protein ESA_0... 280 3e-73
gi|148994656|ref|ZP_01823781.1| trehalose PTS system, IIABC... 280 3e-73
gi|149006461|ref|ZP_01830160.1| trehalose PTS system, IIABC... 280 3e-73
gi|148984336|ref|ZP_01817631.1| trehalose PTS system, IIABC... 280 3e-73
gi|4581477|emb|CAB09690.1| enzyme II sucrose protein [Lacto... 279 4e-73
gi|29377861|ref|NP_816989.1| PTS system, IIABC components [... 279 6e-73
gi|77962633|ref|ZP_00826451.1| COG1263: Phosphotransferase ... 278 6e-73
gi|145956299|ref|ZP_01805296.1| hypothetical protein CdifQ_... 278 6e-73
gi|15901712|ref|NP_346316.1| trehalose PTS system, IIABC co... 278 7e-73
gi|19746751|ref|NP_607887.1| putative sucrose-specific PTS ... 277 2e-72
gi|125717321|ref|YP_001034454.1| Phosphotransferase system ... 277 2e-72
gi|116629069|ref|YP_814241.1| sucrose PTS, EIIBCA [Lactobac... 277 2e-72
gi|77976287|ref|ZP_00831789.1| COG1263: Phosphotransferase ... 276 4e-72
gi|81429404|ref|YP_396405.1| Sucrose-specific phosphotransf... 275 6e-72
gi|28377125|ref|NP_784017.1| sucrose PTS, EIIBCA [Lactobaci... 275 7e-72
gi|94989425|ref|YP_597526.1| PTS system, trehalose-specific... 275 9e-72
gi|148989381|ref|ZP_01820749.1| PTS system IIABC component ... 274 2e-71
gi|139473184|ref|YP_001127899.1| putative sucrose-specific ... 273 2e-71
gi|2126626|pir||S68599 phosphotransferase system enzyme II ... 273 3e-71
gi|25011774|ref|NP_736169.1| hypothetical protein gbs1734 [... 273 3e-71
gi|116492316|ref|YP_804051.1| sucrose PTS, EIIBCA [Pediococ... 273 3e-71
gi|1172744|sp|P43470|PTS3B_PEDPE PTS system sucrose-specifi... 272 5e-71
gi|77412406|ref|ZP_00788714.1| PTS system, IIABC components... 272 6e-71
gi|75514215|ref|ZP_00736523.1| COG1263: Phosphotransferase ... 271 1e-70
gi|22537830|ref|NP_688681.1| PTS system, IIABC components [... 271 1e-70
gi|94991360|ref|YP_599460.1| PTS system, trehalose-specific... 270 2e-70
gi|50915129|ref|YP_061101.1| PTS system, trehalose-specific... 270 3e-70
gi|19746968|ref|NP_608104.1| putative PTS system enzyme II ... 269 4e-70
gi|77409008|ref|ZP_00785728.1| PTS system, IIABC components... 269 4e-70
gi|139474542|ref|YP_001129258.1| sugar phosphotransferase s... 269 5e-70
gi|116495559|ref|YP_807293.1| sucrose PTS, EIIBCA [Lactobac... 268 6e-70
gi|76787932|ref|YP_330304.1| PTS system, sucrose-specific I... 268 6e-70
gi|56808422|ref|ZP_00366171.1| COG1263: Phosphotransferase ... 268 1e-69
gi|21911322|ref|NP_665590.1| putative PTS system enzyme II ... 268 1e-69
gi|153855061|ref|ZP_01996255.1| hypothetical protein DORLON... 267 2e-69
gi|94995272|ref|YP_603370.1| PTS system, trehalose-specific... 266 2e-69
gi|15675853|ref|NP_270027.1| putative PTS system enzyme II ... 266 3e-69
gi|71904430|ref|YP_281233.1| PTS system, trehalose-specific... 266 3e-69
gi|71904191|ref|YP_280994.1| PTS system, sucrose-specific I... 266 5e-69
gi|94991118|ref|YP_599218.1| PTS system, sucrose-specific I... 266 5e-69
gi|21911105|ref|NP_665373.1| putative sucrose-specific PTS ... 265 8e-69
gi|154496800|ref|ZP_02035496.1| hypothetical protein BACCAP... 263 2e-68
gi|94994997|ref|YP_603095.1| PTS system, sucrose-specific I... 263 2e-68
gi|71911355|ref|YP_282905.1| PTS system, sucrose-specific I... 263 3e-68
gi|94989176|ref|YP_597277.1| PTS system, sucrose-specific I... 263 3e-68
gi|116511978|ref|YP_809194.1| sucrose-specific PTS system I... 262 5e-68
gi|154505191|ref|ZP_02041929.1| hypothetical protein RUMGNA... 262 5e-68
gi|38233741|ref|NP_939508.1| PTS system, glucose-specific I... 261 2e-67
gi|3098512|gb|AAC27701.1| glucose permease [Corynebacterium... 260 2e-67
gi|82393807|gb|ABB72199.1| glucose permease [Brevibacterium... 260 2e-67
gi|76798556|ref|ZP_00780788.1| beta-glucoside permease IIAB... 260 3e-67
gi|19552574|ref|NP_600576.1| phosphotransferase system IIC ... 259 3e-67
gi|28379599|ref|NP_786491.1| sucrose PTS, EIIBCA [Lactobaci... 259 3e-67
gi|145295497|ref|YP_001138318.1| hypothetical protein cgR_1... 259 3e-67
gi|50914877|ref|YP_060849.1| PTS system, sucrose-specific I... 259 4e-67
gi|146313596|ref|YP_001178670.1| PTS system, beta-glucoside... 258 6e-67
gi|125624237|ref|YP_001032720.1| sucrose-specific PTS syste... 258 1e-66
gi|14994145|gb|AAK76444.1|AF392619_1 phosphoenolpyruvate:su... 258 1e-66
gi|28377190|ref|NP_784082.1| beta-glucosides PTS, EIIABC [L... 257 2e-66
gi|2499996|sp|Q45298|PTG3B_CORGL PTS system glucose-specifi... 256 5e-66
gi|28379617|ref|NP_786509.1| beta-glucosides PTS, EIIABC [L... 255 7e-66
gi|154509401|ref|ZP_02045043.1| hypothetical protein ACTODO... 255 9e-66
gi|69246022|ref|ZP_00603771.1| Phosphotransferase system PT... 254 9e-66
gi|15675645|ref|NP_269819.1| putative sucrose-specific PTS ... 254 1e-65
gi|29376161|ref|NP_815315.1| PTS system, IIABC components [... 252 5e-65
gi|153855745|ref|ZP_01996759.1| hypothetical protein DORLON... 249 5e-64
gi|149002253|ref|ZP_01827195.1| PTS system, beta-glucosides... 248 1e-63
gi|58337307|ref|YP_193892.1| trehalose PTS II ABC [Lactobac... 246 3e-63
gi|154504942|ref|ZP_02041680.1| hypothetical protein RUMGNA... 246 5e-63
gi|22536466|ref|NP_687317.1| PTS system, IIBC components [S... 241 1e-61
gi|42518682|ref|NP_964612.1| phosphoenolpyruvate-dependent ... 240 2e-61
gi|25010346|ref|NP_734741.1| hypothetical protein gbs0272 [... 239 3e-61
gi|77414051|ref|ZP_00790221.1| PTS system, IIBC components ... 239 4e-61
gi|116629198|ref|YP_814370.1| beta-glucoside-specific PTS s... 237 2e-60
gi|34581787|gb|AAQ76045.1| unknown [Ruminococcus gnavus] 237 2e-60
gi|116491331|ref|YP_810875.1| beta-glucoside-specific PTS s... 234 1e-59
gi|116494181|ref|YP_805915.1| beta-glucoside-specific PTS s... 234 1e-59
gi|118586605|ref|ZP_01544046.1| PTS system, beta-glucoside-... 233 4e-59
gi|145953596|ref|ZP_01802604.1| hypothetical protein CdifQ_... 232 5e-59
gi|116493531|ref|YP_805266.1| Beta-glucoside-specific PTS s... 231 1e-58
gi|28377191|ref|NP_784083.1| beta-glucosides PTS, EIIABC [L... 231 1e-58
gi|126698045|ref|YP_001086942.1| PTS system, IIabc componen... 230 3e-58
gi|126700745|ref|YP_001089642.1| PTS system, IIabc componen... 229 6e-58
gi|81428812|ref|YP_395812.1| Putative trehalose and glucose... 228 9e-58
gi|90962483|ref|YP_536399.1| PTS system, trehalose-specific... 228 1e-57
gi|69248276|ref|ZP_00604700.1| Sugar-specific permease, EII... 227 2e-57
gi|15217138|gb|AAK92528.1|AF401046_1 sucrose-specific enzym... 227 2e-57
gi|149011178|ref|ZP_01832483.1| PTS system, IIabc component... 226 3e-57
gi|94993064|ref|YP_601163.1| PTS system, sucrose-specific I... 223 3e-56
gi|89096602|ref|ZP_01169494.1| PTS system, IIabc component ... 222 7e-56
gi|116871698|ref|YP_848479.1| PTS system, beta-glucoside-sp... 221 1e-55
gi|148974166|ref|ZP_01811699.1| fused cellobiose/arbutin/sa... 219 7e-55
gi|116493691|ref|YP_805425.1| sucrose-specific PTS system I... 218 8e-55
gi|116492805|ref|YP_804540.1| sucrose-specific PTS system I... 217 2e-54
gi|116617626|ref|YP_817997.1| beta-glucoside-specific PTS s... 216 3e-54
gi|90409960|ref|ZP_01217977.1| PTS family enzyme IIBC compo... 215 7e-54
gi|58337963|ref|YP_194548.1| PTS system IIBC component [Lac... 215 7e-54
gi|150015585|ref|YP_001307839.1| phosphotransferase system,... 214 1e-53
gi|145955900|ref|ZP_01804900.1| hypothetical protein CdifQ_... 214 2e-53
gi|50119148|ref|YP_048315.1| PTS system, IIabc component [E... 213 3e-53
gi|154504647|ref|ZP_02041385.1| hypothetical protein RUMGNA... 212 6e-53
gi|50812303|ref|NP_391684.2| phosphotransferase system (PTS... 211 9e-53
gi|55820594|ref|YP_139036.1| beta-glucoside PTS system comp... 209 7e-52
gi|42519869|ref|NP_965799.1| phosphoenolpyruvate-dependent ... 208 8e-52
gi|146310594|ref|YP_001175668.1| phosphotransferase system,... 207 2e-51
gi|69246021|ref|ZP_00603770.1| Sugar-specific permease, EII... 205 1e-50
gi|146312829|ref|YP_001177903.1| PTS system, maltose and gl... 204 1e-50
gi|69245066|ref|ZP_00603224.1| Sugar-specific permease, EII... 204 2e-50
gi|75187434|ref|ZP_00700701.1| COG1263: Phosphotransferase ... 204 2e-50
gi|75235692|ref|ZP_00719866.1| COG1263: Phosphotransferase ... 203 3e-50
gi|48526331|gb|AAT45374.1| AscF [Pectobacterium carotovorum... 202 6e-50
gi|75210914|ref|ZP_00711038.1| COG1263: Phosphotransferase ... 202 8e-50
gi|83585626|ref|ZP_00924269.1| COG1263: Phosphotransferase ... 202 8e-50
gi|77979109|ref|ZP_00834530.1| COG1263: Phosphotransferase ... 202 9e-50
gi|50121093|ref|YP_050260.1| PTS system, arbutin-, cellobio... 201 9e-50
gi|77414824|ref|ZP_00790942.1| PTS system, IIABC components... 201 9e-50
gi|145387|gb|AAA16429.1| PTS enzyme II-asc 201 1e-49
gi|75230079|ref|ZP_00716589.1| COG1263: Phosphotransferase ... 201 1e-49
gi|157085458|gb|ABV15136.1| hypothetical protein CKO_04070 ... 201 1e-49
gi|74313279|ref|YP_311698.1| PTS system enzyme II ABC (asc)... 201 1e-49
gi|49176263|ref|YP_026182.1| fused cellobiose/arbutin/salic... 201 2e-49
gi|15803232|ref|NP_289264.1| PTS system enzyme II ABC (asc)... 201 2e-49
gi|156936591|ref|YP_001440505.1| hypothetical protein ESA_p... 200 2e-49
gi|82545210|ref|YP_409157.1| PTS system enzyme II ABC (asc)... 200 3e-49
gi|110806660|ref|YP_690180.1| PTS family enzyme IIBC compon... 200 3e-49
gi|52424839|ref|YP_087976.1| PtsG protein [Mannheimia succi... 199 5e-49
gi|75241658|ref|ZP_00725495.1| COG1263: Phosphotransferase ... 199 6e-49
gi|77957988|ref|ZP_00822030.1| COG1263: Phosphotransferase ... 198 9e-49
gi|75176426|ref|ZP_00696570.1| COG1263: Phosphotransferase ... 197 1e-48
gi|90414841|ref|ZP_01222808.1| PTS system, sucrose-specific... 197 1e-48
gi|53728948|ref|ZP_00134390.2| COG1263: Phosphotransferase ... 197 1e-48
gi|116490395|ref|YP_809939.1| Phosphotransferase system IIB... 197 2e-48
gi|126208783|ref|YP_001054008.1| PTS system sucrose-specifi... 197 2e-48
gi|1709907|sp|P51184|PTSBC_STAXY PTS system sucrose-specifi... 197 2e-48
gi|156935546|ref|YP_001439462.1| hypothetical protein ESA_0... 197 2e-48
gi|152971573|ref|YP_001336682.1| PTS family enzyme IIBC com... 197 2e-48
gi|91212074|ref|YP_542060.1| PTS enzyme II-asc [Escherichia... 197 2e-48
gi|882608|gb|AAA69225.1| phosphotransferase enzyme IIABC-Asc 197 3e-48
gi|30260785|ref|NP_843162.1| PTS system, trehalose-specific... 196 4e-48
gi|49480220|ref|YP_034889.1| protein-N(pi)-phosphohistidine... 196 4e-48
gi|123441593|ref|YP_001005579.1| PTS transport protein [Yer... 196 4e-48
gi|42779777|ref|NP_977024.1| PTS system, trehalose-specific... 196 4e-48
gi|77962585|ref|ZP_00826403.1| COG1263: Phosphotransferase ... 196 5e-48
gi|30018816|ref|NP_830447.1| PTS system, trehalose-specific... 196 5e-48
gi|73661821|ref|YP_300602.1| PTS system sucrose-specific II... 196 6e-48
gi|15603711|ref|NP_246785.1| PtsB [Pasteurella multocida su... 196 6e-48
gi|75759403|ref|ZP_00739498.1| PTS system, trehalose-specif... 195 8e-48
gi|139440012|ref|ZP_01773335.1| Hypothetical protein COLAER... 195 9e-48
gi|52144680|ref|YP_082148.1| protein-N(pi)-phosphohistidine... 194 1e-47
gi|118069052|ref|ZP_01537300.1| phosphotransferase system, ... 194 2e-47
gi|11127690|gb|AAG31031.1|AF229829_2 TreP [Pseudomonas fluo... 194 2e-47
gi|77975563|ref|ZP_00831098.1| COG1263: Phosphotransferase ... 194 2e-47
gi|116220699|ref|ZP_01486124.1| hypothetical protein VchoV5... 193 2e-47
gi|116190353|ref|ZP_01480093.1| hypothetical protein VchoM_... 193 3e-47
gi|27468877|ref|NP_765514.1| PTS system sucrose-specific II... 193 3e-47
gi|15614419|ref|NP_242722.1| PTS system, sucrose-specific e... 192 6e-47
gi|146311674|ref|YP_001176748.1| PTS system, sucrose-specif... 192 6e-47
gi|150424176|gb|EDN16114.1| PTS system, sucrose-specific II... 192 7e-47
gi|70732258|ref|YP_262014.1| PTS system, trehalose-specific... 192 8e-47
gi|70725672|ref|YP_252586.1| PTS system sucrose-specific II... 192 9e-47
gi|153816257|ref|ZP_01968925.1| hypothetical protein RUMTOR... 191 1e-46
gi|22900934|gb|AAN06918.1| TreP [Pseudomonas fluorescens] 191 1e-46
gi|91224066|ref|ZP_01259329.1| PTS system, sucrose-specific... 191 1e-46
gi|116216396|ref|ZP_01482257.1| hypothetical protein VchoR_... 191 1e-46
gi|153800857|ref|ZP_01955443.1| PTS system, sucrose-specifi... 191 2e-46
gi|30023990|ref|NP_266583.2| beta-glucoside-specific PTS sy... 190 2e-46
gi|153211875|ref|ZP_01947722.1| PTS system, sucrose-specifi... 190 2e-46
gi|1841954|gb|AAB72022.1| sucrose enzyme II [Geobacillus st... 190 2e-46
gi|121725885|ref|ZP_01679185.1| PTS system, sucrose-specifi... 190 3e-46
gi|75812282|dbj|BAE45037.1| putative PTS system trehalose-s... 190 3e-46
gi|15601411|ref|NP_233042.1| PTS system, sucrose-specific I... 190 3e-46
gi|152978588|ref|YP_001344217.1| PTS system, sucrose-specif... 189 4e-46
gi|49484595|ref|YP_041819.1| PTS system, sucrose-specific I... 189 4e-46
gi|118476313|ref|YP_893464.1| PTS system, trehalose-specifi... 189 4e-46
gi|151939620|gb|EDN58448.1| pts system, sucrose-specific ii... 189 4e-46
gi|116183429|ref|ZP_01473430.1| hypothetical protein VEx2w_... 189 5e-46
gi|12723304|gb|AAK04525.1|AE006280_1 beta-glucoside-specifi... 189 5e-46
gi|153824430|ref|ZP_01977097.1| PTS system, sucrose-specifi... 189 5e-46
gi|156935662|ref|YP_001439578.1| hypothetical protein ESA_0... 189 6e-46
gi|15925367|ref|NP_372901.1| PTS system, sucrose-specific I... 189 7e-46
gi|21284028|ref|NP_647116.1| PTS system sucrose-specific II... 189 7e-46
gi|28377719|ref|NP_784611.1| beta-glucosides PTS, EIIBC [La... 189 7e-46
gi|82751973|ref|YP_417714.1| PTS system sucrose-specific II... 189 7e-46
gi|56420282|ref|YP_147600.1| PTS system, trehalose-specific... 188 8e-46
gi|138895300|ref|YP_001125753.1| PTS system, trehalose-spec... 188 1e-45
gi|153829706|ref|ZP_01982373.1| PTS system, sucrose-specifi... 188 1e-45
gi|15614779|ref|NP_243082.1| PTS system, trehalose-specific... 188 1e-45
gi|56421979|ref|YP_149297.1| PTS system, sucrose-specific e... 187 1e-45
gi|89206150|ref|ZP_01184712.1| PTS system, trehalose-specif... 187 1e-45
gi|83569925|ref|ZP_00921373.1| COG1263: Phosphotransferase ... 187 2e-45
gi|131506|sp|P22825|PTSBC_VIBAL PTS system sucrose-specific... 187 2e-45
gi|152969085|ref|YP_001334194.1| sucrose-specific enzyme II... 186 3e-45
gi|125623321|ref|YP_001031804.1| putative beta-glucosides-s... 186 3e-45
gi|116511289|ref|YP_808505.1| beta-glucoside-specific PTS s... 186 3e-45
gi|117621115|ref|YP_857483.1| pts system, sucrose-specific ... 186 4e-45
gi|157084373|gb|ABV14051.1| hypothetical protein CKO_02945 ... 186 4e-45
gi|124521185|ref|ZP_01696178.1| PTS system, trehalose-speci... 186 4e-45
gi|75241839|ref|ZP_00725658.1| COG1263: Phosphotransferase ... 186 5e-45
gi|46190426|ref|ZP_00121506.2| COG1263: Phosphotransferase ... 184 2e-44
gi|143489|gb|AAA22727.1| enzyme II (sacP) >gi|413973|emb|CA... 183 3e-44
gi|52082301|ref|YP_081092.1| phosphotransferase system (PTS... 183 3e-44
gi|149183356|ref|ZP_01861793.1| SacP [Bacillus sp. SG-1] >g... 183 4e-44
gi|110800828|ref|YP_694995.1| PTS system, trehalose-specifi... 183 4e-44
gi|89099808|ref|ZP_01172681.1| PTS system, trehalose-specif... 182 4e-44
gi|69244441|ref|ZP_00602857.1| Phosphotransferase system PT... 182 5e-44
gi|548636|sp|P08470|PTSBC_SALTY PTS system sucrose-specific... 181 1e-43
gi|18309543|ref|NP_561477.1| PTS system [Clostridium perfri... 181 1e-43
gi|154687928|ref|YP_001423089.1| SacP [Bacillus amyloliquef... 181 1e-43
gi|68056025|ref|ZP_00540161.1| PTS system, sucrose-specific... 181 1e-43
gi|77406602|ref|ZP_00783649.1| PTS system, IIABC components... 181 1e-43
gi|123440921|ref|YP_001004912.1| PTSsystem, sucrose-specifi... 181 2e-43
gi|77972938|ref|ZP_00828493.1| COG1263: Phosphotransferase ... 180 3e-43
gi|116491897|ref|YP_803632.1| beta-glucosides PTS, EIIBC [P... 179 4e-43
gi|145299900|ref|YP_001142741.1| PTS system, sucrose-specif... 179 6e-43
gi|77960676|ref|ZP_00824537.1| COG1263: Phosphotransferase ... 179 8e-43
gi|52784640|ref|YP_090469.1| SacX [Bacillus licheniformis A... 177 2e-42
gi|119944731|ref|YP_942411.1| PTS system, sucrose-specific ... 177 2e-42
gi|77408191|ref|ZP_00784936.1| PTS system, IIBC components ... 177 2e-42
gi|1000451|emb|CAA91014.1| TreP [Bacillus subtilis] 177 3e-42
gi|29376720|ref|NP_815874.1| PTS system, IIBC components [E... 176 4e-42
gi|30018934|ref|NP_830565.1| PTS system, sucrose-specific I... 176 4e-42
gi|149187546|ref|ZP_01865843.1| PTS system, IIabc component... 176 4e-42
gi|11071662|emb|CAC14600.1| enzyme II [Erwinia amylovora] 176 4e-42
gi|77977965|ref|ZP_00833401.1| COG1263: Phosphotransferase ... 176 6e-42
gi|16077847|ref|NP_388661.1| phosphotransferase system (PTS... 175 8e-42
gi|49476900|ref|YP_035013.1| PTS system, sucrose-specific I... 175 1e-41
gi|23466181|ref|NP_696784.1| PtsG [Bifidobacterium longum N... 174 2e-41
gi|77959685|ref|ZP_00823702.1| COG1263: Phosphotransferase ... 174 2e-41
gi|52079274|ref|YP_078065.1| negative regulatory protein of... 174 2e-41
gi|30260901|ref|NP_843278.1| PTS system, sucrose-specific I... 173 3e-41
gi|153815394|ref|ZP_01968062.1| hypothetical protein RUMTOR... 173 3e-41
gi|118476427|ref|YP_893578.1| PTS system, sucrose-specific ... 173 4e-41
gi|149021538|ref|ZP_01835593.1| PTS system, beta-glucosides... 172 5e-41
gi|149125785|ref|ZP_01850772.1| PTS system, sucrose-specifi... 172 5e-41
gi|153832631|ref|ZP_01985298.1| PTS system, IIabc component... 171 2e-40
gi|124516857|emb|CAJ20039.1| FruA protein [Bifidobacterium ... 170 3e-40
gi|89096571|ref|ZP_01169463.1| hypothetical protein B14911_... 170 3e-40
gi|18310516|ref|NP_562450.1| probable PTS system [Clostridi... 169 5e-40
gi|56963035|ref|YP_174762.1| PTS system, trehalose-specific... 169 5e-40
gi|149021537|ref|ZP_01835592.1| PTS system, beta-glucosides... 169 5e-40
gi|52079230|ref|YP_078021.1| phosphotransferase system (PTS... 169 6e-40
gi|50119321|ref|YP_048488.1| PTS system, sucrose-specific I... 169 6e-40
gi|110799103|ref|YP_696221.1| PTS system, sucrose-specific ... 169 6e-40
gi|118066881|ref|ZP_01535139.1| PTS system, sucrose-specifi... 169 8e-40
gi|117618690|ref|YP_858267.1| pts system, trehalose-specifi... 168 1e-39
gi|26554416|ref|NP_758350.1| PTS system sucrose-specific II... 168 1e-39
gi|145297563|ref|YP_001140404.1| PTS system, trehalose-spec... 167 2e-39
gi|4091870|gb|AAC99320.1| sucrose-specific PTS permease [Cl... 167 2e-39
gi|148974188|ref|ZP_01811721.1| PTS system, IIabc component... 167 2e-39
gi|110801553|ref|YP_698831.1| PTS system, sucrose-specific ... 167 2e-39
gi|149182107|ref|ZP_01860591.1| PTS system, trehalose-speci... 167 3e-39
gi|150019820|ref|YP_001312074.1| PTS system, sucrose-specif... 166 3e-39
gi|69248193|ref|ZP_00604667.1| PTS system, glucose-like IIB... 166 4e-39
gi|68054301|ref|ZP_00538465.1| PTS system, trehalose-specif... 166 5e-39
gi|47926|emb|CAA68605.1| unnamed protein product [Salmonell... 166 5e-39
gi|153939461|ref|YP_001391311.1| PTS system, trehalose-spec... 166 6e-39
gi|148379949|ref|YP_001254490.1| PTS system, trehalose-spec... 166 6e-39
gi|153174337|ref|ZP_01929865.1| PTS system, trehalose-speci... 166 6e-39
gi|16803295|ref|NP_464780.1| hypothetical protein lmo1255 [... 164 1e-38
gi|116872690|ref|YP_849471.1| PTS system, trehalose-specifi... 164 1e-38
gi|16800292|ref|NP_470560.1| hypothetical protein lin1223 [... 164 2e-38
gi|46907481|ref|YP_013870.1| PTS system, trehalose-specific... 164 2e-38
gi|34498755|ref|NP_902970.1| protein-N p-phosphohistidine-s... 163 4e-38
gi|154685251|ref|YP_001420412.1| TreP [Bacillus amyloliquef... 163 4e-38
gi|84386561|ref|ZP_00989588.1| PTS system, IIabc component ... 162 8e-38
gi|15923464|ref|NP_370998.1| phosphoenolpyruvate-dependent ... 161 1e-37
gi|149003927|ref|ZP_01828741.1| trehalose PTS system, IIABC... 161 1e-37
gi|17549504|ref|NP_522844.1| PROBABLE PTS SYSTEM, SUCROSE-S... 160 2e-37
gi|150017182|ref|YP_001309436.1| PTS system, trehalose-spec... 160 2e-37
gi|21282157|ref|NP_645245.1| PTS enzyme II [Staphylococcus ... 160 2e-37
gi|151220650|ref|YP_001331472.1| PTS system, trehalose-spec... 160 3e-37
gi|150018591|ref|YP_001310845.1| PTS system, glucose-like I... 160 3e-37
gi|148266932|ref|YP_001245875.1| PTS system, trehalose-spec... 160 3e-37
gi|57651355|ref|YP_185404.1| PTS system, IIBC components [S... 160 3e-37
gi|56963218|ref|YP_174949.1| PTS system, sucrose-specific e... 158 1e-36
gi|149192183|ref|ZP_01870401.1| fused trehalose(maltose)-sp... 158 1e-36
gi|119944295|ref|YP_941975.1| PTS system, trehalose-specifi... 157 2e-36
gi|50365128|ref|YP_053553.1| beta-glucoside PTS system IIAB... 157 2e-36
gi|55822484|ref|YP_140925.1| beta-glucoside-specific PTS sy... 157 2e-36
gi|90579075|ref|ZP_01234885.1| PTS system, glucose-specific... 156 5e-36
gi|25028014|ref|NP_738068.1| PTS glucose-specific IIABC [Co... 155 8e-36
gi|50812175|ref|NP_388049.2| hypothetical protein BSU01680 ... 155 9e-36
gi|15616136|ref|NP_244441.1| PTS system, sucrose phosphotra... 154 1e-35
gi|49482698|ref|YP_039922.1| sugar-specific PTS transport s... 154 1e-35
gi|82750181|ref|YP_415922.1| PTS system trehalose-specific ... 154 2e-35
gi|121308580|dbj|BAF43678.1| glucose-specific enzyme II of ... 154 2e-35
gi|153839018|ref|ZP_01991685.1| pts system, trehalose-speci... 154 2e-35
gi|153835059|ref|ZP_01987726.1| pts system, trehalose-speci... 154 3e-35
gi|156973514|ref|YP_001444421.1| hypothetical protein VIBHA... 153 4e-35
gi|116184008|ref|ZP_01473963.1| hypothetical protein VEx2w_... 153 4e-35
gi|68053656|ref|ZP_00537821.1| IMP dehydrogenase/GMP reduct... 152 7e-35
gi|52425292|ref|YP_088429.1| PtsG protein [Mannheimia succi... 151 1e-34
gi|28897484|ref|NP_797089.1| PTS system, trehalose-specific... 151 1e-34
gi|90413289|ref|ZP_01221283.1| putative PTS system, trehalo... 151 1e-34
gi|123443955|ref|YP_001007925.1| PTS system, trehalose-spec... 151 1e-34
gi|55820593|ref|YP_139035.1| beta-glucoside PTS system comp... 151 1e-34
gi|16080892|ref|NP_391720.1| negative regulatory protein of... 150 2e-34
gi|89074519|ref|ZP_01160991.1| PTS system, glucose-specific... 150 3e-34
gi|52078660|ref|YP_077451.1| Phosphotransferase system PTS,... 150 3e-34
gi|91228723|ref|ZP_01262635.1| PTS system, trehalose-specif... 150 3e-34
gi|139436999|ref|ZP_01771159.1| Hypothetical protein COLAER... 150 3e-34
gi|27363767|ref|NP_759295.1| PTS system, trehalose-specific... 149 4e-34
>gi|125717248|ref|YP_001034381.1| PTS system, beta-glucoside-specific EII component, putative
[Streptococcus sanguinis SK36]
gi|125497165|gb|ABN43831.1| PTS system, beta-glucoside-specific EII component, putative
[Streptococcus sanguinis SK36]
Length = 643
Score = 1178 bits (3048), Expect = 0.0, Method: Composition-based stats.
Identities = 643/643 (100%), Positives = 643/643 (100%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG
Sbjct: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL 120
GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL
Sbjct: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL 120
Query: 121 SAAGMIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
SAAGMIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA
Sbjct: 121 SAAGMIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV
Sbjct: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF
Sbjct: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAICFAQAGALLNIMM 360
SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAICFAQAGALLNIMM
Sbjct: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAICFAQAGALLNIMM 360
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ
Sbjct: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES
Sbjct: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG
Sbjct: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID
Sbjct: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK
Sbjct: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
>gi|24379420|ref|NP_721375.1| putative PTS system, beta-glucoside-specific EII component
[Streptococcus mutans UA159]
gi|24377352|gb|AAN58681.1|AE014937_7 putative PTS system, beta-glucoside-specific EII component
[Streptococcus mutans UA159]
Length = 644
Score = 900 bits (2327), Expect = 0.0, Method: Composition-based stats.
Identities = 483/640 (75%), Positives = 555/640 (86%), Gaps = 1/640 (0%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MAKDYTELA+DIV+HVGGKDNI KLVHCVTRLRF+LKDESKAD DYL +R+G+VTVVKAG
Sbjct: 1 MAKDYTELAQDIVSHVGGKDNIVKLVHCVTRLRFTLKDESKADDDYLKQREGIVTVVKAG 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADD-DAVEGNLFDRFIALVSGLFQPMLGT 119
GQYQVVIGNHVPDVY+TVLKV+GI+GEG +D D+ D +GNLFDRFIALVSGLFQPMLG
Sbjct: 61 GQYQVVIGNHVPDVYDTVLKVSGITGEGGIDVDEGDIPKGNLFDRFIALVSGLFQPMLGA 120
Query: 120 LSAAGMIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
LSAAGMIKG+VAI+AA+GV+KTDGAYVVLNAAGDG FQFLPLILA+TAAKRFKM QFTAL
Sbjct: 121 LSAAGMIKGLVAILAAVGVSKTDGAYVVLNAAGDGFFQFLPLILALTAAKRFKMEQFTAL 180
Query: 180 AIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAA 239
AIGFALVYPNIAASFT + PLYTLF GT IESPI+STFFG+PIIFPASSYL TVLP++ A
Sbjct: 181 AIGFALVYPNIAASFTVKHPLYTLFQGTLIESPIYSTFFGIPIIFPASSYLQTVLPIVVA 240
Query: 240 VWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD 299
+WAG+KIE FKKIIPDVVKVF+VPFFT+LITVPL+FLVIGPVMSWASDLVGA+FTGIY
Sbjct: 241 IWAGSKIETFFKKIIPDVVKVFVVPFFTILITVPLSFLVIGPVMSWASDLVGAIFTGIYG 300
Query: 300 FSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAICFAQAGALLNIM 359
F+PV+YGIVLGA WQVLVMFGLHWGLVPLAILELQKGPGVILVA+IAICFAQAG+LLNIM
Sbjct: 301 FNPVIYGIVLGAMWQVLVMFGLHWGLVPLAILELQKGPGVILVATIAICFAQAGSLLNIM 360
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
MRTKE KVRQLSIPAFISALFGVTEPAIYGITLPMR+PFIMTC+SGA++GAYLA F+VKM
Sbjct: 361 MRTKENKVRQLSIPAFISALFGVTEPAIYGITLPMRVPFIMTCVSGAISGAYLALFNVKM 420
Query: 420 QVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
QVMGGMGLFAIPSFI+ NSM LIHFLIAI NFVLGF LTQ IKIP L+G P+ D+
Sbjct: 421 QVMGGMGLFAIPSFIDPKNSMILIHFLIAIAMNFVLGFVLTQFIKIPYLYGEPTSTDSDV 480
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
E + I +++++SPL G+VV LE+ PD VFASGAMGKG+AI+P G VVAP
Sbjct: 481 DDKEEPVKELKEIKQEIISSPLIGKVVKLENVPDEVFASGAMGKGIAIDPDDGIVVAPTK 540
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + L+FPT HA+GL T++GAE+LIH+GMDTV+L GKGF + V G V+ GQ LL FD+
Sbjct: 541 GEVTLVFPTKHAVGLRTENGAEILIHIGMDTVSLAGKGFKSFVKVGDHVEAGQTLLEFDV 600
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
+ IK AG PV TP+IVTN+ ++ + + ++ G+ LL
Sbjct: 601 NAIKAAGLPVITPVIVTNSDQFEDVLTTQERTVEAGDYLL 640
>gi|9622919|gb|AAF89975.1|AF206272_1 beta-glucoside-specific EII permease [Streptococcus mutans]
Length = 644
Score = 894 bits (2309), Expect = 0.0, Method: Composition-based stats.
Identities = 481/640 (75%), Positives = 552/640 (86%), Gaps = 1/640 (0%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MAKDYTELA+DIV+HVGGKD I KLVHCVTRLRF+LKDESKAD DYL +R+G+VTVVKAG
Sbjct: 1 MAKDYTELAQDIVSHVGGKDFIDKLVHCVTRLRFTLKDESKADDDYLKQREGIVTVVKAG 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADD-DAVEGNLFDRFIALVSGLFQPMLGT 119
GQYQVVIGNHVPDVY+TVLKV+GI+GEG +D D+ D +GNLFDRFIALVSGLFQPMLG
Sbjct: 61 GQYQVVIGNHVPDVYDTVLKVSGITGEGGIDVDEGDIPKGNLFDRFIALVSGLFQPMLGA 120
Query: 120 LSAAGMIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
LSAAGMIKG+VAI+AA+GV+KTDGAYVVLNAAGDG FQFLPLILA+TAAKRFKM QFTAL
Sbjct: 121 LSAAGMIKGLVAILAAVGVSKTDGAYVVLNAAGDGFFQFLPLILALTAAKRFKMEQFTAL 180
Query: 180 AIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAA 239
AIGFALVYPNIAASFT + PLYTLF GT I SPI+STFFG+PIIFPASSYL TVLP++ A
Sbjct: 181 AIGFALVYPNIAASFTVKHPLYTLFQGTLIVSPIYSTFFGIPIIFPASSYLQTVLPIVVA 240
Query: 240 VWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD 299
+WAG+KIE FKKIIPDVVKVF+VPFFT+LITVPL+FLVIGPVMSWASDLVGA+FTGIY
Sbjct: 241 IWAGSKIETFFKKIIPDVVKVFVVPFFTILITVPLSFLVIGPVMSWASDLVGAIFTGIYG 300
Query: 300 FSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAICFAQAGALLNIM 359
F+PV+YGIVLGA WQVLVMFGLHWGLVPLAILELQKGPGVILVA+IAICFAQAG+LLNIM
Sbjct: 301 FNPVIYGIVLGAMWQVLVMFGLHWGLVPLAILELQKGPGVILVATIAICFAQAGSLLNIM 360
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
MRT E KVRQLSIPAFISALFGVTEPAIYGITLPMR+PFIMTC+SGA++GAYLA F+VKM
Sbjct: 361 MRTNENKVRQLSIPAFISALFGVTEPAIYGITLPMRVPFIMTCVSGAISGAYLALFNVKM 420
Query: 420 QVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
QVMGGMGLFAIPSFI+ NSM LIHFLIAI NFVLGF LTQ IKIP L+G P+ D+
Sbjct: 421 QVMGGMGLFAIPSFIDPKNSMILIHFLIAIAMNFVLGFVLTQFIKIPYLYGEPTSTDSDV 480
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
E + I +++++SPL G+VV LE+ PD VFASGAMGKG+AI+P G VVAP
Sbjct: 481 DDKEEPVKELKEIKQEIISSPLIGKVVKLENVPDEVFASGAMGKGIAIDPDDGIVVAPTK 540
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + L+FPT HA+GL T++GAE+LIH+GMDTV+L GKGF + V G V+ GQ LL FD+
Sbjct: 541 GEVTLVFPTKHAVGLRTENGAEILIHIGMDTVSLAGKGFKSFVEVGDHVEAGQTLLEFDV 600
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
+ IK AG PV TP+IVTN+ ++ + + ++ GN LL
Sbjct: 601 NAIKAAGLPVITPVIVTNSDQFEDVLTTQERTVEAGNYLL 640
>gi|157076047|gb|ABV10730.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
gordonii str. Challis substr. CH1]
Length = 629
Score = 740 bits (1911), Expect = 0.0, Method: Composition-based stats.
Identities = 408/646 (63%), Positives = 496/646 (76%), Gaps = 23/646 (3%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLM+RDGVVT+VKAG
Sbjct: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMERDGVVTIVKAG 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADD-DAVEGNLFDRFIALVSGLFQPMLGT 119
GQYQVVIGNHVPDVY VL V G+ G G+VDAD+ D ++ N D FI +VS +FQP LG
Sbjct: 61 GQYQVVIGNHVPDVYAAVLAVGGLQGAGAVDADEEDGIKKNPLDAFIDIVSSIFQPFLGP 120
Query: 120 LSAAGMIKGVVAIMAA-LG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFT 177
L+AAG+IKG+VAI+ A LG A +G +VL AAGDG FQFLP+++A+ AA++FKMN FT
Sbjct: 121 LAAAGIIKGIVAILTAFLGWTAANNGVALVLTAAGDGFFQFLPMMIAVNAARKFKMNDFT 180
Query: 178 ALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVI 237
ALAI ALVYPN+ S TA AG + FFG+P+ P YLSTV+P I
Sbjct: 181 ALAIAAALVYPNLETSVTALGE-----AGA-------ANFFGIPLSMPTGGYLSTVIPAI 228
Query: 238 AAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGI 297
AVW + IEK +K+ PD VK+F+VPF TL+++VPL FL++GP+ + AS+L+G+ T +
Sbjct: 229 LAVWVASHIEKFMRKVTPDTVKLFVVPFVTLVVSVPLTFLLVGPIANGASNLLGSFLTAV 288
Query: 298 YDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALL 356
+ F+PV+YG++LGA WQV+VMFGLHWGLVPLAILEL QKG GVIL A+I CF Q G L
Sbjct: 289 HGFNPVVYGLLLGALWQVMVMFGLHWGLVPLAILELTQKGAGVILGAAILPCFTQTGVLA 348
Query: 357 NIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFD 416
I ++TKEEKV+ +++PA IS++FGVTEPAIYG+TLPMR PFI++CI + GA++ FF+
Sbjct: 349 AIYLKTKEEKVKAITMPALISSIFGVTEPAIYGVTLPMRTPFIISCIVSGIVGAFVGFFN 408
Query: 417 VKMQVMGGMGLFAIPSFIEAS-NSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEK 475
+ M +G +G+F PS + N M++ I VL F + + IP L+ K
Sbjct: 409 MTMYSVGALGIFVYPSLVSPDGNFMSMYVAFIGTGLAIVLSFAIQMFVPIPTLYAKKENK 468
Query: 476 DAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVV 535
E + E+ EQV+ SP+AG+V+ L DTPDAVFASGAMGKGVAIEPSVGEVV
Sbjct: 469 AVVEEGEKASEK------EQVLVSPIAGKVIPLSDTPDAVFASGAMGKGVAIEPSVGEVV 522
Query: 536 APADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLL 595
APADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLL
Sbjct: 523 APADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLL 582
Query: 596 SFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
SFDID IKEAGYPVTTPIIVTN + ++ ++VLA+GE+ LG+ L EL
Sbjct: 583 SFDIDAIKEAGYPVTTPIIVTNMSRFRDLKVLAEGEVDLGDTLFEL 628
>gi|81096853|ref|ZP_00875181.1| Sugar-specific permease, EIIA 1 domain:PTS system,
beta-glucoside-specific IIABC component [Streptococcus
suis 89/1591]
gi|80977113|gb|EAP40668.1| Sugar-specific permease, EIIA 1 domain:PTS system,
beta-glucoside-specific IIABC component [Streptococcus
suis 89/1591]
Length = 651
Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats.
Identities = 371/651 (56%), Positives = 474/651 (72%), Gaps = 23/651 (3%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MAKDYT+LA DIVAHVGGK+NI+ L HCVTRLRF LKDESKADTDYL RDGVVTVV+AG
Sbjct: 16 MAKDYTDLATDIVAHVGGKENISSLKHCVTRLRFGLKDESKADTDYLKARDGVVTVVQAG 75
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADD-DAVEGNLFDRFIALVSGLFQPMLGT 119
GQYQVVIGNHVPDVY V KVAGISG+G++D D+ D +GNLFDRF+ LVSG+FQP LG
Sbjct: 76 GQYQVVIGNHVPDVYVAVQKVAGISGDGALDIDEGDGPKGNLFDRFVDLVSGVFQPSLGV 135
Query: 120 LSAAGMIKGVVAIMAA-LGVAKTDGA-YVVLNAAGDGLFQFLPLILAITAAKRFKMNQFT 177
L+AAG+IKG+V+I+AA +G+ + A Y +LN AGDG FQFLP++LA AA++F+MN+FT
Sbjct: 136 LAAAGIIKGLVSILAATMGLNNDNSALYAILNTAGDGFFQFLPIVLAFNAARKFRMNEFT 195
Query: 178 ALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPAS-SYLSTVLPV 236
+AI ALVYP + +F K AG + FG+P + PA+ SYL TV+PV
Sbjct: 196 GMAIAMALVYPTLPGTFATLKE-----AG-------LNNVFGIPFVLPAAGSYLQTVMPV 243
Query: 237 IAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTG 296
+ AVW + IEK KKI DVVKVFIVPF T+LI+VPL FLV+GPV ++ASDL+ A FT
Sbjct: 244 LLAVWIASHIEKFMKKITLDVVKVFIVPFVTILISVPLTFLVVGPVANYASDLLSAGFTA 303
Query: 297 IYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGAL 355
+ FSP+LYGI+LGA WQV+VMFGLHW LVPLAIL+ Q G IL+A+ F Q G L
Sbjct: 304 VMGFSPLLYGILLGALWQVMVMFGLHWALVPLAILQFSQNGWSNILLAAALPNFTQTGVL 363
Query: 356 LNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFF 415
L IMM+TKE KV+ +++PAFIS++FGVTEPAIYG+TLPM+ PF ++C A+ GA L+FF
Sbjct: 364 LAIMMKTKESKVKSVAMPAFISSIFGVTEPAIYGVTLPMKTPFYISCAVSAVIGAGLSFF 423
Query: 416 DVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAI-VANFVLGFGLTQLIKIPNLFGGPSE 474
D+K MG +G+F P ++ +T + ++ +A V F + + +P L+G P+E
Sbjct: 424 DLKNYAMGALGIFMYPGYVSPELGVTPMWIMMGFSLAAIVASFAIQMALPVPYLYGEPTE 483
Query: 475 KDAAESLDSEKERVS--AGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVG 532
K +S++ KE V I ++++ SPL G+VV LED PDAVFASGAMGKG+AI+P G
Sbjct: 484 K---KSVEETKESVPELKEIKQEIIASPLIGKVVKLEDVPDAVFASGAMGKGIAIDPLDG 540
Query: 533 EVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQ 592
+V+PA I L+FPT HAIGL T++GAELLIH+GMDTV+L GKGF + V G +V+ GQ
Sbjct: 541 ILVSPAKAEITLVFPTKHAIGLRTENGAELLIHIGMDTVSLAGKGFESFVQVGDQVEAGQ 600
Query: 593 LLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
LL FD+ IK A PV TPIIVTNTA+Y+ I V + +I G+ LL K
Sbjct: 601 KLLEFDLHQIKAADLPVITPIIVTNTADYEDILVTQESQINSGDYLLTTVK 651
>gi|16799105|ref|NP_469373.1| hypothetical protein lin0026 [Listeria innocua Clip11262]
gi|16412447|emb|CAC95259.1| lin0026 [Listeria innocua]
Length = 633
Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats.
Identities = 334/641 (52%), Positives = 449/641 (70%), Gaps = 16/641 (2%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +LAKDI+ +VGGK+NI + HC+TRLRF LKDE+ A+T + K DGV++V+K+GGQYQ
Sbjct: 3 YEQLAKDILKNVGGKENINSVFHCITRLRFKLKDENIANTKEIEKLDGVISVIKSGGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHVPDV++ VL+V GIS EG D + GN+F+RFI ++SG+F P+LG L+A G
Sbjct: 63 VVIGNHVPDVFKAVLEVGGISAEG--DDSNVPASGNIFNRFIDMISGVFTPVLGVLAATG 120
Query: 125 MIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
MIKG A+ AA G + T G Y +L A GD LF F P+ L TA K+F N F +AIG
Sbjct: 121 MIKGFTAMFAAFGWITVTSGTYQLLYAIGDCLFYFFPIFLGFTAMKKFGGNIFIGMAIGG 180
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
ALVYP +A +A P+YTLFAGT ESPI TF G+P+I SY S+V+P+I A + G
Sbjct: 181 ALVYPTLAG-ISAGDPIYTLFAGTIFESPIHVTFLGIPVIL--MSYASSVIPIILATYFG 237
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
+K+EKGFKKIIPDV+K F+VPF TLL+ VP+ FLVIGP+ +WA L+GA +Y+ SPV
Sbjct: 238 SKVEKGFKKIIPDVIKTFVVPFCTLLVVVPITFLVIGPIATWAGQLLGAGTIWVYNLSPV 297
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRT 362
+ G++LG WQV V+FGLHWGL+P+AI L G +L FAQ GA+L + +T
Sbjct: 298 VAGLILGGFWQVFVIFGLHWGLIPVAINNLTTLGSDPVLAMMFGASFAQIGAVLAVFFKT 357
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
+ +K++ LSIPAFIS +FGVTEPAIYG+TLP++ PFIM+CI+GA+ G + F K+ +M
Sbjct: 358 RNKKIKSLSIPAFISGIFGVTEPAIYGVTLPLKKPFIMSCIAGAVGGGIIGFVSAKVYIM 417
Query: 423 GGMGLFAIPSFIEASNSMTLIHF--LIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
GG+G+F +P+F + +T + +IAIV +F+LGF LT + F P+E E+
Sbjct: 418 GGLGIFGLPNFFQPGAGITSAFWWVVIAIVISFILGFILTYVAG----FKDPAEAVVEET 473
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+E E + I + + +P+ GE+V L D D F+SGA+GKGVAI P+VG VVAPA G
Sbjct: 474 NVTEGETL---IERETIPAPVVGEIVTLADVKDEAFSSGALGKGVAIIPTVGRVVAPAAG 530
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
+ +FPT HAIG+ T+DGAE+LIH+GMDTV L+GK FTAHV QG ++KGQLL FDI+
Sbjct: 531 TVTTIFPTGHAIGITTNDGAEVLIHIGMDTVQLEGKFFTAHVKQGDVIEKGQLLTEFDIE 590
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
IK AGY VTTP++VTN+ Y + + E +L +L+ L
Sbjct: 591 GIKAAGYDVTTPVVVTNSNQYLDVMITDAKEAKLEERLITL 631
>gi|116871452|ref|YP_848233.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116740330|emb|CAK19448.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 634
Score = 590 bits (1522), Expect = e-167, Method: Composition-based stats.
Identities = 333/643 (51%), Positives = 448/643 (69%), Gaps = 19/643 (2%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +LAKDI+ +VGGK+NI + HC+TRLRF LKDE+ A+T + K DGV++V+K+GGQYQ
Sbjct: 3 YEQLAKDILKNVGGKENINSVFHCITRLRFKLKDENIANTKEIEKLDGVISVIKSGGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHVPDV++ VL+V GIS EG + A GN+F+RFI ++SG+F P+LG L+A G
Sbjct: 63 VVIGNHVPDVFKAVLEVGGISAEGDEGSSAPAT-GNIFNRFIDMISGVFTPVLGVLAATG 121
Query: 125 MIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
MIKG A+ A G + +T G Y++L A GD LF F P+ L TA K+F N F +AIG
Sbjct: 122 MIKGFAAMFLAFGWLTETSGTYILLYAIGDCLFYFFPIFLGYTAMKKFGGNVFIGMAIGA 181
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
ALVYP +A +A KP++TLFAGT ESPI TF G+P+I +Y S+V+P+I A + G
Sbjct: 182 ALVYPTLAG-ISAGKPIFTLFAGTVFESPIHITFLGIPVIL--MNYASSVIPIILATYFG 238
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
+K+EKGFKKIIPDV+K F+VPF TLL+ VP+ FL+IGP+ +WA L+GA +Y+ SPV
Sbjct: 239 SKVEKGFKKIIPDVIKTFVVPFCTLLVVVPITFLLIGPIATWAGQLLGAGTIWVYNLSPV 298
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAI---LELQKGPGVILVASIAICFAQAGALLNIMM 360
+ G++LG WQV V+FGLHWGLVP+AI L P IL + FAQ GA+L +
Sbjct: 299 IAGLILGGFWQVFVIFGLHWGLVPVAINNLASLHHDP--ILAMTFGASFAQIGAVLAVFF 356
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
+T+ K++ LSIPAFIS +FGVTEPAIYG+TLP++ PFIM+CI+G + G + F +
Sbjct: 357 KTRNTKIKALSIPAFISGIFGVTEPAIYGVTLPLKKPFIMSCIAGGIGGGIIGFAGSQTY 416
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHF--LIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
+MGG+G+F +P+F + +T + +IAIV +F+LGF LT ++ F P+E
Sbjct: 417 IMGGLGIFGLPNFFKPGEGITGAFWWVVIAIVISFILGFILTYVVG----FKDPAEAVVE 472
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
ES E E + I + + +P+ GE+V L D D F+SGA+GKGVAI PSVG VVAPA
Sbjct: 473 ESNTVEGETL---IERETIPAPVVGEIVTLADVKDEAFSSGALGKGVAIIPSVGRVVAPA 529
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
G + +FPT HAIG+ T+DGAE+LIH+GMDTV L+GK FTAHV QG + KGQLL FD
Sbjct: 530 AGTVTTIFPTGHAIGITTNDGAEVLIHIGMDTVQLEGKFFTAHVKQGDTITKGQLLTEFD 589
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
I+ IK AGY VTTP++VTN+ Y + + E +L +L+ L
Sbjct: 590 IEGIKAAGYDVTTPVVVTNSNQYLDVMITDAKEAKLEERLITL 632
>gi|16802075|ref|NP_463560.1| hypothetical protein lmo0027 [Listeria monocytogenes EGD-e]
gi|46906253|ref|YP_012642.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 4b F2365]
gi|47093042|ref|ZP_00230821.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 4b H7858]
gi|47095088|ref|ZP_00232700.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 1/2a F6854]
gi|153176190|ref|ZP_01931449.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes FSL N3-165]
gi|153184380|ref|ZP_01935139.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes J0161]
gi|153192667|ref|ZP_01939627.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes J2818]
gi|153197994|ref|ZP_01942164.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes 10403S]
gi|153200413|ref|ZP_01942575.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes HPB2262]
gi|16409386|emb|CAC98242.1| lmo0027 [Listeria monocytogenes]
gi|46879517|gb|AAT02819.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 4b F2365]
gi|47016433|gb|EAL07354.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 1/2a F6854]
gi|47018610|gb|EAL09364.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 4b H7858]
gi|126942883|gb|EBA20617.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes J0161]
gi|127632330|gb|EBA22012.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes 10403S]
gi|127763704|gb|EBA24538.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes J2818]
gi|133728903|gb|EBA30601.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes FSL N3-165]
gi|133736691|gb|EBA38389.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes HPB2262]
Length = 634
Score = 587 bits (1513), Expect = e-166, Method: Composition-based stats.
Identities = 331/641 (51%), Positives = 446/641 (69%), Gaps = 15/641 (2%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +LAKDI+ +VGGK+NI + HC+TRLRF LKDE+ A+T + K DGV++V+K+GGQYQ
Sbjct: 3 YEQLAKDILKNVGGKENINSVFHCITRLRFKLKDENIANTKEIEKLDGVISVIKSGGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHVPDV++ VL+V GIS EG + A GN+F+RFI ++SG+F P+LG L+A G
Sbjct: 63 VVIGNHVPDVFKAVLEVGGISAEGDEGSSAPAT-GNIFNRFIDMISGVFTPVLGVLAATG 121
Query: 125 MIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
MIKG A+ A G + T G Y +L A GD LF F P+ L TA K+F N F +AIG
Sbjct: 122 MIKGFTAMFVAFGWITVTSGTYQLLYAIGDCLFYFFPIFLGYTAMKKFGGNIFIGMAIGG 181
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
ALVYP +A TA PLYTLFAGT ESPI TF G+P+I SY S+V+P+I A + G
Sbjct: 182 ALVYPTLAG-ITAGDPLYTLFAGTIFESPIHVTFLGIPVIL--MSYASSVIPIIVATYFG 238
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
+K+EKGFKKIIPDV+K F+VPF TLLI VP+ F+VIGP+ +WA L+GA +Y+ SP+
Sbjct: 239 SKVEKGFKKIIPDVIKTFVVPFCTLLIVVPITFIVIGPIATWAGQLLGAGTIWVYNLSPI 298
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRT 362
+ G++LG WQV V+FGLHWGLVP+AI L G IL + FAQ GA+L + ++
Sbjct: 299 IAGLILGGFWQVFVIFGLHWGLVPVAINNLTVLGHDPILAMTFGASFAQIGAVLAVFFKS 358
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
+ +K++ LSIPAFIS +FGVTEPAIYG+TLP++ PFIM+CI+G + G + F + +M
Sbjct: 359 RNKKIKSLSIPAFISGIFGVTEPAIYGVTLPLKKPFIMSCIAGGIGGGIIGFAGSQTYIM 418
Query: 423 GGMGLFAIPSFIEASNSMT--LIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
GG+G+F +P+F + + ++ +IAIV +F+LGF LT ++ F P++ +S
Sbjct: 419 GGLGIFGLPNFFKPGSGISGEFWWVVIAIVISFILGFILTYVVG----FKDPADVVVEQS 474
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
E E + I + + +P+ GE+V L D D F+SGA+GKGVAI P+VG VVAPA G
Sbjct: 475 NTVEGETL---IERETIPAPVVGEIVTLADVKDEAFSSGALGKGVAIIPTVGRVVAPAAG 531
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
+ +FPT HAIG+ T DGAE+LIH+GMDTV L+GK FTAHV QG ++KGQLL FDI+
Sbjct: 532 TVTTIFPTGHAIGITTKDGAEVLIHIGMDTVQLEGKFFTAHVKQGDVIEKGQLLTEFDIE 591
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
IK AGY VTTP++VTN+ Y + + E +L +L+ L
Sbjct: 592 GIKAAGYDVTTPVVVTNSNQYLDVMITDAKEAKLEERLITL 632
>gi|1100076|gb|AAC05713.1| PTS-dependent enzyme II [Clostridium longisporum]
Length = 616
Score = 587 bits (1512), Expect = e-165, Method: Composition-based stats.
Identities = 316/638 (49%), Positives = 439/638 (68%), Gaps = 31/638 (4%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +LAKDI+ +VGGK+N+ L HC+TRLRF LKDE KA+TD L DGVVTVVK+GGQYQ
Sbjct: 3 YEQLAKDILKNVGGKENVNSLTHCITRLRFKLKDEGKANTDILKNMDGVVTVVKSGGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHVPDV+ V V G+ +G+ + D+ + N ++FI +VSG+FQP+LG L A G
Sbjct: 63 VVIGNHVPDVFAAVNAVGGL--QGASEEDETEEKMNPLNKFIDIVSGVFQPILGVLCATG 120
Query: 125 MIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
MIKG+ A++ A GV A TD Y++LNA GD LF F P+ L TAAK+FK+NQFT +A+G
Sbjct: 121 MIKGLNAVLVAAGVLASTDSTYIILNAIGDCLFNFFPIFLGFTAAKKFKLNQFTGMAVGA 180
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
A+VYP I T FAG ++ FFG+P++ P+SSY STV+P+I A++
Sbjct: 181 AMVYPAI-----------TSFAGQTVD------FFGIPVVMPSSSYQSTVIPIILAIYIA 223
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
+K+EK FKKIIPD+VK F+VPF TLL+ VP+ F+ IGP+ + A++ +G L IY+F+P
Sbjct: 224 SKVEKLFKKIIPDMVKTFLVPFATLLVVVPVTFMAIGPISTIAANALGDLTLAIYNFNPT 283
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRT 362
+ G+ +G WQV VMFGLHWGLVP+A+ L G +L S+A+CFAQ G ++ I+ +T
Sbjct: 284 IAGLFIGGFWQVFVMFGLHWGLVPIAMNNLAVIGYDPVLATSVAVCFAQTGVVMAILAKT 343
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
K++K++ L IPA IS FGVTEPAIYGITLP + PFI++CI+ +TG + FF+ K M
Sbjct: 344 KDKKLKSLCIPAIISGFFGVTEPAIYGITLPRKKPFILSCIAAGVTGGIIGFFESKGYSM 403
Query: 423 GGMGLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
GG+G+FA+PS+I +IA+VA V+GF L + K+ D E
Sbjct: 404 GGLGIFALPSYINPEGIDRGFYGMVIAMVAGIVVGFILMFVTKL---------NDEEEVK 454
Query: 482 DSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGV 541
+E ++ + + ++ + SP+ GEVV L + D F+SGA+GKGVAI P G+V APADG
Sbjct: 455 TTESKKEESLVKQEEIVSPIQGEVVTLAEVKDEAFSSGALGKGVAINPIEGKVYAPADGT 514
Query: 542 IRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDT 601
+ LFP+ HA+G+ T++GAE+LIHVGMDTV L+GK FTA V QG K+KKGQLL+ FD +
Sbjct: 515 LTTLFPSLHALGITTENGAEILIHVGMDTVQLEGKHFTAKVKQGDKIKKGQLLIEFDKEA 574
Query: 602 IKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
I++AGY TP+++TN+ Y + K ++ + ++LL
Sbjct: 575 IEKAGYSTITPVLITNSDQYLDVIETDKRKVDVNSELL 612
>gi|150018104|ref|YP_001310358.1| PTS system, beta-glucoside-specific IIABC subunit [Clostridium
beijerinckii NCIMB 8052]
gi|149904569|gb|ABR35402.1| PTS system, beta-glucoside-specific IIABC subunit [Clostridium
beijerinckii NCIMB 8052]
Length = 634
Score = 581 bits (1497), Expect = e-164, Method: Composition-based stats.
Identities = 321/627 (51%), Positives = 431/627 (68%), Gaps = 27/627 (4%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +LAKDI+ +VGGK+N+ L HC+TRLRF LKDESKA+T+ L DGVVTVVK+GGQYQ
Sbjct: 3 YEQLAKDIIKNVGGKENVNSLTHCITRLRFKLKDESKANTEVLKNMDGVVTVVKSGGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHVPDV+ V+ + G S D ++ + + F+RFI VSG+F P+LG L+A G
Sbjct: 63 VVIGNHVPDVFADVVAIGGFKTGASEDVSEEKM--SPFNRFIDTVSGVFTPILGVLAATG 120
Query: 125 MIKGVVAIMAALGVAKT-DGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
MIKG A+ AL + T DG Y +LNA GD LF F P+ L TAA +FK+N+F +AIG
Sbjct: 121 MIKGFNALFIALHILNTTDGTYQILNATGDCLFNFFPIFLGYTAANKFKVNKFIGMAIGA 180
Query: 184 ALVYPNIAA-SFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
ALVYP++A + +PLYTLFAG+ IESP++ TF G+P+I SY S+V+P+I A +
Sbjct: 181 ALVYPSLAGLTAPPAQPLYTLFAGSIIESPVYITFLGIPVIL--MSYTSSVIPIILATYV 238
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
G KIE GFKK+IPDVVK F+VPF TLL+ VPL F+VIGP+ +WA L+GAL IY SP
Sbjct: 239 GGKIENGFKKVIPDVVKTFLVPFCTLLVIVPLTFIVIGPIATWAGKLLGALTLSIYSLSP 298
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILEL---QKGP--GVILVASIAICFAQAGALLN 357
V+ G+ +GA WQV V+FGLHWG +P+AI L + P G+I AS FAQ G +
Sbjct: 299 VVAGLFMGAFWQVFVIFGLHWGFIPIAINNLTVLHQDPILGLIFAAS----FAQTGVVGA 354
Query: 358 IMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDV 417
I+++TK K++ L IPAFIS +FGVTEPAIYGITLP + PFI++CI G+L GA L F
Sbjct: 355 ILLKTKNSKLKGLCIPAFISGIFGVTEPAIYGITLPRKKPFILSCIGGSLGGAILGFMGS 414
Query: 418 KMQVMGGMGLFAIPSFIEASNSMTLIHF--LIAIVANFVLGFGLTQLIKIP-NLFGGPSE 474
+ ++GG+G+F IP +I N M + +IA++A F++GF L K+ N G S+
Sbjct: 415 NVYMIGGLGIFGIPGYI-GPNGMDRGFYGSIIAMIAGFLIGFILMLFTKLEDNTDSGKSK 473
Query: 475 KDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEV 534
D + V + ++++ SPL GEV L + D F+ GA+GKG+AIEP G++
Sbjct: 474 NDL--------KTVQPLVRQEILVSPLKGEVKPLSEVKDEAFSKGALGKGIAIEPKEGKI 525
Query: 535 VAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLL 594
+AP DGV+ FPT HAIG+ + +GAE+LIHVGMDTV L+GK F QG VK GQ+L
Sbjct: 526 LAPVDGVLTTFFPTGHAIGITSANGAEILIHVGMDTVQLEGKYFYPKAKQGDTVKAGQVL 585
Query: 595 LSFDIDTIKEAGYPVTTPIIVTNTANY 621
L FDID+I++ GY + TP+++TN+ +Y
Sbjct: 586 LEFDIDSIEKEGYSLITPVVITNSDSY 612
>gi|58337042|ref|YP_193627.1| phosphotransferase system enzyme II [Lactobacillus acidophilus
NCFM]
gi|58254359|gb|AAV42596.1| phosphotransferase system enzyme II [Lactobacillus acidophilus
NCFM]
Length = 663
Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats.
Identities = 321/647 (49%), Positives = 443/647 (68%), Gaps = 7/647 (1%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MAK+Y +LAK I+ VGGKDN+ +VHC TRLRF LKDE KAD D L DGVVTVVKAG
Sbjct: 1 MAKNYDQLAKTIIKDVGGKDNVNSVVHCATRLRFKLKDEKKADDDALKNTDGVVTVVKAG 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLF-DRFIALVSGLFQPMLGT 119
GQYQVVIGN V DVY+ VLK G SG G V D + + F D+ +AL+SG+F +L
Sbjct: 61 GQYQVVIGNEVADVYDAVLKEGGFSGGGEVPDDYSEDDNSSFVDKAVALISGIFTDILAP 120
Query: 120 LSAAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTA 178
LSA G+IKG+V + AA+G ++ + GAY +L A GD +F FLP+ L +TAA+RF MNQF
Sbjct: 121 LSAGGIIKGLVVLAAAMGWLSTSSGAYQILYAIGDSIFYFLPIFLGVTAARRFHMNQFIG 180
Query: 179 LAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIA 238
LAIG L YP + ++ L TLFAGTP S I +TFFG+P+I +Y STVLPV+
Sbjct: 181 LAIGATLTYPTMVQLAASKTVLGTLFAGTPFASQIHTTFFGIPVI--TMNYTSTVLPVLF 238
Query: 239 AVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIY 298
AVW + IE KK IP VV++F+VP T++IT+P+AF+VIGPVM+W + +GA+ +GIY
Sbjct: 239 AVWFASIIEHWSKKWIPSVVQMFLVPVVTMIITLPIAFIVIGPVMTWVGNAIGAVMSGIY 298
Query: 299 DFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLN 357
FSP++ G++LG WQVLV+FG+HWG+V + +L G IL + +C+AQ G +L
Sbjct: 299 HFSPIIAGLLLGGLWQVLVIFGVHWGIVAVTTADLAALGYDPILGMTCMVCYAQIGVVLA 358
Query: 358 IMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDV 417
I+ +TK++K+++ + AF S LFGVTEPAIYGITLP + PF+++CI+GA++GA + F
Sbjct: 359 IIKQTKDKKLKENATGAFFSGLFGVTEPAIYGITLPRKRPFVLSCIAGAVSGAIIGAFHS 418
Query: 418 KMQVMGGMGLFAIPSFIEASN-SMT-LIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEK 475
+ ++ MG FAIP++I SMT +I +IA V F++GF L L ++ +K
Sbjct: 419 VLYILPSMGFFAIPAYINPKGGSMTQIIGVIIAGVVAFIVGFALQMLFGKKSVDAKYDKK 478
Query: 476 DAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVV 535
+ +E + + + + SP G+++ L + D VF+SGAMGKG+AIEPS G +
Sbjct: 479 QTEKVEVNETLQTTPDVATATLASPENGQIMPLSEVKDDVFSSGAMGKGIAIEPSDGVLH 538
Query: 536 APADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLL 595
APADG I + F T HAIG+ T +GAE+L+H+GMDT L GKGF V + KVK G L+
Sbjct: 539 APADGKIIMTFKTGHAIGMKTKNGAEILMHIGMDTANLQGKGFDTLVEKDQKVKAGDPLI 598
Query: 596 SFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
FDID IK+AGYPVTTP++VTN+ ++ I+ + KGE+++G +LEL+
Sbjct: 599 KFDIDLIKKAGYPVTTPMVVTNSQDFDDIKQIVKGEVKVGQAVLELE 645
>gi|116630227|ref|YP_815399.1| Trehalose PTS trehalose component IIBC [Lactobacillus gasseri ATCC
33323]
gi|116095809|gb|ABJ60961.1| Trehalose PTS trehalose component IIBC [Lactobacillus gasseri ATCC
33323]
Length = 672
Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats.
Identities = 329/661 (49%), Positives = 458/661 (69%), Gaps = 23/661 (3%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MAK+Y LAK I+ VGGKDN+ +VHC TRLRF LKDE KA+ D L DGVVTVVKAG
Sbjct: 1 MAKNYDALAKTIIKDVGGKDNVISVVHCTTRLRFKLKDEKKANDDALKDTDGVVTVVKAG 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGN--LFDRFIALVSGLFQPMLG 118
GQYQVVIGN V DVYE VLK G SG G V ADDD + N L D+ I L+SG+F P+LG
Sbjct: 61 GQYQVVIGNEVADVYEAVLKEGGFSGGGQV-ADDDLDDSNMSLMDKAIDLISGIFTPILG 119
Query: 119 TLSAAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFT 177
++AAGMIKG+ A+ A+ G +AKT G Y VL A GDG F FLPLILAIT+AK+FK+++FT
Sbjct: 120 PMAAAGMIKGLTAMCASFGWLAKTSGTYEVLYAIGDGFFYFLPLILAITSAKKFKVDRFT 179
Query: 178 ALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVI 237
A+ IG A+ YP + A +++K L+ LF GT + S + +TF G+PII + +Y STV+P+I
Sbjct: 180 AITIGAAMCYPAMVAMNSSKKVLFDLFNGTFLHSQVHATFLGIPII--SMNYTSTVIPII 237
Query: 238 AAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGI 297
AVW + +E+ KK IP VVK F+VPF TLLI VPL FL+IGP+ +W + + A+ + +
Sbjct: 238 LAVWFASVVERWCKKWIPTVVKTFLVPFVTLLIVVPLTFLIIGPLATWIGNALAAITSAV 297
Query: 298 YDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALL 356
Y+FSPVL G++LG+ WQV V+FG+HWG V + + + G IL S+ FAQ G +L
Sbjct: 298 YNFSPVLAGVLLGSFWQVFVIFGVHWGFVAVMMSNIAALGYDPILGLSLGASFAQIGVVL 357
Query: 357 NIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFD 416
I+++TK++K++ +++PAF+S +FGVTEPAIYG+TLP + PF+++CI+ + G + FF
Sbjct: 358 AILLQTKDQKLKGIALPAFLSGIFGVTEPAIYGVTLPRKKPFVLSCIAAGIGGGLIGFFG 417
Query: 417 VKMQVMGGMGLFAIPSFI--EASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSE 474
KM +MGGMG+F IP+ I + M++ +IA+ +FVLGF L + ++ E
Sbjct: 418 TKMYMMGGMGVFVIPAAIGPKTGVDMSVYGLMIAMAVSFVLGFILQIALGKKSVDQAYDE 477
Query: 475 KDA-------------AESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAM 521
K A A++ S ++ ++V SPLAGE++ L + D VF+SGAM
Sbjct: 478 KQAKTVQEVANQADAIAKAAPSLASTSDLNVSTELV-SPLAGELLPLSEVKDEVFSSGAM 536
Query: 522 GKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAH 581
G+GVA+EPS G + APADG + + FPT HAIG+ T DGAE+L+H+GMDTV L G GF
Sbjct: 537 GEGVAVEPSEGVLHAPADGKVVMTFPTGHAIGMKTSDGAEILMHIGMDTVNLQGHGFETL 596
Query: 582 VVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
V +G +VK G L+ FDID I GY VTTPI+VTN+ +Y++I V+++G++++G ++L+L
Sbjct: 597 VAKGDEVKAGDELVKFDIDAIHAKGYVVTTPIVVTNSKDYEKITVVSQGKVKVGQEILDL 656
Query: 642 K 642
+
Sbjct: 657 E 657
>gi|15613158|ref|NP_241461.1| PTS system, beta-glucoside-specific enzyme II, ABC component
[Bacillus halodurans C-125]
gi|46397038|sp|Q9KF90|PTV3B_BACHD PTS system beta-glucoside-specific EIIBCA component (EIIBCA-Bgl)
(EII-Bgl) [Includes: Beta-glucoside-specific
phosphotransferase enzyme IIB component (PTS system
beta-glucoside-specific EIIB component); Beta-glucoside
permease IIC component (PTS system
beta-glucoside-specific EIIC component);
Beta-glucoside-specific phosphotransferase enzyme IIA
component (PTS system beta-glucoside-specific EIIA
component)]
gi|10173209|dbj|BAB04314.1| PTS system, beta-glucoside-specific enzyme II, ABC component
[Bacillus halodurans C-125]
Length = 636
Score = 574 bits (1479), Expect = e-162, Method: Composition-based stats.
Identities = 315/644 (48%), Positives = 442/644 (68%), Gaps = 15/644 (2%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +LAKDI+ HVGGK+N+ +VHC+TRLRF LKDE KA+TD L DG+VTV+K+GGQYQ
Sbjct: 3 YEQLAKDIIQHVGGKENVISVVHCITRLRFKLKDEGKANTDVLKNMDGIVTVMKSGGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHVPDVY+ V+++ G + + +D+ LF++FI +++ +F P+LG L+A G
Sbjct: 63 VVIGNHVPDVYKDVVEIGGFQNQAETETEDEKKYQGLFNKFIDIIASIFTPVLGVLAATG 122
Query: 125 MIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
MIKG+ A+ + GV + +G Y +L+A GD LF F P+ L TAAK+F F +AIG
Sbjct: 123 MIKGLNALFLSTGVLEEANGTYQLLHAIGDSLFYFFPIFLGYTAAKKFGATPFIGMAIGA 182
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
+LVYP + T +PLYTLF GT ESP+ TF G+P+I SY ++V+P+I A +
Sbjct: 183 SLVYPTLVV-LTEGEPLYTLFTGTIFESPVHITFLGIPVIL--MSYATSVIPIILAAYFA 239
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
+K+E +KIIPDVVK F+VPFFTLLI VPL F+VIGP+ +WA L+G +Y+ SP+
Sbjct: 240 SKVEARLRKIIPDVVKTFLVPFFTLLIVVPLTFIVIGPIATWAGQLLGQFTLWVYNLSPI 299
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALLNIMMRT 362
+ G LG WQV V+FGLHWGL+P+AI L +G +L A FAQ GA+ + ++
Sbjct: 300 IAGAFLGGFWQVFVIFGLHWGLIPIAINNLVVQGSDPVLAMVFAASFAQIGAVAAVWLKI 359
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
K++KV+ LS+PAFIS +FGVTEPAIYG+TLP++ PFI++CI+ A+ GA + F + ++
Sbjct: 360 KQQKVKTLSVPAFISGIFGVTEPAIYGVTLPLKRPFIISCIAAAVGGAIIGLFRSQGYII 419
Query: 423 GGMGLFAIPSFIEASNSMT--LIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
GG+G+F IPSF+ ++ M +IA+V FVLGF LT L G +A++
Sbjct: 420 GGLGIFGIPSFLHPADGMDAGFWGIVIAVVVAFVLGFILTYLF-------GLKSGNASDE 472
Query: 481 LDSEKERVSAGITE-QVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
K S G E + ++SP G V+ L + D F+SGA+G+G+AIEPS G++ +P
Sbjct: 473 QTETKAHTSTGTGEKEEISSPFNGSVITLSEIKDEAFSSGALGEGIAIEPSEGKLFSPVS 532
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G++ L+PT+HA+G+ TD GAELLIH+G+DTV LDGK FTAH +QG++V+KG LL+ FDI
Sbjct: 533 GMVTALYPTHHALGITTDRGAELLIHIGLDTVQLDGKFFTAHTIQGAQVEKGDLLIEFDI 592
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
IK AGY VTTP+IVTN Y Q+ + K ++ G++LLEL +
Sbjct: 593 KEIKAAGYAVTTPVIVTNHKQYGQLFLTDKQQVNAGDRLLELTR 636
>gi|145953556|ref|ZP_01802564.1| hypothetical protein CdifQ_04003546 [Clostridium difficile
QCD-32g58]
Length = 638
Score = 571 bits (1471), Expect = e-161, Method: Composition-based stats.
Identities = 316/628 (50%), Positives = 432/628 (68%), Gaps = 16/628 (2%)
Query: 3 KDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQ 62
+ Y +L+K+I+ +VGGKDNI+ L HC+TRLRF LKDES A+ D L K DG+VTV+K+ GQ
Sbjct: 2 RRYEQLSKEIIENVGGKDNISSLSHCITRLRFKLKDESIANDDVLKKMDGIVTVMKSAGQ 61
Query: 63 YQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
YQVVIGNHVPDVYE V +AG+ G+ ++D DA +G L ++FI ++SG+FQP+LG L A
Sbjct: 62 YQVVIGNHVPDVYEVVCDLAGLGGDTIDNSDSDAPKG-LLNKFIDIISGVFQPILGVLCA 120
Query: 123 AGMIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAI 181
AGMIKG A+ ALG+ +TDGAY++LNA GD +FQ++P+IL TAAK+FK+ F + I
Sbjct: 121 AGMIKGFNAVFTALGLYGETDGAYIMLNAIGDAMFQYMPIILGYTAAKKFKLKPFIGMLI 180
Query: 182 GFALVYPNIAASFTAE--KPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAA 239
G L Y I A +PLY LF GT ESP++ TF GLP+I A +Y STV+PVI
Sbjct: 181 GAVLCYSGIQLDTLASIGQPLYNLFTGTIFESPVYITFLGLPVI--AMNYTSTVVPVIII 238
Query: 240 VWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD 299
V AK+EK F KIIPDVVK F VP LL+++PL F+VIGP+ ++AS++VG F +++
Sbjct: 239 VLLAAKLEKVFAKIIPDVVKNFFVPMAVLLVSLPLGFMVIGPIATYASNIVGNGFLALFN 298
Query: 300 FSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNI 358
FSP+L G++ G WQVLV+FGLHWGLVP+A+ L G ILV + FAQ + +
Sbjct: 299 FSPILCGVLTGLLWQVLVIFGLHWGLVPIAMSNLMTMGFDTILVGAFVPSFAQTSVVAAM 358
Query: 359 MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVK 418
+ K++K+++L IPA IS + GV EPAIYGITLP + PFI +C+ GA+ GA + +VK
Sbjct: 359 YFKLKDKKIKELCIPAVISGICGVIEPAIYGITLPRKTPFIYSCVGGAVAGAVMGIMNVK 418
Query: 419 MQVMGGMGLFAIPSFIEAS--NSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKD 476
VMGG+G+F IP++I + + + +IAI+ V+GF LT LF +
Sbjct: 419 SYVMGGLGIFGIPNYINPTTGDMKGVYATIIAIIVAIVVGFVLT-------LFFWKDDSI 471
Query: 477 AAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVA 536
S D+ + V +VV SP+ GEV ALE DA F++G +GKGVAI P G+VVA
Sbjct: 472 VEISKDNNGQGVVEKNKREVVYSPIKGEVKALEQIQDAAFSTGILGKGVAITPKEGKVVA 531
Query: 537 PADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLS 596
P DG I LFPT HAIG+ +D+G ELLIH+G++T+ L+GK F + V QG K+KKGQ L++
Sbjct: 532 PFDGTIMTLFPTKHAIGIISDNGCELLIHIGLNTIQLEGKHFKSFVNQGDKIKKGQTLIT 591
Query: 597 FDIDTIKEAGYPVTTPIIVTNTANYKQI 624
FDI++I + GY + TP++VTN ++Y I
Sbjct: 592 FDIESISKEGYCLETPVVVTNYSDYVDI 619
>gi|28379841|ref|NP_786733.1| beta-glucosides PTS, EIIBCA [Lactobacillus plantarum WCFS1]
gi|28272682|emb|CAD65611.1| beta-glucosides PTS, EIIBCA [Lactobacillus plantarum WCFS1]
Length = 665
Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats.
Identities = 316/664 (47%), Positives = 445/664 (67%), Gaps = 29/664 (4%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +L+K I+A VGGKDN+ +VHC TRLRF LKDES TD L DGV+TVV++GGQYQ
Sbjct: 3 YEDLSKKIIAGVGGKDNVKSVVHCTTRLRFKLKDESATHTDELKDTDGVITVVQSGGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDAD-DDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
VVIGN V DVYET+++V G + GSV D +D + ++FDRFI L+SG+F PMLG L AA
Sbjct: 63 VVIGNEVADVYETLIRVGGFADGGSVPDDYEDGEKMSIFDRFIDLISGIFTPMLGVLCAA 122
Query: 124 GMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GMIKG VA+ A +++ G Y +L + GDG F FLP++L +TAAK+F ++QF +AIG
Sbjct: 123 GMIKGFVAMFVAFNWLSENSGTYKILYSIGDGFFYFLPIVLGLTAAKKFHVDQFVGMAIG 182
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
AL YP+I A +++ L TLF+G+ ES I +TF G+P++ SY S+V+P+I AVW
Sbjct: 183 MALCYPSIVALNSSKTVLSTLFSGSIFESQIHATFLGIPVVM--MSYTSSVIPIILAVWF 240
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+K++ K+I+P VVK F+VPF TLLI VP+ FL+IGPV SW SD + + IY+FSP
Sbjct: 241 ASKVQAFAKRIVPTVVKTFLVPFITLLIAVPITFLIIGPVASWLSDGISTVCVAIYNFSP 300
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMMR 361
++ G+V+GA WQV V+FG+HWG V + + L +G IL S+A FAQ G +L I+++
Sbjct: 301 IVAGLVMGAFWQVFVIFGVHWGFVAVMMANLASQGFDPILGLSLAASFAQTGVVLGILLQ 360
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
TK +K R +++PAFIS +FGVTEPAIYG+TLP + PFI++C++ ++ G + F KM +
Sbjct: 361 TKNQKTRGIALPAFISGIFGVTEPAIYGLTLPRKRPFILSCVAASIGGGIIGFAGTKMYM 420
Query: 422 MGGMGLFAIPSFIEASNSM--TLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
MGGMGLF+IP+ I + + ++ +IA+ VLGF L L ++ + E
Sbjct: 421 MGGMGLFSIPAAINSKTGVDGSVYGLIIAMAIAAVLGFALQMLFGYKSVDSNDKQTKVVE 480
Query: 480 SLDSEKERVSAGITEQV--------------------VTSPLAGEVVALEDTPDAVFASG 519
+ + ++ G++ + ++SP G+++ L + D VF+SG
Sbjct: 481 TAATADPVMAGGVSVETTPTGAATKVEPNVTYNAATKLSSPETGQIIPLSEVKDEVFSSG 540
Query: 520 AMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFT 579
AMGKGVAIEP+ G + APADG + L+FPT HA+GL T DGAE+L+H+GMDTV L+GKGF
Sbjct: 541 AMGKGVAIEPTDGVLYAPADGEVALVFPTGHAVGLNTTDGAEILMHIGMDTVELEGKGFE 600
Query: 580 AHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVL--AKGEIQLGNQ 637
V +G VK GQ L+ FDI+ IK AGYPVTTP++VTN+ NY +++ A E+
Sbjct: 601 TLVQKGETVKAGQPLVKFDIEAIKAAGYPVTTPMVVTNSKNYHDVKLAFPAATEVNATEP 660
Query: 638 LLEL 641
LL+L
Sbjct: 661 LLQL 664
>gi|15894686|ref|NP_348035.1| PTS system, beta-glucosides-specific IIABC component [Clostridium
acetobutylicum ATCC 824]
gi|15024346|gb|AAK79375.1|AE007652_5 PTS system, beta-glucosides-specific IIABC component [Clostridium
acetobutylicum ATCC 824]
Length = 628
Score = 564 bits (1453), Expect = e-159, Method: Composition-based stats.
Identities = 312/640 (48%), Positives = 430/640 (67%), Gaps = 23/640 (3%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +LAKDI+ +VGGK+N+ L HC+TRLRF LKDESKA+TD L DGVVTV+K+GGQYQ
Sbjct: 3 YEKLAKDIIENVGGKENVNSLTHCITRLRFKLKDESKANTDVLKNMDGVVTVIKSGGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHVPDVY V+ + G S S + + NLF+ FI +SG+F P LG L+A G
Sbjct: 63 VVIGNHVPDVYADVVAIGGFS---SSSEEGTKEKTNLFNAFIDTISGVFTPTLGVLAATG 119
Query: 125 MIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
MIKG A+ A G + KT G Y +LNA GD LF F P+ L +AAK+FK N F +AIG
Sbjct: 120 MIKGFNAMFIAFGWLTKTSGTYNILNAVGDCLFYFFPIFLGYSAAKKFKGNHFIGMAIGA 179
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
+LVYP ++ T KPLYTLF GT SP++ TF G+P+I SY STV+P+I A + G
Sbjct: 180 SLVYPTLSTLMTG-KPLYTLFQGTIFASPVYVTFLGIPVIL--MSYSSTVIPIILASYVG 236
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
K+EK F KIIPDVVK F+VPF TLL+ VPL+ +VIGP+ +WA L+GA IY+ SP+
Sbjct: 237 VKVEKAFAKIIPDVVKTFLVPFCTLLVMVPLSLIVIGPISTWAGKLLGAGTLAIYNLSPI 296
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILEL---QKGPGVILVASIAICFAQAGALLNIMM 360
L G+ +GA WQV V+FGLHWGLVP+A+ L P IL ++ FAQ G +L I++
Sbjct: 297 LAGLFIGAFWQVFVIFGLHWGLVPIAMNNLSVLHYDP--ILAGTLGASFAQTGVVLAILI 354
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
+TK K++ +++PAFIS +FGVTEPAIYG+TLP + PFI++CI A+ G F K+
Sbjct: 355 KTKNVKLKGIALPAFISGIFGVTEPAIYGVTLPRKKPFIISCIGAAIGGGITGFMGTKLW 414
Query: 421 VMGGMGLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
+MGG+G+FAIPS+I A ++++V +FV+GF + F G +++ +
Sbjct: 415 MMGGLGIFAIPSYIGAKGMDRGFYGAVMSVVISFVVGFLIM-------FFAGFKDEEVKQ 467
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+K + + ++ + SPL G++ L + D F++G++GKG+AIEP G++V+P D
Sbjct: 468 ETTKKKNEL---VKQETLVSPLKGKIKTLSEVKDEAFSTGSLGKGIAIEPEEGKLVSPVD 524
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
GV+ LFPT HA+G+ +D G E+LIHVGMDTV L+GK F + QG VK G +L FDI
Sbjct: 525 GVLATLFPTGHAVGIISDKGTEILIHVGMDTVQLEGKYFKTILKQGDHVKAGDTILEFDI 584
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
IK+AGY +TTP++VTN+ +Y + K +++ +QLL
Sbjct: 585 PKIKKAGYTLTTPVVVTNSESYLDVIETDKIKVERKDQLL 624
>gi|152974600|ref|YP_001374117.1| PTS system, beta-glucoside-specific IIABC subunit [Bacillus cereus
subsp. cytotoxis NVH 391-98]
gi|152023352|gb|ABS21122.1| PTS system, beta-glucoside-specific IIABC subunit [Bacillus cereus
subsp. cytotoxis NVH 391-98]
Length = 636
Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats.
Identities = 319/642 (49%), Positives = 435/642 (67%), Gaps = 14/642 (2%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +LAKDI+ +VGG +NI +VHC+TRLRF LKDE KA+T+ L D VVTV+K+GGQYQ
Sbjct: 3 YEQLAKDILKNVGGTENINSVVHCITRLRFQLKDEGKANTEVLKNMDDVVTVMKSGGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHV DVY+ V+ V G + +D+ ++ FI +VS +F P+L L+A G
Sbjct: 63 VVIGNHVADVYKAVVTVGGFQTK-----EDENIDDQKKSSFIDIVSSIFTPVLSVLAATG 117
Query: 125 MIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
MIKG A++ ALG +++ G Y +LNA GD LF F P+ L TA+K+F F +AIG
Sbjct: 118 MIKGFNALILALGWLSQESGTYQILNAVGDSLFYFFPIFLGYTASKKFHGAPFIGMAIGG 177
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
ALVYP +A TA KPLYTLFAGT ESPI TF G+P+I +Y S+V+P+I A +
Sbjct: 178 ALVYPALAG-LTAGKPLYTLFAGTMFESPIHITFLGIPVIL--MNYASSVIPIILATYFA 234
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
AK+EK KK+IPDVVK F+VPFFTLLI VP+ FLVIGP+ +WA +G Y SP+
Sbjct: 235 AKVEKELKKVIPDVVKTFLVPFFTLLIIVPITFLVIGPIATWAGQFLGQATLWAYHLSPL 294
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALLNIMMRT 362
+ GI LGA WQ+ V+FGLHWG+VP+ L G IL A FAQ GA+L + ++T
Sbjct: 295 VAGIFLGAFWQLFVIFGLHWGIVPIGFNNLAVHGEDPILALIFAASFAQIGAVLGVWIKT 354
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
E+K+++LS+PAFIS +FG+TEPAIYGITLP + PF+++CI+G + G L F K +
Sbjct: 355 NEKKLKELSMPAFISGIFGITEPAIYGITLPQKKPFVISCIAGGIGGGILGVFGTKAYMA 414
Query: 423 GGMGLFAIPSFIEASNSMT--LIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
GG+G+F IP+F+ + +T L +IA++ FVLGF LT L + G + + ++
Sbjct: 415 GGLGIFQIPTFVSSKTGITAGLWGSIIAMIVAFVLGFVLTYLFGVKKK-GQSVQVNPDQT 473
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
S+ E V A + +V+ SP GEV L+D DA FASG +GKGVAIEPS G++ +P G
Sbjct: 474 KPSQHEEVHATMNSEVIVSPFYGEVKPLKDIEDAAFASGVLGKGVAIEPSEGKLFSPVSG 533
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
+ LFPTNHA+G+ T+ GAELLIH+GMDTV LDG+ F++H+ QG V+KGQLL+ F+I
Sbjct: 534 TVSALFPTNHALGITTETGAELLIHIGMDTVKLDGEFFSSHIAQGDHVEKGQLLIEFNIA 593
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
I++AGY VTTP++VTN Y + + KG++ ++EL+
Sbjct: 594 EIQDAGYIVTTPVVVTNHDQY-NVMIKEKGQVTPEESVIELE 634
>gi|52144365|ref|YP_082463.1| PTS system, beta-glucoside-specific enzyme II, ABC component
[Bacillus cereus E33L]
gi|51977834|gb|AAU19384.1| PTS system, beta-glucoside-specific enzyme II, ABC component
[Bacillus cereus E33L]
Length = 630
Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats.
Identities = 310/643 (48%), Positives = 437/643 (67%), Gaps = 24/643 (3%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +LAKDI+ HVGG++NI +VHC+TRLRF LKDE KA+T+ L + +VTV+K+GGQYQ
Sbjct: 3 YEKLAKDILKHVGGRENINSVVHCITRLRFQLKDEGKANTEVLKGMEDIVTVMKSGGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHV DVY+ V+ G + ++++ I ++S +F P+LG L+A G
Sbjct: 63 VVIGNHVSDVYKAVIAAGGFQ-----ETEEESASEKKKSSLIDILSSIFTPILGVLAATG 117
Query: 125 MIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
MIKG A+ ALG ++ G Y +LNA GD LF F P+ L TA+K+F + F +AIG
Sbjct: 118 MIKGFNALFVALGWLSNESGTYQILNAVGDSLFYFFPIFLGYTASKKFGGSPFIGMAIGG 177
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
ALVYP ++ A +PLYTLFAGT ESPI TF G+P+I +Y S+V+P+I A + G
Sbjct: 178 ALVYPALSG-LKASEPLYTLFAGTMFESPIHITFLGIPVIL--MNYASSVIPIILAAYFG 234
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
A++E KK+IPDVVK F++PF TLLI VP+ FLVIGP+ +WA +G +Y SP+
Sbjct: 235 ARVENSLKKVIPDVVKTFVLPFLTLLIVVPVTFLVIGPIATWAGQFLGQATLWVYHLSPL 294
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALLNIMMRT 362
+ G +LGA WQVLV+FGLHWG+VP+ L G IL A FAQ GA+L + ++T
Sbjct: 295 VAGALLGAFWQVLVIFGLHWGVVPIGYNNLAVHGIDPILALIFAASFAQIGAVLGVWVKT 354
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
K++K++ LSIPAFIS +FGVTEPAIYGITLP++ PFIM+CI+G + GA L F + +
Sbjct: 355 KDQKLKTLSIPAFISGIFGVTEPAIYGITLPLKKPFIMSCIAGGVGGAILGVFGTQAYMT 414
Query: 423 GGMGLFAIPSFIEASNSMTLIHF--LIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
GG+G+F IP+FI + +T + ++++V + ++GF LT L G ++K +
Sbjct: 415 GGLGIFTIPTFISPKDGLTAGFWGAIVSMVVSLLVGFILTYLF-------GFTKKQTSTD 467
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+ +++A ++V+ SP G V+ L++ DA FASGA+G+GVAIEPS G++ +P G
Sbjct: 468 TEETSNKIAASNDDEVIFSPFHGVVIPLQNIDDAAFASGALGEGVAIEPSEGKLFSPVSG 527
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I LFPTNHA+G+ D GAE+LIH+GMDTV L+G+ F++H+ QG++V+KGQLL+ F I
Sbjct: 528 TISALFPTNHAVGITADSGAEILIHIGMDTVKLNGEFFSSHIEQGARVEKGQLLIEFHIA 587
Query: 601 TIKEAGYPVTTPIIVTNTANY--KQIEVLAKGEIQLGNQLLEL 641
I++AGY VTTP++VTN Y K+ EV +IQ G+ LL+L
Sbjct: 588 EIQKAGYIVTTPVVVTNYDRYSMKKTEV---EKIQAGDSLLKL 627
>gi|126700714|ref|YP_001089611.1| PTS system, IIabc component [Clostridium difficile 630]
gi|115252151|emb|CAJ69989.1| PTS system, IIabc component [Clostridium difficile 630]
Length = 638
Score = 561 bits (1445), Expect = e-158, Method: Composition-based stats.
Identities = 314/628 (50%), Positives = 433/628 (68%), Gaps = 16/628 (2%)
Query: 3 KDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQ 62
+ Y +L+K+I+A+VGGKDNI+ L HC+TRLRF LKDES A+ D L K DG+VTV+K+ GQ
Sbjct: 2 RKYEQLSKEIIANVGGKDNISSLSHCITRLRFKLKDESIANDDVLKKMDGIVTVMKSAGQ 61
Query: 63 YQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
YQVVIGNHVPDVYE V +AG+ G+ ++D DA +G L ++FI ++SG+FQP+LG L A
Sbjct: 62 YQVVIGNHVPDVYEVVCDLAGLGGDTIDNSDSDAPKG-LLNKFIDIISGVFQPILGVLCA 120
Query: 123 AGMIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAI 181
AGMIKG A+ ALG+ +TDGAY++LNA GD +FQ++P+IL TAAK+FK+ F + I
Sbjct: 121 AGMIKGFNAVFTALGLYGETDGAYIMLNAIGDAMFQYMPIILGYTAAKKFKLKPFIGMLI 180
Query: 182 GFALVYPNIAASFTAE--KPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAA 239
G L Y I A +PLY LF GT ESP++ TF GLP+I A +Y STV+PVI
Sbjct: 181 GAVLCYSGIQLDTLASTGQPLYNLFTGTIFESPVYITFLGLPVI--AMNYTSTVVPVILI 238
Query: 240 VWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD 299
V AK+EK F KIIPDVVK F VP LL+++PL F+VIGP+ ++AS++VG F +++
Sbjct: 239 VLLAAKLEKVFAKIIPDVVKNFFVPMAVLLVSLPLGFMVIGPIATYASNIVGNGFLALFN 298
Query: 300 FSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNI 358
FSP+L G + G WQVLV+FGLHWGLVP+A+ L G ILV + FAQ + +
Sbjct: 299 FSPILCGALTGLLWQVLVIFGLHWGLVPIAMSNLMTMGFDTILVGAFVPSFAQTAVVAAM 358
Query: 359 MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVK 418
+ K++K+++L IPA IS + GVTEPAIYGITLP + PFI +C+ G + GA + +VK
Sbjct: 359 YFKLKDKKIKELCIPAVISGICGVTEPAIYGITLPRKTPFIYSCVGGGVAGAVMGIMNVK 418
Query: 419 MQVMGGMGLFAIPSFIEAS--NSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKD 476
VMGG+G+F IP++I + + + +IAI+ V+GF LT + S+ D
Sbjct: 419 SYVMGGLGIFGIPNYINPTTGDMKGVYATIIAIIVAIVVGFVLTLFFWKEDAIVEISKDD 478
Query: 477 AAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVA 536
+ + + +R +VV SP+ GEV ALE DA F++G +GKGVAI P G+VVA
Sbjct: 479 NGQGVIEKNKR-------EVVYSPIKGEVKALEQIQDAAFSTGILGKGVAITPKEGKVVA 531
Query: 537 PADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLS 596
P DG + LFPT HAIG+ +D+G ELLIH+G++T+ L+GK F + V QG K+KKGQ L++
Sbjct: 532 PFDGTVMTLFPTKHAIGIISDNGCELLIHIGLNTIQLEGKYFKSFVNQGDKIKKGQTLIT 591
Query: 597 FDIDTIKEAGYPVTTPIIVTNTANYKQI 624
FDI++I + GY + TP++VTN ++Y I
Sbjct: 592 FDIESISKEGYCLETPVVVTNYSDYVDI 619
>gi|49477026|ref|YP_035218.1| probable PTS system, beta-glucoside-specific enzyme II, ABC
component [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49328582|gb|AAT59228.1| probable PTS system, beta-glucoside-specific enzyme II, ABC
component [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 630
Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats.
Identities = 312/643 (48%), Positives = 439/643 (68%), Gaps = 24/643 (3%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +LAKDI+ HVGG++NI +VHC+TRLRF LKDE KA+T+ L + +VTV+K+GGQYQ
Sbjct: 3 YEQLAKDILKHVGGRENINSVVHCITRLRFQLKDEGKANTEVLKGMEDIVTVMKSGGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHV DVY+ V+ V G + ++++ I ++S +F P+LG L+A G
Sbjct: 63 VVIGNHVSDVYKAVIAVGGFQ-----ETEEESASEKKKSSLIDILSSIFTPILGVLAATG 117
Query: 125 MIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
MIKG A+ ALG ++ G Y +LNA GD LF F P+ L TA+K+F + F +AIG
Sbjct: 118 MIKGFNALFVALGWLSNESGTYQILNAVGDSLFYFFPIFLGYTASKKFGGSPFIGMAIGG 177
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
ALVYP ++ A +PLYTLFAGT ESPI TF G+P+I +Y S+V+P+I A + G
Sbjct: 178 ALVYPALSG-LKASEPLYTLFAGTMFESPIHITFLGIPVIL--MNYASSVIPIILAAYFG 234
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
A++E+ KK+IPDVVK F++PF TLLI VP+ FLVIGP+ +WA +G +Y SP+
Sbjct: 235 ARVEQSLKKVIPDVVKTFVLPFLTLLIVVPVTFLVIGPIATWAGQFLGQATLWVYHLSPL 294
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALLNIMMRT 362
+ G +LGA WQVLV+FGLHWG+VP+ L G IL A FAQ GA+L + ++T
Sbjct: 295 VAGALLGAFWQVLVIFGLHWGVVPIGYNNLAVHGIDPILALIFAASFAQIGAVLGVWVKT 354
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
K++K++ LSIPAFIS +FGVTEPAIYGITLP++ PFIM+CI+G + GA L F + +
Sbjct: 355 KDKKLKTLSIPAFISGIFGVTEPAIYGITLPLKKPFIMSCIAGGVGGAILGVFGTQSYMT 414
Query: 423 GGMGLFAIPSFIEASNSMTLIHF--LIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
GG+G+F +P+FI + +T + +++IV + ++GF LT L G ++K +
Sbjct: 415 GGLGIFTLPTFISPKDGITAGFWGAIVSIVVSLLVGFILTYLF-------GFTKKQTSTD 467
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+ +++A ++V+ SP G V+ L++ DA FASGA+G+GVAIEPS G++ +P G
Sbjct: 468 TEETSNKIAASNDDEVIFSPFHGAVMPLQNIDDAAFASGALGEGVAIEPSEGKLFSPVSG 527
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I LFPTNHA+G+ D GAE+LIH+GMDTV L+G+ F++H+ QG++V+KGQLL+ F I
Sbjct: 528 TISALFPTNHAVGITADSGAEILIHIGMDTVKLNGEFFSSHIEQGARVEKGQLLIEFHIA 587
Query: 601 TIKEAGYPVTTPIIVTNTANY--KQIEVLAKGEIQLGNQLLEL 641
I++AGY VTTP++VTN Y K+ EV +IQ G+ LLEL
Sbjct: 588 EIQKAGYIVTTPVVVTNYDKYSIKKTEV---EKIQAGDSLLEL 627
>gi|153815619|ref|ZP_01968287.1| hypothetical protein RUMTOR_01855 [Ruminococcus torques ATCC 27756]
gi|145847050|gb|EDK23968.1| hypothetical protein RUMTOR_01855 [Ruminococcus torques ATCC 27756]
Length = 677
Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats.
Identities = 292/659 (44%), Positives = 427/659 (64%), Gaps = 25/659 (3%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y LAKDIV +VGGK+N+T LVHC+TRLRF+LKDES A D L K DGVVTV+K+GGQYQ
Sbjct: 24 YETLAKDIVKNVGGKENVTGLVHCITRLRFTLKDESIAKDDVLKKMDGVVTVMKSGGQYQ 83
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHVP+V+E V+ + ++ E A+ G L DR I +VSG+FQP+LG ++A G
Sbjct: 84 VVIGNHVPEVFEDVMALLDLN-ENKASAETKK-SGKLLDRAIDVVSGIFQPILGIMAACG 141
Query: 125 MIKGVVAIMAALGVAKTD-GAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+KG+ + LG+ D G Y+++NAAGD LF FLPL L TAAK+F++ LAIG
Sbjct: 142 MLKGLNTLFVTLGLYSADCGGYMIINAAGDALFTFLPLFLGYTAAKKFQLKPMLGLAIGA 201
Query: 184 ALVYPNI--AASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVW 241
A+ YP I +A + + T+ GT +SP++ FFG+P+I + Y TV+PVI VW
Sbjct: 202 AMCYPGIQLSALSAGAEAVTTVLEGTLFQSPVYIDFFGIPVI--SVDYTGTVIPVILTVW 259
Query: 242 AGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFS 301
+K EK F + +PD+VK F VP TLL+T+P+A + +GPV ++ S L+ I +FS
Sbjct: 260 FASKCEKLFNRFVPDLVKFFFVPMLTLLVTLPVAMIFLGPVATFGSTLISEFTLMIREFS 319
Query: 302 PVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMM 360
P+L G V+G WQ+LV+FG+HWG +P+ I +Q G +++ A FA + +L +
Sbjct: 320 PLLAGAVVGFTWQILVIFGMHWGFIPVYINNVQTLGYDNVMMPFFACTFATSAVVLAMFF 379
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
+TK++K+++++IP FIS +FGVTEPAIYG+ LP++ PFI++CI+G + GA+ F+ +
Sbjct: 380 KTKDKKIKEMAIPNFISGIFGVTEPAIYGMLLPLKKPFIISCIAGGIGGAFYGHFNFRKF 439
Query: 421 VMGGMGLFAIPSFI--EASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
++GGMG+F +P+ I + +N ++ F I I + V+GF LT + G E D
Sbjct: 440 ILGGMGIFELPNMINPDGTNGNIIVAF-IGIAISMVVGFVLTMIFYHDEKTGKTGEIDMK 498
Query: 479 ESLDSEK-----ERVSAGITEQV---------VTSPLAGEVVALEDTPDAVFASGAMGKG 524
++ + E E+ ++++ ++SPL GEV+AL D D F+SGA+G G
Sbjct: 499 KNREKEDKIGKIEKFDKNESDKIDRKERKTEKISSPLKGEVIALSDVQDEAFSSGALGLG 558
Query: 525 VAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQ 584
A++P G + APADG I + FPT HAIG+ TDDG ELLIHVGMDTV L+GKGF +
Sbjct: 559 AAVDPKEGVLYAPADGTISVFFPTGHAIGMTTDDGVELLIHVGMDTVQLEGKGFRPFAKE 618
Query: 585 GSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
G +V KGQ LL FD++ I + GY + TP+++TNT + I + ++ I + L+ + +
Sbjct: 619 GDRVTKGQKLLEFDMELICKEGYSLVTPVLITNTDEFSDISITSECHIDPQSILMTVTR 677
>gi|29374910|ref|NP_814063.1| PTS system, beta-glucoside-specific IIABC component [Enterococcus
faecalis V583]
gi|29342368|gb|AAO80134.1| PTS system, beta-glucoside-specific IIABC component [Enterococcus
faecalis V583]
Length = 632
Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats.
Identities = 310/645 (48%), Positives = 428/645 (66%), Gaps = 30/645 (4%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y ELA+ IV +VGG++NI L HC+TRLRF LKDES+A+ D L DGVVTV+K+GGQYQ
Sbjct: 4 YHELAEKIVKNVGGQENINSLTHCITRLRFKLKDESQANDDVLKNMDGVVTVMKSGGQYQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHVP VYE V+ +AG+SGE +++A GNLFDR I ++SG FQP LG L+AAG
Sbjct: 64 VVIGNHVPAVYEEVVSIAGLSGE----REEEASSGNLFDRLIDILSGCFQPFLGALAAAG 119
Query: 125 MIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+KG+ A++ L + T G Y +LN GD +F F+P+IL TAAK+F+++ + IG
Sbjct: 120 MVKGLNALLVFLKLYTATSGTYTMLNGIGDAIFYFMPVILGYTAAKKFRLHPMVGIVIGA 179
Query: 184 ALVYPNIAASF--TAEKPLYTLFAGTPIES---PIFSTFFGLPIIFPASSYLSTVLPVIA 238
AL YP I S TA + A P P ++TF G+P + ++Y S+V+P+I
Sbjct: 180 ALCYPTIQGSALQTAFETTAGAGAAAPYNLFGLPAYNTFMGIPWV--GANYTSSVVPIIF 237
Query: 239 AVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIY 298
+ A+++K FK+IIP+VV+ F+VPFF LLI +P+ FLVIGP++S +DL+ A FT +
Sbjct: 238 IIAFAAQVQKVFKRIIPEVVQTFLVPFFVLLIALPIGFLVIGPIVSMLTDLLSAGFTALM 297
Query: 299 DFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLN 357
FSP LYG++LG WQVLV+FGLHW +VPLAI+++ Q+G +L S A FAQ +L
Sbjct: 298 SFSPALYGLILGFFWQVLVIFGLHWSVVPLAIMQVTQEGSSQVLTGSFAASFAQTAVVLA 357
Query: 358 IMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDV 417
+ + K++K++ L PA IS +FGVTEPAIYGITLP + PFI + I GA+ G YL +V
Sbjct: 358 MFFKLKDKKLKALCPPAIISGIFGVTEPAIYGITLPKKWPFIYSMIGGAVGGLYLMINNV 417
Query: 418 KMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDA 477
MGG+G+F + +FI ++ +I IAI V+GFGLT N
Sbjct: 418 TAYTMGGLGIFGVLNFINGDDASGMIQSFIAIAIAAVVGFGLTFFFWKDNTV-------- 469
Query: 478 AESLDSEKERV---SAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEV 534
E+E V I ++ +TSP+ G V++L++ D FA+GA+G GV IEP+ G+V
Sbjct: 470 ------EEEEVIIDKTTIKKENITSPVKGRVLSLKNAEDPAFANGALGNGVVIEPTEGKV 523
Query: 535 VAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLL 594
VAP DG I LFPT HA+GL +D+G ELLIH+G+DTV L+G+GF A V QG +VKKGQ L
Sbjct: 524 VAPFDGTIVTLFPTKHALGLISDNGTELLIHIGIDTVQLEGEGFEAFVKQGDRVKKGQTL 583
Query: 595 LSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
++FD++ IK+AG+ PI+VTNTA+Y I + E+ + LL
Sbjct: 584 VTFDLEGIKKAGFSTQIPIVVTNTADYLDILEVGSNEVSTSDDLL 628
>gi|126700743|ref|YP_001089640.1| PTS system, IIabc component [Clostridium difficile 630]
gi|115252180|emb|CAJ70018.1| PTS system, IIabc component [Clostridium difficile 630]
Length = 642
Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats.
Identities = 291/640 (45%), Positives = 431/640 (67%), Gaps = 10/640 (1%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +LA++IV +VGGK+NI+ LVHC+TRLRF+LKDES A+ + L +G+VTV+K+GGQYQ
Sbjct: 4 YKQLAQEIVNNVGGKENISGLVHCITRLRFTLKDESIANDNVLKNMEGIVTVMKSGGQYQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHV VY+ V+++ G+ + S + + GN+ D+ I ++SG+FQP+LG ++A G
Sbjct: 64 VVIGNHVEAVYKDVVEIIGL--DDSSTSSETKKSGNILDKGIDIISGIFQPVLGIMAACG 121
Query: 125 MIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+KG A+ A+G+ + G Y+V+NAAGD LF FLPL L T+AK+F + LA+G
Sbjct: 122 MLKGFNALFVAMGLYSDVSGGYMVINAAGDALFTFLPLFLGYTSAKKFGLKPMLGLALGA 181
Query: 184 ALVYPNIAASFTAEKP--LYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVW 241
A+ YP I S + +YTLF GT SP++ FFGLPI+ + Y TV+P+I V+
Sbjct: 182 AVCYPAIQGSSISAGADVMYTLFKGTMFASPVYIDFFGLPIV--SIDYTGTVVPIIFIVY 239
Query: 242 AGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFS 301
++ EK F K +PD+VK F VP TLLITVP+A +VIGP+ ++ S L+ + I DFS
Sbjct: 240 FASRCEKLFNKCVPDLVKFFFVPMLTLLITVPVALIVIGPIATFGSTLISQIVISIRDFS 299
Query: 302 PVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMM 360
P+L G ++G WQ+LV+FG+HWG +P+ I + G +++ A FA + +L I
Sbjct: 300 PLLAGAIVGFTWQILVIFGMHWGFIPVYINNVMTLGYDNVMMPFFACTFASSAVVLAIFF 359
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
+TK++K+++++IP FIS +FGVTEPAIYGI LP++ PFI++CI+ + GA+ FF+++
Sbjct: 360 KTKDKKLKEMAIPNFISGIFGVTEPAIYGILLPLKKPFIISCIASGIGGAFYGFFNLRKF 419
Query: 421 VMGGMGLFAIPSFIEASNSM-TLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
+ GGMG+F +P+ IE M LI L IV + V+ F LT +I + S+K +
Sbjct: 420 ITGGMGIFELPAMIEPDGGMGNLIVALSGIVISMVVAFVLT-MILYKDEKVEESKKVRNK 478
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ KE S + ++VTSP+ GEV+ L D DA FASG +G+GVAI PS G+VVAP D
Sbjct: 479 GKEEIKEVKSTKLEREIVTSPIKGEVLKLSDIEDAAFASGVLGQGVAIIPSDGKVVAPVD 538
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
GV+ LFP+ HAIG+ +D G E+LIH+G++T+ L+G+GF A + QG ++ KGQ +L+FD+
Sbjct: 539 GVVTTLFPSLHAIGILSDTGVEVLIHIGLNTIQLEGRGFEACIKQGDRITKGQTILNFDV 598
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
D IKE GY TPI++TN++ + + I+L + L+
Sbjct: 599 DAIKELGYSTVTPIVITNSSQFLDVVETESKNIELEDNLI 638
>gi|145953594|ref|ZP_01802602.1| hypothetical protein CdifQ_04003588 [Clostridium difficile
QCD-32g58]
Length = 642
Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats.
Identities = 289/640 (45%), Positives = 429/640 (67%), Gaps = 10/640 (1%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +LA++IV +VGGK+NI+ LVHC+TRLRF+LKDES A+ + L +G+VTV+K+GGQYQ
Sbjct: 4 YKQLAQEIVNNVGGKENISGLVHCITRLRFTLKDESIANDNVLKNMEGIVTVMKSGGQYQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHV VY+ V+++ G+ + S + + GN+ D+ I ++SG+FQP+LG ++A G
Sbjct: 64 VVIGNHVEAVYKDVVEIIGL--DDSSTSSETKKSGNILDKGIDIISGIFQPVLGIMAACG 121
Query: 125 MIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+KG A+ A+G+ + G Y+V+NAAGD LF FLPL L T+AK+F + LA+G
Sbjct: 122 MLKGFNALFVAMGLYSDVSGGYMVINAAGDALFTFLPLFLGYTSAKKFGLKPMLGLALGA 181
Query: 184 ALVYPNIAASFTAEKP--LYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVW 241
A+ YP I S + +YTLF GT SP++ FFGLPI+ + Y TV+P+I V+
Sbjct: 182 AVCYPAIQGSSISAGADVMYTLFKGTMFASPVYIDFFGLPIV--SIDYTGTVVPIIFIVY 239
Query: 242 AGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFS 301
++ EK F K +PD+VK F VP TLLITVP+A +VIGP+ ++ S L+ + I DFS
Sbjct: 240 FASRCEKLFNKFVPDLVKFFFVPMLTLLITVPVALIVIGPIATFGSTLISQIVISIRDFS 299
Query: 302 PVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMM 360
P+L G ++G WQ+LV+FG+HWG +P+ I + G +++ A FA + +L I
Sbjct: 300 PLLAGAIVGFTWQILVIFGMHWGFIPVYINNVMTLGYDNVMMPFFACTFASSAVVLAIFF 359
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
+TK++K+++++IP FIS +FGVTEPAIYGI LP++ PFI++CI+ + GA+ FF+++
Sbjct: 360 KTKDKKLKEMTIPNFISGIFGVTEPAIYGILLPLKKPFIISCIASGIGGAFYGFFNLRKF 419
Query: 421 VMGGMGLFAIPSFIEASNSM-TLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
+ GGMG+F +P+ IE M LI L I + V+ F LT +I + S+K +
Sbjct: 420 ITGGMGIFELPAMIEPDGGMGNLIVALSGIAISMVVAFVLT-MILYKDEKVEESKKVRNK 478
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ KE S + ++V SP+ GEV+ L D DA FASG +G+GVAI PS G+VVAP D
Sbjct: 479 GKEEIKEVKSTKLEREIVASPIKGEVLKLSDIEDAAFASGVLGQGVAIIPSDGKVVAPVD 538
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
GV+ LFP+ HAIG+ +D G E+LIH+G++T+ L+G+GF A + QG ++ KGQ +L+FD+
Sbjct: 539 GVVTTLFPSLHAIGILSDTGVEVLIHIGLNTIQLEGRGFEACIKQGDRITKGQTILNFDV 598
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
D IKE GY TPI++TN++ + + I+L + L+
Sbjct: 599 DAIKELGYSTVTPIVITNSSQFLDVVETESKNIELEDNLI 638
>gi|125623876|ref|YP_001032359.1| similar to PTS system, beta-glucosides specific enzyme IIABC
[Lactococcus lactis subsp. cremoris MG1363]
gi|124492684|emb|CAL97638.1| similar to PTS system, beta-glucosides specific enzyme IIABC
[Lactococcus lactis subsp. cremoris MG1363]
Length = 636
Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats.
Identities = 305/639 (47%), Positives = 414/639 (64%), Gaps = 25/639 (3%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y LAKDIVA+VGGK+N+ +++C+TRLRF L+DE KA+TD L K DGVVTV+++GGQYQ
Sbjct: 4 YEALAKDIVANVGGKENVISVINCITRLRFKLRDEKKANTDVLKKMDGVVTVMQSGGQYQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHVP+V V V G+ D+ A +GNLFD+F+ L+SG+FQP+L L+AAG
Sbjct: 64 VVIGNHVPEVRADVDAVLGVLDTSPADS---AQKGNLFDQFVELISGIFQPILAPLAAAG 120
Query: 125 MIKGVVAIMA-ALGVA-KTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
MIKGV AI++ ALG + ++ Y V NA GDGLF FLP+ + T+ K+F + F + I
Sbjct: 121 MIKGVNAILSFALGQSFQSSATYAVFNAMGDGLFLFLPIFIGYTSMKKFNGSPFVGMMIA 180
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
ALVYP A+ T ES S FG+P P + Y S+V+P+IA
Sbjct: 181 AALVYPGFVDGTVAK---------TFAESGGVS-LFGIPFSVPTAGYGSSVMPIIAITAF 230
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
A +E KKIIPDVVK+F+ PFFT +I++PL FLVIGPVM+ ASD +G + F+P
Sbjct: 231 AAFLEHQLKKIIPDVVKLFLTPFFTAIISIPLGFLVIGPVMNLASDALGKGLLALQGFNP 290
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKG-PGVILVASIAICFAQAGALLNIMMR 361
+++G+VLG AWQVLVMFGLHW +VP AI+ L KG P +L+A+ FAQ GA+ +M++
Sbjct: 291 IIFGLVLGFAWQVLVMFGLHWAIVPFAIIALAKGEPTALLIAASVASFAQTGAVGAVMLK 350
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
TK++++R+L+IPAFIS FGVTEPAIYGITLP + PF ++CI + A +K
Sbjct: 351 TKDKRLRELAIPAFISGWFGVTEPAIYGITLPKKRPFWISCIVSGILSAVAMALGIKAYT 410
Query: 422 MGGMGLFAIPSFIEASNSMT-LIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
MG +G+F+ S I + ++ I +I + GF +T L+ E D ++
Sbjct: 411 MGALGIFSFTSNITLTGEVSGAIKMMIVSAVAVIAGFVVTYLVGF--------EDDVIDN 462
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+K+ ++ + SPL G+V+ L DA F++G MGKG AIEP++GEV AP DG
Sbjct: 463 PSPDKKFNKQKTNKETIGSPLEGKVIPLSQVKDAAFSAGVMGKGAAIEPTLGEVRAPFDG 522
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
+I +LFPT HA+GL + +G ELLIH+G+DTV L+GK F + V QG VKKG LLL FDI+
Sbjct: 523 MIMILFPTKHAVGLISSEGTELLIHIGIDTVQLEGKYFESFVKQGQSVKKGDLLLKFDIE 582
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
I+ AGY PIIVTNT +Y I V + I LL
Sbjct: 583 RIQNAGYSTQVPIIVTNTQDYMDILVTNQSTIHQNEVLL 621
>gi|15673442|ref|NP_267616.1| beta-glucoside-specific PTS system IIABC component [Lactococcus
lactis subsp. lactis Il1403]
gi|12724452|gb|AAK05558.1|AE006376_4 beta-glucoside-specific PTS system IIABC component (EC 2.7.1.69)
[Lactococcus lactis subsp. lactis Il1403]
Length = 636
Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats.
Identities = 303/639 (47%), Positives = 412/639 (64%), Gaps = 25/639 (3%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y LAKDIVA+VGGK+N+ +++C+TRLRF L+DE KA+TD L DGVVTV+++GGQYQ
Sbjct: 4 YEALAKDIVANVGGKENVISVINCITRLRFKLRDEKKANTDVLKNMDGVVTVMQSGGQYQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHVP+V V V G+ D+ +GNLFD+F+ L+SG+FQP+L L+AAG
Sbjct: 64 VVIGNHVPEVRADVDAVLGVLDTSPADSTQ---KGNLFDQFVELISGIFQPILAPLAAAG 120
Query: 125 MIKGVVAIMA-ALGVA-KTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
MIKGV AI++ ALG + + Y V NA GDGLF FLP+ + T+ K+F + F + I
Sbjct: 121 MIKGVNAILSFALGQSFQASATYAVFNAMGDGLFLFLPIFIGYTSMKKFNGSPFVGMMIA 180
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
ALVYP A+ T ES S FG+P P + Y S+V+P+IA
Sbjct: 181 AALVYPGFVDGTVAK---------TFAESGGLS-LFGIPFSVPTAGYGSSVMPIIAITAF 230
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
A +E KKIIPDVVK+F+ PFFT +I++PL FLVIGPVM+ ASD +G + F+P
Sbjct: 231 AAFLEHQLKKIIPDVVKLFLTPFFTAIISIPLGFLVIGPVMNLASDALGKGLLALQGFNP 290
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKG-PGVILVASIAICFAQAGALLNIMMR 361
+++G+VLG AWQVLVMFGLHW +VP AI+ L KG P +L+A+ FAQ GA+ +M++
Sbjct: 291 IIFGLVLGFAWQVLVMFGLHWAIVPFAIIALAKGEPTALLIAASVASFAQTGAVGAVMLK 350
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
TK++++R+L+IPAFIS FGVTEPAIYGITLP + PF ++CI + A +K
Sbjct: 351 TKDKRLRELAIPAFISGWFGVTEPAIYGITLPKKRPFWVSCIVSGILSAVAMALGIKAYT 410
Query: 422 MGGMGLFAIPSFIEASNSMT-LIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
MG +G+F+ S I + ++ I +I + GF +T L+ E D E+
Sbjct: 411 MGALGIFSFTSNITLTGEVSGAIKIMIVSAVAVIAGFVVTYLVGF--------EDDVIEN 462
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+K+ ++++ SPL G+V+ L DA F++G MGKG AIEP++GEV AP DG
Sbjct: 463 PIPDKKFNKQKTNKEIIGSPLEGKVIPLSQVKDAAFSAGVMGKGAAIEPTLGEVRAPFDG 522
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
++ +LFPT HA+GL +++G ELLIH+G+DTV L+GK F V QG VKKG LLL FDI+
Sbjct: 523 MVMILFPTKHAVGLISNEGTELLIHIGIDTVQLEGKYFETFVKQGQSVKKGDLLLKFDIE 582
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
I+ AGY PIIVTNT +Y I V + I LL
Sbjct: 583 RIQNAGYSTQVPIIVTNTQDYMDILVTNQSTIHQNEVLL 621
>gi|69248111|ref|ZP_00604626.1| Sugar-specific permease, EIIA 1 domain:PTS system,
beta-glucoside-specific IIABC component [Enterococcus
faecium DO]
gi|68194548|gb|EAN09041.1| Sugar-specific permease, EIIA 1 domain:PTS system,
beta-glucoside-specific IIABC component [Enterococcus
faecium DO]
Length = 626
Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats.
Identities = 284/623 (45%), Positives = 395/623 (63%), Gaps = 22/623 (3%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y ELA++IV ++GGK+NI L HCVTRLRF LK+E+KA D L K +G+VT++K+GGQYQ
Sbjct: 4 YQELAENIVKNIGGKENIRSLTHCVTRLRFKLKEENKAKDDVLKKMEGIVTIMKSGGQYQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHVPDVY VL VAGIS E + + NLF+R I ++SG FQP LG L+AAG
Sbjct: 64 VVIGNHVPDVYAEVLTVAGISDEVEEEV---SSSSNLFNRLIDILSGCFQPFLGALAAAG 120
Query: 125 MIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+KG+ A+ L + G Y++LN GD +F F+P+IL TAAK+F +N L IG
Sbjct: 121 MVKGLNALFLFLKFYTEGSGTYIMLNGIGDAIFYFMPVILGYTAAKKFHLNPMVGLVIGA 180
Query: 184 ALVYPNI-AASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
AL YP + A+ + P + + + P + TF G+P + SSY S+V+PVI +
Sbjct: 181 ALCYPTVQGAALQSGFPDGSPAPYSLLGLPAYETFLGIPWV--GSSYTSSVVPVIFIIAF 238
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+++K KK IP VV+ F+VPF LLI +P FL+IGP++S +DL+ F + DFSP
Sbjct: 239 AGQVQKIAKKWIPAVVQTFLVPFSVLLIALPAGFLIIGPIVSILTDLLSTGFQALMDFSP 298
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMMR 361
+YG VLG WQVLV+FGLHW ++PLAI++L Q G +LV FAQ +L + +
Sbjct: 299 AVYGAVLGFLWQVLVIFGLHWSIIPLAIMQLAQNGWSQMLVGVYGASFAQTAVVLAMYFK 358
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K++K++ L +PA IS +FGVTEPAIYGITLP + PFI + I GA++G YL
Sbjct: 359 FKDQKMKALCMPAVISGIFGVTEPAIYGITLPKKKPFIYSMIGGAISGIYLMASGTISYT 418
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
MGG+G+F + ++I +++ + I I V+GF LT KD A
Sbjct: 419 MGGLGIFGVVNYITETDASGMFQAFIGIAIASVIGFSLTFFF----------WKDEAGET 468
Query: 482 DSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGV 541
D+ +++ +++V +P+ G++ L DA FA G +G+G+ I P GEV AP DG
Sbjct: 469 DAIQKKSG----KEIVKTPIQGQIAPLNAAKDAAFAQGTLGRGILIYPEKGEVRAPFDGT 524
Query: 542 IRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDT 601
+ LFPT HAIG+ ++ G ELLIHVG+DTV L+GK F + V QG +VK+G LLL FD
Sbjct: 525 VMTLFPTKHAIGMVSETGLELLIHVGLDTVQLEGKYFESLVQQGERVKQGDLLLRFDKKK 584
Query: 602 IKEAGYPVTTPIIVTNTANYKQI 624
I++ GY + TP+IVTN +Y I
Sbjct: 585 IEKEGYSLETPVIVTNYTDYLDI 607
>gi|29377084|ref|NP_816238.1| PTS system, beta-glucoside-specific IIABC component [Enterococcus
faecalis V583]
gi|29344550|gb|AAO82308.1| PTS system, beta-glucoside-specific IIABC component [Enterococcus
faecalis V583]
Length = 626
Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats.
Identities = 276/643 (42%), Positives = 404/643 (62%), Gaps = 28/643 (4%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVV 66
E+A ++ VGG+ N+ +VHC TRLRF LKDE+KADT L V+ VV++ GQYQVV
Sbjct: 6 EIAARVLKAVGGEGNVNSVVHCATRLRFKLKDENKADTAALNADPDVIQVVQSAGQYQVV 65
Query: 67 IGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMI 126
IG+HV DVY+ ++ +G+ + D + GN+F+R I ++S +F P LG ++ AG++
Sbjct: 66 IGSHVSDVYKDLMANSGLGNDS--DNREKESGGNIFNRLIDIISSIFTPFLGAMAGAGVL 123
Query: 127 KGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFAL 185
KG + + +G +A T G Y+VL + DGLF FLP++LA TAAK+F N F A+A+ AL
Sbjct: 124 KGFLTLAVTMGWLADTSGVYLVLFSIADGLFTFLPIMLAFTAAKKFNTNPFLAVALAMAL 183
Query: 186 VYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGAK 245
V+P+I A AG I +F GLP+I S Y S+VLP+I AV+A +
Sbjct: 184 VHPSITA-----------LAGKTI------SFAGLPVIIGPSGYTSSVLPIILAVFAQSY 226
Query: 246 IEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVLY 305
+E+ FKK+IP +++ VP LI P+ FL IGP+ + D +G + IY FSP++
Sbjct: 227 VERFFKKVIPSFLQIICVPLAVFLIMAPVTFLAIGPIGTVIGDWLGQGYNAIYAFSPIIA 286
Query: 306 GIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAICFAQAGALLNIMMRTKEE 365
G+++G+ WQVLVMFG+HWG VP+ +L L +G ++ + AQ GA L + TK
Sbjct: 287 GLLMGSLWQVLVMFGMHWGFVPIMMLNLTQGGDTMVPMLLPAVIAQGGAALAVFFLTKNV 346
Query: 366 KVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGM 425
K++ L++ + I+ +FG+TEP +YG+TLP++ PFI CI G + GA++A VK G +
Sbjct: 347 KLKGLALSSSITTIFGITEPTVYGVTLPLKKPFIAACIGGGIGGAFVAMNHVKNFTFGLV 406
Query: 426 GLFAIPSFI--EASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
+ ++P FI E ++ +I I F++ F LT +++ + P+ + A E ++
Sbjct: 407 SMLSLPGFIPAETKDTAPMITGAIGAGIAFIIAFVLTFVLRFED---QPNPETATEKTET 463
Query: 484 EKERVSAGITEQ---VVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+K ++ ++ SPL GE++ LE D VFASGA+GKGVAIEP+ G++ APADG
Sbjct: 464 DKMVAPVKTNQEDKIILASPLQGEILPLEKVQDPVFASGALGKGVAIEPTEGKLYAPADG 523
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I LFPT HA+GL T +G ELL+H+GMDTV LDGKGF V QG VKKG LL++FDI
Sbjct: 524 EITTLFPTGHAVGLTTTEGVELLMHIGMDTVELDGKGFELSVKQGDSVKKGDLLVTFDIA 583
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
IKEAGYPV TPI+VTNT +Y + + + ++ G L + K
Sbjct: 584 AIKEAGYPVVTPIVVTNTNDYLDVLDMNQTDVLHGEDFLAIIK 626
>gi|58337744|ref|YP_194329.1| PTS enzyme IIABC [Lactobacillus acidophilus NCFM]
gi|58255061|gb|AAV43298.1| PTS enzyme IIABC [Lactobacillus acidophilus NCFM]
Length = 734
Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats.
Identities = 265/639 (41%), Positives = 377/639 (58%), Gaps = 34/639 (5%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVV 66
+LA+ IV VGGK+N+ L+HCVTRLRF LKDESKAD + + GV+ V AGGQYQV+
Sbjct: 106 QLAEQIVKLVGGKENVNSLIHCVTRLRFKLKDESKADDEAIKNLHGVMGVAHAGGQYQVI 165
Query: 67 IGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMI 126
IGN+V D+Y+ V+ + G+S E V DD+ EGN+F R +AL+S LF P+LG ++ AGM+
Sbjct: 166 IGNNVTDIYDQVMPLLGLSSEQEVTQDDEK-EGNIFSRLVALISSLFMPLLGVMTGAGML 224
Query: 127 KGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFAL 185
KG++ + LG V + G Y++LNAA D LF FLP++L TA K FK+N F G AL
Sbjct: 225 KGLLVLFGVLGWVKQGTGTYMILNAAADALFYFLPILLGFTAGKTFKINPFVGAVTGGAL 284
Query: 186 VYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGAK 245
VYP++ A+ TA K + TF G+P+ +Y T+LP++ A+W +
Sbjct: 285 VYPSMVAAATAHKAI---------------TFLGIPVNL--MNYSQTMLPIVIAIWGMSW 327
Query: 246 IEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVLY 305
+EKG KKIIP V+ VP L+I VPLA+++IGP+M S + IY PV
Sbjct: 328 LEKGTKKIIPSSVRNLFVPLLDLMIVVPLAYIIIGPIMQTLSQWLSEASLWIYGILPVAA 387
Query: 306 GIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC--FAQAGALLNIMMRTK 363
G ++G WQ V+ GLHW +P+ + L + I C F Q GA + ++ K
Sbjct: 388 GFIIGGIWQGAVILGLHWAFIPVLMNNLMTN-HFDPINGIMYCTLFGQVGACFAMGLKAK 446
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
++ ++++IPA IS L G+TEP IYG+TLP + F + A GA A M M
Sbjct: 447 DKNFKEIAIPAAISGLVGITEPIIYGVTLPHKKAFAFASVGSAFGGAIAAACHAGMYTMP 506
Query: 424 GMGLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLD 482
G G+F IP+FI +M FLI+++ V+ F LT + + P K +
Sbjct: 507 GGGIFGIPAFINPKGINMQFYGFLISLLVAIVVSFVLTMIFGDTVVPSAPKAKVQVKK-- 564
Query: 483 SEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVI 542
A +Q + SPL G VV L+D D VF++G +GKG+A++P+ EV AP DG +
Sbjct: 565 -------AEFKDQAIYSPLEGTVVELKDVKDPVFSAGTIGKGIAVKPTNNEVRAPFDGKV 617
Query: 543 RLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTI 602
+FPT HAIGL +++G ELLIH+G+DTV L GK F + V G ++KKG L+ FD+ I
Sbjct: 618 ISVFPTKHAIGLKSENGVELLIHLGIDTVNLQGKYFDSMVKDGQEIKKGDLIEKFDVQAI 677
Query: 603 KEAGYPVTTPIIVTNTANYKQI--EVLAKGEIQLGNQLL 639
+EAGY PI+VTN+ N+ + E ++ G+QLL
Sbjct: 678 QEAGYDTVVPIVVTNSNNFDDVISEKKNGDKVNFGDQLL 716
>gi|146312382|ref|YP_001177456.1| PTS system, beta-glucoside-specific IIABC subunit [Enterobacter sp.
638]
gi|145319258|gb|ABP61405.1| PTS system, beta-glucoside-specific IIABC subunit [Enterobacter sp.
638]
Length = 619
Score = 461 bits (1185), Expect = e-128, Method: Composition-based stats.
Identities = 270/641 (42%), Positives = 385/641 (60%), Gaps = 29/641 (4%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y LAKDI+AHVGGK+NI LVHC TRLRF LK+ KAD L + GV+ VV++GGQ+
Sbjct: 2 EYQALAKDILAHVGGKENIVSLVHCATRLRFKLKENQKADAQGLKQNPGVIMVVESGGQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QVVIGNHV DV++ V AG++ + V +D+ +GNL R I +VSG+F P LG L+A+
Sbjct: 62 QVVIGNHVHDVWQAVRAEAGLTDDTPVASDEQGDKGNLLGRLIDIVSGIFTPFLGVLAAS 121
Query: 124 GMIKGVVAIMAALGVAKTD-GAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
G++KG++A+ G TD G Y + AA D LF F PL+L TA K+F N F + IG
Sbjct: 122 GILKGLLALAVVCGWLSTDSGTYKIWFAASDALFFFFPLVLGYTAGKKFGGNPFITMVIG 181
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
AL +P + +F A + + + F G+P+ + +Y S+V+P+I A W
Sbjct: 182 GALTHPMMIQAFEASQQV----------GAVSEAFMGIPVTW--FNYSSSVIPIILAAWV 229
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+EK +++P +K F P L++TVPL FL+IGPV +W S L+ + IY +P
Sbjct: 230 SCWLEKQSSRLLPPSMKNFFAPLICLVVTVPLTFLIIGPVATWLSQLLANGYQWIYVLAP 289
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMR 361
L G +GA WQV V+FGLHWGLVPL I L G +L + Q GA L I +R
Sbjct: 290 WLAGAAMGALWQVCVIFGLHWGLVPLMINNLAVLGHDSMLPMLLPAVMGQVGAALGIFLR 349
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
TK+ + + L+ + + +FG+TEPA+YG+ LP+R PFI C++GA+ GA + F D +
Sbjct: 350 TKDARQKMLAGSSVTAGIFGITEPAVYGVNLPLRRPFIFGCVAGAVGGAIVGFSDTHVYS 409
Query: 422 MGGMGLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
G +F + I + TL +I + VL +T + IP+ AA+
Sbjct: 410 FGFANIFTVAQMIPPGGVNATLWGGIIGTLVALVLSCVMTLVAGIPD--------GAAQ- 460
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+++ ++AG E V +P++G V+AL+ PD FASG +G+GVAI PS V+AP G
Sbjct: 461 ---DEQVITAGKDE--VLAPMSGTVLALDQVPDTTFASGLLGQGVAIIPSDNRVIAPFAG 515
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
+ LF T HAIGL ++ G E+LIHVG+DTV LDGK FTAHV G KV+ G LLL FD
Sbjct: 516 EVASLFQTKHAIGLLSESGIEVLIHVGIDTVKLDGKPFTAHVTVGDKVQPGDLLLEFDRQ 575
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
I +AGY + TPII++N+ +Y+ + +A + G LL +
Sbjct: 576 AIIDAGYDLATPIIISNSDDYRDVVTVAATSVSAGTPLLNV 616
>gi|15612859|ref|NP_241162.1| PTS system, beta-glucoside-specific enzyme II, ABC component
[Bacillus halodurans C-125]
gi|10172909|dbj|BAB04015.1| PTS system, beta-glucoside-specific enzyme II, ABC component
[Bacillus halodurans C-125]
Length = 630
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 258/648 (39%), Positives = 396/648 (61%), Gaps = 27/648 (4%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y ++AK I+ HVGG++N+ LVHC TRLRFSL D SKAD + L+K DGV+ V + GGQ+
Sbjct: 2 NYEQVAKQIIDHVGGEENVKSLVHCATRLRFSLIDHSKADKEQLLKTDGVIAVKENGGQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGE--GSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLS 121
QVVIGN VP+VY + K++ I + + D GN R I +V+ +F P+LG ++
Sbjct: 62 QVVIGNRVPEVYAAIGKISTILDDTTSTKKGGDTGNSGNFVSRLIDVVASIFTPLLGVMA 121
Query: 122 AAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
AG++KG++AI +G + + Y++L+AA D +F FLP++LA+TAA++F+ N F A
Sbjct: 122 GAGILKGLLAIATNVGWLDSGETTYIILHAASDSMFYFLPILLAVTAARKFETNPFGAAT 181
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
I AL+YP+I +S I TFFG+P++ +Y STV P++ AV
Sbjct: 182 IAGALIYPSIVELH---------------DSAIDVTFFGIPVVL--MNYTSTVFPILLAV 224
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
+A + +EK K I + VK F+ P L++ VP+ +++GP+ + + + ++ I+ F
Sbjct: 225 FAMSYVEKFCNKKIHEAVKNFVTPLILLVVIVPVTLIILGPIGVYLGNGIASVIQEIFTF 284
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALLNIM 359
SPVL G ++ WQVLV+FG+HWG++P+ + L +G VI + F+QAGA L +M
Sbjct: 285 SPVLAGAIVAGIWQVLVIFGIHWGIIPIILNNLSVRGEDVIKAVAAPAVFSQAGAALGVM 344
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
+RTK +K++ L+ I+ALFG+TEPA+YG+TLP++ PFIM IS A+ GA + +
Sbjct: 345 LRTKNKKLKALAGSTSITALFGITEPAVYGVTLPLKKPFIMAVISAAVGGAIVGHYGSVA 404
Query: 420 QVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGG----PSEK 475
G GL IP F + + F+IAI+ +FVL LT ++ + +E
Sbjct: 405 VAPGAPGLLTIPIFY-PEDGRGFVAFVIAIIISFVLAAVLTYIVGFKDPVDDEDTLSNES 463
Query: 476 DAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVV 535
+ + E ++ +E++ SPL GEVV L + D VF+SGAMGKGVA+ P G +V
Sbjct: 464 GSENEVKREDDKKEPSASEEI-KSPLKGEVVPLTEVQDHVFSSGAMGKGVAVRPKEGRLV 522
Query: 536 APADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLL 595
AP +G + LF T HAIG+ +D+G E+ IHVG+DTV L G+ FT+ + QG +V G +LL
Sbjct: 523 APINGTVTSLFETKHAIGITSDNGTEIFIHVGIDTVQLKGEHFTSFIEQGDEVAAGDVLL 582
Query: 596 SFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
FD++ I AGY V TP+++TN + ++ K E+ + L+ + K
Sbjct: 583 EFDVERITAAGYDVITPVLITNAKQFSNVQTTDKREVTSEDLLIHVIK 630
>gi|50120800|ref|YP_049967.1| PTS system, beta-glucoside-specific IIABC component [Erwinia
carotovora subsp. atroseptica SCRI1043]
gi|49611326|emb|CAG74773.1| PTS system, beta-glucoside-specific IIABC component [Erwinia
carotovora subsp. atroseptica SCRI1043]
Length = 633
Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 262/656 (39%), Positives = 387/656 (58%), Gaps = 44/656 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y LA +I+ VGG+ NI ++HC TRLRF LKD KAD L GV+ VV++GGQ+
Sbjct: 2 EYKALASEILDGVGGRGNIISVMHCATRLRFKLKDSKKADAAALKNNSGVIMVVESGGQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGIS--GEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLS 121
QVV+GNHV DVY ++L V+G++ + + + D +GN+F RFI ++SG+F P++G ++
Sbjct: 62 QVVVGNHVSDVYRSLLDVSGLTDQSDSANHEEGDEKKGNVFSRFIDIISGIFTPLIGVMA 121
Query: 122 AAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
A+G++KG +A+ A G + +T G Y VL AA D LF F P++L TA K+F N F +
Sbjct: 122 ASGILKGFLALSLACGWMVETSGTYKVLFAASDALFFFFPIVLGYTAGKKFGGNPFVTMV 181
Query: 181 IGFALVYPNIAASF-----TAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLP 235
IG LV+P++ A F T + LY F G+PI F +Y S+V+P
Sbjct: 182 IGATLVHPSMIAEFGAMQNTGYQQLY---------------FLGIPITF--INYASSVIP 224
Query: 236 VIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFT 295
+I + W +++EK I+ ++ F P L ITVP+ FL+IGP +W ++ + +
Sbjct: 225 IIFSAWLASRLEKPLNAILHINIRNFFTPLLCLCITVPVTFLLIGPAATWLGHMLASGYQ 284
Query: 296 GIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGA 354
IY + + G ++GA WQV V+FGLHWGL PL I L G ++ + QAGA
Sbjct: 285 LIYGLNSTIAGALMGALWQVFVIFGLHWGLTPLMINNLSVLGHDTMMPLLVPAVLGQAGA 344
Query: 355 LLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAF 414
+L +++RT++ K++ +S AF +A+FG+TEPA+YG+TLP++ PFI C+ GA+ A L +
Sbjct: 345 VLGVLLRTRDMKLKGISGSAFSAAIFGITEPAVYGVTLPLKRPFIFGCVGGAMGAAILGY 404
Query: 415 FDVKMQVMGGMGLFAIPSFIEAS---NSM------TLIHFLIAIVANFVLGFGLTQLIKI 465
F + G +F I + N++ T I F A VA + G +
Sbjct: 405 FHTTIYSFGFPSIFTFTQVIPPTGVDNTVWAAIIGTAIAFTFAAVATWAFGIPAQENTAA 464
Query: 466 PNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGV 525
N P+ A ++ R +Q +TSP+ G V+ L+ D FASG MGKG+
Sbjct: 465 IN---APTAAPQATQNPNDATR------KQAITSPIEGTVLTLDQVGDETFASGLMGKGI 515
Query: 526 AIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQG 585
AI+P G VV+P +G + LF TNHAIGL +++GAE+LIHVG+DTV LDG+ FTAH+ G
Sbjct: 516 AIKPLAGRVVSPVNGTVASLFKTNHAIGLESEEGAEVLIHVGIDTVKLDGQYFTAHIKTG 575
Query: 586 SKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
VK+G LL+ FD I++AGY TTP+I+TN+ NY + A +Q LL L
Sbjct: 576 DIVKQGDLLVEFDYQAIEKAGYDTTTPVIITNSENYVDVLPTAGNTVQEQGALLTL 631
>gi|45181608|gb|AAS55458.1| BglP [Pectobacterium carotovorum subsp. carotovorum]
Length = 633
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 257/656 (39%), Positives = 385/656 (58%), Gaps = 44/656 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y LA +I+ VGG+ N+ ++HC TRLRF LKD KAD L GV+ VV++GGQ+
Sbjct: 2 EYKALASEILDGVGGRGNVISVMHCATRLRFKLKDNKKADAATLKDNSGVIMVVESGGQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVE--GNLFDRFIALVSGLFQPMLGTLS 121
QVV+GNHV DVY ++L ++G++ +D E GN+F RFI ++SG+F P++G ++
Sbjct: 62 QVVVGNHVSDVYNSLLDISGLTDRTDSANHEDGEEKKGNIFSRFIDIISGIFTPLIGVMA 121
Query: 122 AAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
A+G++KG +A+ A G + +T G Y VL AA D LF F P++L TA K+F N F +
Sbjct: 122 ASGILKGFLALSLACGWMVETSGTYKVLFAASDALFFFFPVVLGYTAGKKFGGNPFVTMV 181
Query: 181 IGFALVYPNIAASF-----TAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLP 235
IG LV+P++ + F T + LY F G+PI F +Y S+V+P
Sbjct: 182 IGATLVHPSMISEFGAMQNTGYQQLY---------------FLGIPITF--INYASSVIP 224
Query: 236 VIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFT 295
+I + W +++EK I+ ++ F P L ITVP+ FL+IGP +W ++ + +
Sbjct: 225 IIFSAWLASRLEKPLNAILHINIRNFFTPLLCLCITVPVTFLLIGPAATWLGHMLASGYQ 284
Query: 296 GIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGA 354
IY + ++ G ++GA WQV V+FGLHWGL PL I L G ++ + QAGA
Sbjct: 285 LIYGLNSMIAGALMGALWQVFVIFGLHWGLTPLMINNLSVLGHDTMMPLLVPAVLGQAGA 344
Query: 355 LLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAF 414
+L +++RT++ K++ +S AF +A+FG+TEPA+YG+TLP++ PFI C+ GA+ A L +
Sbjct: 345 VLGVLLRTRDMKLKGISGSAFSAAIFGITEPAVYGVTLPLKRPFIFGCVGGAMGAAILGY 404
Query: 415 FDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPS- 473
F + G +F I + + I G + +P GPS
Sbjct: 405 FHTTIYSFGFPSIFTFTQVIPPTGVDNTVWAAI---------IGTVIALPLPPPRVGPSG 455
Query: 474 --EKDAAESLDSEKE------RVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGV 525
++A + +++ R S +Q ++SP+AG V+ LE D FASG MGKG+
Sbjct: 456 IPSQEATKEINTSTATPQAIPRQSDTTRKQEISSPIAGTVLPLEQVGDETFASGLMGKGI 515
Query: 526 AIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQG 585
AI+P G VV+P G + LF TNHAIGL +++GAE+LIHVG+DTV LDG+ FTAH+ G
Sbjct: 516 AIKPQAGRVVSPVSGTVASLFKTNHAIGLESEEGAEVLIHVGIDTVKLDGQYFTAHIKTG 575
Query: 586 SKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
VK+G LL+ FD I++AGY TTP+I+TN+ +Y + A +Q LL L
Sbjct: 576 DVVKQGDLLVEFDYQAIEKAGYDTTTPVIITNSXDYVDVLPTAGDTVQEQGTLLTL 631
>gi|131487|sp|P26207|PTV3B_ERWCH PTS system beta-glucoside-specific EIIBCA component (EIIBCA-Bgl)
(EII-Bgl) [Includes: Beta-glucoside-specific
phosphotransferase enzyme IIB component (PTS system
beta-glucoside-specific EIIB component); Beta-glucoside
permease IIC component (PTS system
beta-glucoside-specific EIIC component);
Beta-glucoside-specific phosphotransferase enzyme IIA
component (PTS system beta-glucoside-specific EIIA
component)]
gi|148387|gb|AAA24814.1| beta-glucoside permease
Length = 631
Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 256/647 (39%), Positives = 386/647 (59%), Gaps = 28/647 (4%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y LA +I VGG++NI ++HC TRLRF L+D + A+ D L G++ VV++GGQ+
Sbjct: 2 NYETLASEIRDGVGGQENIISVIHCATRLRFKLRDNTNANADALKNNPGIIMVVESGGQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QVV+GN V DVY+ +L + G++ A ++ + +LF FI ++S +F P +G ++A
Sbjct: 62 QVVVGNQVADVYQALLSLDGMARFSDSAAPEEEKKNSLFSGFIDIISSIFTPFVGVMAAT 121
Query: 124 GMIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
G++KG +A+ A V +++ G Y +L AA D LF F P++L TA K+F N FT L IG
Sbjct: 122 GILKGFLALGVATHVISESSGTYKLLFAASDALFYFFPIVLGYTAGKKFGGNPFTTLVIG 181
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFST--FFGLPIIFPASSYLSTVLPVIAAV 240
LV+P++ A+F A +++P ST F G+PI F +Y S+V+P++ A
Sbjct: 182 ATLVHPSMIAAFNA------------MQAPDHSTLHFLGIPITF--INYSSSVIPILFAS 227
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
W K+EK + + ++ F P ++I+VPL FL+IGP +W S ++ + +Y
Sbjct: 228 WVSCKLEKPLNRWLHANIRNFFTPLLCIVISVPLTFLLIGPSATWLSQMLAGGYQWLYGL 287
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIM 359
+ +L G V+GA WQV V+FGLHWG VPL + G +L + QAGA L ++
Sbjct: 288 NSLLAGAVMGALWQVCVIFGLHWGFVPLMLNNFSVIGHDTLLPLLVPAVLGQAGATLGVL 347
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
+RT++ K + ++ AF +A+FG+TEPA+YG+TLP+R PFI CI GAL A + + M
Sbjct: 348 LRTQDLKRKGIAGSAFSAAIFGITEPAVYGVTLPLRRPFIFGCIGGALGAAVMGYAHTTM 407
Query: 420 QVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
G +F+ I + + + A V +L F L FG P ++
Sbjct: 408 YSFGFPSIFSFTQVIPPTGVDSSVW---AAVIGTLLAFAFAALTSWS--FGVPKDETQPA 462
Query: 480 SLDS-----EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEV 534
+ DS E + + + ++ + SPLAGEV+ LE D FASG MGKG+AI P+ G +
Sbjct: 463 AADSPAVLAETQANAGAVRDETLFSPLAGEVLLLEQVADRTFASGVMGKGIAIRPTQGRL 522
Query: 535 VAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLL 594
AP DG + LF T+HAIGLA+ GAE+LIHVG+DTV LDG+ FT HV G V++G LL
Sbjct: 523 YAPVDGTVASLFKTHHAIGLASRGGAEVLIHVGIDTVRLDGRYFTPHVRVGDVVRQGDLL 582
Query: 595 LSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
L FD I+ AGY +TTPI++TN+ +Y+ +E +A G++ L +L
Sbjct: 583 LEFDGPAIEAAGYDLTTPIVITNSEDYRGVEPVASGKVDANAPLTQL 629
>gi|77979132|ref|ZP_00834553.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Yersinia
intermedia ATCC 29909]
Length = 629
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 266/633 (42%), Positives = 385/633 (60%), Gaps = 38/633 (6%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
YT +A +I+A VGG+ NI +VHC TRLRF LKD ++AD L GV+ VV++GGQ+Q
Sbjct: 3 YTTVASEILAGVGGQSNINSVVHCATRLRFKLKDTARADAQALKDNPGVIMVVESGGQFQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIGNHV +VY+ ++ AG++ D+ + ++F I ++SG+F P+LG L+A+G
Sbjct: 63 VVIGNHVSEVYQALVNQAGLADAEEHDSKSGNSKESVFSHCIDIISGIFTPLLGVLAASG 122
Query: 125 MIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
++KG +A+ G + G+Y +L AA D LF F PL+L TA K+F N F +AIG
Sbjct: 123 ILKGFLALSIVCGWLQPNSGSYTILFAASDSLFYFFPLVLGYTAGKKFGGNPFITMAIGG 182
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
ALV+P + A+F A AG P S ++ F G+PI F +Y S+V+P+I A W
Sbjct: 183 ALVHPLMLAAFNA--------AGQPGASEVY--FLGIPITF--INYSSSVIPIILAAWVS 230
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
+++EKGF +++ +K F P L+ITVP FL+IGP+ +W S L+ + F IY +P
Sbjct: 231 SRLEKGFNRVLHSNIKNFFTPLLCLVITVPATFLLIGPLATWLSHLLASGFQIIYSAAPP 290
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRT 362
+ G VL WQ+ V+FGLHWGLVPL I L G +L + Q GA L + +RT
Sbjct: 291 VAGGVLAGLWQICVIFGLHWGLVPLMINNLSVLGYDAMLPLLLPAVMGQVGATLGVFLRT 350
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
++ K++ L+ AF + +FG+TEPA+YG+TLP + PF+ C+ GA+ G + F +
Sbjct: 351 RDAKMKVLAGSAFTAGIFGITEPAVYGVTLPSKKPFVFGCVGGAIGGVIVGFCQTHVYSF 410
Query: 423 GGMGLFAIPSFI-----EASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDA 477
G +F+ I +AS +I LIA++ + F FG P+
Sbjct: 411 GLASIFSFAQIIPATGVDASVWGAIIGTLIALIFAAISTF----------FFGLPAPVVT 460
Query: 478 AESLDSEKERVSAGITE------QVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSV 531
AE+ D S+ IT+ +V+ SP++GE++AL D D +FASG +G G+AI P
Sbjct: 461 AETEDLSH---SSSITDNHSGLGEVIFSPISGELLALADVSDNIFASGLLGAGIAIIPQQ 517
Query: 532 GEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKG 591
G VV+P +GV+ LF T+HAIG+ +D GAE+LIHVG+DTV LDGK FTAHV G +V G
Sbjct: 518 GRVVSPVNGVVASLFKTHHAIGIESDSGAEILIHVGIDTVKLDGKYFTAHVKAGDRVNAG 577
Query: 592 QLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQI 624
LLL FD I AGY +TTPII++N+ NY+ +
Sbjct: 578 DLLLEFDCTAITGAGYDLTTPIIISNSENYQDV 610
>gi|52082481|ref|YP_081272.1| phosphotransferase system (PTS) beta-glucoside-specific enzyme
IIBCA component [Bacillus licheniformis ATCC 14580]
gi|52787877|ref|YP_093706.1| hypothetical protein BLi04200 [Bacillus licheniformis ATCC 14580]
gi|52005692|gb|AAU25634.1| phosphotransferase system (PTS) beta-glucoside-specific enzyme
IIBCA component [Bacillus licheniformis ATCC 14580]
gi|52350379|gb|AAU43013.1| hypothetical protein BLi04200 [Bacillus licheniformis DSM 13]
Length = 619
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 260/619 (42%), Positives = 377/619 (60%), Gaps = 36/619 (5%)
Query: 8 LAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVI 67
+AK+I+A VGG+ N+ LVHC TRLRF LKD SKAD + L DGVVTVV++GGQ+QVVI
Sbjct: 6 MAKEILARVGGEKNVVSLVHCATRLRFKLKDRSKADREALENTDGVVTVVESGGQFQVVI 65
Query: 68 GNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMIK 127
GN+VP+VY+ + +++ + + D +G+L R + +VS +F P+LG ++ AG++K
Sbjct: 66 GNNVPEVYKEIGRISQLLESSAADHSQKE-KGSLAGRLVDVVSSIFTPLLGVMAGAGILK 124
Query: 128 GVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFALV 186
G++ I G ++ + Y +L AA D LF FLPL+LA+TAAK+F N F AL I AL+
Sbjct: 125 GLLLICTNAGWLSPEETTYTILYAAADSLFYFLPLLLAVTAAKKFGANPFIALTIAGALI 184
Query: 187 YPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGAKI 246
YP I L +G E FFG+P++ +Y STV+P+I AV+ + +
Sbjct: 185 YPTI---------LELKNSGAHTE------FFGIPVVL--MNYTSTVIPIILAVFVMSYL 227
Query: 247 EKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVLYG 306
E+ + I + VK FI P L + VPL +V GP+ + + + A ++DFSP+L G
Sbjct: 228 ERLCMRFIHESVKNFITPLLCLTVMVPLTLIVFGPLGVYTGNGIAAAILSVFDFSPILAG 287
Query: 307 IVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALLNIMMRTKEE 365
++ A WQ+LV+FG+HWG+VP+ + + G I A+ A FAQ GA +M++TK +
Sbjct: 288 AIIAALWQILVIFGIHWGIVPVILNNIAVHGKDYIKPATAAAVFAQTGAAFGVMLKTKNK 347
Query: 366 KVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGM 425
K++ L+ A ++ +FG+TEPA+YG+TL ++ PF+ IS A GA + + G
Sbjct: 348 KLKALAGSAAVTGIFGITEPAVYGVTLRLKKPFVCGVISAAAGGAIIGYSGSVALASGAP 407
Query: 426 GLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDSEK 485
GL IP F + F+I I +FVL LT ++ F P E E ++
Sbjct: 408 GLLTIPIFYGPG----FLGFIIGISVSFVLSILLTYIVG----FDDPVEVTKEEPVEK-- 457
Query: 486 ERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLL 545
SAG + + SPL GEV+ L + D VFASGA+G+G+A+ PS G V APADG++
Sbjct: 458 ---SAG---EPIYSPLQGEVLPLTEVSDKVFASGALGEGIAVVPSKGVVTAPADGIVTTA 511
Query: 546 FPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEA 605
FPT HA G+ T+ GAE+LIH+GMDTV L+GK F VQG VK+G +L FD+D +KE
Sbjct: 512 FPTGHAYGITTESGAEILIHIGMDTVRLEGKHFNPKAVQGQNVKRGDILAEFDLDALKEE 571
Query: 606 GYPVTTPIIVTNTANYKQI 624
G+ V TPIIVTN+ Y +
Sbjct: 572 GFDVKTPIIVTNSGQYTDV 590
>gi|50119609|ref|YP_048776.1| PTS system, beta-glucoside-specific IIabc component [Erwinia
carotovora subsp. atroseptica SCRI1043]
gi|49610135|emb|CAG73575.1| PTS system, beta-glucoside-specific IIabc component [Erwinia
carotovora subsp. atroseptica SCRI1043]
Length = 638
Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 265/647 (40%), Positives = 393/647 (60%), Gaps = 30/647 (4%)
Query: 8 LAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVI 67
LA++I+ VGG+ N++ LVHC TRLRF + D K D L +GV+TV+ A GQ QVVI
Sbjct: 6 LAENILELVGGETNVSTLVHCATRLRFKIVDHGKVDVAALEALEGVITVINASGQLQVVI 65
Query: 68 GNHVPDVYETVLKVAGI--SGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
GN VP+VY ++ + G+G + + R I LV+G+F P+LG ++AAG+
Sbjct: 66 GNRVPEVYRAFGPISTLLEDGDGKRQTAESDQSTSAMGRLIDLVAGIFTPLLGAMAAAGV 125
Query: 126 IKGVVAIMAALGVAKT-DGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KGV+AI+ ALG T + YV+L+AA D LF FLP++LAITAA++F+ N F A++I A
Sbjct: 126 LKGVLAIVIALGWLNTKESTYVILHAASDSLFYFLPMLLAITAARKFETNIFVAVSIAGA 185
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LVYP I F A +P+ TFFGLP++ Y S+V+P+I +VW +
Sbjct: 186 LVYPTIQGLFDAGQPV---------------TFFGLPVVM--MKYTSSVIPIIFSVWLMS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
IE+ + I + V+ + PFF L++ VPL + IGP+ AS L+ ++F IY+F+P++
Sbjct: 229 YIERFLNRHIHESVRNILTPFFLLVLMVPLTLMTIGPIGISASKLIASVFVNIYEFNPII 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALLNIMMRTK 363
G ++ A+WQ+LV+FG+HWG V + I +L G + AS FAQ+GALL +M+RTK
Sbjct: 289 AGALMAASWQILVIFGVHWGFVTVFINDLSVMGHSYLKAASSPSVFAQSGALLGVMVRTK 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
++K++ L+ FI++LFG+TEP +YG+TL ++ PFI I+ AL GA + + MG
Sbjct: 349 DKKLKALAGSTFIASLFGITEPGVYGVTLKLKKPFICAVIAAALGGAIVGYAKSSAVSMG 408
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVL----GFG--LTQLIKIPNLFGGPSEKDA 477
GL +P F LI IA VA+FVL GF + + K PS A
Sbjct: 409 MPGLLTLPIFYGEGFVGFLIGCAIAFVASFVLTVIVGFDDPVPPVEKASTPPRSPSTTPA 468
Query: 478 AESLDSEKERV---SAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEV 534
A + + A T + + SP GE++ LE+ D VF+SG +G+GVAI P G +
Sbjct: 469 APVVRQNTNSLPLKEAPATAEQLGSPAKGELIPLEEVNDKVFSSGVVGQGVAILPQEGRI 528
Query: 535 VAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLL 594
+P DG+I F + HA+G+ + GAE+LIHVG++TV L+G+ + HV +G KVKKGQLL
Sbjct: 529 YSPVDGMIASTFASGHAVGILSQKGAEILIHVGINTVQLEGQHYQMHVAEGDKVKKGQLL 588
Query: 595 LSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
L FD++ I++AGY TP+++TN Y+ + A + Q G ++ L
Sbjct: 589 LEFDLEAIQKAGYDTVTPMVITNAEEYRVFSLGAARQPQAGETIIVL 635
>gi|69245797|ref|ZP_00603640.1| Sugar-specific permease, EIIA 1 domain:PTS system,
beta-glucoside-specific IIABC component [Enterococcus
faecium DO]
gi|68195592|gb|EAN10033.1| Sugar-specific permease, EIIA 1 domain:PTS system,
beta-glucoside-specific IIABC component [Enterococcus
faecium DO]
Length = 631
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 244/623 (39%), Positives = 379/623 (60%), Gaps = 42/623 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY++LAKDIV VGG++N++ + HC TRLRF+LKD KAD + + + +GV+TVV+AGG +
Sbjct: 29 DYSQLAKDIVRFVGGEENVSNVYHCATRLRFTLKDNKKADKEKVEQLEGVITVVEAGGMF 88
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QVV+GN V +VY+ + K + + S +G + + FI +++ +F P LG L+ +
Sbjct: 89 QVVVGNAVNEVYDVLSKQMKLEDDASSGKRGTEKKG-ILNSFIDMIAAVFAPTLGVLAGS 147
Query: 124 GMIKGVVAIMAALGVAKTD-GAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
G+IKGV+A+ +L + T+ G Y++LNAA D F FLP+ LA TAAK+F ++F A+ I
Sbjct: 148 GLIKGVLALCTSLNLLTTESGTYIILNAAADAFFYFLPIFLAYTAAKKFNTDRFIAMVIA 207
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
ALVYP I ++++ I F G+P+I + Y STV+P I AVW
Sbjct: 208 AALVYPTIVSAYS---------------DSITLRFLGMPVIL--ARYTSTVIPAILAVWV 250
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+ IE +K + + ++ + PF +++ VP+ LV+GP+ +AS L+ A + +Y+FSP
Sbjct: 251 LSYIEPKIRKSLHESIRNLLTPFICIIVMVPIILLVVGPIADYASQLIAAGYLAVYNFSP 310
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALLNIMMR 361
VL G V+G WQVLV+FGLHWGLVP+ L G + A + AQAGA+L + ++
Sbjct: 311 VLSGAVIGGFWQVLVIFGLHWGLVPVMTNNLSFYGRDTLGPACMTAVAAQAGAVLGVFLK 370
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
TK +KV+ LS+ AFI+ALFG+TEPA+YG+TL + PF + CI GA+ G
Sbjct: 371 TKNKKVKSLSLSAFITALFGITEPAVYGVTLKYKRPFYIACICGAIFGGVAGAAGAGALA 430
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
+ + + P +I + + +A++++ +L F LFG E + S
Sbjct: 431 VATRSILSFPIYIGEGFVWLVASYFLAMISSCMLTF----------LFGYKDEIEEESSK 480
Query: 482 DSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGV 541
D V+++P AGE++ L + D FASG++G+G AI P+ G++ + +G
Sbjct: 481 DI------------VLSTPAAGEIIDLSEVNDPTFASGSLGEGFAIIPTDGKIYSSVNGE 528
Query: 542 IRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDT 601
+ +FPT HAIG+ +++GAE+LIH+G+DTV L+GK F + V G KV+KG LL+ D+
Sbjct: 529 VSTVFPTKHAIGVVSEEGAEILIHIGIDTVNLNGKYFQSAVSDGKKVRKGDLLMEVDLQE 588
Query: 602 IKEAGYPVTTPIIVTNTANYKQI 624
+ + GY TT +IVTN++ +K I
Sbjct: 589 LIKEGYDPTTMVIVTNSSRFKNI 611
>gi|26250462|ref|NP_756502.1| PTS system, beta-glucoside-specific IIABC component [Escherichia
coli CFT073]
gi|26110892|gb|AAN83076.1|AE016769_191 PTS system, beta-glucoside-specific IIABC component [Escherichia
coli CFT073]
Length = 649
Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats.
Identities = 258/643 (40%), Positives = 382/643 (59%), Gaps = 29/643 (4%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L K G++ VV++GGQ+QV
Sbjct: 27 TELARTIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQV 86
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ GE + A ++ +GNL +RF+ ++SG+F P++G ++A G+
Sbjct: 87 VIGNHVADVFLAVNSVAGL-GEKAQQAPENDDKGNLLNRFVYVISGIFTPLIGLMAATGI 145
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 146 LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFSGNPFTAMVIGGA 205
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + + L F G+P+ +Y S+V+P+I + W +
Sbjct: 206 LVHPLILTAFENGQKVDALGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 253
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+L+ A + +Y P
Sbjct: 254 ILERRLNAWLPSAIKNFFTPLLCLMVITPITFLLVGPLSTWISELIAAGYLWLYQAVPAF 313
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGL+PL I G ++ + AQ GA L + + +
Sbjct: 314 AGAVMGGFWQIFVMFGLHWGLIPLIINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 373
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + + K+ G
Sbjct: 374 DAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVYSFG 433
Query: 424 GMGLFA----IPSF-IEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
G+F IPS I+ + ++I +IAI FV G + I +++ +A
Sbjct: 434 LPGIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFV-GTVMLHFIT--------AKRQSA 484
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
+ EK + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P
Sbjct: 485 QVAQQEKTPEVITPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAIMPSVGEVRSPV 544
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
G I LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFD
Sbjct: 545 AGRIASLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFD 604
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
I I+EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 605 IPAIREAGFDLTTPVLISNSDDFTDVLPHGTAQINAGEPLLSI 647
>gi|110644063|ref|YP_671793.1| PTS system, beta-glucoside-specific IIABC component [Escherichia
coli 536]
gi|110345655|gb|ABG71892.1| PTS system, beta-glucoside-specific IIABC component [Escherichia
coli 536]
Length = 624
Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 258/643 (40%), Positives = 381/643 (59%), Gaps = 29/643 (4%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L K G++ VV++GGQ+QV
Sbjct: 2 TELARTIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ GE + A ++ +GNL +RF+ ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGL-GEKAQQAPENDDKGNLLNRFVYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFSGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + + L F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFENGQKVDALGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+L+ A + +Y P
Sbjct: 229 ILERRLNAWLPSAIKNFFTPLLCLMVITPITFLLVGPLSTWISELIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGL+PL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHWGLIPLIINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + + K+ G
Sbjct: 349 DAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVYSFG 408
Query: 424 GMGLFA----IPSF-IEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
G+F IPS I+ + ++I +IAI FV G + I ++ +A
Sbjct: 409 LPGIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFV-GTVMFHFIT--------AKSQSA 459
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
+ EK + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P
Sbjct: 460 QVAQQEKTPEVITPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPV 519
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
G I LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFD
Sbjct: 520 AGRIASLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFD 579
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
I I+EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 580 IPAIREAGFDLTTPVLISNSDDFTDVLPHGTAQINAGEPLLSI 622
>gi|75231008|ref|ZP_00717443.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Escherichia coli B7A]
Length = 625
Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 254/638 (39%), Positives = 375/638 (58%), Gaps = 18/638 (2%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L K G++ VV++GGQ+QV
Sbjct: 2 TELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ GE + A ++ +GNL +RF+ ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGL-GEKAQQAPENDEKGNLLNRFVYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + L F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFENGQKADELGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+L+ A + +Y P
Sbjct: 229 ILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISELIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGLVPL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + + K+
Sbjct: 349 DAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVY--- 405
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
GL +I +F++ S + + A V V+ G + + F + A +
Sbjct: 406 SFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPAQGAPQE 465
Query: 484 EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIR 543
+ V + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P G I
Sbjct: 466 KTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIA 525
Query: 544 LLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIK 603
LF T HAIG+ +DDG ELLIHVG+DTV LDGK F+AHV G KV G L+SFDI I+
Sbjct: 526 SLFATLHAIGIESDDGVELLIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIR 585
Query: 604 EAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 586 EAGFDLTTPVLISNSDDFTDVLPHGTAQISAGEPLLSI 623
>gi|56965548|ref|YP_177282.1| PTS system, glucose-specific enzyme II, A component [Bacillus
clausii KSM-K16]
gi|56911794|dbj|BAD66321.1| A component PTS system glucose-specific enzyme II [Bacillus clausii
KSM-K16]
Length = 628
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 266/642 (41%), Positives = 391/642 (60%), Gaps = 27/642 (4%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y LAKDIVA VGG+ N+ LVHC TRLRF+L D +KA+ L +GV+ V ++GGQ
Sbjct: 2 NYESLAKDIVALVGGEKNVKSLVHCATRLRFTLHDHAKANKTKLEHLNGVIAVKESGGQL 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVE--GNLFDRFIALVSGLFQPMLGTLS 121
QVVIGN VP+VY+ + K + I + + + E GN F R I +V+ +F P+LG ++
Sbjct: 62 QVVIGNMVPEVYQAIGKTSSILDDAKKSSASSSEEKKGNPFGRAIDIVASIFAPLLGVMA 121
Query: 122 AAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
AG++KG++ I + +TD YV+L AA D LF FLP++LA+T A++F+ N FTA+
Sbjct: 122 GAGILKGLLLIATNFNWLEQTDSTYVILFAASDALFYFLPVLLAVTTARKFEGNVFTAVT 181
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
I AL+YP+I AE + FFG+P+ +Y STV+P+I +V
Sbjct: 182 IAGALLYPSIIELTNAETSV---------------GFFGIPVTL--MTYSSTVIPIILSV 224
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
+K+EK F K I +K F+ P L+I VPL +V GP+ + + + F
Sbjct: 225 IVMSKLEKLFNKFIHQSIKNFVTPLLLLVIMVPLTLIVFGPIGVNVGNAIADGLLAAFSF 284
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALLNIM 359
SP++ G +LGA+WQ+LV+FG+HWGLVP+ I + G I A+ A FAQ GA L +
Sbjct: 285 SPLIAGAILGASWQLLVIFGVHWGLVPVFINNVAVYGQDGIKPAATASVFAQTGAALGVF 344
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
++TK ++++ L+ + I+ALFG+TEP +YG+TLP++ PFI I GA+ GA + K
Sbjct: 345 LKTKNKRLKALAGSSTITALFGITEPTVYGVTLPLKRPFIAGIIGGAVGGAIIGQAGTKA 404
Query: 420 QVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
G GL +P F ++ I A+FV+ LT ++ F P +++ +
Sbjct: 405 FASGAPGLLTLPIFY-GPGGEGFFGLILGITASFVISCVLTYILG----FKDPVDEEE-Q 458
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ ++ ++ + I ++ + SPL G+VV L + D FAS AMGKG+A++PS G VVAP +
Sbjct: 459 AAETPQQTATEAIADEEILSPLEGKVVPLSEVNDPAFASEAMGKGIAVDPSSGRVVAPVN 518
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G I + F T HAIGL +D GAE+LIHVG+DTV LDGK F++++ QG +VK G LL+ FDI
Sbjct: 519 GKITVAFQTKHAIGLVSDQGAEILIHVGLDTVQLDGKHFSSYIKQGDEVKVGDLLVEFDI 578
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
IKEAGY TPII+TNT NY+ +E + + + LL L
Sbjct: 579 AKIKEAGYQTVTPIIITNTGNYQNVEPVQVESVHEQDTLLSL 620
>gi|83588413|ref|ZP_00927037.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Escherichia coli 101-1]
Length = 625
Score = 431 bits (1107), Expect = e-119, Method: Composition-based stats.
Identities = 253/638 (39%), Positives = 375/638 (58%), Gaps = 18/638 (2%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L K G++ VV++GGQ+QV
Sbjct: 2 TELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ GE + A ++ +GNL +RF+ ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGL-GEKAQQAPENDEKGNLLNRFVYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + L F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFENGQKADALGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+++ A + +Y P
Sbjct: 229 ILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISEMIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGLVPL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + + K+
Sbjct: 349 DAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVY--- 405
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
GL +I +F++ S + + A V V+ G + + F + A +
Sbjct: 406 SFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPAQGAPQE 465
Query: 484 EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIR 543
+ V + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P G I
Sbjct: 466 KTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIA 525
Query: 544 LLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIK 603
LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFDI I+
Sbjct: 526 SLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIR 585
Query: 604 EAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
EAG+ VTTP++++N+ ++ + +I G LL +
Sbjct: 586 EAGFDVTTPVLISNSDDFTDVLPHGTAQISAGEPLLSI 623
>gi|91213245|ref|YP_543231.1| PTS system, beta-glucoside-specific IIABC component [Escherichia
coli UTI89]
gi|91074819|gb|ABE09700.1| PTS system, beta-glucoside-specific IIABC component [Escherichia
coli UTI89]
Length = 649
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 258/643 (40%), Positives = 380/643 (59%), Gaps = 29/643 (4%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L K G++ VV++GGQ+QV
Sbjct: 27 TELARTIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQV 86
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ GE + A ++ + NL +RF ++SG+F P++G ++A G+
Sbjct: 87 VIGNHVADVFLAVNSVAGL-GEKAQQAPENDDKDNLLNRFFYVISGIFTPLIGLMAATGI 145
Query: 126 IKGVVAIMAALGVA-KTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ A + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 146 LKGMLALALTFQWATEQSGTYLILFSASDALFWFFPIILGYTAGKRFSGNPFTAMVIGGA 205
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + + L F G+P+ +Y S+V+P+I + W +
Sbjct: 206 LVHPLILTAFENGQKVDALGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 253
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+L+ A + +Y P
Sbjct: 254 ILERRLNTWLPSAIKNFFTPLLCLMVITPITFLLVGPLSTWISELIAAGYLWLYQAVPAF 313
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGL+PL I G ++ + AQ GA L + + +
Sbjct: 314 AGAVMGGFWQIFVMFGLHWGLIPLIINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 373
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + + K+ G
Sbjct: 374 DAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVYSFG 433
Query: 424 GMGLFA----IPSF-IEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
G+F IPS I+ + ++I +IAI FV G + I +++ A
Sbjct: 434 LPGIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFV-GTVMFHFIT--------AKRQPA 484
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
+ EK + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P
Sbjct: 485 QVAQQEKTPEVITPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPV 544
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
G I LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFD
Sbjct: 545 AGQIASLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFD 604
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
I I+EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 605 IPAIREAGFDLTTPVLISNSDDFTDVLPHGTAQINAGEPLLSI 647
>gi|75188477|ref|ZP_00701744.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Escherichia coli E24377A]
gi|157079382|gb|ABV19090.1| PTS system, beta-glucoside-specific IIABC component [Escherichia
coli E24377A]
Length = 625
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 253/638 (39%), Positives = 374/638 (58%), Gaps = 18/638 (2%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L G++ VV++GGQ+QV
Sbjct: 2 TELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKNTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ GE + A ++ +GNL +RF+ ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGL-GEKAQQAPENDEKGNLLNRFVYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + L F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFENGQKADELGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+L+ A + +Y P
Sbjct: 229 ILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISELIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGLVPL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + + K+
Sbjct: 349 DAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVY--- 405
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
GL +I +F++ S + + A V V+ G + + F + A +
Sbjct: 406 SFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPAQGAPQE 465
Query: 484 EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIR 543
+ V + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P G I
Sbjct: 466 KTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIA 525
Query: 544 LLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIK 603
LF T HAIG+ +DDG ELLIHVG+DTV LDGK F+AHV G KV G L+SFDI I+
Sbjct: 526 SLFATLHAIGIESDDGVELLIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIR 585
Query: 604 EAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 586 EAGFDLTTPVLISNSDDFTDVLPHGTAQISAGEPLLSI 623
>gi|75236451|ref|ZP_00720547.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Escherichia coli E110019]
Length = 625
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 255/639 (39%), Positives = 378/639 (59%), Gaps = 20/639 (3%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L G++ VV++GGQ+QV
Sbjct: 2 TELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKNTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ GE + A ++ +GNL +RF+ ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGL-GEKAQQAPENDEKGNLLNRFVYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + ++P F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFENRQK---------ADAPGLD-FLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+++ A + +Y P
Sbjct: 229 ILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISEMIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGLVPL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + + K+
Sbjct: 349 DAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVY--- 405
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
GL +I +F++ S + + A V V+ G + L S++ A+
Sbjct: 406 SFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCA-FVGTLMLHFITSKRQPAQVAPQ 464
Query: 484 EKERVSAGITEQV-VTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVI 542
EK EQ + SP+ GE+V L D FASG +GKG+AI PSVGEV +P G I
Sbjct: 465 EKTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRI 524
Query: 543 RLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTI 602
LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFDI I
Sbjct: 525 ASLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAI 584
Query: 603 KEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
+EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 585 REAGFDLTTPVLISNSDDFTDVLPHGTAQISAGEPLLSI 623
>gi|74314264|ref|YP_312683.1| PTS system beta-glucoside-specific, enzyme II, cryptic [Shigella
sonnei Ss046]
gi|73857741|gb|AAZ90448.1| PTS system beta-glucoside-specific, enzyme II, cryptic [Shigella
sonnei Ss046]
Length = 625
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 253/638 (39%), Positives = 374/638 (58%), Gaps = 18/638 (2%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L G++ VV++GGQ+QV
Sbjct: 2 TELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKNTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ GE + A ++ +GNL +RF+ ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGL-GEKAQQAPENDEKGNLLNRFVYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + L F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFENGQKADALGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+L+ A + +Y P
Sbjct: 229 ILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISELIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGLVPL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + + K+
Sbjct: 349 DAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVY--- 405
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
GL +I +F++ S + + A V V+ G + + F + A +
Sbjct: 406 SFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPAQGAPQE 465
Query: 484 EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIR 543
+ V + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P G I
Sbjct: 466 KTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIA 525
Query: 544 LLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIK 603
LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFDI I+
Sbjct: 526 SLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIR 585
Query: 604 EAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
EAG+ VTTP++++N+ ++ + +I G LL +
Sbjct: 586 EAGFDVTTPVLISNSDDFTDVLPHGTAQISAGEPLLSI 623
>gi|117625995|ref|YP_859318.1| PTS system, beta-glucoside-specific IIABC component [Escherichia
coli APEC O1]
gi|115515119|gb|ABJ03194.1| PTS system, beta-glucoside-specific IIABC component [Escherichia
coli APEC O1]
Length = 624
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 258/643 (40%), Positives = 380/643 (59%), Gaps = 29/643 (4%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L K G++ VV++GGQ+QV
Sbjct: 2 TELARTIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ GE + A ++ + NL +RF ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGL-GEKAQQAPENDDKDNLLNRFFYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALGVA-KTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ A + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWATEQSGTYLILFSASDALFWFFPIILGYTAGKRFSGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + + L F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFENGQKVDALGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+L+ A + +Y P
Sbjct: 229 ILERRLNTWLPSAIKNFFTPLLCLMVITPITFLLVGPLSTWISELIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGL+PL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHWGLIPLIINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + + K+ G
Sbjct: 349 DAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVYSFG 408
Query: 424 GMGLFA----IPSF-IEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
G+F IPS I+ + ++I +IAI FV G + I +++ A
Sbjct: 409 LPGIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFV-GTVMFHFIT--------AKRQPA 459
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
+ EK + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P
Sbjct: 460 QVAQQEKTPEVITPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPV 519
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
G I LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFD
Sbjct: 520 AGQIASLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFD 579
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
I I+EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 580 IPAIREAGFDLTTPVLISNSDDFTDVLPHGTAQINAGEPLLSI 622
>gi|16131590|ref|NP_418178.1| fused beta-glucoside-specific PTS enzymes: IIA component/IIB
component/IIC component [Escherichia coli K12]
gi|89110285|ref|AP_004065.1| fused beta-glucoside-specific PTS enzyme IIABC components
[Escherichia coli W3110]
gi|124530064|ref|ZP_01700847.1| PTS system, beta-glucoside-specific IIABC subunit [Escherichia coli
B]
gi|131486|sp|P08722|PTV3B_ECOLI PTS system beta-glucoside-specific EIIBCA component (EIIBCA-Bgl)
(EII-Bgl) [Includes: Beta-glucoside-specific
phosphotransferase enzyme IIB component (PTS system
beta-glucoside-specific EIIB component); Beta-glucoside
permease IIC component (PTS system
beta-glucoside-specific EIIC component);
Beta-glucoside-specific phosphotransferase enzyme IIA
component (PTS system beta-glucoside-specific EIIA
component)]
gi|145413|gb|AAA83837.1| bglC gene product
gi|145418|gb|AAA23510.1| transport protein
gi|1790159|gb|AAC76745.1| fused beta-glucoside-specific PTS enzymes: IIA component/IIB
component/IIC component [Escherichia coli K12]
gi|85676316|dbj|BAE77566.1| fused beta-glucoside-specific PTS enzyme IIABC components
[Escherichia coli W3110]
gi|124499469|gb|EAY46957.1| PTS system, beta-glucoside-specific IIABC subunit [Escherichia coli
B]
Length = 625
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 252/638 (39%), Positives = 375/638 (58%), Gaps = 18/638 (2%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L K G++ VV++GGQ+QV
Sbjct: 2 TELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ E + A ++ +GNL +RF+ ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGLD-EKAQQAPENDDKGNLLNRFVYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + L F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFENGQKADALGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+L+ A + +Y P
Sbjct: 229 ILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISELIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGLVPL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A +++LFG+TEPA+YG+ LP + PF++ CISGAL + + K+
Sbjct: 349 DAQKKVVAGSAALTSLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVY--- 405
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
GL +I +F++ S + + A V V+ G + + F + A +
Sbjct: 406 SFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPAQGAPQE 465
Query: 484 EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIR 543
+ V + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P G I
Sbjct: 466 KTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIA 525
Query: 544 LLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIK 603
LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFDI I+
Sbjct: 526 SLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIR 585
Query: 604 EAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 586 EAGFDLTTPVLISNSDDFTDVLPHGTAQISAGEPLLSI 623
>gi|77975589|ref|ZP_00831124.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Yersinia
frederiksenii ATCC 33641]
Length = 629
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 264/632 (41%), Positives = 382/632 (60%), Gaps = 25/632 (3%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
YT +A +I+A VGGK NI +VHC TRLRF LKD S+AD L K GV+ VV++GGQ+Q
Sbjct: 3 YTTVASEILAGVGGKSNINSVVHCATRLRFKLKDSSQADAQALKKNPGVIMVVESGGQFQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISG-EGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
VVIGNHV +VY+ VL+ AG+S E + + + EG L I ++SG+F P+LG ++A+
Sbjct: 63 VVIGNHVSEVYKAVLQQAGLSDLEENGPSKSNQKEG-LLSHCIDIISGIFTPLLGVMAAS 121
Query: 124 GMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
G++KG +A+ G + T G+Y++L AA D LF F PL+L TA K+F N F +AIG
Sbjct: 122 GILKGFLALSLVCGWLQPTSGSYLILFAASDALFYFFPLVLGYTAGKKFGGNPFITMAIG 181
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
ALV+P + A+F AG P ++ F G+P+ F +Y S+V+P+I A W
Sbjct: 182 GALVHPLMLAAFN--------LAGQPGAEVVY--FLGIPVTF--INYTSSVIPIILAAWV 229
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
++EKGF +++ +K F P L ITVP FL+IGP+ +W S L+ F IY +P
Sbjct: 230 SCQLEKGFNRVLHSSIKNFFTPLLCLAITVPATFLLIGPLATWLSHLLATGFQMIYSAAP 289
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMR 361
+ G VL WQ+ V+FGLHWGLVPL I L G + + Q GA L + +R
Sbjct: 290 PVAGGVLAGIWQICVIFGLHWGLVPLMINNLSVLGYDTMAPLLLPAVMGQVGATLGVFLR 349
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
T++ K++ L+ AF + +FG+TEPA+YG+TLP + PF+ CI GA+ G + + +
Sbjct: 350 TRDTKMKALAGSAFTAGIFGITEPAVYGVTLPSKKPFVFGCIGGAIGGVVVGYSQAHIYS 409
Query: 422 MGGMGLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
G + +F+ I AS T+ +I + + T +P P+ +S
Sbjct: 410 FGLVSIFSFAQIIPASGIDATVWGAIIGTLTALIFAAISTYFFGLP----APTATIETDS 465
Query: 481 LDSEKERVS--AGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
L V +G+ E V+ SP++G+++AL D D FASG +G G+AI P G VV+P
Sbjct: 466 LSQTSAIVEDYSGLGE-VILSPISGKLLALTDVSDTTFASGLLGAGMAIIPQSGRVVSPV 524
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
+GV+ LF T+HAIG+ ++ GAE+LIHVG+DTV L+G+ FTAHV G V G LLL FD
Sbjct: 525 NGVVASLFKTHHAIGIESEAGAEILIHVGIDTVKLEGQYFTAHVKAGDLVSAGDLLLEFD 584
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKG 630
I AGY +TTPII++N+ +Y+ + + AKG
Sbjct: 585 CAAITAAGYDLTTPIIISNSEDYQDV-LCAKG 615
>gi|75197618|ref|ZP_00707688.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Escherichia coli HS]
gi|157068882|gb|ABV08137.1| PTS system, beta-glucoside-specific IIABC component [Escherichia
coli HS]
Length = 625
Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 252/638 (39%), Positives = 375/638 (58%), Gaps = 18/638 (2%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L K G++ VV++GGQ+QV
Sbjct: 2 TELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ E + A ++ +GNL +RF+ ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGLD-EKAQQAPENDDKGNLLNRFVYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + L F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFENGQKADALGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+L+ A + +Y P
Sbjct: 229 ILERRLNAWLPSAIKNFFTPLLCLMVIRPVTFLLVGPLSTWISELIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGLVPL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A +++LFG+TEPA+YG+ LP + PF++ CISGAL + + K+
Sbjct: 349 DAQKKVVAGSAALTSLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVY--- 405
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
GL +I +F++ S + + A V V+ G + + F + A +
Sbjct: 406 SFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPAQGAPQE 465
Query: 484 EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIR 543
+ V + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P G I
Sbjct: 466 KTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIA 525
Query: 544 LLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIK 603
LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFDI I+
Sbjct: 526 SLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIR 585
Query: 604 EAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 586 EAGFDLTTPVLISNSDDFTDVLPHGTAQISAGEPLLSI 623
>gi|152971117|ref|YP_001336226.1| putative cellobiose-specific PTS permease [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|150955966|gb|ABR77996.1| putative cellobiose-specific PTS permease [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
Length = 620
Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 270/641 (42%), Positives = 381/641 (59%), Gaps = 27/641 (4%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y LA+DI+ VGGK+NI LVHC TRLRF LKD KAD + L GV+ VV++GGQ+
Sbjct: 2 EYKALAQDILNRVGGKENIVSLVHCATRLRFKLKDNGKADAEGLKANPGVIMVVESGGQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QVVIGNHV DV+ V + AG+S + A++ A +G++ + I ++SG+F P +G ++A
Sbjct: 62 QVVIGNHVHDVWLAVRQEAGLSDDSEPVAEEKAAKGSVLSQLIDIISGIFTPFIGVMAAT 121
Query: 124 GMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
G++KG++A+ G + G Y + AA D LF F PL L TA K+F N F ++ IG
Sbjct: 122 GLLKGLLALAVTCGWLTPEQGTYKIWFAASDALFFFFPLFLGYTAGKKFGGNPFISMVIG 181
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
AL +P + +F A + G +E F G+P+ F +Y S+V+P+I A W
Sbjct: 182 GALTHPLMIQAFEASQA-----PGAAVEH-----FLGIPVTF--INYSSSVIPIILASWV 229
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+E+ ++P +K F P L + VPL FLVIGPV +W S L+ + IY F+P
Sbjct: 230 SCWLERKSNALLPSSMKNFFSPAICLAVVVPLTFLVIGPVATWLSHLLANGYQFIYAFAP 289
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMR 361
L G VLGA WQV V+FGLHWGLVPL I + G +L + AQ GA+L I++
Sbjct: 290 WLAGAVLGAMWQVCVIFGLHWGLVPLMINNMTVLGHDSMLPIILPAVIAQVGAVLGILLA 349
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
T++ + R L+ AF + LFG+TEPAIYG+TLP+R PFI CI+GA+ GA AF +
Sbjct: 350 TRDARQRMLAGSAFSAGLFGITEPAIYGLTLPLRRPFIFGCIAGAIGGAITAFSNSHAYS 409
Query: 422 MGGMGLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
G +F I ++ LI FVL LT +P P A +
Sbjct: 410 FGVPNIFFPAQMIPPGGIDASVWGGLIGTGVAFVLACVLTFFAGLPRASAAPGAVTVAPA 469
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
++ + +P++G V+ALE PD+ FASG +GKGVAI P+VG+V+AP G
Sbjct: 470 SAND------------ILAPMSGSVIALEQVPDSTFASGLLGKGVAIIPAVGQVIAPFPG 517
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
+ LF T HAIGL +D G ELLIHVG+DTV LDG FTAHV +G +V+ G LL+ FD
Sbjct: 518 EVASLFQTKHAIGLQSDSGIELLIHVGIDTVKLDGVPFTAHVKEGDRVQAGDLLIEFDRQ 577
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
I +AGY + TPII++N+ +Y++I+ +A ++ G LL +
Sbjct: 578 AILDAGYDLVTPIIISNSDDYREIDTVASSTVEAGQPLLSV 618
>gi|110349495|gb|ABG73228.1| beta-glucoside transport protein [Klebsiella aerogenes]
Length = 620
Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 270/641 (42%), Positives = 382/641 (59%), Gaps = 27/641 (4%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y LA+DI+ VGGK+NI LVHC TRLRF LKD KAD + L GV+ VV++GGQ+
Sbjct: 2 EYKALAQDILNRVGGKENIVSLVHCATRLRFKLKDNGKADAEGLKANPGVIMVVESGGQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QVVIGNHV DV+ V + AG+S + A++ A +G++ + I ++SG+F P +G ++A
Sbjct: 62 QVVIGNHVHDVWLAVRQEAGLSDDSEPVAEEKAAKGSVLSQLIDIISGIFTPFIGVMAAT 121
Query: 124 GMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
G++KG++A+ G + G Y + AA D LF F PL L TA K+F N F ++ IG
Sbjct: 122 GLLKGLLALAVTCGWLTPEQGTYKIWFAASDALFLFFPLFLGYTAGKKFGGNPFISMVIG 181
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
AL +P + +F A + G +E F G+P+ F +Y S+V+P+I A W
Sbjct: 182 GALTHPLMIQAFEASQA-----PGAAVEH-----FLGIPVTF--INYSSSVIPIILASWV 229
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+E+ ++P +K F P L + VPL FLVIGPV +W S L+ + IY F+P
Sbjct: 230 SCWLERKSNALLPSSMKNFFSPAICLAVVVPLTFLVIGPVATWLSHLLANGYQFIYAFAP 289
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMR 361
+L G VLGA WQV V+FGLHWGLVPL I + G +L + AQ GA+L I++
Sbjct: 290 LLAGAVLGAMWQVCVIFGLHWGLVPLMINNMTVLGHDSMLPIILPAVIAQVGAVLGILLA 349
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
T++ + R L+ AF + LFG+TEPAIYG+TLP+R PFI CI+GA+ GA AF +
Sbjct: 350 TRDARQRMLAGSAFSAGLFGITEPAIYGLTLPLRRPFIFGCIAGAIGGAITAFSNSHAYS 409
Query: 422 MGGMGLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
G +F I ++ LI FVL LT +P P A +
Sbjct: 410 FGVPNIFFPAQMIPPGGIDASVWGGLIGTGVAFVLACVLTFFAGLPRASAAPGAVTVAPA 469
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
++ + +P++G V+ALE PD+ FASG +GKGVAI P+VG+V+AP G
Sbjct: 470 SAND------------ILAPMSGSVIALEQVPDSTFASGLLGKGVAIIPAVGQVIAPFPG 517
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
+ LF T HAIGL +D G ELLIHVG+DTV LDG FTAHV +G +V+ G LL+ FD
Sbjct: 518 EVASLFQTKHAIGLQSDSGIELLIHVGIDTVKLDGVPFTAHVKEGDRVQGGDLLIEFDRQ 577
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
I +AGY + TPII++N+ +Y++I+ +A ++ G LL +
Sbjct: 578 AILDAGYDLATPIIISNSDDYREIDTVASSAVEAGQPLLSV 618
>gi|75258261|ref|ZP_00729709.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Escherichia coli E22]
Length = 625
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 251/638 (39%), Positives = 374/638 (58%), Gaps = 18/638 (2%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L K G++ VV++GGQ+QV
Sbjct: 2 TELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ E + A ++ +GNL +RF+ ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGLD-EKAQQAPENDDKGNLLNRFVYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + L F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFENGQKADELGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+++ A + +Y P
Sbjct: 229 ILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISEMIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGLVPL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + + K+
Sbjct: 349 DAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVY--- 405
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
GL +I +F++ S + + A V V+ G + + F + A +
Sbjct: 406 SFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPAQGAPQE 465
Query: 484 EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIR 543
+ V + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P G I
Sbjct: 466 KTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIA 525
Query: 544 LLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIK 603
LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFDI I+
Sbjct: 526 SLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIR 585
Query: 604 EAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 586 EAGFDLTTPVLISNSDDFTDVLPHGTAQISAGEPLLSI 623
>gi|42519186|ref|NP_965116.1| phosphoenolpyruvate-dependent sugar phosphotransferase system
EIIABC, probable beta-glucoside-specific [Lactobacillus
johnsonii NCC 533]
gi|41583473|gb|AAS09082.1| phosphoenolpyruvate-dependent sugar phosphotransferase system
EIIABC, probable beta-glucoside-specific [Lactobacillus
johnsonii NCC 533]
Length = 730
Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats.
Identities = 251/642 (39%), Positives = 374/642 (58%), Gaps = 40/642 (6%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVV 66
+LA++IV VGGKDN+ LVHC TRLRF LKDESKAD + + + GV+ V AGGQYQV+
Sbjct: 103 KLAEEIVKLVGGKDNVISLVHCATRLRFKLKDESKADDNAIKQLKGVMGVAHAGGQYQVI 162
Query: 67 IGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMI 126
IGN+V DVY+ V+ + G+S + + + D N+ +RFI L++ +F P LG L+AAG++
Sbjct: 163 IGNNVADVYDQVIPLLGLSQDHKENTNKDK---NIVNRFIKLLTTIFTPFLGVLAAAGVL 219
Query: 127 KGVVAIMAALGVAKT-DGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFAL 185
KG + ++ L V T G Y++L AAGD LF FLP+++ + A+ FK+N++ IG AL
Sbjct: 220 KGFLTLLVVLHVLNTKSGTYLILYAAGDALFYFLPVMIGFSTARTFKINEYVGAIIGAAL 279
Query: 186 VYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGAK 245
YP++ ++ ++ + FF +P+I +Y T++P I AVW +
Sbjct: 280 CYPSLVQAYQMKQSI---------------QFFNIPVIL--MNYTQTLIPAIIAVWLASI 322
Query: 246 IEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVLY 305
+ K +P +K+ P TL+I VPL FLV+GP SWAS+ + IY + V+
Sbjct: 323 LYKFLNNYLPSSLKLIFTPLITLMIAVPLTFLVVGPATSWASEELTYSILWIYAHARVVA 382
Query: 306 GIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMMRTKE 364
G +L WQ +V+ GLHW +P+ + + +G I F Q GA L ++++ K+
Sbjct: 383 GFILAGIWQAVVLLGLHWAFIPIFLNNIATRGFDPIDAMLYCTVFGQTGAALALVLKAKD 442
Query: 365 EKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGG 424
K +++ PA IS GVTEP IYG+TLP + FI+ I A GA AF + KM GG
Sbjct: 443 SKFKEIGWPAVISGFLGVTEPIIYGVTLPHKKSFILGSIGSAFGGAIAAFSNAKM--FGG 500
Query: 425 M---GLFAIPSFIE--ASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
G+F IP FI+ A + + + F ++++ F + F I L G
Sbjct: 501 FASGGIFGIPMFIDQKAGINGSFMGFCLSLLVAFGIAF-------ISTLIWGDKIVSTTS 553
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
D + +RV +Q + SP+ G + L++ D VF++G +GKG+A++P+ E+ AP D
Sbjct: 554 KKDFKVKRVE--FKDQGIASPVQGTALELKNVDDPVFSAGTIGKGIAVQPNNDEIHAPFD 611
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + +FPT HAIGL +D+G ELLIH+G++TV L GK F V G KVK+G LL +FD+
Sbjct: 612 GEVVSVFPTKHAIGLKSDNGVELLIHLGINTVNLKGKYFEVKVEVGQKVKQGDLLETFDV 671
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKG--EIQLGNQLL 639
D IK AGY PIIVTN N+ I + K ++ +Q+L
Sbjct: 672 DKIKAAGYDTVVPIIVTNANNFDDIIIEKKNGDSVRFEDQIL 713
>gi|290570|gb|AAA62073.1| transport protein
Length = 625
Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 251/638 (39%), Positives = 374/638 (58%), Gaps = 18/638 (2%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L K G++ VV++GGQ+QV
Sbjct: 2 TELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ E + A ++ +GNL +RF+ ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGLD-EKAQQAPENDDKGNLLNRFVYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWTTEQSGTYLILFSASDALFXFFPIILGYTAGKRFGGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + L F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFENGQKADALGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+L+ A + +Y P
Sbjct: 229 ILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISELIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGLVPL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A +++LFG+TEPA+YG+ LP + PF++ CISGAL + + K+
Sbjct: 349 DAQKKVVAGSAALTSLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVY--- 405
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
GL +I +F++ S + + A V V+ G + + F + +
Sbjct: 406 SFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPXQGAPQE 465
Query: 484 EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIR 543
+ V + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P G I
Sbjct: 466 KTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIA 525
Query: 544 LLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIK 603
LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFDI I+
Sbjct: 526 SLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIR 585
Query: 604 EAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 586 EAGFDLTTPVLISNSDDFTXVLPHGTAQISAGEPLLSI 623
>gi|47096121|ref|ZP_00233721.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 1/2a F6854]
gi|153179156|ref|ZP_01932375.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes F6900]
gi|153184782|ref|ZP_01935509.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes J0161]
gi|47015470|gb|EAL06403.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 1/2a F6854]
gi|126942753|gb|EBA20490.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes J0161]
gi|133732641|gb|EBA34339.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes F6900]
Length = 618
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 268/644 (41%), Positives = 387/644 (60%), Gaps = 37/644 (5%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
++LAK++V VGGK+NI ++HCVTRLRF L+DE+ A+T+ + GV+TVVK+GGQYQV
Sbjct: 4 SDLAKEVVKLVGGKENILSVIHCVTRLRFKLRDENLAETEKIKALKGVMTVVKSGGQYQV 63
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIG+HV VY+ V++V GI + + + + ++F++F+ L+SG+F P+LG L+A+G+
Sbjct: 64 VIGDHVSYVYDEVIRVLGIKPDDAPQDNPEQEHKSIFNKFVELISGIFMPVLGLLAASGI 123
Query: 126 IKGVVAIMAALGVAKTD-GAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG + +G+ T G Y VL AA D LF F+P+IL +A K FK NQ+ + A+G A
Sbjct: 124 LKGFLTAAVTMGLINTSAGVYEVLYAASDALFYFMPIILGFSAGKVFKTNQYLSAAVGAA 183
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LVYP + +++ L TF +P+I +Y +V+PVI A++ +
Sbjct: 184 LVYPTLVDMYSSGAHL---------------TFLHIPVIL--MNYTMSVIPVILAIYFMS 226
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
K+EK K IP +++ VP LLI VP++ ++IGPV ++AS L+ G+Y SP++
Sbjct: 227 KLEKVLVKFIPKSLQLIFVPLLLLLIVVPVSLIIIGPVSTYASQLLAKGALGLYSLSPMI 286
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G L WQV VMFGLHW +P+ I + G I FAQ GA++ +M++T+
Sbjct: 287 AGFFLAGVWQVAVMFGLHWAFIPIFINNISVLGYDPINAMLYCTVFAQTGAVMAVMLKTR 346
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+++R LSI A IS G+TEPAIYG+ LP + PFIM C+ A GA KM G
Sbjct: 347 NQELRSLSITATISGFLGITEPAIYGVNLPYKKPFIMACVGSAFGGAIAGMSAAKM--FG 404
Query: 424 GM---GLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
G G+F IP FI FLI++V F L LT FG + +
Sbjct: 405 GFASGGIFGIPMFINPDGIGWDFWGFLISLVVAFSLALILTYF------FGFKDKVEEVV 458
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
EK + ++ + SPL GE++AL D D VF++G MG GVAI P+ GE+ AP D
Sbjct: 459 IQTGEKATL-----DETIYSPLQGELIALNDVKDEVFSAGIMGAGVAILPASGEIRAPFD 513
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + +F T HAIGL + G ELLIHVG+DTV L+G+ F V + ++KKG LL +F++
Sbjct: 514 GTVLSVFQTKHAIGLISKQGVELLIHVGLDTVNLNGQFFDIEVSESEEIKKGDLLGTFEL 573
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQ-LLELK 642
DTIK+AGY +TTPIIVTN+A + + G+ NQ +LE K
Sbjct: 574 DTIKKAGYDITTPIIVTNSATLADVITVNLGKHVDNNQKILEAK 617
>gi|16803075|ref|NP_464560.1| hypothetical protein lmo1035 [Listeria monocytogenes EGD-e]
gi|153195831|ref|ZP_01940239.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes 10403S]
gi|16410437|emb|CAC99113.1| lmo1035 [Listeria monocytogenes]
gi|127634113|gb|EBA23499.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes 10403S]
Length = 618
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 267/644 (41%), Positives = 388/644 (60%), Gaps = 37/644 (5%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
++LAK++V VGGK+NI ++HCVTRLRF L+DE+ A+T+ + GV+TVVK+GGQYQV
Sbjct: 4 SDLAKEVVKLVGGKENILSVIHCVTRLRFKLRDENLAETEKIKALKGVMTVVKSGGQYQV 63
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIG+HV VY+ V++V GI + ++ + + ++F++F+ L+SG+F P+LG L+A+G+
Sbjct: 64 VIGDHVSYVYDEVIRVLGIKPDDALQDNPEQEHKSIFNKFVELISGIFMPVLGLLAASGI 123
Query: 126 IKGVVAIMAALGVAKTD-GAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG + +G+ T G Y VL AA D LF F+P+IL +A K FK NQ+ + A+G A
Sbjct: 124 LKGFLTAAVTMGLINTSAGVYEVLYAASDALFYFMPIILGFSAGKVFKTNQYLSAAVGAA 183
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LVYP + +++ L TF +P+I +Y +V+PVI A++ +
Sbjct: 184 LVYPTLVDMYSSGAHL---------------TFLHIPVIL--MNYTMSVIPVILAIYFMS 226
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
K+EK K IP +++ VP LLI VP++ ++IGPV ++AS L+ G+Y SP++
Sbjct: 227 KLEKVLVKFIPKSLQLIFVPLLLLLIVVPVSLIIIGPVSTYASQLLAKGALGLYSLSPMI 286
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G L WQV VMFGLHW +P+ I + G I FAQ GA++ +M++T+
Sbjct: 287 AGFFLAGVWQVAVMFGLHWAFIPIFINNISVLGYDPINAMLYCTVFAQTGAVMAVMLKTR 346
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+++R LSI A IS G+TEPAIYG+ LP + PFIM C+ A GA KM G
Sbjct: 347 NQELRSLSITATISGFLGITEPAIYGVNLPYKKPFIMACVGSAFGGAIAGMSAAKM--FG 404
Query: 424 GM---GLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
G G+F IP FI FLI++V F + LT FG + +
Sbjct: 405 GFASGGIFGIPMFINPDGIGWDFWGFLISLVVAFSVALILTYF------FGFKDKVEEVV 458
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
EK + ++ + SPL GE++AL D D VF++G MG GVAI P+ GE+ AP D
Sbjct: 459 IQTGEKATL-----DETIYSPLQGELIALNDVKDEVFSAGIMGAGVAILPASGEIRAPFD 513
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + +F T HAIGL + G ELLIHVG+DTV L+G+ F V + ++KKG LL +F++
Sbjct: 514 GTVLSVFQTKHAIGLISKQGVELLIHVGLDTVNLNGQFFDIEVSESEEIKKGDLLGTFEL 573
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQ-LLELK 642
DTIK+AGY +TTPIIVTN+A + + G+ NQ +LE K
Sbjct: 574 DTIKKAGYDITTPIIVTNSATLADVITVNLGKHVDNNQKILEAK 617
>gi|75210668|ref|ZP_00710809.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Escherichia coli B171]
Length = 625
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 250/638 (39%), Positives = 373/638 (58%), Gaps = 18/638 (2%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L K G++ VV++GGQ+QV
Sbjct: 2 TELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ E + A ++ + NL +RF+ ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGLD-EKAQQAPENDDKSNLLNRFVYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F + L F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFENGQKADELGL----------DFLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++GP+ +W S+++ A + +Y P
Sbjct: 229 ILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISEMIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLHWGLVPL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + + K+
Sbjct: 349 DAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVY--- 405
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
GL +I +F++ S + + A V V+ G + + F + A +
Sbjct: 406 SFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPAQGAPQE 465
Query: 484 EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIR 543
+ V + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P G I
Sbjct: 466 KTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIA 525
Query: 544 LLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIK 603
LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFDI I+
Sbjct: 526 SLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIR 585
Query: 604 EAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 586 EAGFDLTTPVLISNSDDFTDVLPHGTAQISAGEPLLSI 623
>gi|153174100|ref|ZP_01929662.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes FSL N3-165]
gi|133730469|gb|EBA32167.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes FSL N3-165]
Length = 618
Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 267/644 (41%), Positives = 387/644 (60%), Gaps = 37/644 (5%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
++LAK++V VGGK+NI ++HCVTRLRF L+DE+ A+T+ + GV+TVVK+GGQYQV
Sbjct: 4 SDLAKEVVKLVGGKENILSVIHCVTRLRFKLRDENLAETEKIKALKGVMTVVKSGGQYQV 63
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIG+HV VY+ V++V GI + + + + ++F++F+ L+SG+F P+LG L+A+G+
Sbjct: 64 VIGDHVSYVYDEVIRVLGIKPDDAPQDNPEQEHKSIFNKFVELISGIFMPVLGLLAASGI 123
Query: 126 IKGVVAIMAALGVAKTD-GAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG + +G+ T G Y VL AA D LF F+P+IL +A K FK NQ+ + A+G A
Sbjct: 124 LKGFLTAAVTMGLINTSAGVYEVLYAASDALFYFMPIILGFSAGKVFKTNQYLSAAVGAA 183
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LVYP + +++ L TF +P+I +Y +V+PVI A++ +
Sbjct: 184 LVYPTLVDMYSSGAHL---------------TFLHIPVIL--MNYTMSVIPVILAIYFMS 226
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
K+EK K IP +++ VP LLI VP++ ++IGPV ++AS L+ G+Y SP++
Sbjct: 227 KLEKVLVKFIPKSLQLIFVPLLLLLIVVPVSLIIIGPVSTYASQLLAKGALGLYSLSPMI 286
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G L WQV VMFGLHW +P+ I + G I FAQ GA++ +M++T+
Sbjct: 287 AGFFLAGVWQVAVMFGLHWAFIPIFINNISVLGYDPINAMLYCTVFAQTGAVMAVMLKTR 346
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+++R LSI A IS G+TEPAIYG+ LP + PFIM C+ A GA KM G
Sbjct: 347 NQELRSLSITATISGFLGITEPAIYGVNLPYKKPFIMACVGSAFGGAIAGMSAAKM--FG 404
Query: 424 GM---GLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
G G+F IP FI FLI++V F + LT FG + +
Sbjct: 405 GFASGGIFGIPMFINPDGIGWDFWGFLISLVVAFSVALILTYF------FGFKDKVEEVV 458
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
EK + ++ + SPL GE++AL D D VF++G MG GVAI P+ GE+ AP D
Sbjct: 459 IQTGEKATL-----DETIYSPLQGEIIALNDVKDEVFSAGIMGAGVAILPASGEIRAPFD 513
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + +F T HAIGL + G ELLIHVG+DTV L+G+ F V + ++KKG LL +F++
Sbjct: 514 GTVLSVFQTKHAIGLISKQGVELLIHVGLDTVNLNGQFFDIEVSESEEIKKGDLLGTFEL 573
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQ-LLELK 642
DTIK+AGY +TTPIIVTN+A + + G+ NQ +LE K
Sbjct: 574 DTIKKAGYDITTPIIVTNSATLADVITVNLGKHVDNNQKILEAK 617
>gi|153176093|ref|ZP_01931352.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes FSL N3-165]
gi|133728806|gb|EBA30504.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes FSL N3-165]
Length = 640
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 250/642 (38%), Positives = 381/642 (59%), Gaps = 25/642 (3%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y L+K I+ +VGGK+N+ + HC+TRLRF+LKD+SK + D L K ++T AGG++Q
Sbjct: 4 YQALSKFILENVGGKENVLSMTHCMTRLRFTLKDDSKVNEDILKKSSEIMTAQFAGGRFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIG HV DVY + V G ++ V+ +R I +++ + P+LG L+A+G
Sbjct: 64 VVIGTHVSDVYNEIQGVTGAD-----KTEEAEVKKTGLNRLIEIITKVITPVLGILTASG 118
Query: 125 MIKGVVAIMAALGVAK-TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
+++G++A++ V DG Y+VL+A G +F FLP++L T+AK F +N + + +G
Sbjct: 119 LLQGILALLTITNVIDVNDGGYIVLHAMGQAVFYFLPVVLGYTSAKAFNLNPYVGMMLGA 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
LV P + + +K LYTLF GT +P+++TFFG+PI+FP + Y TV+PVI + G
Sbjct: 179 TLVIPELMTNLVTDKALYTLFDGTMFSTPVYNTFFGIPILFPPNGYQYTVIPVIFITFLG 238
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
AK+EK KKI+P ++ + F T+LIT PLA L+IGPV + S L+ A +G+Y+ SPV
Sbjct: 239 AKVEKILKKIVPPLLAHNLNSFLTILITFPLAILIIGPVTNVLSSLISAGVSGLYEVSPV 298
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMMRT 362
+ +V+G +Q LV+FGLHW + + I L Q G I S FAQ +L + ++T
Sbjct: 299 ITSVVVGLLYQPLVIFGLHWPMSAIGINNLAQYGVDYIFPMSFTASFAQTAVVLAVYLKT 358
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
+ + L+IPA IS +F + EPAIYG +LP++ F + I GA+ ++ F VKM
Sbjct: 359 RSRNQKALAIPAMISGMFCIIEPAIYGFSLPVKKRFAFSMIGGAVGSLIISIFSVKMYAF 418
Query: 423 GGMGLFAIPSFIEASNSMTLIHFLIAIVANFV---LGFGLTQLIKIPNLFGGPSEKDAAE 479
G+ SFI +NS +L +AI A V + F LT F S +D +
Sbjct: 419 -AFGVLGFVSFINPANS-SLGGLYVAIFATIVTMAVSFSLT-------FFTFKSSEDVVD 469
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
E I +Q V +P+AG + + + D FAS MG+GV I P+ +VVAPA
Sbjct: 470 ------EETKPLIKQQEVLAPIAGTMQPISSSADETFASKTMGEGVVIFPTGSKVVAPAA 523
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
GV+ +FP HA+G+ T++G E+LIH+G+DTV L+G+GF V GSKVK+GQ L++ D
Sbjct: 524 GVVTTVFPGGHALGITTENGTEILIHIGIDTVELNGEGFDVQVEVGSKVKQGQTLVNVDF 583
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
+ I+ GY +++ NT ++ I K ++ G ++L L
Sbjct: 584 EAIENKGYKSEVLVVILNTDDFLDIISEEKTTVKQGGKMLTL 625
>gi|61970257|gb|AAX57579.1| CasF [Pectobacterium carotovorum subsp. carotovorum]
Length = 658
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 262/653 (40%), Positives = 391/653 (59%), Gaps = 36/653 (5%)
Query: 8 LAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVI 67
LA++I+ VGG N++ LVHC TRLRF + D K D L +GV+TV+ A GQ QVVI
Sbjct: 22 LAENILRLVGGXTNVSTLVHCATRLRFKIVDHGKVDVAALEALEGVITVINASGQLQVVI 81
Query: 68 GNHVPDVYETVLKVAGI--SGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
GN VP+VY ++ + G+G + + R I LV+G+F P+LG ++AAG+
Sbjct: 82 GNRVPEVYRAFGSISKLLEDGDGKRQTAESEQSTSAMGRLIDLVAGIFTPLLGAMAAAGV 141
Query: 126 IKGVVAIMAALGVAKT-DGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG +AI+ ALG T + YV+L+AA D LF FLP++LAITAA++F+ N F A++I A
Sbjct: 142 LKGALAIVLALGWLNTKESTYVILHAASDSLFYFLPMLLAITAARKFETNIFVAVSIAGA 201
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LVYP I F A +P+ TFFGLP++ Y ++V+P+I +VW +
Sbjct: 202 LVYPTIQGLFDAGQPV---------------TFFGLPVVM--MKYTASVIPIIFSVWLMS 244
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
IE+ + I + V+ + PFF LL+ VPL + IGP+ AS L+ ++F IY+F+P++
Sbjct: 245 YIERFLNRHIHESVRNILTPFFLLLLMVPLTLMTIGPIGISASKLIASVFVSIYEFNPII 304
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALLNIMMRTK 363
G ++ A+WQVLV+FG+HWG V + I +L G + AS FAQ+GALL +M+RTK
Sbjct: 305 AGALMAASWQVLVIFGVHWGFVTVFINDLSVMGHSYLKAASSPSVFAQSGALLGVMVRTK 364
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+K++ L+ FI++LFG+TEP +YG+TL ++ PFI I+ A+ GA + + MG
Sbjct: 365 NKKLKALAGSTFIASLFGITEPGVYGVTLKLKKPFICAVIAAAIGGAIVGYAKSSAVSMG 424
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVL----GF-----------GLTQLIKIPNL 468
GL +P F LI IA A+FVL GF T+
Sbjct: 425 MPGLLTLPIFYGEGFVGFLIGCAIAFAASFVLTVIVGFDDPTPPVENTSAPTRSSSTSAT 484
Query: 469 FGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIE 528
P + A ++ + A T + + SP+ GE++ LED D VF+SG +G+GVAI
Sbjct: 485 PAAPVSRQPANAVPPAQPLKDAPATAEQLGSPVKGELILLEDVDDKVFSSGVVGQGVAIL 544
Query: 529 PSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKV 588
P G + +P DGVI F + HA+G+ + +GAE+LIHVG++TV L+G+ + HV +G KV
Sbjct: 545 PKEGRIYSPVDGVIASTFSSGHAVGILSQNGAEILIHVGINTVQLEGQHYQMHVAEGDKV 604
Query: 589 KKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
+KGQLLL FD++ IK+AGY TP++VTN Y + ++++G+ ++ L
Sbjct: 605 QKGQLLLEFDLEAIKQAGYDTVTPMVVTNADEYHLFSPGSARQLRVGDTIIAL 657
>gi|153197376|ref|ZP_01941626.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes 10403S]
gi|127633095|gb|EBA22513.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes 10403S]
Length = 640
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 250/642 (38%), Positives = 381/642 (59%), Gaps = 25/642 (3%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y L+K I+ +VGGK+N+ + HC+TRLRF+LKD+SK + D L K ++T AGG++Q
Sbjct: 4 YQALSKFILENVGGKENVLSVTHCMTRLRFTLKDDSKVNEDILKKSSEIMTAQFAGGRFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIG HV DVY + V G ++ V+ +R I +++ + P+LG L+A+G
Sbjct: 64 VVIGTHVSDVYNEIQGVTGAD-----KTEEAEVKKTGLNRLIEIITKVITPVLGILTASG 118
Query: 125 MIKGVVAIMAALGVAK-TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
+++G++A++ V DG Y+VL+A G +F FLP++L T+AK F +N + + +G
Sbjct: 119 LLQGILALLTITKVIDVNDGGYIVLHAMGQAVFYFLPVVLGYTSAKAFNLNPYVGMMLGA 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
LV P + + +K LYTLF GT +P+++TFFG+PI+FP + Y TV+PVI + G
Sbjct: 179 TLVIPELMTNLVTDKALYTLFDGTMFSTPVYNTFFGIPILFPPNGYQYTVIPVIFITFLG 238
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
AK+EK KKI+P ++ + F T+LIT PLA L+IGPV + S L+ A +G+Y+ SPV
Sbjct: 239 AKVEKILKKIVPPLLAHNLNSFLTILITFPLAILIIGPVTNVLSSLISAGVSGLYEVSPV 298
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMMRT 362
+ +V+G +Q LV+FGLHW + + I L Q G I S FAQ +L + ++T
Sbjct: 299 ITSVVVGLLYQPLVIFGLHWPMSAIGINNLAQYGVDYIFPMSFTASFAQTAVVLAVYLKT 358
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
+ + L+IPA IS +F + EPAIYG +LP++ F + I GA+ ++ F VKM
Sbjct: 359 RSRNQKALAIPAMISGMFCIIEPAIYGFSLPVKKRFAFSMIGGAVGSLIISIFSVKMYAF 418
Query: 423 GGMGLFAIPSFIEASNSMTLIHFLIAIVANFV---LGFGLTQLIKIPNLFGGPSEKDAAE 479
G+ SFI +NS +L +AI A V + F LT F S +D +
Sbjct: 419 -AFGVLGFVSFINPANS-SLGGLYVAIFATIVTMAVSFSLT-------FFTFKSSEDVVD 469
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
E I +Q V +P+AG + + + D FAS MG+GV I P+ +VVAPA
Sbjct: 470 ------EETKPLIKQQEVLAPIAGTMQPISSSADETFASKTMGEGVVIFPTGSKVVAPAA 523
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
GV+ +FP HA+G+ T++G E+LIH+G+DTV L+G+GF V GSKVK+GQ L++ D
Sbjct: 524 GVVTTVFPGGHALGITTENGTEILIHIGIDTVELNGEGFDVQVEVGSKVKQGQTLVNVDF 583
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
+ I+ GY +++ NT ++ I K ++ G ++L L
Sbjct: 584 EAIENKGYKSEVLVVILNTDDFLDIISEEKTTVKQGGKMLTL 625
>gi|30065037|ref|NP_839208.1| PTS system beta-glucosides, enzyme II, cryptic [Shigella flexneri
2a str. 2457T]
gi|56480403|ref|NP_709472.2| PTS system beta-glucosides, enzyme II, cryptic [Shigella flexneri
2a str. 301]
gi|30043298|gb|AAP19019.1| PTS system beta-glucosides, enzyme II, cryptic [Shigella flexneri
2a str. 2457T]
gi|56383954|gb|AAN45179.2| PTS system beta-glucosides, enzyme II, cryptic [Shigella flexneri
2a str. 301]
Length = 625
Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 255/639 (39%), Positives = 377/639 (58%), Gaps = 20/639 (3%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TELA+ IVA VGG DNI L+HC TRLRF LKDESKA + L K G++ VV++GGQ+QV
Sbjct: 2 TELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQV 61
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIGNHV DV+ V VAG+ GE + A ++ +GNL +RF+ ++SG+F P++G ++A G+
Sbjct: 62 VIGNHVADVFLAVNSVAGL-GEKAQQAPENDEKGNLLNRFVYVISGIFTPLIGLMAATGI 120
Query: 126 IKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG++A+ + G Y++L +A D LF F P+IL TA KRF N FTA+ IG A
Sbjct: 121 LKGMLALALTFQWTTEQSGTYLILFSASDALFGFFPIILGYTAGKRFGGNPFTAMVIGGA 180
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV+P I +F G ++P F G+P+ +Y S+V+P+I + W +
Sbjct: 181 LVHPLILTAFEN---------GQKADAPGLD-FLGIPVTL--LNYSSSVIPIIFSAWLCS 228
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
+E+ +P +K F P L++ P+ FL++G + +W S+++ A + +Y P
Sbjct: 229 ILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGQLSTWISEMIAAGYLWLYQAVPAF 288
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G V+G WQ+ VMFGLH GLVPL I G ++ + AQ GA L + + +
Sbjct: 289 AGAVMGGFWQIFVMFGLHRGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCER 348
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + + K+
Sbjct: 349 DAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVY--- 405
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
GL +I +F++ S + + A V V+ G + L S++ A+
Sbjct: 406 SFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCA-FVGTLMLHFITSKRQPAQGAPQ 464
Query: 484 EKERVSAGITEQV-VTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVI 542
EK EQ + SP+ GE+V L D FASG +GKG+AI PSVGEV +P G I
Sbjct: 465 EKTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRI 524
Query: 543 RLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTI 602
LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SFDI I
Sbjct: 525 ASLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAI 584
Query: 603 KEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
+EAG+ +TTP++++N+ ++ + +I G LL +
Sbjct: 585 REAGFDLTTPVLISNSDDFTDVLPHGTAQISAGEPLLSI 623
>gi|16804824|ref|NP_466309.1| beta-glucoside-specific phosphotransferase enzyme II ABC component
[Listeria monocytogenes EGD-e]
gi|16412287|emb|CAD01000.1| beta-glucoside-specific phosphotransferase enzyme II ABC component
[Listeria monocytogenes]
Length = 640
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 250/642 (38%), Positives = 384/642 (59%), Gaps = 25/642 (3%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y L+K I+ +VGGK+N+ + HC+TRLRF+LKD+SK + D L K ++T AGG++Q
Sbjct: 4 YQALSKFILENVGGKENVLSVTHCMTRLRFTLKDDSKVNEDILKKSSEIMTAQFAGGRFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIG HV DVY ++ G++G + + V+ +R I +++ + P+LG L+A+G
Sbjct: 64 VVIGTHVSDVYN---EIQGVTGADKIAEAE--VKKTGLNRLIEIITKVITPVLGILTASG 118
Query: 125 MIKGVVAIMAALGVAK-TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
+++G++A++ V DG Y+VL+A G +F FLP++L T+AK F +N + + +G
Sbjct: 119 LLQGILALLTITNVIDVNDGGYIVLHAMGQAVFYFLPVVLGYTSAKAFNLNPYVGMMLGA 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
LV P + + +K LYTLF GT +P+++TFFG+PI+FP + Y TV+PVI + G
Sbjct: 179 TLVIPELMTNLVTDKALYTLFDGTMFSTPVYNTFFGIPILFPPNGYQYTVIPVIFITFLG 238
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
AK+EK KKI+P ++ + F T+LIT PLA L+IGPV + S L+ A +G+Y+ SPV
Sbjct: 239 AKVEKILKKIVPPLLAHNLNSFLTILITFPLAILIIGPVTNVLSSLISAGVSGLYEVSPV 298
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMMRT 362
+ +V+G +Q LV+FGLHW + + I L Q G I S FAQ +L + ++T
Sbjct: 299 ITSVVVGLLYQPLVIFGLHWPMSAIGINNLAQYGVDYIFPMSFTASFAQTAVVLAVYLKT 358
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
+ + L+IPA IS +F + EPAIYG +LP++ F + I GA+ ++ F VKM
Sbjct: 359 RSRNQKALAIPAMISGMFCIIEPAIYGFSLPVKKRFAFSMIGGAVGSLIISIFSVKMYAF 418
Query: 423 GGMGLFAIPSFIEASNSMTLIHFLIAIVANFV---LGFGLTQLIKIPNLFGGPSEKDAAE 479
G+ SFI +NS +L +AI A V + F LT F S +D +
Sbjct: 419 -AFGVLGFVSFINPANS-SLGGLYVAIFATIVTMAVSFSLT-------FFTFKSSEDVVD 469
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
E I +Q V +P+AG + + + D FAS MG+GV I P+ +VVAPA
Sbjct: 470 ------EETKPLIKQQEVLAPIAGTMQPISSSADETFASKTMGEGVVIFPTGSKVVAPAA 523
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
GV+ +FP HA+G+ T++G E+LIH+G+DTV L+G+GF V GSKVK+GQ L++ D
Sbjct: 524 GVVTTVFPGGHALGITTENGTEILIHIGIDTVELNGEGFDVQVEVGSKVKQGQTLVNVDF 583
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
+ I+ GY +++ NT ++ I K ++ G ++L L
Sbjct: 584 EAIENKGYKSEVLVVILNTDDFLDIISEEKTTVKQGGKMLTL 625
>gi|46907267|ref|YP_013656.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 4b F2365]
gi|47092927|ref|ZP_00230708.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 4b H7858]
gi|153201755|ref|ZP_01943534.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes HPB2262]
gi|46880534|gb|AAT03833.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 4b F2365]
gi|47018674|gb|EAL09426.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 4b H7858]
gi|133735746|gb|EBA37444.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes HPB2262]
Length = 618
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 267/644 (41%), Positives = 385/644 (59%), Gaps = 37/644 (5%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
++LAK++V VGGK+NI ++HCVTRLRF L+DE+ A+T+ + GV+TVVK+GGQYQV
Sbjct: 4 SDLAKEVVKLVGGKENILSVIHCVTRLRFKLRDENLAETEKIKALKGVMTVVKSGGQYQV 63
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGM 125
VIG+HV VY+ V++V GI + + + + ++F++F+ L+SG+F P+LG L+A+G+
Sbjct: 64 VIGDHVSYVYDEVIRVLGIKPDDAPQDNPEQEHKSIFNKFVELISGIFMPVLGLLAASGI 123
Query: 126 IKGVVAIMAALGVAKTD-GAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+KG + +G+ T G Y VL AA D LF F+P+IL +A K FK NQ+ + A+G A
Sbjct: 124 LKGFLTAAVTMGLINTSAGVYEVLYAASDALFYFMPIILGFSAGKVFKTNQYLSAAVGAA 183
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LVYP + +++ L TF +P+I +Y +V+PVI A++ +
Sbjct: 184 LVYPTLVDMYSSGAHL---------------TFLHIPVIL--MNYTMSVIPVILAIYFMS 226
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
K+EK K IP +++ VP LLI VP++ ++IGPV ++AS L+ G+Y SP++
Sbjct: 227 KLEKVLVKFIPKSLQLIFVPLLLLLIVVPVSLIIIGPVSTYASQLLAKGALGLYSLSPMI 286
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTK 363
G L WQV VMFGLHW +P+ I + G I FAQ GA+L +M++T+
Sbjct: 287 AGFFLAGIWQVAVMFGLHWAFIPIFINNISVLGYDPINAMLYCTVFAQTGAVLAVMLKTR 346
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+++R LSI A IS G+TEPAIYG+ LP + PFIM C+ A GA KM G
Sbjct: 347 NQELRSLSITATISGFLGITEPAIYGVNLPYKKPFIMACVGSAFGGAIAGMSAAKM--FG 404
Query: 424 GM---GLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
G G+F IP FI FLI++V F + LT FG + +
Sbjct: 405 GFASGGIFGIPMFINPDGIGWDFWGFLISLVVAFSVALILTYF------FGFKDKVEEVV 458
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
EK + ++ + SPL GE++AL D D VF++G MG GVAI P+ GE+ AP D
Sbjct: 459 IQTGEKATL-----DETIYSPLQGEIIALNDVKDEVFSAGIMGAGVAILPASGEIRAPFD 513
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + +F T HAIGL + G ELLIHVG+DTV L+G+ F V + ++KKG LL F++
Sbjct: 514 GTVLSVFQTKHAIGLISKQGVELLIHVGLDTVNLNGQFFDIEVSESEEIKKGDLLGRFEL 573
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQ-LLELK 642
D IK+AGY +TTPIIVTN+A + + G+ NQ +LE K
Sbjct: 574 DAIKKAGYDITTPIIVTNSATLADVITVNLGKSVDNNQKILEAK 617
>gi|47095594|ref|ZP_00233202.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes str. 1/2a F6854]
gi|153180968|ref|ZP_01933935.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes F6900]
gi|153184283|ref|ZP_01935042.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes J0161]
gi|153192574|ref|ZP_01939534.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes J2818]
gi|47016024|gb|EAL06949.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes str. 1/2a F6854]
gi|126942786|gb|EBA20520.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes J0161]
gi|127763611|gb|EBA24445.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes J2818]
gi|133731486|gb|EBA33184.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes F6900]
Length = 640
Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats.
Identities = 249/643 (38%), Positives = 381/643 (59%), Gaps = 25/643 (3%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y L+K I+ +VGGK+N+ + HC+TRLRF+LKD+SK + D L K ++T AGG++
Sbjct: 3 NYQALSKFILENVGGKENVLSVTHCMTRLRFTLKDDSKVNEDILKKSSEIMTAQFAGGRF 62
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QVVIG HV DVY + V G ++ V+ +R I +++ + P+LG L+A+
Sbjct: 63 QVVIGTHVSDVYNEIQGVTGAD-----KTEEAEVKKTGLNRLIEIITKVITPVLGILTAS 117
Query: 124 GMIKGVVAIMAALGVAK-TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
G+++G++A++ V DG Y+VL+A G +F FLP++L T+AK F +N + + +G
Sbjct: 118 GLLQGILALLTITNVIDVNDGGYIVLHAMGQAVFYFLPVVLGYTSAKAFNLNPYVGMMLG 177
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
LV P + + +K LYTLF GT +P+++TFFG+PI+FP + Y TV+PVI +
Sbjct: 178 ATLVIPELMTNLVTDKALYTLFDGTMFSTPVYNTFFGIPILFPPNGYQYTVIPVIFITFL 237
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
GAK+EK KKI+P ++ + F T+LIT PLA L+IGPV + S L+ A +G+Y+ SP
Sbjct: 238 GAKVEKILKKIVPPLLAHNLNSFLTILITFPLAILIIGPVTNVLSSLISAGVSGLYEVSP 297
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMMR 361
V+ +V+G +Q LV+FGLHW + + I L Q G I S FAQ +L + ++
Sbjct: 298 VITSVVVGLLYQPLVIFGLHWPMSAIGINNLAQYGVDYIFPMSFTASFAQTAVVLAVYLK 357
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
T+ + L+IPA IS +F + EPAIYG +LP++ F + I GA+ ++ F VKM
Sbjct: 358 TRSRNQKALAIPAMISGMFCIIEPAIYGFSLPVKKRFAFSMIGGAVGSLIISIFSVKMYA 417
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFV---LGFGLTQLIKIPNLFGGPSEKDAA 478
G+ SFI +NS +L +AI A V + F LT F S +D
Sbjct: 418 F-AFGVLGFVSFINPANS-SLGGLYVAIFATIVTMAVSFSLT-------FFTFKSSEDVV 468
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
+ E I +Q V +P+AG + + + D FAS MG+GV I P+ +VVAPA
Sbjct: 469 D------EETKPLIKQQEVLAPIAGTMQPISSSADETFASKTMGEGVVIFPTGSKVVAPA 522
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
GV+ +FP HA+G+ T++G E+LIH+G+DTV L+G+GF V GSKVK+GQ L++ D
Sbjct: 523 AGVVTTVFPGGHALGITTENGTEILIHIGIDTVELNGEGFDVQVEVGSKVKQGQTLVNVD 582
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
+ I+ GY +++ NT ++ I K ++ ++L L
Sbjct: 583 FEAIENKGYKSEVLVVILNTDDFLDIISEEKTTVKQAGKMLTL 625
>gi|4138149|emb|CAA07717.1| PTS enzyme II [Listeria monocytogenes]
Length = 640
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 249/642 (38%), Positives = 383/642 (59%), Gaps = 25/642 (3%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y L+K I+ +VGGK+N+ + HC+TRLRF+LKD+SK + D L K ++T GG++Q
Sbjct: 4 YQALSKFILENVGGKENVLSVTHCMTRLRFTLKDDSKVNEDILKKSSEIMTAQFRGGRFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
VVIG HV DVY ++ G++G + + V+ +R I +++ + P+LG L+A+G
Sbjct: 64 VVIGTHVSDVYN---EIQGVTGADKIAEAE--VKKTGLNRLIEIITKVITPVLGILTASG 118
Query: 125 MIKGVVAIMAALGVAK-TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
+++G++A++ V DG Y+VL+A G +F FLP++L T+AK F +N + + +G
Sbjct: 119 LLQGILALLTITNVIDVNDGGYIVLHAMGQAVFYFLPVVLGYTSAKAFNLNPYVGMMLGA 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
LV P + + +K LYTLF GT +P+++TFFG+PI+FP + Y TV+PVI + G
Sbjct: 179 TLVIPELMTNLVTDKALYTLFDGTMFSTPVYNTFFGIPILFPPNGYQYTVIPVIFITFLG 238
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
AK+EK KKI+P ++ + F T+LIT PLA L+IGPV + S L+ A +G+Y+ SPV
Sbjct: 239 AKVEKILKKIVPPLLAHNLNSFLTILITFPLAILIIGPVTNVLSSLISAGVSGLYEVSPV 298
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMMRT 362
+ +V+G +Q LV+FGLHW + + I L Q G I S FAQ +L + ++T
Sbjct: 299 ITSVVVGLLYQPLVIFGLHWPMSAIGINNLAQYGVDYIFPMSFTASFAQTAVVLAVYLKT 358
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
+ + L+IPA IS +F + EPAIYG +LP++ F + I GA+ ++ F VKM
Sbjct: 359 RSRNQKALAIPAMISGMFCIIEPAIYGFSLPVKKRFAFSMIGGAVGSLIISIFSVKMYAF 418
Query: 423 GGMGLFAIPSFIEASNSMTLIHFLIAIVANFV---LGFGLTQLIKIPNLFGGPSEKDAAE 479
G+ SFI +NS +L +AI A V + F LT F S +D +
Sbjct: 419 -AFGVLGFVSFINPANS-SLGGLYVAIFATIVTMAVSFSLT-------FFTFKSSEDVVD 469
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
E I +Q V +P+AG + + + D FAS MG+GV I P+ +VVAPA
Sbjct: 470 ------EETKPLIKQQEVLAPIAGTMQPISSSADETFASKTMGEGVVIFPTGSKVVAPAA 523
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
GV+ +FP HA+G+ T++G E+LIH+G+DTV L+G+GF V GSKVK+GQ L++ D
Sbjct: 524 GVVTTVFPGGHALGITTENGTEILIHIGIDTVELNGEGFDVQVEVGSKVKQGQTLVNVDF 583
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
+ I+ GY +++ NT ++ I K ++ G ++L L
Sbjct: 584 EAIENKGYKSEVLVVILNTDDFLDIISEEKTTVKQGGKMLTL 625
>gi|28379828|ref|NP_786720.1| beta-glucosides PTS, EIIBCA [Lactobacillus plantarum WCFS1]
gi|28272669|emb|CAD65598.1| beta-glucosides PTS, EIIBCA [Lactobacillus plantarum WCFS1]
Length = 624
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 247/646 (38%), Positives = 383/646 (59%), Gaps = 42/646 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY+ELA+ I+ ++GGKDNI+K HC TRLRF+LK KA+T+ + DGV+TVV++ GQY
Sbjct: 2 DYSELAQSILTNIGGKDNISKAWHCATRLRFNLKSTDKANTEAIENLDGVITVVQSAGQY 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAV-----EGNLFDRFIALVSGLFQPMLG 118
QVVIGN V V+ + +AG++ + + N+ +RFIA +SG+F P LG
Sbjct: 62 QVVIGNAVAQVFAVLADLAGLANPDTAADAATTTEDTGEKQNIINRFIAFISGIFTPFLG 121
Query: 119 TLSAAGMIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFT 177
L+ AG++KG++A+ A + + T GAY + +AGD +F FLP+ LA TAAK+ K+NQF
Sbjct: 122 ALAGAGILKGLLALAVAFNLMSTTSGAYKIWYSAGDAIFYFLPVFLAFTAAKQLKVNQFV 181
Query: 178 ALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVI 237
A+++G AL+YP + T L+ FFG+P++ ++Y STV+P++
Sbjct: 182 AVSLGAALLYPTLVTVMTNSTTLH---------------FFGIPVV--PTTYTSTVIPIL 224
Query: 238 AAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGI 297
AVW + +E K+ P ++ P F+L+I VPL LV+GP+ + + + I
Sbjct: 225 LAVWVLSYLEPVLDKLFPAAIRNIFTPLFSLIIMVPLTLLVVGPIGGLIGNGLASGVMAI 284
Query: 298 YDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALL 356
Y+F P+ G+++GA WQV V+FG+HW VPL + + K G +L A +QAGA L
Sbjct: 285 YNFMPIGAGVIMGAFWQVFVIFGVHWTFVPLMMNNIAKMGYDPLLPILSAAVLSQAGAAL 344
Query: 357 NIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFD 416
+ ++++++K++ L+ +F++ALFG+TEP IYG+TL ++ PF + GAL GA +
Sbjct: 345 AVFLKSRDQKMKALAGSSFVTALFGITEPTIYGVTLKLKRPFYCAVVGGALGGAIIGAAG 404
Query: 417 VKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKD 476
L A+P+F+ +I ++A + +L + FG ++
Sbjct: 405 THASSFTLPSLLAVPTFLGHGFMGEVIGLIVAFLGGAILTY----------FFGFARQQQ 454
Query: 477 AAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVA 536
A S+ S++ ++ V +P+ G ++ L D VFAS AMGKG+AI P+ G V A
Sbjct: 455 ADYSVVSDQ-------SDNTVMAPVEGTIIPLTSVHDEVFASEAMGKGLAIVPNKGTVTA 507
Query: 537 PADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLS 596
P DG I ++PT HAIG+ + GAE+LIH+G++TV L+G+ F V Q VK+G LL
Sbjct: 508 PVDGTITAVYPTGHAIGITANSGAEILIHIGINTVQLNGQYFETMVKQNQVVKRGDLLTK 567
Query: 597 FDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
FD+D IK AGY T +I+TNTA+Y+ ++ E N +LEL+
Sbjct: 568 FDVDKIKTAGYDTTVMVIITNTADYQMVKPTDATETS-DNWILELQ 612
>gi|154503022|ref|ZP_02040082.1| hypothetical protein RUMGNA_00844 [Ruminococcus gnavus ATCC 29149]
gi|153796376|gb|EDN78796.1| hypothetical protein RUMGNA_00844 [Ruminococcus gnavus ATCC 29149]
Length = 638
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 242/639 (37%), Positives = 363/639 (56%), Gaps = 51/639 (7%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y+ LA DI+ +VGGK+N+ L HCVTRLRF L DES A+ + + DGVVTV+KA G+Y
Sbjct: 13 YSSLAADIIKNVGGKENVESLRHCVTRLRFRLIDESIANDEVIKNMDGVVTVMKAMGEYM 72
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADD-DAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
VVIG HV DVY+ V G+ + + + +A + + ++ + + G P L L A
Sbjct: 73 VVIGEHVADVYDEVCSQLGLDAMQAENKEQKNAKKKSPLEKVLGTIMGGMGPTLHLLCAC 132
Query: 124 GMIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
G+IKG++ ++ +G+ TDG Y+++NAAGD F FLPLIL AK+F+++ F L +
Sbjct: 133 GIIKGLLVLLTFVGIKPTDGIYMLMNAAGDCFFYFLPLILGFNFAKKFQIDPFFGLILAA 192
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
A+ YP I + L+ T +Y ST LP++ + A
Sbjct: 193 AMCYPAIQ---NVDINLWGYVVNT--------------------TYTSTFLPILFGLLAA 229
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
+ K F K++P ++K F+ P TL+I PL F+VIGP+ + + + T I +FSP+
Sbjct: 230 VPLYKWFDKVLPKMIKGFMTPMLTLIIIFPLTFIVIGPLANMIGAGLNVVLTSICEFSPL 289
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKG-PGVILVASIAICFAQAGALLNIMMRT 362
L G++LG WQ+ V+FG+H L A ++L G P +L S FA G LL+I+++T
Sbjct: 290 LAGLILGGCWQIFVLFGIHGVLTIFAFMDLLAGNPSQLLAFSYGASFATCGVLLSIILKT 349
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
K+ K++++++P+FISA+FGVTEP YG+TLP + F + CI GA +G +A ++ M
Sbjct: 350 KDAKLKEVALPSFISAIFGVTEPGTYGVTLPRKKMFAICCIGGAASGVVVALSNLAMYSY 409
Query: 423 GGMGLFAIPSFIEASNSMTL---IHFLIAIVANFVLGFGL--------------TQLIKI 465
GMG+ + F+ + + ++ V +FVLG + T + +
Sbjct: 410 AGMGIIGLLGFVNPDGPNFIGIALSAIVPFVVSFVLGMLVYKDSDYEYLNDVVETDIKSV 469
Query: 466 PNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGV 525
+K+AA +L EKE ++ P G + L + D FA+ A+GKG
Sbjct: 470 SKEEKTEEKKEAAPALLKEKE---------MLAMPADGMIKPLSEAADEAFANEALGKGC 520
Query: 526 AIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQG 585
+ P G V AP DG +R+LFPT HAIGLA++ G E LIH+G++TV LDGK F HV QG
Sbjct: 521 LVIPENGNVYAPFDGTVRVLFPTKHAIGLASEGGCEALIHIGINTVNLDGKYFETHVQQG 580
Query: 586 SKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQI 624
VKKGQLL+SF+ + I++ GY P+I+TNT Y I
Sbjct: 581 DCVKKGQLLVSFEKEKIEQEGYSCEIPVIITNTDEYLDI 619
>gi|75242490|ref|ZP_00726234.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Escherichia coli F11]
Length = 603
Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 244/623 (39%), Positives = 366/623 (58%), Gaps = 29/623 (4%)
Query: 26 VHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIGNHVPDVYETVLKVAGIS 85
+HC TRLRF LKDESKA + L K G++ VV++GGQ+QVVIGNHV DV+ V VAG+
Sbjct: 1 MHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQVVIGNHVADVFLAVNSVAGL- 59
Query: 86 GEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMIKGVVAIMAALG-VAKTDGA 144
GE + A ++ +GNL +RF+ ++SG+F P++G ++A G++KG++A+ + G
Sbjct: 60 GEKAQQAPENDDKGNLLNRFVYVISGIFTPLIGLMAATGILKGMLALALTFQWTTEQSGT 119
Query: 145 YVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLF 204
Y++L +A D LF F P+IL TA KRF N FTA+ IG ALV+P I +F + + L
Sbjct: 120 YLILFSASDALFWFFPIILGYTAGKRFSGNPFTAMVIGGALVHPLILTAFENGQKVDALG 179
Query: 205 AGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVP 264
F G+P+ +Y S+V+P+I + W + +E+ +P +K F P
Sbjct: 180 L----------DFLGIPVTL--LNYSSSVIPIIFSAWLCSILERRLNAWLPSAIKNFFTP 227
Query: 265 FFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWG 324
L++ P+ FL++GP+ +W S+L+ A + +Y P G V+G WQ+ VMFGLHWG
Sbjct: 228 LLCLMVITPITFLLVGPLSTWISELIAAGYLWLYQAVPAFAGAVMGGFWQIFVMFGLHWG 287
Query: 325 LVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVT 383
L+PL I G ++ + AQ GA L + + ++ + + ++ A ++ LFG+T
Sbjct: 288 LIPLIINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCERDAQKKVVAGSAALTGLFGIT 347
Query: 384 EPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFA----IPSF-IEASN 438
EPA+YG+ LP + PF++ CISGAL + + K+ G G+F IPS I+ +
Sbjct: 348 EPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVYSFGLPGIFTFMQTIPSTGIDFTV 407
Query: 439 SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDSEKERVSAGITEQVVT 498
++I +IAI FV G + I ++ +A+ EK + +
Sbjct: 408 WASVIGGVIAIGCAFV-GTVMFHFIT--------AKSQSAQVAQQEKTPEVITPEQGGIC 458
Query: 499 SPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDD 558
SP+ GE+V L D FASG +GKG+AI PSVGEV +P G I LF T HAIG+ +DD
Sbjct: 459 SPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIASLFATLHAIGIESDD 518
Query: 559 GAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNT 618
G E+LIHVG+DTV LDGK F+AHV G KV G L+SFDI I+EAG+ +TTP++++N+
Sbjct: 519 GVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIREAGFDLTTPVLISNS 578
Query: 619 ANYKQIEVLAKGEIQLGNQLLEL 641
++ + +I G LL +
Sbjct: 579 DDFTDVLPHGTAQINAGEPLLSI 601
>gi|110807583|ref|YP_691103.1| PTS system beta-glucosides, enzyme II, cryptic [Shigella flexneri 5
str. 8401]
gi|110617131|gb|ABF05798.1| PTS system beta-glucosides, enzyme II, cryptic [Shigella flexneri 5
str. 8401]
Length = 604
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 242/619 (39%), Positives = 363/619 (58%), Gaps = 20/619 (3%)
Query: 26 VHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIGNHVPDVYETVLKVAGIS 85
+HC TRLRF LKDESKA + L K G++ VV++GGQ+QVVIGNHV DV+ V VAG+
Sbjct: 1 MHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQVVIGNHVADVFLAVNSVAGL- 59
Query: 86 GEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMIKGVVAIMAALG-VAKTDGA 144
GE + A ++ +GNL +RF+ ++SG+F P++G ++A G++KG++A+ + G
Sbjct: 60 GEKAQQAPENDEKGNLLNRFVYVISGIFTPLIGLMAATGILKGMLALALTFQWTTEQSGT 119
Query: 145 YVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLF 204
Y++L +A D LF F P+IL TA KRF N FTA+ IG ALV+P I +F
Sbjct: 120 YLILFSASDALFGFFPIILGYTAGKRFGGNPFTAMVIGGALVHPLILTAFEN-------- 171
Query: 205 AGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVP 264
G ++P F G+P+ +Y S+V+P+I + W + +E+ +P +K F P
Sbjct: 172 -GQKADAPGLD-FLGIPVTL--LNYSSSVIPIIFSAWLCSILERRLNAWLPSAIKNFFTP 227
Query: 265 FFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWG 324
L++ P+ FL++GP+ +W S+++ A + +Y P G V+G WQ+ VMFGLH G
Sbjct: 228 LLCLMVITPVTFLLVGPLSTWISEMIAAGYLWLYQAVPAFAGAVMGGFWQIFVMFGLHRG 287
Query: 325 LVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVT 383
LVPL I G ++ + AQ GA L + + ++ + + ++ A ++ LFG+T
Sbjct: 288 LVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCERDAQKKVVAGSAALTGLFGIT 347
Query: 384 EPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLI 443
EPA+YG+ LP + PF++ CISGAL + + K+ GL +I +F++ S +
Sbjct: 348 EPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVY---SFGLPSIFTFMQTIPSTGID 404
Query: 444 HFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDSEKERVSAGITEQV-VTSPLA 502
+ A V V+ G + L S++ A+ EK EQ + SP+
Sbjct: 405 FTVWASVIGGVIAIGCA-FVGTLMLHFITSKRQPAQGAPQEKTPEVITPPEQGGICSPMT 463
Query: 503 GEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAEL 562
GE+V L D FASG +GKG+AI PSVGEV +P G I LF T HAIG+ +DDG E+
Sbjct: 464 GEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIASLFATLHAIGIESDDGVEI 523
Query: 563 LIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYK 622
LIHVG+DTV LDGK F+AHV G KV G L+SFDI I+EAG+ +TTP++++N+ ++
Sbjct: 524 LIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIREAGFDLTTPVLISNSDDFT 583
Query: 623 QIEVLAKGEIQLGNQLLEL 641
+ +I G LL +
Sbjct: 584 DVLPHGTAQISAGEPLLSI 602
>gi|126698396|ref|YP_001087293.1| PTS system, IIabc component [Clostridium difficile 630]
gi|115249833|emb|CAJ67650.1| PTS system, IIabc component [Clostridium difficile 630]
Length = 625
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 241/654 (36%), Positives = 373/654 (57%), Gaps = 51/654 (7%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +A++I+ +VGGK+N+ ++ HC+TRLRF +K SK + D L K +GV+TVV++ GQ
Sbjct: 2 DYKNIAQEILLNVGGKENVNEVTHCMTRLRFKVKSASKVNKDKLSKTEGVITVVESMGQI 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QVVIGN V VY+ V+K+ S + +G + + ++ V+G+F P + ++
Sbjct: 62 QVVIGNKVKKVYDEVIKIVPQSNNIGKKNESQEKQG-IINSILSAVAGIFTPTIPAIAGV 120
Query: 124 GMIKGVVAIMAAL-----GV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFT 177
GMIKG+++++A GV K +Y++LNA D +F F+P+IL TAAK F N+
Sbjct: 121 GMIKGILSVLAMYYMNKNGVDIKETQSYIILNAMADSIFYFMPIILGYTAAKVFNANKII 180
Query: 178 ALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVI 237
++ +G L YP A E+ + F GL + ++Y S+V+P+I
Sbjct: 181 SMVLGATLCYPTFTALMAGEESV---------------RFLGLAVT--KATYTSSVIPII 223
Query: 238 AAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGI 297
A+WA + +EK +K IP+V+K+ +VP +L++ +P + GP+ + +++ + I
Sbjct: 224 IAIWALSYVEKVLEKYIPEVIKIIMVPTLSLVVMLPATLFLFGPIGIYIGNVINFSYKYI 283
Query: 298 YDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALL 356
Y+ SP L G +G W VLV+FG H L+P+ I ++ Q G +L + A F+QAGA L
Sbjct: 284 YELSPALCGAFVGGLWCVLVIFGAHRALLPIGISDVAQTGRQNLLAFAGAANFSQAGAAL 343
Query: 357 NIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFD 416
+ +TK + ++ +S+ A I+ALFG+TEPAIYG L ++ P + I GA GA +
Sbjct: 344 GVFFKTKNQGLKTISMSATITALFGITEPAIYGANLRLKKPMVCAVICGAFGGAIMGMGG 403
Query: 417 VKMQVMGGMGLFAIPSFIEASNSMTL-------IHFLIAIVANFVLGFGLTQLIKIPNLF 469
G+ IP + EA L I F + ++ +++GF
Sbjct: 404 AYGNAFANQGVLTIPVYAEAGALGFLSYLGGCAIAFFGSAISTYLVGF------------ 451
Query: 470 GGPSEKDAAESLDSEKERVSAGITEQVV--TSPLAGEVVALEDTPDAVFASGAMGKGVAI 527
+D ES + E + + V+ TSP+ GE + L + D VFAS AMG+G+A+
Sbjct: 452 -----EDLEESSNKENSSIKVETKDGVIDITSPVEGECIELSEVKDDVFASKAMGEGIAV 506
Query: 528 EPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSK 587
P+ G + AP D + LFPT HAIGL D+GAE+LIHVG++TV L+GK FT HV QG
Sbjct: 507 LPTKGVITAPTDCEVASLFPTLHAIGLKLDNGAEMLIHVGINTVELNGKYFTKHVNQGDL 566
Query: 588 VKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
VKKG L+SFDID IK+AGY VTTP+IV NT ++ Q+ + + ++ L
Sbjct: 567 VKKGDKLISFDIDKIKKAGYDVTTPVIVNNTFDFGQVVSCKSSYVSTNDNIISL 620
>gi|1432153|gb|AAB51563.1| cellobiose-specific PTS permease [Klebsiella oxytoca]
Length = 621
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 260/648 (40%), Positives = 375/648 (57%), Gaps = 36/648 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y LA+DI+ VGG++NI LVHC TRLRF LKD KAD + L GV+ VV++GGQ+
Sbjct: 2 EYKALAQDILTRVGGRENIVSLVHCATRLRFKLKDSKKADAEGLKANPGVIMVVESGGQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG---NLFDRFIALVSGLFQPMLGTL 120
QVVIGNHV DV+ V AG++ D++ AV+G +L + I +VSG+F P +G L
Sbjct: 62 QVVIGNHVHDVWLAVRSEAGLTD----DSEPVAVKGEKVSLIGQLIDIVSGIFTPFIGVL 117
Query: 121 SAAGMIKGVVAIMAALGVAKTDGA-YVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
+A+G++KG++A+ G T A Y + AA D LF F PL L TA K+F N + +
Sbjct: 118 AASGILKGLLALAVVCGWLTTQQATYKIWFAASDALFFFFPLFLGYTAGKKFGGNPYITM 177
Query: 180 AIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAA 239
IG AL +P + +F A ++ G E F G+P+ F +Y S+V+P+I A
Sbjct: 178 VIGGALTHPLMIQAFDA-----SMAPGAATE-----YFLGIPVTF--INYSSSVIPIILA 225
Query: 240 VWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD 299
W IEK I+P +K F P L + VPL FL+IGPV +W S L+ + IY
Sbjct: 226 SWVSCWIEKRSNAILPSSMKNFFTPAICLAVVVPLTFLIIGPVATWLSQLLANGYQLIYQ 285
Query: 300 FSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNI 358
+P L G +GA WQV V+FGLHWGL+PL I L G ++ + Q GA L I
Sbjct: 286 VAPWLAGAAMGALWQVCVIFGLHWGLIPLMINNLAVLGHDSMMPMLLPAVMGQVGAALGI 345
Query: 359 MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFD-- 416
+RT++ + + L+ A + +FGVTEPAIYG+ LP+R PFI C+ + GA + F D
Sbjct: 346 FLRTRDARQKVLAGSAVSAGIFGVTEPAIYGLNLPLRRPFIFGCVYWPIGGAMVGFSDSH 405
Query: 417 VKMQVMGGMGLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEK 475
V G + + I T+ + A+ ++ LT + +P +
Sbjct: 406 VSTYSFGFGNIITLAQMIPPEGIDATVWGGAAGMFASLIIACVLTLVAGLP--------R 457
Query: 476 DAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVV 535
+AE + V A + + +P+ G V+AL+ PD+ FASG +G+GVAI PSVG+V+
Sbjct: 458 SSAE----QAAVVVAPASVNDILAPMTGSVLALDQVPDSTFASGLLGQGVAIIPSVGKVI 513
Query: 536 APADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLL 595
AP G + +F T HAIGL +D G ELLIHVG+DTV LDG FTAHV +G K+K G LLL
Sbjct: 514 APFSGEVASIFQTKHAIGLLSDSGIELLIHVGIDTVKLDGAPFTAHVKEGDKIKAGDLLL 573
Query: 596 SFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
FD I +AGY + TPII++N+ +++ +++++ + G LL + +
Sbjct: 574 EFDRQAILDAGYDLATPIIISNSDDFRTLDMVSASAVDAGQPLLSVSR 621
>gi|16802780|ref|NP_464265.1| hypothetical protein lmo0738 [Listeria monocytogenes EGD-e]
gi|47095303|ref|ZP_00232914.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes str. 1/2a F6854]
gi|153178832|ref|ZP_01932119.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes F6900]
gi|153184169|ref|ZP_01934952.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes J0161]
gi|153195374|ref|ZP_01940172.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes 10403S]
gi|16410127|emb|CAC98816.1| lmo0738 [Listeria monocytogenes]
gi|47016374|gb|EAL07296.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes str. 1/2a F6854]
gi|126943233|gb|EBA20962.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes J0161]
gi|127634977|gb|EBA24357.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes 10403S]
gi|133733520|gb|EBA35218.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes F6900]
Length = 617
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 238/640 (37%), Positives = 368/640 (57%), Gaps = 32/640 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +LAK+I+A+VGG++N+ +VHC TRLRF L ++ KAD + GV++VV+ GQ
Sbjct: 2 DYQKLAKEILANVGGEENVRSVVHCATRLRFKLVNKEKADKKQIESISGVISVVENAGQL 61
Query: 64 QVVIGNHVPDVYETVLKVAGIS--GEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLS 121
QV+IGN V DVY+ + ++ G+ + +GN + I ++SG+F P+LG L+
Sbjct: 62 QVIIGNTVGDVYKALGSFTKLTDDGDSEIAKGTKDSDGNFLSKAIDVISGIFTPILGALA 121
Query: 122 AAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
GM+KG++ I+ G + ++ G Y +L AA D +F FLPLILA TAA++F N A+A
Sbjct: 122 GGGMLKGLLMILTTFGWLTESSGTYQILYAAADSVFYFLPLILAYTAARKFGANPPVAIA 181
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
ALVYP + F + TF +P++ SY +V+P+I AV
Sbjct: 182 AAGALVYPTMINLFNEGAHI---------------TFLQIPVVL--MSYSFSVIPIILAV 224
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
W + +E+ I + K F+ P L++ VPL FL GP+ ++ S + + +T IY+
Sbjct: 225 WFLSILERFLNSKIHEAAKTFLTPMICLMLIVPLTFLAFGPLGTFISQGLASGYTFIYNL 284
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC-FAQAGALLNIM 359
SP++ G +GA WQVLV+FG+HWG VP+ I L + ++A + FAQAGA L +
Sbjct: 285 SPIVAGAFMGAFWQVLVIFGIHWGFVPIMINNLSRYGRDTMIAMVGPSNFAQAGASLGVF 344
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
++TK+ +V+ ++ A ++ FG+TEP+IYG+TL + PF++ I+GA+ GA +
Sbjct: 345 LKTKKPEVKAIAGSAALTGFFGITEPSIYGVTLKYKKPFVIASIAGAIGGAIVGAAGSSG 404
Query: 420 QVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
G+ +P FI + F++ I ++L I F G ++ A
Sbjct: 405 AANAIPGILTLPIFIGKG----FVGFILGIAVAYILS-------AIGTYFFGYKDEMADG 453
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ KE G+ +V+ SP+ G +V L + D F++G +GKGVAI P G++++P +
Sbjct: 454 IAPTTKEAKETGVEAEVIVSPIRGNIVPLNEVKDEAFSAGLLGKGVAIVPQEGKLISPVN 513
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G I FPT HAIG+ +D G E+L+HVG DTV L+GK F V QG +V GQ LL FD+
Sbjct: 514 GTIETAFPTGHAIGIRSDKGVEILLHVGFDTVQLNGKYFKLLVAQGDRVLVGQALLEFDL 573
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
+ IK GY +TTPI+VTNT Y + + + + + LL
Sbjct: 574 EAIKADGYDITTPIVVTNTDAYLDVLISDQKTVNYEDTLL 613
>gi|153173659|ref|ZP_01929373.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes FSL N3-165]
gi|133730739|gb|EBA32437.1| PTS system, glucose subfamily, IIA component domain protein
[Listeria monocytogenes FSL N3-165]
Length = 617
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 238/640 (37%), Positives = 368/640 (57%), Gaps = 32/640 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +LAK+I+A+VGG++N+ +VHC TRLRF L ++ KAD + GV++VV+ GQ
Sbjct: 2 DYQKLAKEILANVGGEENVRSVVHCATRLRFKLVNKEKADKKQIESISGVISVVENAGQL 61
Query: 64 QVVIGNHVPDVYETVLKVAGIS--GEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLS 121
QV+IGN V DVY+ + ++ G+ + +GN + I ++SG+F P+LG L+
Sbjct: 62 QVIIGNTVGDVYKALGSFTKLTDDGDSEIAKGTKDSDGNFLSKAIDVISGIFTPILGALA 121
Query: 122 AAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
GM+KG++ I+ G + ++ G Y +L AA D +F FLPLILA TAA++F N A+A
Sbjct: 122 GGGMLKGLLMILTTFGWLTESSGTYQILYAAADSVFYFLPLILAYTAARKFGANPPVAIA 181
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
ALVYP + F + TF +P++ SY +V+P+I AV
Sbjct: 182 AAGALVYPTMINLFNEGAHI---------------TFLQIPVVL--MSYSFSVIPIILAV 224
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
W + +E+ I + K F+ P L++ VPL FL GP+ ++ S + + +T IY+
Sbjct: 225 WFLSILERFLNSKIHEAAKTFLTPMICLMLIVPLTFLAFGPLGTFISQGLASGYTFIYNL 284
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC-FAQAGALLNIM 359
SP++ G +GA WQVLV+FG+HWG VP+ I L + ++A + FAQAGA L +
Sbjct: 285 SPIVAGAFMGAFWQVLVIFGIHWGFVPIMINNLSRYGRDTMIAMVGPSNFAQAGASLGVF 344
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
++TK+ +V+ ++ A ++ FG+TEP+IYG+TL + PF++ I+GA+ GA +
Sbjct: 345 LKTKKPEVKAIAGSAALTGFFGITEPSIYGVTLKYKKPFVIASIAGAIGGAIVGAAGSSG 404
Query: 420 QVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
G+ +P FI + F++ I ++L I F G ++ A
Sbjct: 405 AANAIPGILTLPIFIGKG----FVGFILGIAVAYILS-------AIGTYFFGYKDEMADG 453
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ KE G+ +V+ SP+ G +V L + D F++G +GKGVAI P G++++P +
Sbjct: 454 IAPTIKEAKETGVEAEVIVSPIRGNIVPLNEVKDEAFSAGLLGKGVAIVPQEGKLISPVN 513
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G I FPT HAIG+ +D G E+L+HVG DTV L+GK F V QG +V GQ LL FD+
Sbjct: 514 GTIETAFPTGHAIGIRSDKGVEILLHVGFDTVQLNGKYFKLLVAQGDRVLVGQALLEFDL 573
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
+ IK GY +TTPI+VTNT Y + + + + + LL
Sbjct: 574 EAIKADGYDITTPIVVTNTDAYLDVLISDQKTVNYEDTLL 613
>gi|145296705|ref|YP_001139526.1| hypothetical protein cgR_2610 [Corynebacterium glutamicum R]
gi|140846625|dbj|BAF55624.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 668
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 239/660 (36%), Positives = 379/660 (57%), Gaps = 34/660 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY L+ +I++ +GG++N++ +VHC TRLRF LKD SKA+ D + K GV+TVV++GGQ+
Sbjct: 6 DYQALSGEIMSRIGGEENVSSVVHCATRLRFVLKDRSKANDDEIKKLPGVITVVESGGQF 65
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QVVIGN+VP VY + EG+ GN + + +VS +F P+LG ++
Sbjct: 66 QVVIGNNVPQVYAALPASITADSEGAAQGGG---SGNFLGKAVDIVSSIFAPILGPMAGV 122
Query: 124 GMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
G++KG++A+ AA V T Y +L AAGD F FLP+ILAITAA++F N FT++A+
Sbjct: 123 GILKGLLAVAAAAHWVDTTSTTYQILYAAGDAFFMFLPVILAITAARKFGANVFTSVALA 182
Query: 183 FALVYPNIAAS---FTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAA 239
AL+Y + A E TL A + + TF G+P++ SY STV+P+I A
Sbjct: 183 GALLYTQLQAVTVLVDGEVQSMTLLAFQKAGNDV--TFLGIPVVL--QSYTSTVIPIIIA 238
Query: 240 VWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD 299
VW + +E+ K++ + ++ FI+P L + VPL +GP W + + A+ YD
Sbjct: 239 VWVQSLLERQVAKVLHESIRNFILPMVVLAVMVPLTLATLGPAGVWIGNGLAAVLQSAYD 298
Query: 300 FSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALLNI 358
FSP++ GI++ WQV+V+FG+HWG+VP+ I + G + A +QAGA +
Sbjct: 299 FSPIVSGILIAMLWQVMVIFGVHWGIVPVFINNISINGFDPLKAACFPAVLSQAGAAFGL 358
Query: 359 MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVK 418
+R ++++ + LS A ++ +FG+TEPA+YG+TLP + PF++ IS + GA +
Sbjct: 359 FLRLRDKQQKALSGSAALAGIFGITEPAVYGVTLPRKRPFVIAVISAGVGGAIIGATSTM 418
Query: 419 MQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVA-NFVLGFGLTQLIKIPNLFGGPSE--- 474
+ G GL +P I+ S + I +LI A +FVL LT FG E
Sbjct: 419 VYGTGAPGLLTLPIGIDPSGANNTIGWLIGGTAVSFVLAAVLTYF------FGMTKEDLV 472
Query: 475 KDAAESLDSE------------KERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMG 522
KDA + D + T +++P+ G +V+L + D VF+SG MG
Sbjct: 473 KDATAAADQKLAAEVDAEAEEAAPVAEGEFTSVALSTPVEGTLVSLTEVNDPVFSSGKMG 532
Query: 523 KGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHV 582
G+ + PS G++ AP D +++ T HA GL T G ++LIH+G+DTV+L G+GF AH+
Sbjct: 533 DGIVVLPSSGKIYAPCDATVKVAMKTGHAFGLRTSGGVDVLIHIGIDTVSLAGEGFIAHI 592
Query: 583 VQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
+G VK G LL D+D ++E G +T ++VTN++ ++ G + +G ++++++
Sbjct: 593 QRGDCVKAGDLLAEVDLDLLREKGLDPSTILLVTNSSKFRVETSTVFGPVNVGQEVIQVQ 652
>gi|116618010|ref|YP_818381.1| Trehalose PTS trehalose component IIBC [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096857|gb|ABJ62008.1| Trehalose PTS trehalose component IIBC [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 612
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 244/643 (37%), Positives = 373/643 (58%), Gaps = 38/643 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY LA +I+A VGGKDNI HC TRLRF LKDESKADT+ + DGV+TVVK+ GQY
Sbjct: 2 DYGVLANNILAGVGGKDNIGSAWHCATRLRFKLKDESKADTEKIENMDGVITVVKSAGQY 61
Query: 64 QVVIGNHVPDVYETVLKVAGIS-GEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
QVVIGN+V V+E + G++ + D ++ + N+ +RFI +S +F P LG ++
Sbjct: 62 QVVIGNNVARVFEPLADAIGLARDDAQSDNQEEKKKDNIVNRFIGFISSVFTPFLGAMAG 121
Query: 123 AGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAI 181
G++KG++A+ LG + ++ G Y + AAGD F FLP+ LA TAA K+NQ+ A A+
Sbjct: 122 TGVLKGLLALFVTLGWLQESSGTYQIWYAAGDAFFYFLPVWLAFTAAAHLKVNQYVAAAL 181
Query: 182 GFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVW 241
AL+YPN+ KP+ TF GL ++ ++Y S+V+P++ AVW
Sbjct: 182 AGALLYPNLITLLAGSKPV---------------TFLGLTVV--GTTYSSSVIPILLAVW 224
Query: 242 AGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFS 301
+ ++ K D V+ P +L+I VP+ LV+GP+ + ++ + +Y +
Sbjct: 225 MLSYLQPILDKFFHDSVRNIFTPMVSLIIMVPVTLLVVGPLGTSVGTVLSSSVESVYRVA 284
Query: 302 PVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMM 360
P G V+GA WQV V+FG+HW VP+ + Q G +L AQ+GA L + +
Sbjct: 285 PYAAGAVMGALWQVFVIFGVHWTFVPVMTNNISQLGYDYLLPMLSVAVLAQSGAALGVFL 344
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
+TK+ K++ L+ + ++ + G+TEPAIYG+TL ++ PFI I+G + GA
Sbjct: 345 KTKDAKMKSLAGSSVLTGVLGITEPAIYGVTLKLKRPFIFATIAGGIGGAIAGGGGAHAN 404
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSE-KDAAE 479
L A+P+++ + +I ++A + + V + LFG PS+ KD+
Sbjct: 405 AFALPSLLALPTYLGKGFTSVVIGLVVAFILSAVATY----------LFGVPSQPKDSKT 454
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ +E I + +V +P++G ++ LE D VFASGAMGKG+AI P ++V+P
Sbjct: 455 DAKNPEE-----IQDDLVIAPVSGTIIPLESVKDEVFASGAMGKGIAIVPDDDQIVSPIV 509
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + ++P+ HAIGL ++ G E+LIHVG+DTV L+GK F V QG KV G L++FD
Sbjct: 510 GTVAAVYPSKHAIGLISNGGVEVLIHVGIDTVQLNGKHFNQLVEQGQKVSVGTPLITFDR 569
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
I+EAGY T +I+TNTA+Y+ E + + N LL+LK
Sbjct: 570 QAIQEAGYDPTVMVIITNTADYEITE--TQDTVANQNWLLQLK 610
>gi|16080978|ref|NP_391806.1| phosphotransferase system (PTS) beta-glucoside-specific enzyme
IIBCA component [Bacillus subtilis subsp. subtilis str.
168]
gi|603778|dbj|BAA06652.1| hypothetical protein [Bacillus subtilis]
gi|849025|dbj|BAA06256.1| hypothetical 64.7-kDa protein [Bacillus subtilis]
gi|2636473|emb|CAB15963.1| phosphotransferase system (PTS) beta-glucoside-specific enzyme
IIBCA component [Bacillus subtilis subsp. subtilis str.
168]
Length = 609
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 240/641 (37%), Positives = 381/641 (59%), Gaps = 37/641 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +L+KDI+ VGG++N+ +++HC+TRLRF+L D +KAD L + GV+ +G Q+
Sbjct: 2 DYDKLSKDILQLVGGEENVQRVIHCMTRLRFNLHDNAKADRSQLEQLPGVMGTNISGEQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
Q++IGN VP VY+ +++ + +S E S A + + N+ ++SG+F P+L ++ A
Sbjct: 62 QIIIGNDVPKVYQAIVRHSNLSDEKS--AGSSSQKKNVLSAVFDVISGVFTPILPAIAGA 119
Query: 124 GMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GMIKG+VA+ G +A+ +V+L A GDG F FLPL+LA++AA++F N + A AI
Sbjct: 120 GMIKGLVALAVTFGWMAEKSQVHVILTAVGDGAFYFLPLLLAMSAARKFGSNPYVAAAIA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
A+++P++ A A KP+ +F GLP+ A++Y STV+P++ ++W
Sbjct: 180 AAILHPDLTALLGAGKPI---------------SFIGLPVT--AATYSSTVIPILLSIWI 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+ +EK + +K+ +VP FTLLI VPL + +GP+ + + + + ++D +
Sbjct: 223 ASYVEKWIDRFTHASLKLIVVPTFTLLIVVPLTLITVGPLGAILGEYLSSGVNYLFDHAG 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMMR 361
++ I L + +++M G+H+ VP+ I + Q G +L A QAGA + +R
Sbjct: 283 LVAMIFLAGTFSLIIMTGMHYAFVPIMINNIAQNGHDYLLPAMFLANMGQAGASFAVFLR 342
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
++ +K + L++ I+AL G+TEPA+YG+ + ++ PF I GA GA+ V +
Sbjct: 343 SRNKKFKSLALTTSITALMGITEPAMYGVNMRLKKPFAAALIGGAAGGAFYGMTGVASYI 402
Query: 422 MGG-MGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+GG GL +IP FI T I+ +I +V F G L+ ++ PS +
Sbjct: 403 VGGNAGLPSIPVFI----GPTFIYAMIGLVIAFAAGTSAAYLLGFEDV---PSHR----- 450
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
S++ V G + +++ SP+ GEV AL + D VF++G MGKG AIEP GEVV+P G
Sbjct: 451 --SQQPAVHEG-SREIIHSPIKGEVKALSEVKDGVFSAGVMGKGFAIEPEEGEVVSPVRG 507
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
+ +F T HAIG+ +D GAE+LIH+G+DTV L+G+ FTAH+ + KV G L+SFD++
Sbjct: 508 SVTTIFKTKHAIGITSDQGAEILIHIGLDTVKLEGQWFTAHMKESDKVAPGDPLVSFDLE 567
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
IK AGY V TP+IVTNT Y V G++Q LL L
Sbjct: 568 QIKAAGYDVITPVIVTNTDQYSFSPVKEIGKVQPKEALLAL 608
>gi|730418|sp|P40739|PTV3B_BACSU PTS system beta-glucoside-specific EIIBCA component (EIIBCA-Bgl)
(EII-Bgl) [Includes: Beta-glucoside-specific
phosphotransferase enzyme IIB component (PTS system
beta-glucoside-specific EIIB component); Beta-glucoside
permease IIC component (PTS system
beta-glucoside-specific EIIC component);
Beta-glucoside-specific phosphotransferase enzyme IIA
component (PTS system beta-glucoside-specific EIIA
component)]
gi|505576|emb|CAA84286.1| beta-glucoside permease [Bacillus subtilis]
Length = 609
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 240/641 (37%), Positives = 382/641 (59%), Gaps = 37/641 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +L+KDI+ VGG++N+ +++HC+TRLRF+L D +KAD L + GV+ +G Q+
Sbjct: 2 DYDKLSKDILQLVGGEENVQRVIHCMTRLRFNLHDNAKADRSQLEQLPGVMGTNISGEQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
Q++IGN VP VY+ +++ + +S E S A + + N+ ++SG+F P+L ++ A
Sbjct: 62 QIIIGNDVPKVYQAIVRHSNLSDEKS--AGSSSQKKNVLSAVFDVISGVFTPILPAIAGA 119
Query: 124 GMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GMIKG+VA+ G +A+ +V+L A GDG F FLPL+LA++AA++F N + A AI
Sbjct: 120 GMIKGLVALAVTFGWMAEKSQVHVILTAVGDGAFYFLPLLLAMSAARKFGSNPYVAAAIA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
A+++P++ A A KP+ +F GLP+ A++Y STV+P++ ++W
Sbjct: 180 AAILHPDLTALLGAGKPI---------------SFIGLPVT--AATYSSTVIPILLSIWI 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+ +EK + +K+ +VP FTLLI VPL + +GP+ + + + + ++D +
Sbjct: 223 ASYVEKWIDRFTHASLKLIVVPTFTLLIVVPLTLITVGPLGAILGEYLSSGVNYLFDHAG 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMMR 361
++ I+L + +++M G+H+ VP+ I + Q G +L A QAGA + +R
Sbjct: 283 LVAMILLAGTFSLIIMTGMHYAFVPIMINNIAQNGHDYLLPAMFLANMGQAGASFAVFLR 342
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
++ +K + L++ I+AL G+TEPA+YG+ + ++ PF I GA GA+ V +
Sbjct: 343 SRNKKFKSLALTTSITALMGITEPAMYGVNMRLKKPFAAALIGGAAGGAFYGMTGVASYI 402
Query: 422 MGG-MGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+GG GL +IP FI T I+ +I +V F L+ ++ PS+
Sbjct: 403 VGGNAGLPSIPVFI----GPTFIYAMIGLVIAFAAETAAAYLLGFEDV---PSD------ 449
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
S++ V G + +++ SP+ GEV AL + D VF++G MGKG AIEP GEVV+P G
Sbjct: 450 -GSQQPAVHEG-SREIIHSPIKGEVKALSEVKDGVFSAGVMGKGFAIEPEEGEVVSPVRG 507
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
+ +F T HAIG+ +D GAE+LIH+G+DTV L+G+ FTAH+ +G KV G L+SFD++
Sbjct: 508 SVTTIFKTKHAIGITSDQGAEILIHIGLDTVKLEGQWFTAHIKEGDKVAPGDPLVSFDLE 567
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
IK AGY V TP+IVTNT Y V G++Q LL L
Sbjct: 568 QIKAAGYDVITPVIVTNTDQYSFSPVKEIGKVQPKEALLAL 608
>gi|6851033|emb|CAB71150.1| permease [Lactobacillus plantarum]
Length = 577
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 234/610 (38%), Positives = 361/610 (59%), Gaps = 41/610 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY+ELA+ I+ ++GGKDNI+K HC TRLRF+LK KA+T+ + DGV+TVV++ GQY
Sbjct: 2 DYSELAQSILTNIGGKDNISKAWHCATRLRFNLKSTDKANTEAIENLDGVITVVQSAGQY 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAV-----EGNLFDRFIALVSGLFQPMLG 118
QVVIGN V V+ + +AG++ + + N+ +RFIA +SG+F P LG
Sbjct: 62 QVVIGNAVAQVFAALADLAGLANPDTAADAATTTEDTGEKQNIINRFIAFISGIFTPFLG 121
Query: 119 TLSAAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFT 177
L+ AG++KG++A+ A ++ T GAY + +AGD +F FLP+ LA TAAK+ K+NQF
Sbjct: 122 ALAGAGILKGLLALAVAFNWMSTTSGAYKIWYSAGDAIFYFLPVFLAFTAAKQLKVNQFV 181
Query: 178 ALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVI 237
A+++G AL+YP + T L+ FFG+P++ ++Y STV+P++
Sbjct: 182 AVSLGAALLYPTLVTVMTNSTTLH---------------FFGIPVV--PTTYTSTVIPIL 224
Query: 238 AAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGI 297
AVW + +E K+ P ++ P F+L+I VPL LV GP+ + + + I
Sbjct: 225 LAVWVLSYLEPVLDKLFPAAIRNIFTPLFSLIIMVPLTLLVDGPIGGLIGNGLASGVMAI 284
Query: 298 YDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALL 356
Y+F P+ G+++GA WQV V+FG+HW VPL + + K G +L A +QAGA L
Sbjct: 285 YNFMPIGAGVIMGAFWQVFVIFGVHWTFVPLMMNNIAKMGYDPLLPILSAAVLSQAGAAL 344
Query: 357 NIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFD 416
+ ++++++K++ L+ +F++ALFG+TEP IYG+TL ++ PF + GAL GA +
Sbjct: 345 AVFLKSRDQKMKALAGSSFVTALFGITEPTIYGVTLKLKRPFYCAVVGGALGGAIIGAAG 404
Query: 417 VKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKD 476
L A+P+F+ +I ++A + +L + FG ++
Sbjct: 405 THASSFTLPSLLAVPTFLGHGFMGEVIGLIVAFLGGAILTY----------FFGFARQQQ 454
Query: 477 AAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVA 536
A S+ S++ ++ V +P+ G ++ L D VFAS AMGKG+AI P+ G V A
Sbjct: 455 ADYSVVSDQ-------SDNTVMAPVEGTIIPLTSVHDEVFASEAMGKGLAIVPNKGTVTA 507
Query: 537 PADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLS 596
P DG I ++PT HAIG+ + GAE+LIH+G++TV L+G+ F V Q VK+G LL
Sbjct: 508 PVDGTITAVYPTGHAIGITANSGAEILIHIGINTVQLNGQYFETMVKQNQVVKRGDLLTK 567
Query: 597 FDIDTIKEAG 606
FD+D IK AG
Sbjct: 568 FDVDKIKTAG 577
>gi|152978649|ref|YP_001344278.1| PTS system, beta-glucoside-specific IIABC subunit [Actinobacillus
succinogenes 130Z]
gi|150840372|gb|ABR74343.1| PTS system, beta-glucoside-specific IIABC subunit [Actinobacillus
succinogenes 130Z]
Length = 627
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 242/636 (38%), Positives = 373/636 (58%), Gaps = 31/636 (4%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MAKD+++LA++I+ VGG+ NI LVHC TRLRF LK+ +KAD L + GV++VV++G
Sbjct: 1 MAKDFSKLAQEILRFVGGEQNIHSLVHCATRLRFVLKERAKADKARLEQTAGVISVVESG 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL 120
GQ+Q+VIGN+VP VY ++K+A I + D + +L +R I ++G F P++G +
Sbjct: 61 GQFQIVIGNNVPKVYAEIMKIADIQAGDAADLP----KPSLINRGIDFLAGSFTPLIGVM 116
Query: 121 SAAGMIKGVVAIMAALGVAK-TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
+ AG++KG++AI+ G+ G + VL+AA F FLP++LAIT A + K + + A+
Sbjct: 117 AGAGILKGLIAILQVSGLLDPASGTFTVLDAAASSTFYFLPILLAITCAAKVKASPYIAV 176
Query: 180 AIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAA 239
A+ ALVYP+I ++ KPL F G + +Y +V+P++ A
Sbjct: 177 AVAAALVYPSIVEVSSSGKPL---------------DFLGFEL--ATMTYTYSVIPILIA 219
Query: 240 VWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD 299
VWA + I++ F+ + + V+ F P TLL+ VPL VIGPV + + +Y
Sbjct: 220 VWAQSYIQRFFENLWHESVRNFFAPACTLLVVVPLTLAVIGPVGGAIGHGIATVLAWLYA 279
Query: 300 FSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNI 358
SP+ G+V+GA WQVLV+FG+HW +VP+ I + G +I + A QAGA +
Sbjct: 280 ASPIATGLVVGALWQVLVIFGIHWSIVPIMINNMAVVGFDLIGPLTAAAVLGQAGATFAV 339
Query: 359 MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVK 418
++++ ++++ L+ S + G+TEP IYGITL + PF+ + GA+ GA + + K
Sbjct: 340 FLKSRNKEIKSLAGSTTFSGVLGITEPLIYGITLRFKKPFVCGVLGGAIGGAVIGWGGTK 399
Query: 419 MQVMGGMGLFAIPSFI-EASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDA 477
M G GL P I E SN ++ + + + F++ LT L + D
Sbjct: 400 MFAFGFSGLLLYPVIIGEGSN---IVMYTVGMAVAFIVAGILTYLFGYSDTMLPQQTADT 456
Query: 478 AESLDS-EKERVSAGITEQV-VTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVV 535
A + RVS E+ + SPL G + L D D +FAS A+GKGVAIEP+ GE++
Sbjct: 457 ATKPEKPNNARVSTIPLEKFNLVSPLEGNIHKLTDIQDPMFASEALGKGVAIEPTKGELI 516
Query: 536 APADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLL 595
+P +G I +FPT HA + +DDG E+LIH+GMDTV L+GK F V G +++ GQ L
Sbjct: 517 SPVNGTISSVFPTKHAYNIVSDDGLEILIHIGMDTVQLNGKHFETFVKDGDRIQVGQRLG 576
Query: 596 SFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGE 631
+FDI+ IK AGY + TP+I+ N+ +Y ++V+A E
Sbjct: 577 TFDINAIKAAGYSIVTPVIIANSEDY--LDVIASQE 610
>gi|52082496|ref|YP_081287.1| phosphotransferase system (PTS) beta-glucoside-specific enzyme
IIBCA component [Bacillus licheniformis ATCC 14580]
gi|52787892|ref|YP_093721.1| BglP [Bacillus licheniformis ATCC 14580]
gi|52005707|gb|AAU25649.1| phosphotransferase system (PTS) beta-glucoside-specific enzyme
IIBCA component [Bacillus licheniformis ATCC 14580]
gi|52350394|gb|AAU43028.1| BglP [Bacillus licheniformis DSM 13]
Length = 614
Score = 384 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 230/631 (36%), Positives = 378/631 (59%), Gaps = 33/631 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +++KDI+ VGG++N+ ++HC+TRLRF+L D +KAD L V+ +G Q+
Sbjct: 2 DYNKVSKDILQLVGGEENVQSVIHCMTRLRFNLYDNAKADRAKLESLPAVMGTNISGQQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
Q++IGN VP VY+ ++ +G+S E + + + N+ ++SG+F P+L ++ A
Sbjct: 62 QIIIGNDVPKVYKAIIANSGLSDEKAGE-QQAGKKKNVLSAIFDVISGVFTPILPAIAGA 120
Query: 124 GMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GMIKG++AI G +++T + +L+A GDG F FLP++LA++AA++F N + A AIG
Sbjct: 121 GMIKGIIAIAVTFGWMSETSQVHTILSAIGDGAFYFLPILLAVSAARKFGSNPYVAAAIG 180
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
A+++P++ A + K + +F GLP+ A++Y STV+P++ A+W
Sbjct: 181 AAILHPDLTALLGSGKSI---------------SFVGLPVT--AATYSSTVIPILLAIWI 223
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+ +EK K+ P +K+ VP TLL+ VP+ + +GP+ + A + + G+++ +
Sbjct: 224 ASYVEKWIDKVTPTSLKMIFVPTLTLLVVVPVTLITVGPLGAIAGNYLSIGVNGLFENAG 283
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMMR 361
++ I+L + ++VM G+H+ +P+ + Q G ++ A QAGA + +R
Sbjct: 284 LITMILLAGTFSLIVMTGMHYAFIPVMFNNITQNGYDYLIPAMFLANMGQAGASFAVFLR 343
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
++ +K + LS+ I+AL G+TEPA+YG+ + ++ PF+ + A+ GA+ V +
Sbjct: 344 SRNKKFKSLSLTTSITALMGITEPAMYGVNMRLKKPFVSALLGAAVGGAFYGITGVAAYI 403
Query: 422 MGG-MGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+GG +GL I +FI T I +I IV F ++ ++ PS+ +AAE
Sbjct: 404 IGGNVGLPGITTFI----GPTFIQAMIGIVIAFFAATAFAFVLGFEDI---PSD-EAAEQ 455
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+ E AG E ++ SPL GEV AL + DA F+ MGKGVAIEP G+VV+P G
Sbjct: 456 GAAPSE---AGAGE-IIQSPLKGEVKALSEVDDATFSGEVMGKGVAIEPEEGKVVSPVSG 511
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I +F T HA+G+ +D+GAE++IH+G+DTV L+G+ FT HV +G VK G L+SFD+D
Sbjct: 512 TITTVFQTKHALGITSDNGAEIIIHIGIDTVKLNGEHFTVHVNKGDAVKPGDELVSFDMD 571
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGE 631
IK+AGY + TP+I+TNT Y+ I+ L E
Sbjct: 572 AIKDAGYQLITPVIITNTDRYQSIKPLKSDE 602
>gi|148378873|ref|YP_001253414.1| PTS system, beta-glucoside-specific IIabc component [Clostridium
botulinum A str. ATCC 3502]
gi|153933145|ref|YP_001383256.1| PTS system, beta-glucoside-specific, IIABC component [Clostridium
botulinum A str. ATCC 19397]
gi|153936097|ref|YP_001386805.1| PTS system, beta-glucoside-specific, IIABC component [Clostridium
botulinum A str. Hall]
gi|148288357|emb|CAL82434.1| PTS system, beta-glucoside-specific IIabc component [Clostridium
botulinum A str. ATCC 3502]
gi|152929189|gb|ABS34689.1| PTS system, beta-glucoside-specific, IIABC component [Clostridium
botulinum A str. ATCC 19397]
gi|152932011|gb|ABS37510.1| PTS system, beta-glucoside-specific, IIABC component [Clostridium
botulinum A str. Hall]
Length = 629
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 243/648 (37%), Positives = 368/648 (56%), Gaps = 28/648 (4%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y LA+ I+ HVGG++NI L HC TRLRF+LKDE KADT+ L +GV+ VV +GGQY
Sbjct: 2 NYKNLAETILKHVGGEENIESLTHCATRLRFNLKDEKKADTNTLKATEGVMGVVSSGGQY 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QV+IG+ V +VY+ V++ + + +V ++++ + L + I +SG+F P++ ++AA
Sbjct: 62 QVIIGSDVGNVYKEVMEFTSLENK-NVPSENEKDDRKLLSKVIDTISGIFTPIIPAITAA 120
Query: 124 GMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K V+AI+ V D +Y V+N D F FLP++LA +AAK+FK N + A+ IG
Sbjct: 121 GMMKAVLAILMTFNVISKDSQSYQVINFMADSAFYFLPILLANSAAKKFKCNPYMAMLIG 180
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L+ P + TA K G I + FGLPI +SY S+VLP+I AVW
Sbjct: 181 GILLNPTFVSMVTAAKE-----KGGAI------SIFGLPISL--NSYSSSVLPIILAVWF 227
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+ +E KI P +K F P T LIT + +VIGP+ SD +G + +
Sbjct: 228 MSYVEPVADKISPKAIKFFSKPLITALITGIVTLVVIGPIGYIVSDKIGLGIKTLELYCS 287
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAIL-ELQKG-PGVILVASIAICFAQAGALLNIMM 360
L +LG +LVM G H+GL+P+ I + G VI +A AQ GA L +
Sbjct: 288 WLVPTILGGLTPLLVMTGTHYGLIPIGINNRMTMGYDTVIYPGMLASNVAQGGAALAVAF 347
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
++K +++QL+ A I+A+ G+TEPA+YGI L R + I GA+ G +L F V
Sbjct: 348 KSKNAEIKQLASSAGITAVCGITEPALYGINLRFRKALYSSMIGGAVGGLFLGIFRVSNY 407
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
G G +P +I + T+I+F+ A++ + + I L+ EK +E
Sbjct: 408 SGGSPGFLTLPGYIGGN---TMINFIYAVIGAVISVVVSFVVCLI--LYKDQVEKSDSEV 462
Query: 481 LDS-----EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVV 535
+ E + VSAG V SPL GE V+L++ D VFA MGKG+AI P+ G+VV
Sbjct: 463 ENKIENKIENKSVSAG-NMITVKSPLKGEAVSLKNVNDPVFADEIMGKGIAIIPTEGKVV 521
Query: 536 APADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLL 595
+P +G + ++F T HA+ L ++G E++IH+G+DTV L GK F HV +G KV G LL+
Sbjct: 522 SPVEGTVEMVFDTKHAVALKDENGVEMIIHIGLDTVKLGGKYFNTHVEKGDKVSVGTLLV 581
Query: 596 SFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
F+++ IKE GY TP ++TN + +I + + G ++++ K
Sbjct: 582 DFNMEKIKEEGYDCITPFVITNGNEFGEILSIDDKIVTQGEDIIKIVK 629
>gi|28379609|ref|NP_786501.1| beta-glucosides PTS, EIIBCA [Lactobacillus plantarum WCFS1]
gi|28272449|emb|CAD65373.1| beta-glucosides PTS, EIIBCA [Lactobacillus plantarum WCFS1]
Length = 649
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 233/649 (35%), Positives = 361/649 (55%), Gaps = 27/649 (4%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY LAK+I+ ++G K N+ + HCVTR+RF L DES+A+ + + DGV+ VVK GGQY
Sbjct: 2 DYKPLAKEILKNIGTKSNVRSITHCVTRVRFVLNDESQANDEVIRDLDGVLDVVKQGGQY 61
Query: 64 QVVIGNHVPDVYETVLKVAGIS------GEGSVDADDDAVEGNLFDRFIALVSGLFQPML 117
QVVIG V VY+ ++ VA S E + D+ E ++ + L+S +F P+L
Sbjct: 62 QVVIGPSVGSVYDAIIDVANFSDNVINSSEIAAPTSDETEEKGFLNKALGLISSIFIPVL 121
Query: 118 GTLSAAGMIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQF 176
G LS AGMIK ++++ G+ G Y++L+A GD LF F P+++ +AA++F + +
Sbjct: 122 GLLSGAGMIKAILSLCTVTGLLTAKSGTYIILSALGDTLFYFFPIVVGWSAARKFGLKEI 181
Query: 177 TALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPV 236
+ +G LVYP +A + + + T+F GT TF G+P+ SY STV+P+
Sbjct: 182 YGVTLGAFLVYPTLATA-ASSTAVTTIFKGTIFALKYKMTFLGIPVAL--QSYSSTVIPI 238
Query: 237 IAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTG 296
I VW + + K K+IPDV+K+ VPFFTLLI ++ +VIGP+ +++
Sbjct: 239 IIIVWFASYVYKYCDKVIPDVLKMVFVPFFTLLIAGVVSLIVIGPIAMILQNILSDTVLW 298
Query: 297 IYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIAICFAQAGAL 355
+ + + G +LG W +LVMFGLHW ++P AI G VI A A G+
Sbjct: 299 LVGLNKGIAGFLLGFFWSILVMFGLHWAVIPFFAIDVAHYGYDVINPLIFAGGLAVLGSA 358
Query: 356 LNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFF 415
+ + +R ++E+V+ +S+ A ISA FG+ EPA+YG+ +P + + + ++ + GA F
Sbjct: 359 IGVAIRARDERVKSMSVAAAISAFFGINEPALYGVLIPRKKVLLTSFLAAGIGGAIAGFS 418
Query: 416 DVKMQVMGGMGLFAIPSFIEASN-SMTLIHFLIAIVANFVLGFGLTQLIKIP-NLFGGPS 473
K+ G G+ +P FI I I+ + FV + + P+
Sbjct: 419 GSKLYSFGASGILGLPCFINPKGIDAGFIGLCISGIVAFVFALIAALIAGAKKDAKSKPA 478
Query: 474 EKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGE 533
E+ AE D V +P+AGE L D VF+ +G G+A++PS G+
Sbjct: 479 ERHLAEHSD--------------VYAPVAGESFDLTTVHDDVFSKLVLGDGIAVKPSDGK 524
Query: 534 VVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQL 593
V AP G++R+ +PT HA+GLA+DDG E+LIH+G+DTV L+GK F HV QG +VKKG L
Sbjct: 525 VYAPVTGIVRVAYPTGHAVGLASDDGEEVLIHIGIDTVNLEGKHFKMHVAQGMRVKKGDL 584
Query: 594 LLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
L+ FD I AGY T ++VT + K + G + ++L+++
Sbjct: 585 LVDFDEAAISAAGYDTTVMMVVTKSERLKSVMPTQFGPVTKDTKVLDVE 633
>gi|150017683|ref|YP_001309937.1| PTS system, beta-glucoside-specific IIABC subunit [Clostridium
beijerinckii NCIMB 8052]
gi|149904148|gb|ABR34981.1| PTS system, beta-glucoside-specific IIABC subunit [Clostridium
beijerinckii NCIMB 8052]
Length = 630
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 236/650 (36%), Positives = 372/650 (57%), Gaps = 35/650 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY+ +AK+I+ +GG +N++ ++HC+TRLRF+LKDES + D + K GV+ V+K GGQY
Sbjct: 2 DYSIVAKEIIEKIGGVNNVSSVIHCMTRLRFTLKDESIVNDDQVKKIKGVMGVMKKGGQY 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
Q++IGN V Y+ VLK+ S + + + + + N+ + + +VSG + + A
Sbjct: 62 QIIIGNEVSKCYKEVLKLGNFS-DSANNTESSNEKQNIITKVLDVVSGSMSATMPAIIGA 120
Query: 124 GMIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K +V ++ +G+ + T Y +L+A GD F FLP+IL I+ +K+F +N +T A+
Sbjct: 121 GMVKVLVVLLTTIGLLSNTSQTYTILSALGDATFYFLPMILVISTSKKFNINPYTFAAVI 180
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
+VYP+ L AG+P+ +F GLP+ +SY +V+PVI W
Sbjct: 181 GVMVYPDFVK---------LLGAGSPV------SFIGLPVT--TASYGYSVIPVILMAWV 223
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
IE+ KI P V K F+ P LLI +P+A +VIGP+ + + I D +
Sbjct: 224 MKYIEEIVDKITPAVTKNFLKPMLILLIAMPIAIIVIGPLGFLVGKGLSTVMYTIQDKAN 283
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPG---VILVASIAICFAQAGALLNIM 359
+ ++ A ++VM G+HW VP+A+ L PG ++LVA + AQ + L +
Sbjct: 284 WIALPLMAAFMPLIVMTGMHWAFVPMALTALAN-PGYETLLLVAMLPSNLAQGASALAVS 342
Query: 360 MRTKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVK 418
+++K + ++Q++ + ISAL GVTEPA+YG+T+ + P I + I+ + G Y +K
Sbjct: 343 LKSKNKDLKQVASASSISALLAGVTEPAMYGVTIKYKKPLIASMIASGIAGLYAGIVALK 402
Query: 419 MQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
+ V L +I FI+ + S I+ LI V F LT +I F P+ +++
Sbjct: 403 VYVFATPALISIVQFIDPNGSSNFINALITAAIAIVGSFALTWIIG----FDDPANEESE 458
Query: 479 ESLDSEKERVSAGI-------TEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSV 531
ESL K V +E ++ +P+ G+ V+L D F+ MGKG AI PS
Sbjct: 459 ESLIENKMEVKEAALDKAETKSEAIILTPIEGKSVSLSQVNDITFSEEIMGKGAAIIPSK 518
Query: 532 GEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKG 591
G V+P +GVI LF T HAIG+ +DG E+LIH+G+DTV L GK FTAHV G KVK G
Sbjct: 519 GIAVSPVNGVISALFETKHAIGITAEDGTEILIHIGLDTVKLGGKHFTAHVKSGDKVKIG 578
Query: 592 QLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
LL+ FDI+ IK GY V TP++VTN+++YK + L +++ ++L+++
Sbjct: 579 DLLVEFDIEAIKREGYEVITPVLVTNSSDYKDVLSLIDKDVKEKDELIKV 628
>gi|68053767|ref|ZP_00537932.1| Sugar-specific permease, EIIA 1 domain:PTS system,
beta-glucoside-specific IIABC component [Exiguobacterium
sibiricum 255-15]
gi|68009545|gb|EAM88755.1| Sugar-specific permease, EIIA 1 domain:PTS system,
beta-glucoside-specific IIABC component [Exiguobacterium
sibiricum 255-15]
Length = 632
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 235/653 (35%), Positives = 370/653 (56%), Gaps = 37/653 (5%)
Query: 3 KDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQ 62
+DY +LA I+ VGG+DNI + C TRLR LK D + GV+TVV++GGQ
Sbjct: 5 RDYQQLAHSILEAVGGEDNIISVARCATRLRLVLKRSDAKAKDQVAALPGVITVVESGGQ 64
Query: 63 YQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
+Q+VIG HV +VYE + + +G+ D + +G + +R IA +S +F P + L+A
Sbjct: 65 FQIVIGQHVGEVYEAFRPLVSLE-DGNSDQGTETPKGTILNRIIATMSAVFAPFVYILAA 123
Query: 123 AGMIKGVVAIMAAL--GVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
AG+++G + +++ + A T G Y V + F FLP+ +AITAA FK+NQF A+A
Sbjct: 124 AGILQGALILISLVFKDFAAT-GTYEVFSFISWAPFTFLPIFIAITAANHFKVNQFIAVA 182
Query: 181 IGFALVYPN---IAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVI 237
ALV P IA T+ + + +F G I ++Y S+VLP +
Sbjct: 183 CSAALVSPTWAEIAGRITSGESI---------------SFIG--IALSGTTYTSSVLPPL 225
Query: 238 AAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGI 297
VW + +E+ + I DV+K VPFF+++I VPL LVIGP+ + ++ + + +
Sbjct: 226 FLVWLLSYLERFLNRTINDVIKPLFVPFFSMVIMVPLTILVIGPITTLGAEGIANGYNYL 285
Query: 298 YDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALL 356
+ +P L G+++G WQ++V+FG+HWG+ P+ + Q G AQ GA++
Sbjct: 286 AENAPALAGLIIGGFWQIIVIFGVHWGVTPMVLSNFEQYGRDSFQAYQTIAVIAQVGAVI 345
Query: 357 NIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFD 416
++++T+ ++ +++ + A ++ +FG+TEPAIYG+TL + PFI CISGA+ +FF
Sbjct: 346 GVILKTRNKETKKVGVSAGLTGIFGITEPAIYGVTLRFKKPFIYGCISGAVGAVVASFFK 405
Query: 417 VKMQVMGGM-GLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEK 475
G+ G + + I + +++ LI +L L QL+ G EK
Sbjct: 406 PYYFAYAGLPGPLTLVNGISSDYPSSIVGLLIGTAIALILPIVLIQLL------GFGEEK 459
Query: 476 DAAESLDSE----KERVSAGIT-EQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPS 530
+ + VSA +T E+ + +PLAG+VV L D PD VFASGAMG+G+AI P+
Sbjct: 460 VVPVTTTPTTPVPAQEVSATLTNEETIQAPLAGQVVPLSDVPDEVFASGAMGQGLAIRPT 519
Query: 531 VGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKK 590
VVAP G + ++ PT HAIGL + G E+LIHVG++TV LDG FT HV G+ V+
Sbjct: 520 GNTVVAPFTGTVVMIAPTKHAIGLRSTSGVEVLIHVGLETVGLDGTPFTLHVEDGTHVEA 579
Query: 591 GQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
GQ LL+FD I++ G TP+IVTN ++Y ++ V+ + ++ +L + K
Sbjct: 580 GQTLLTFDASAIEQHGLQTITPVIVTNASSYAEVIVVQQETVETNTAILTIVK 632
>gi|154688035|ref|YP_001423196.1| BglP [Bacillus amyloliquefaciens FZB42]
gi|154353886|gb|ABS75965.1| BglP [Bacillus amyloliquefaciens FZB42]
Length = 611
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 231/641 (36%), Positives = 372/641 (58%), Gaps = 35/641 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +++K+I+ VGG++N+ ++HC+TRLRF+L D +KAD L + +GV+ +GGQ+
Sbjct: 2 DYHKISKEILQLVGGEENVQSVIHCMTRLRFNLYDNAKADRSGLEQTEGVMGTNISGGQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
Q+++GN VP VY+ +++ +G+S E + + N+ ++SG+F P+L ++ A
Sbjct: 62 QIIVGNDVPKVYQALMESSGLSHESANKTSKQ--KKNVLSAVFDVISGVFTPILPAIAGA 119
Query: 124 GMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GMIKG+VA+ G + + + +L A GDG F FLPL+LA++AA++F+ N + A A+
Sbjct: 120 GMIKGLVALAVTFGWLLEKSQTHSILTAVGDGAFYFLPLLLAVSAARKFRCNPYVAAAVA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
A+++P++ A A K + +F GLP+ A++Y STV+P++ A+W
Sbjct: 180 GAILHPDLTALLGAGKSI---------------SFIGLPVT--AATYSSTVIPILLAIWL 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+ +EKG +I P +K+ VP TL+I VP+ + +GP+ + + + +++ +
Sbjct: 223 MSYVEKGIDRITPSSLKLIAVPMLTLVIVVPVTLITVGPLGAILGNYLSVGVNDLFNHAG 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMMR 361
+ I+L + +++M G+H+ LVP+ I + Q G IL A QAGA + ++
Sbjct: 283 IAAMILLAGTFSLIIMTGMHYALVPIMINNIAQNGHDYILPAMFLANMGQAGASFAVFLK 342
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
+K + + L+ I+AL G+TEPA+YG+ + ++ PF I GA GA+ V +
Sbjct: 343 SKNKTFKSLAFTTGITALMGITEPAMYGVNMRLKKPFAAALIGGAAGGAFYGVTGVASYI 402
Query: 422 MGG-MGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+GG GL +IP FI + FL A++ FV + SE+D A
Sbjct: 403 VGGNAGLPSIPVFIGPT-------FLYALIGLFVSFAAGIAAALLIGFEDVQSERDKA-- 453
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
SE V+AG +++ SP+ GEV AL + D+VF+ G MGKG AI P G V+P +G
Sbjct: 454 --SEAPGVTAG--GEIIHSPIKGEVKALSEVNDSVFSGGMMGKGFAILPEEGAAVSPVEG 509
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
+ +F T HAIG+ + GAE+LIH+G+DTV LDG+ F HV +G V G LL++FDID
Sbjct: 510 RVTAVFKTKHAIGITSTRGAEVLIHIGLDTVRLDGRHFEMHVKEGDTVAPGDLLITFDID 569
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
IK AG+ V TP+I+TNT Y +V G ++ LL L
Sbjct: 570 EIKAAGFDVITPVIITNTDQYSFTDVKKSGMVKPNEALLAL 610
>gi|153938120|ref|YP_001390230.1| PTS system, beta-glucoside-specific, IIABC component [Clostridium
botulinum F str. Langeland]
gi|152934016|gb|ABS39514.1| PTS system, beta-glucoside-specific, IIABC component [Clostridium
botulinum F str. Langeland]
Length = 625
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 240/644 (37%), Positives = 364/644 (56%), Gaps = 24/644 (3%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY LA+ I+ +VGG++NI L HC TRLRF+LKDE KADT+ L +GV+ VV +GGQY
Sbjct: 2 DYKNLAETILKYVGGEENIESLTHCATRLRFNLKDEKKADTNTLKATEGVMGVVSSGGQY 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QV+IG+ V +VY+ V++ + + + ++ + L + I +SG+F P++ ++AA
Sbjct: 62 QVIIGSDVGNVYKEVMEFTSLENNNA-PSKNEKDDRKLLSKVIDTISGIFTPIIPAITAA 120
Query: 124 GMIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K V+AI+ V +K +Y V+N D F FLP++LA +AAK+FK N + A+ IG
Sbjct: 121 GMMKAVLAILMTFNVISKNSQSYQVINFMADSAFYFLPILLANSAAKKFKCNPYMAMLIG 180
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L+ P + TA K E + FGLPI +SY S+VLP+I AVW
Sbjct: 181 GILLNPTFVSMVTAAK-----------EKGGVISIFGLPISL--NSYSSSVLPIILAVWF 227
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+ +E KI P +K F P T LIT + +VIGP+ SD +G + +
Sbjct: 228 MSYVEPVADKISPKAIKFFSKPLITALITGIVTLVVIGPIGYIVSDKIGLGIKTLELYCS 287
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAIL-ELQKG-PGVILVASIAICFAQAGALLNIMM 360
L +LG + VM G H+GL+P+ I + G VI +A AQ GA L +
Sbjct: 288 WLVPTILGGLTPLFVMTGTHYGLIPIGINNRMTMGYDTVIYPGMLASNVAQGGAALAVAF 347
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
++K+ +++QL+ A I+A+ G+TEPA+YGI L R + I GA+ G +L F V
Sbjct: 348 KSKDAEIKQLASSAGITAVCGITEPALYGINLRFRKALYSSMIGGAVGGLFLGIFRVCNY 407
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEK-DAAE 479
G G +PS+I + T+I+F+ A++ + + I L+ EK D
Sbjct: 408 SGGSPGFLTLPSYIGGN---TMINFIYAVIGAIISVVVSFVVCLI--LYKDQVEKSDNKV 462
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
E ++VS G V SPL GE V+L++ D VFA MGKG+AI P+ G+VV+P +
Sbjct: 463 ENKIENKKVSTG-NMITVKSPLTGEAVSLKNVNDPVFADEIMGKGIAIIPTEGKVVSPVE 521
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + ++F T HA+ L ++G E++IH+G+DTV L GK F HV +G KV G LL+ F++
Sbjct: 522 GTVEMVFDTKHAVALKDENGVEMIIHIGLDTVKLGGKYFNTHVKKGDKVSVGTLLVDFNM 581
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
+ IKE GY TP ++TN + +I + + G ++++ K
Sbjct: 582 EKIKEEGYDCITPFVITNGNEFGEILSIDDKTVIQGEDIIKIVK 625
>gi|153940854|ref|YP_001392130.1| PTS system, beta-glucoside-specific family, IIABC component
[Clostridium botulinum F str. Langeland]
gi|152936750|gb|ABS42248.1| PTS system, beta-glucoside-specific family, IIABC component
[Clostridium botulinum F str. Langeland]
Length = 623
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 224/649 (34%), Positives = 365/649 (56%), Gaps = 37/649 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY ++ ++ VGG N+ KL HC TRLRF L D+SK L GV++VV GGQ+
Sbjct: 2 DYKKVGLQVLELVGGTKNVNKLTHCATRLRFELNDKSKVQMKKLENLPGVISVVDKGGQF 61
Query: 64 QVVIGNHVPDVYETVL-KVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
QV+IGN V Y ++ + + + + + + + N+ RFI+++S F PM+ ++
Sbjct: 62 QVIIGNDVQTAYRAIINETSSLINSPNKQHNKNVEKENIVSRFISVISTTFTPMIPAITG 121
Query: 123 AGMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAI 181
AGMIK V++I++ G+ D Y +L+ D F F+P++LA AA +F+ N A+ I
Sbjct: 122 AGMIKAVLSILSLTGLLSADSQTYYLLDTIADAAFFFMPILLAYGAAIKFECNPILAITI 181
Query: 182 GFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVW 241
AL++PN+A+ T+ K +Y F G+P+ ++Y +VLP+I VW
Sbjct: 182 AGALLHPNLASLMTSGKAVY---------------FIGIPVRL--TNYAGSVLPIIITVW 224
Query: 242 AGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFS 301
A + IEK +KI P ++K F P LL+T PLA +VIGP ++ +DLV I +
Sbjct: 225 AMSYIEKFAEKISPSIIKFFTKPLIILLLTAPLALIVIGPFGTYLNDLVATGAEFINGKA 284
Query: 302 PVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-------GPGVILVASIAICFAQAGA 354
L +++GA LV+ G W + P+A ++L GPG++ A AQ A
Sbjct: 285 SWLIPLLMGAFQPFLVVTGTAWAMTPIATMQLTNNGSEMINGPGML-----ASNIAQGAA 339
Query: 355 LLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAF 414
L + +++K + ++QL+ A +AL G+TEP++YG+TL ++ P I I G G Y
Sbjct: 340 TLCVAVKSKNKNLKQLAASAGTTALLGITEPSLYGVTLKLKKPLIAAMIGGGCAGIYAGL 399
Query: 415 FDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSE 474
+ GL A+P+FI N M +IH LI + FV+ F LT ++ F P +
Sbjct: 400 SGLVRYAFVSPGLAALPAFI-GKNPMNIIHALITCLIAFVVTFILTWILG----FEDPID 454
Query: 475 KDAAESLDSEKERVSAGITEQV-VTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGE 533
+++ ++ + K+ + T + + SPL+GE++ L D VF+ +GKG+AI P+ G
Sbjct: 455 EESIKTSIANKKETTISDTNIIGIASPLSGELIPLSQVNDDVFSGELLGKGMAILPNNGN 514
Query: 534 VVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQL 593
VV+P +G++ + + HA+ L D+G E+LIH+G+DTV L+GK F + V G +VK G
Sbjct: 515 VVSPIEGIVSTVLESKHAVALQGDNGVEILIHIGLDTVNLEGKYFKSFVKSGDRVKIGDK 574
Query: 594 LLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
L+ F+I+ IK+ GY TP+I+ N+ Y+ + + E+ GN ++++K
Sbjct: 575 LIEFNINEIKKLGYDTVTPVIICNSDKYETVVGEKENEVTFGNNIIKIK 623
>gi|116495647|ref|YP_807381.1| Trehalose PTS trehalose component IIBC [Lactobacillus casei ATCC
334]
gi|116105797|gb|ABJ70939.1| Trehalose PTS trehalose component IIBC [Lactobacillus casei ATCC
334]
Length = 612
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 240/630 (38%), Positives = 366/630 (58%), Gaps = 41/630 (6%)
Query: 8 LAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVI 67
LA+ ++ +GGK NI ++ HC TR RF+LKD +K D + DGV+TVV+A GQ+QVVI
Sbjct: 6 LAQQLLNLIGGKQNINQVWHCATRPRFTLKDRAKVPKDKIEALDGVITVVEASGQFQVVI 65
Query: 68 GNHVPDVYETVLKVAGISGEGSVDADDDAVEGNL-----FDRFIALVSGLFQPMLGTLSA 122
GN+V DVY V+K+ EG + A +G + F+ + +SG+F P LG ++
Sbjct: 66 GNNVGDVYHEVVKLEPSLSEGETSGET-AAQGKMTFKSAFNSLLTFISGVFTPFLGAMAG 124
Query: 123 AGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAI 181
AG++KG++++ +G + GAY + AA DG+F FLP+ LA TAAK+ K+NQF ++AI
Sbjct: 125 AGILKGLLSLAVVMGWLTAKSGAYQIWWAAADGIFYFLPIALAFTAAKQLKVNQFVSMAI 184
Query: 182 GFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVW 241
A+V P I A T I+ FFG+P++ ++Y +TVLP++ V
Sbjct: 185 AAAMVSPGIVALGAK---------ATTID------FFGIPVV--PANYTATVLPILLVVV 227
Query: 242 AGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFS 301
+E F K+ + V+ + P L++ VPL +V+GP+ + S + +
Sbjct: 228 VQKFLEPVFNKLWHESVRNIMAPLCLLVVIVPLTLIVVGPISATVSSWLATAIVSLNKSV 287
Query: 302 PVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMM 360
P+L G+VLG WQV+V+FG+HW LVP+ + + Q G +++ + +QAGA L + +
Sbjct: 288 PILAGLVLGGFWQVIVIFGVHWALVPVMMNNIAQNGTDLMMPILLPAVLSQAGAALAVFL 347
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
RT++ K++ L+ + I+ALFG+TEP IYGITL ++ PF + C++GA+ G +A
Sbjct: 348 RTRDAKMKSLAGSSTITALFGITEPTIYGITLKLKKPFYLACVAGAVGGMIVAISGAGAN 407
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ + ++P+FI ++++ ++A F LG LT FGG + A++
Sbjct: 408 AAALVSVLSLPTFIGKGFGLSVVGDVVA----FALGTVLTYF------FGGINAGAKAKT 457
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
S +V+ +P+ G +V L D VFAS MGKGVAI P G V AP G
Sbjct: 458 APSANSEPG-----EVLAAPVKGVLVPLTGLADEVFASETMGKGVAIVPENGMVKAPVAG 512
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
VIRLL+PT HAIG+ +D G+E+LIH+G+DTV L GK F V QG V+ G L+ FD +
Sbjct: 513 VIRLLYPTGHAIGIQSDKGSEILIHIGIDTVNLKGKHFQPLVAQGQHVEIGTPLVQFDHE 572
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKG 630
I++ GY T +IVTN+ Y QI L +G
Sbjct: 573 AIEKEGYESTVMMIVTNSDQY-QIATLGQG 601
>gi|154505065|ref|ZP_02041803.1| hypothetical protein RUMGNA_02575 [Ruminococcus gnavus ATCC 29149]
gi|153794544|gb|EDN76964.1| hypothetical protein RUMGNA_02575 [Ruminococcus gnavus ATCC 29149]
Length = 657
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 237/649 (36%), Positives = 361/649 (55%), Gaps = 36/649 (5%)
Query: 3 KDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQ 62
+DY +LA DI+ VGGK+NI C TRLR LK+E + + + GV+TVV+ GQ
Sbjct: 36 RDYRKLAHDIICEVGGKENIVNATRCATRLRLVLKEEPEQAKEKVAAMAGVITVVENSGQ 95
Query: 63 YQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG---NLFDRFIALVSGLFQPMLGT 119
+QVVIG HV +VY+ V + E +D ++ VE ++ ++ IA +S +F P +
Sbjct: 96 FQVVIGTHVGEVYDAVAE------ELHLDTENLQVEQPKQSVMNKVIATMSAVFAPFVYI 149
Query: 120 LSAAGMIKGVVAI--MAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFT 177
L+AAG+++G + + MA A T G Y VL+ F FLP+ +AITA+K FK N F
Sbjct: 150 LAAAGLLQGALILVNMAVPSFAGT-GTYAVLSFMSWTPFTFLPIFIAITASKHFKCNTFI 208
Query: 178 ALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVI 237
A+ ALV P+ +AG L I ++Y STVLP +
Sbjct: 209 AVLCCCALVNPD--------------WAGMAARIADGEVIRFLGIKLSETTYTSTVLPPL 254
Query: 238 AAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGI 297
VW + +E+ +K +P+ K + P LI VP LVIGPV S ++ + + +
Sbjct: 255 LLVWVLSYLERFLEKKLPEAAKALLTPLICFLIMVPATILVIGPVSSITANGIANGYNFL 314
Query: 298 YDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALL 356
+ +P L G ++G W+V+V+FG+HWG+ P+ + +G AQ A
Sbjct: 315 ANTAPALAGAIIGGLWEVVVIFGVHWGITPVVLANFDMQGFDTFQAFQTIAVVAQVAAAF 374
Query: 357 NIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFD 416
+ +R+K +++ +S+ A I+ +FG+TEP IYG+TL ++ PFI CI GA+ ++FF
Sbjct: 375 GVFIRSKNREMKSVSLSAGITGIFGITEPTIYGVTLRLKKPFICGCIGGAVGAVVMSFFH 434
Query: 417 VKMQVMGGM-GLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEK 475
G+ L + + I M+ + + VL L Q++ F P EK
Sbjct: 435 SAYYAYAGLPSLLTVVNSISKDAPMSFVGEAVGCAVAIVLTIVLIQVVG----FADPKEK 490
Query: 476 DAAESLDSEKERVSAGIT-EQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEV 534
E D+EK + I E++V SP+ GEV+ L + D VF+ MGKG AI P G++
Sbjct: 491 ---EESDTEKGSTNEEICGEEIVDSPMRGEVIPLSEVHDEVFSGEMMGKGCAIVPEEGKI 547
Query: 535 VAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLL 594
AP DG I L ++HA+G+ + G E+LIHVGMDTV L G+GFTA+V G +VKKGQLL
Sbjct: 548 YAPFDGKIVGLLESHHAVGIESTSGIEILIHVGMDTVKLQGRGFTAYVQDGEQVKKGQLL 607
Query: 595 LSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
L F+ + I++AGY VTTP+IVTN+ + +IE +A +++ N LL++++
Sbjct: 608 LEFEKEEIEKAGYEVTTPVIVTNSYEFSEIETVAFKQVERQNALLKVQR 656
>gi|123442367|ref|YP_001006346.1| PTS system beta-glucoside-specific IIabc component [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122089328|emb|CAL12176.1| PTS system beta-glucoside-specific IIabc component [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 633
Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats.
Identities = 234/648 (36%), Positives = 364/648 (56%), Gaps = 38/648 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y LA +I+ HVGGK+NI L HC+TRLRFSLKD K + L K +GV+ V++ GQYQ
Sbjct: 4 YNMLAGEIIEHVGGKENIVSLTHCITRLRFSLKDSKKFNKSVLDKLEGVILAVESNGQYQ 63
Query: 65 VVIGNHVPDVYETVLK-------VAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPML 117
VVIGN V VY ++ V+ I GE S D +GN+ R +S + P++
Sbjct: 64 VVIGNDVTKVYNVIVDEFDIKGDVSSIDGESSPDK-----KGNIVGRIFNKMSSILVPIV 118
Query: 118 GTLSAAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQF 176
L+ AGM+K ++ I++ + T Y +L AA + +F FLPL+LA + AK F + F
Sbjct: 119 PALAGAGMLKALLVILSTYHFIDPTGSTYKILAAASNSVFYFLPLLLAFSCAKSFNAHPF 178
Query: 177 TALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPV 236
++AI AL+ P F G F G+P++ Y ST++P
Sbjct: 179 VSVAIVGALLEPT--------------FTGLMKNQGDIVEFMGIPVVL--MKYSSTLIPA 222
Query: 237 IAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTG 296
I A+WA + +E+ K+ I +++ VP LLI VP+ + +GP+ + D +GA
Sbjct: 223 ILAIWAYSYLERFLKRFIHQSIEMIAVPMLGLLIMVPVIVIAVGPIGVYLGDGIGAGIAY 282
Query: 297 IYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGAL 355
+ + S +L G ++G W +LVMFGLHWGLVP+ + L G I A+ FA AGA
Sbjct: 283 MNNVSGMLTGAIIGGGWTLLVMFGLHWGLVPVMLNNLALHGFDTIKPAAATATFASAGAA 342
Query: 356 LNIMMRTKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAF 414
+ ++TK++K++ ++ + ALF GVTEP +YGI++ + P I + I+G + G ++
Sbjct: 343 FGVFLKTKDKKLKSFALSTMVPALFAGVTEPIVYGISIKYKRPLIASLIAGTIAGGFVGA 402
Query: 415 FDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPS- 473
+ L +P+F+ + T +++I I FVL LT ++ S
Sbjct: 403 MGTTVMAYVFPALTTLPAFM----TNTFAYYVIGISMAFVLSTVLTYILGFDEKIDESSV 458
Query: 474 --EKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSV 531
D++ + + + +TE ++ +PL G++V L D D VFAS +GKG+AI P+
Sbjct: 459 VSRPDSSSNSQLSRNNSATVLTEVLLNAPLNGKIVPLTDVKDGVFASEIIGKGIAIYPTE 518
Query: 532 GEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKG 591
G V +P +GV+ LF T+HAIG+ +D+G E+LIHVG+DTV L+G+ F ++ +G V KG
Sbjct: 519 GLVYSPVNGVVSKLFHTHHAIGIISDEGVEILIHVGIDTVKLNGEFFKNNINEGDIVTKG 578
Query: 592 QLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
QLLL+FD++ + G+ +TTP+I+ NT +YK I V + I N L+
Sbjct: 579 QLLLTFDLNALLAKGFDITTPVIIANTDDYKDILVTERDSIDRSNTLM 626
>gi|116874135|ref|YP_850916.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116743013|emb|CAK22137.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 617
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 241/649 (37%), Positives = 374/649 (57%), Gaps = 48/649 (7%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +LAK+I+ VGGK N+ ++ HC+TRLRF LKD+SK + L D V+ AG Q+
Sbjct: 2 DYNQLAKEIIQAVGGKGNVNEVYHCITRLRFQLKDQSKVNEQQLKDLDKVMGTNIAGNQF 61
Query: 64 QVVIGNHVPDVYETVLK--VAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLS 121
QV+IGN VP V++ +++ A + E + F +SG+F P+L ++
Sbjct: 62 QVIIGNDVPKVFDALVEENPAWKNKETANKTTRQKGVKGFFSNIFDALSGVFAPILPAIA 121
Query: 122 AAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
AG+IKG +A+ +L +A Y +L A GDG+F FLP+++A++AA+ FK N F AL
Sbjct: 122 GAGLIKGFMALFVSLDWLATNTETYRILMAIGDGVFYFLPILVAVSAARYFKANMFVALG 181
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
IG AL+YP++ A +A K F GLP+ +Y +V+P++ A+
Sbjct: 182 IGAALLYPDLTALLSAGK---------------VPHFIGLPVT--PVTYAYSVIPILLAI 224
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
W + +EK +IIP +K+ VP T+ I VPL +VIGP+ ++ D V + +
Sbjct: 225 WIMSYVEKWVDRIIPTSLKLLFVPLITMFIVVPLTLVVIGPLGTFVGDGVSGGINWLLNN 284
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIM 359
V+ GI++G A ++VM G+H+ +VP I L K G L + +QAGA +
Sbjct: 285 GGVIGGILIGGAMAIIVMTGMHYAIVPFVISNLAKYGYDKFLPLTYISNMSQAGATFGVF 344
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
R K++K++ L+ ++AL GVTEPA+YGI + + PF+ + I GA G + F VK
Sbjct: 345 FRAKDKKLKSLAFSTGLTALMGVTEPAMYGINVVYKRPFMASLIGGAAGGGFAMMFGVKA 404
Query: 420 QVM-GGMGLFAIP-----SFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPS 473
V+ G G+ +P +F+ A +M L F++A++ +++ G QL++ +
Sbjct: 405 YVLTGNGGIPGLPGLVGDTFVYALIAMALA-FIVALIFSYIFGID-EQLVEATPVV---- 458
Query: 474 EKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGE 533
E+V+AG +++ +P+AGE+V + + D FA MGK +AI+P+ G+
Sbjct: 459 ------------EKVAAGT--EILQAPVAGELVKMSEVNDTTFADEIMGKSIAIKPNEGK 504
Query: 534 VVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQL 593
+ APA+G I LF T HAI + TD+GAE+L+HVG+DTV LDG FTAHV G V++G L
Sbjct: 505 LYAPANGTIISLFKTKHAIAMQTDNGAEILLHVGIDTVKLDGNYFTAHVTNGDVVEQGDL 564
Query: 594 LLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
L++FD++ I E Y TT ++VTNT Y IE G + GNQ++EL+
Sbjct: 565 LVTFDMEKIAEK-YDTTTIMVVTNTNEYSLIESKDNGAVTKGNQVMELR 612
>gi|46908961|ref|YP_015350.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 4b F2365]
gi|153168956|ref|ZP_01928695.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes FSL N1-017]
gi|46882234|gb|AAT05527.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 4b F2365]
gi|133725904|gb|EBA27602.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes FSL N1-017]
Length = 617
Score = 362 bits (928), Expect = 7e-98, Method: Composition-based stats.
Identities = 239/644 (37%), Positives = 370/644 (57%), Gaps = 38/644 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +LAK+I+ VGGK+N+ ++ HC+TRLRF LKD+SK + L D V+ AG Q+
Sbjct: 2 DYNQLAKEILQAVGGKNNVNEVYHCITRLRFQLKDQSKVNEKQLKDLDKVMGTNVAGNQF 61
Query: 64 QVVIGNHVPDVYETVL--KVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLS 121
QV+IGN VP V++ ++ A + E + F +SG+F P+L ++
Sbjct: 62 QVIIGNDVPKVFDALVTENPAWKNKETTNKTTRQKGIKGFFSNIFDALSGVFAPILPAIA 121
Query: 122 AAGMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
AG+IKG +A+ +LG TD Y +L A GDG+F FLP+++A++AA+ FK N F AL
Sbjct: 122 GAGLIKGFMALFVSLGWLATDTETYRILLAIGDGVFYFLPILVAVSAARYFKANMFVALG 181
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
IG AL+YP++ A +A TP F GLP+ +Y +V+P++ A+
Sbjct: 182 IGAALLYPDLTALLSA--------GTTP-------HFIGLPVT--PVTYAYSVIPILLAI 224
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
W + +EK +IIP +K+ VP T+ I VPL +VIGP+ ++ D V + +
Sbjct: 225 WIMSYVEKWVDRIIPTSLKLLFVPLITMFIVVPLTLVVIGPLGTFVGDGVSGGINWLLNN 284
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIM 359
V+ GI++G A ++VM G+H+ +VP I L K G L + +QAGA +
Sbjct: 285 GGVIGGILIGGAMAIIVMTGMHYAIVPFVISNLAKYGYDKFLPLTYISNMSQAGATFGVF 344
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
R K++K++ L+ ++AL GVTEPA+YGI + + PF+ + I GA G + F VK
Sbjct: 345 FRAKDKKLKSLAFSTGLTALMGVTEPAMYGINVVYKRPFMASLIGGAAGGGFAMMFGVKA 404
Query: 420 QVM-GGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
V+ G G+ +P + T ++ LIA+ F++ + + FG + A
Sbjct: 405 YVLTGNGGIPGLPGLV----GDTFVYALIAMALAFIVALIFSYI------FGIDEQMVEA 454
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
+ E+++AG +V+ +P+ GE+V + D FA MGK +AI+P+ G++ APA
Sbjct: 455 TPV---AEKIAAGT--EVLQAPVTGELVKMSQVNDTTFADEIMGKSIAIKPNEGKLYAPA 509
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
+G I LF T HAI + +D+GAE+L+HVG+DTV LDG FTAHV G V++G LL++FD
Sbjct: 510 NGTIISLFKTKHAIAMQSDNGAEILLHVGIDTVKLDGNYFTAHVATGDVVEQGDLLVTFD 569
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
++ I E Y TT +++TNT Y +E G + GNQ++EL+
Sbjct: 570 MEKIAEK-YDTTTMMVITNTNEYALVEAKDSGTVTKGNQVMELR 612
>gi|153204414|ref|ZP_01945211.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes HPB2262]
gi|133734194|gb|EBA35892.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes HPB2262]
Length = 617
Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats.
Identities = 238/644 (36%), Positives = 370/644 (57%), Gaps = 38/644 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +LAK+I+ VGGK+N+ ++ HC+TRLRF LKD+SK + L D V+ AG Q+
Sbjct: 2 DYNQLAKEILQAVGGKNNVNEVYHCITRLRFQLKDQSKVNEKQLKDLDKVMGTNVAGNQF 61
Query: 64 QVVIGNHVPDVYETVL--KVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLS 121
QV+IGN VP V++ ++ A + E + F +SG+F P+L ++
Sbjct: 62 QVIIGNDVPKVFDALVTENPAWKNKETTNKTTRQKGIKGFFSNIFDALSGVFAPILPAIA 121
Query: 122 AAGMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
AG+IKG +A+ +LG TD Y +L A GDG+F FLP+++A++AA+ FK N F AL
Sbjct: 122 GAGLIKGFMALFVSLGWLATDTETYRILLAIGDGVFYFLPILVAVSAARYFKANMFVALG 181
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
IG AL+YP++ A +A TP F GLP+ +Y +V+P++ A+
Sbjct: 182 IGAALLYPDLTALLSA--------GTTP-------HFIGLPVT--PVTYAYSVIPILLAI 224
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
W + +EK +IIP +K+ VP T+ I VPL +VIGP+ ++ D V + +
Sbjct: 225 WIMSYVEKWVDRIIPTSLKLLFVPLITMFIVVPLTLVVIGPLGTFVGDGVSGGINWLLNN 284
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIM 359
V+ GI++G A ++VM G+H+ +VP I L K G L + +QAGA +
Sbjct: 285 GGVIGGILIGGAMAIIVMTGMHYAIVPFVISNLAKYGYDKFLPLTYISNMSQAGATFGVF 344
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
R K++K++ L+ ++AL GVTEPA+YGI + + PF+ + I GA G + F VK
Sbjct: 345 FRAKDKKLKSLAFSTGLTALMGVTEPAMYGINVVYKRPFMASLIGGAAGGGFAMMFGVKA 404
Query: 420 QVM-GGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
V+ G G+ +P + T ++ LIA+ F++ + + FG + A
Sbjct: 405 YVLTGNGGIPGLPGLV----GDTFVYALIAMALAFIVALIFSYI------FGIDEQMVEA 454
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
+ E+++AG +++ +P+ GE+V + D FA MGK +AI+P+ G++ APA
Sbjct: 455 TPV---AEKIAAGT--EILQAPVTGELVKMSQVNDTTFADEIMGKSIAIKPNEGKLYAPA 509
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
+G I LF T HAI + +D+GAE+L+HVG+DTV LDG FTAHV G V++G LL++FD
Sbjct: 510 NGTIISLFKTKHAIAMQSDNGAEILLHVGIDTVKLDGNYFTAHVATGDVVEQGDLLVTFD 569
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
++ I E Y TT +++TNT Y +E G + GNQ++EL+
Sbjct: 570 MEKIAEK-YDTTTMMVITNTNEYALVEAKDSGTVTKGNQVMELR 612
>gi|47092662|ref|ZP_00230449.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 4b H7858]
gi|47018957|gb|EAL09703.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 4b H7858]
Length = 617
Score = 361 bits (926), Expect = 9e-98, Method: Composition-based stats.
Identities = 238/644 (36%), Positives = 370/644 (57%), Gaps = 38/644 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +LAK+I+ VGGK+N+ ++ HC+TRLRF LKD+SK + L D V+ AG Q+
Sbjct: 2 DYNQLAKEILQAVGGKNNVNEVYHCITRLRFQLKDQSKVNEKQLKDLDKVMGTNVAGNQF 61
Query: 64 QVVIGNHVPDVYETVL--KVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLS 121
QV+IGN VP V++ ++ A + E + F +SG+F P+L ++
Sbjct: 62 QVIIGNDVPKVFDALVTENPAWKNKETTNKTTRQKGIKGFFSNIFDALSGVFAPILPAIA 121
Query: 122 AAGMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
AG+IKG +A+ +LG TD Y +L A GDG+F FLP+++A++AA+ FK N F AL
Sbjct: 122 GAGLIKGFMALFVSLGWLATDTETYRILLAIGDGVFYFLPILVAVSAARYFKANMFVALG 181
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
IG AL+YP++ A +A TP F GLP+ +Y +V+P++ A+
Sbjct: 182 IGAALLYPDLTALLSA--------GTTP-------HFIGLPVT--PVTYAYSVIPILLAI 224
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
W + +EK +IIP +K+ VP T+ I VPL +VIGP+ ++ D V + +
Sbjct: 225 WIMSYVEKWVDRIIPTSLKLLFVPLITMFIVVPLTLVVIGPLGTFVGDGVSGGINWLLNN 284
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIM 359
V+ GI++G A ++VM G+H+ +VP I L K G L + +QAGA +
Sbjct: 285 GGVIGGILIGGAMAIIVMTGMHYAIVPFVISNLAKYGYDKFLPLTYISNMSQAGATFGVF 344
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
R K++K++ L+ ++AL GVTEPA+YGI + + PF+ + I GA G + F VK
Sbjct: 345 FRAKDKKLKSLAFSTGLTALMGVTEPAMYGINVVYKRPFMASLIGGAAGGGFAMMFGVKA 404
Query: 420 QVM-GGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
V+ G G+ +P + T ++ LIA+ F++ + + I ++
Sbjct: 405 YVLTGNGGIPGLPGLV----GDTFVYALIAMALAFIVALIFSYIFGI--------DEQIV 452
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
E+ E+++AG +V+ +P+ GE+V + D FA MGK +AI+P+ G++ APA
Sbjct: 453 EATPV-AEKIAAGT--EVLQAPVTGELVKMSQVNDTTFADEIMGKSIAIKPNEGKLYAPA 509
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
+G I LF T HAI + +D+GAE+L+HVG+DTV LDG FTAHV G V++G LL++FD
Sbjct: 510 NGTIISLFKTKHAIAMQSDNGAEILLHVGIDTVKLDGNYFTAHVATGDVVEQGDLLVTFD 569
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
++ I E Y TT +++TNT Y +E G + GNQ++EL+
Sbjct: 570 MEKIAEK-YDTTTMMVITNTNEYALVEAKDSGTVTKGNQVMELR 612
>gi|113374069|dbj|BAF03596.1| hypothetical protein [Staphylococcus lugdunensis]
Length = 635
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 233/632 (36%), Positives = 359/632 (56%), Gaps = 25/632 (3%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
M++ +LA I+ VGGK+NI HC TRLR LK + DGVVTVV+
Sbjct: 1 MSERDRKLAIHILEAVGGKENIVNYTHCATRLRIVLKRSIPDAKKKVASMDGVVTVVENN 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL 120
GQ+QVVIGN V VY+ + G + S +D+D+ +G + +R IA +S +F P + L
Sbjct: 61 GQFQVVIGNAVASVYQEFEGLLGEENQQS--SDEDSEKGTIINRIIATMSAVFAPFIYVL 118
Query: 121 SAAGMIKGVVAIMAALGVA-KTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
+AAG+++G++ I L + + G Y V N F FLP+ +AITAAK FK+N + A+
Sbjct: 119 AAAGILQGILIIAKMLFSSFEKTGTYEVFNFISWAPFTFLPIFIAITAAKHFKVNTYIAV 178
Query: 180 AIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAA 239
A ALV P++A +T TF G+P+ +SY S+VLP +
Sbjct: 179 ACCAALVSPDLAGIVERIGSGHTF------------TFIGIPL--SETSYTSSVLPPLLL 224
Query: 240 VWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD 299
VW + +EK K I +V++ VPFF+++I VPL L+IGP+ S A+ + F +
Sbjct: 225 VWVLSYVEKYLNKYIHEVIRPLFVPFFSIVIMVPLTLLIIGPLASGAAHGIAQGFNWLVA 284
Query: 300 FSPVLYGIVLGAAWQVLVMFGLHWGLVP--LAILELQKGPGVILVASIAICFAQAGALLN 357
+P L G+++GA WQV V+FG+HWG+ P LA E K +IA+ AQ GA++
Sbjct: 285 VAPWLAGLLIGAFWQVFVIFGVHWGITPMVLANFEQYKSDAFQAFQTIAV-IAQFGAVMG 343
Query: 358 IMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDV 417
+ +T+ + ++++S+ A I+ +FG+TEP++YG+ L + PFI+ CISG + +FF+
Sbjct: 344 VFFKTRNKDLKRVSLSAGITGIFGITEPSMYGVNLRFKKPFIIACISGGIGALVASFFNP 403
Query: 418 KMQVMGGM-GLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEK- 475
K G+ G I + N ++ L+ +L L Q++ E+
Sbjct: 404 KYYAYAGLPGPITIVNGYSPDNISSIWGILLGSAVAIILPIILIQVLGYGEDVTEQVERV 463
Query: 476 DAAESLDSEKERVSAGITEQVVT---SPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVG 532
D E + ++ ++Q+ T +PL G VVAL + D +FA G MGKG+AI+P
Sbjct: 464 DVEEGHEINEQTRLTTTSDQLETEIHAPLKGLVVALSEVDDPIFAEGMMGKGLAIQPESY 523
Query: 533 EVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQ 592
EV AP GVI ++ + HAIG+ + +G ELL+HVG+DTV L+G+GF V + +V++GQ
Sbjct: 524 EVTAPLKGVISMVAVSKHAIGITSPEGIELLVHVGLDTVQLNGQGFELLVAENDQVEEGQ 583
Query: 593 LLLSFDIDTIKEAGYPVTTPIIVTNTANYKQI 624
LL FD + IKE GY + TP+I+TN+ ++ I
Sbjct: 584 PLLRFDANYIKEQGYELITPVIITNSDEFEDI 615
>gi|47095580|ref|ZP_00233188.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 1/2a F6854]
gi|153176081|ref|ZP_01931340.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes FSL N3-165]
gi|153184270|ref|ZP_01935029.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes J0161]
gi|153192562|ref|ZP_01939522.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes J2818]
gi|153197389|ref|ZP_01941639.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes 10403S]
gi|47016010|gb|EAL06935.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes str. 1/2a F6854]
gi|126942773|gb|EBA20507.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes J0161]
gi|127633108|gb|EBA22526.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes 10403S]
gi|127763599|gb|EBA24433.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes J2818]
gi|133728794|gb|EBA30492.1| PTS system, beta-glucoside-specific, IIABC component [Listeria
monocytogenes FSL N3-165]
Length = 617
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 238/644 (36%), Positives = 369/644 (57%), Gaps = 38/644 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +LAK+I+ VGGK+N+ ++ HC+TRLRF LKD+SK + L D V+ AG Q+
Sbjct: 2 DYNQLAKEILQAVGGKNNVNEVYHCITRLRFQLKDQSKVNEKQLKGLDKVMGTNVAGNQF 61
Query: 64 QVVIGNHVPDVYETVL--KVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLS 121
QV+IGN VP V++ + A + E + F +SG+F P+L ++
Sbjct: 62 QVIIGNDVPKVFDALAAENPAWKNKETTNKTTRQKGIKGFFSNIFDALSGVFAPILPAIA 121
Query: 122 AAGMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
AG+IKG +A+ +LG TD Y +L A GDG+F FLP+++A++AA+ FK N F AL
Sbjct: 122 GAGLIKGFMALFVSLGWLATDTETYRILLAIGDGVFYFLPILVAVSAARYFKANMFVALG 181
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
IG AL+YP++ A +A TP F GLP+ +Y +V+P++ A+
Sbjct: 182 IGAALLYPDLTALLSA--------GTTP-------HFIGLPVT--PVTYAYSVIPILLAI 224
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
W + +EK +IIP +K+ VP T+ I VPL +VIGP+ ++ D V + +
Sbjct: 225 WIMSYVEKWVDRIIPTSLKLLFVPLITMFIVVPLTLVVIGPLGTFVGDGVSGGINWLLNN 284
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIM 359
V+ GI++G A ++VM G+H+ +VP I L K G L + +QAGA +
Sbjct: 285 GGVIGGILIGGAMAIIVMTGMHYAIVPFVISNLAKYGYDKFLPLTYISNMSQAGATFGVF 344
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
R K++K++ L+ ++AL GVTEPA+YGI + + PF+ + I GA G + F VK
Sbjct: 345 FRAKDKKLKSLAFSTGLTALMGVTEPAMYGINVVYKRPFMASLIGGAAGGGFAMMFGVKA 404
Query: 420 QVM-GGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
V+ G G+ +P + T ++ LIA+ F++ + + FG + A
Sbjct: 405 YVLTGNGGIPGLPGLV----GDTFVYALIAMALAFIVALIFSYI------FGIDEQMVEA 454
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
+ E+++AG +++ +P+ GE+V + D FA MGK +AI+P+ G++ APA
Sbjct: 455 TPV---AEKIAAGT--EILQAPVTGELVKMSQVNDTTFADEIMGKSIAIKPNEGKLYAPA 509
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
+G I LF T HAI + +D+GAE+L+HVG+DTV LDG FTAHV G V++G LL++FD
Sbjct: 510 NGTIISLFKTKHAIAMKSDNGAEILLHVGIDTVKLDGNYFTAHVATGDVVEQGDLLVTFD 569
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
++ I E Y TT +++TNT Y +E G + GNQ++EL+
Sbjct: 570 MEKIAEK-YDTTTMMVITNTNEYAVVEAKENGIVTKGNQVMELR 612
>gi|16804809|ref|NP_466294.1| hypothetical protein lmo2772 [Listeria monocytogenes EGD-e]
gi|16412272|emb|CAD00985.1| lmo2772 [Listeria monocytogenes]
Length = 617
Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats.
Identities = 237/644 (36%), Positives = 368/644 (57%), Gaps = 38/644 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +LAK+I+ VGGK+N+ ++ HC+TRLRF LKD+SK + L D V+ AG Q+
Sbjct: 2 DYNQLAKEILQAVGGKNNVNEVYHCITRLRFQLKDQSKVNEKQLKGLDKVMGTNVAGNQF 61
Query: 64 QVVIGNHVPDVYETVL--KVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLS 121
QV+IGN VP V++ + A + E + F +SG+F P+L ++
Sbjct: 62 QVIIGNDVPKVFDALAAENPAWKNKETTNKTTRQKGIKGFFSNIFDALSGVFAPILPAIA 121
Query: 122 AAGMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
AG+IKG +A+ +LG TD Y +L A GDG+F FLP+++A++AA+ FK N F AL
Sbjct: 122 GAGLIKGFMALFVSLGWLATDTETYRILLAIGDGVFYFLPILVAVSAARYFKANMFVALG 181
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
IG AL+YP++ A +A TP F GLP+ +Y +V+P++ A+
Sbjct: 182 IGAALLYPDLTALLSA--------GTTP-------HFIGLPVT--PVTYAYSVIPILLAI 224
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
W + +EK +IIP +K+ VP T+ I VPL +VIGP+ ++ D V + +
Sbjct: 225 WIMSYVEKWVDRIIPTSLKLLFVPLITMFIVVPLTLVVIGPLGTFVGDGVSGGINWLLNN 284
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIM 359
+ GI++G A ++VM G+H+ +VP I L K G L + +QAGA +
Sbjct: 285 GGAIGGILIGGAMAIIVMTGMHYAIVPFVISNLAKYGYDKFLPLTYISNMSQAGATFGVF 344
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
R K++K++ L+ ++AL GVTEPA+YGI + + PF+ + I GA G + F VK
Sbjct: 345 FRAKDKKLKSLAFSTGLTALMGVTEPAMYGINVVYKRPFMASLIGGAAGGGFAMMFGVKA 404
Query: 420 QVM-GGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
V+ G G+ +P + T ++ LIA+ F++ + + FG + A
Sbjct: 405 YVLTGNGGIPGLPGLV----GDTFVYALIAMALAFIVALIFSYI------FGIDEQMVEA 454
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
+ E+++AG +++ +P+ GE+V + D FA MGK +AI+P+ G++ APA
Sbjct: 455 TPV---AEKIAAGT--EILQAPVTGELVKMSQVNDTTFADEIMGKSIAIKPNEGKLYAPA 509
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
+G I LF T HAI + +D+GAE+L+HVG+DTV LDG FTAHV G V++G LL++FD
Sbjct: 510 NGTIISLFKTKHAIAMKSDNGAEILLHVGIDTVKLDGNYFTAHVATGDVVEQGDLLVTFD 569
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
++ I E Y TT +++TNT Y +E G + GNQ++EL+
Sbjct: 570 MEKIAEK-YDTTTMMVITNTNEYAVVEAKENGIVTKGNQVMELR 612
>gi|50119802|ref|YP_048969.1| PTS system, IIabc component [Erwinia carotovora subsp. atroseptica
SCRI1043]
gi|49610328|emb|CAG73772.1| PTS system, IIabc component [Erwinia carotovora subsp. atroseptica
SCRI1043]
Length = 644
Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats.
Identities = 229/642 (35%), Positives = 345/642 (53%), Gaps = 44/642 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y +L DI+A GGK N++KL HC TRLRF D + + K GV++VV GGQ+
Sbjct: 7 NYQKLGVDILALSGGKQNVSKLTHCATRLRFEFNDSHAVQAEAIAKLPGVISVVDRGGQF 66
Query: 64 QVVIGNHVPDVYETVLKVAG-ISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
QVVIGN V Y +L G ++G+ + D + +G +F + I+++S F P++ ++
Sbjct: 67 QVVIGNDVQITYRAILNEIGEMNGQRTSDKNKQQKKGGIFSQIISVISTTFTPVIPAITG 126
Query: 123 AGMIKGVVAIMAALGVAKTDGA-YVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAI 181
AGMIK ++AI+ G+ D Y +L+ D F FLP++LA A+ +F N A+ I
Sbjct: 127 AGMIKALLAILKLTGLISADSTTYRLLDTISDAAFFFLPVLLAYGASIKFACNPILAMTI 186
Query: 182 GFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVW 241
AL++PN+A L +G PI +F G+P+ + Y +VLP+I VW
Sbjct: 187 AGALLHPNLAQ---------LLASGGPI------SFIGIPVRL--ADYAGSVLPIILTVW 229
Query: 242 AGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFS 301
+ IE+ +KI P ++ F P LL T PLA +VIGP + +DLV + I +
Sbjct: 230 IMSYIERFAEKISPSMITFFTKPMIVLLFTAPLALVVIGPFGIFLNDLVASGAAIIDGKA 289
Query: 302 PVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-------GPGVILVASIAICFAQAGA 354
L +++G LV+ G W + P+A +L + GPG++ A AQ A
Sbjct: 290 SWLIPMLMGGLQPFLVITGTAWAMTPIATSQLTRNGFEMINGPGML-----ASNIAQGAA 344
Query: 355 LLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAF 414
L + +TK + ++QL+ A +AL G+TEP++YG+TL ++ P I I G G Y
Sbjct: 345 TLCVAFKTKNKNLKQLASSAGFTALLGITEPSLYGVTLKLKKPLIAAMIGGGCAGIYAGL 404
Query: 415 FDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLI-------KIPN 467
+ GL A+P+FI N M ++H LI V+ F LT ++ + N
Sbjct: 405 AGLVRYAFVSPGLAALPAFI-GENPMNIVHALITCAIAIVVTFALTWIMGFDDPVDETDN 463
Query: 468 LFGGPSEKDAAESLDSEKERVSAGITE-----QVVTSPLAGEVVALEDTPDAVFASGAMG 522
++ DA +S + + TE Q + SPL+G++VAL D D VF+ G +G
Sbjct: 464 AQTDSTQSDARQSAPAANTTQKSQATENHAEPQTILSPLSGKLVALSDINDDVFSQGLLG 523
Query: 523 KGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHV 582
+GVAI P GEVVAP G I + HA+G+ TD G ELLIHVG+DTV L+GK FT ++
Sbjct: 524 QGVAIIPDNGEVVAPVSGEIITFLESKHAVGIRTDSGLELLIHVGLDTVNLNGKHFTGYI 583
Query: 583 VQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQI 624
G +V G L+SFD+ I GY TP+++ N+ Y +
Sbjct: 584 KPGDRVTAGDRLISFDLHEITRLGYDPITPVVIINSDEYASV 625
>gi|118066608|ref|ZP_01534867.1| PTS system, beta-glucoside-specific IIABC subunit [Serratia
proteamaculans 568]
gi|118019338|gb|EAV33251.1| PTS system, beta-glucoside-specific IIABC subunit [Serratia
proteamaculans 568]
Length = 621
Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats.
Identities = 225/646 (34%), Positives = 350/646 (54%), Gaps = 42/646 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +L +I+A VGGK N++KL HC TRLR D+S + + GV++VV+ GGQ+
Sbjct: 2 DYKQLGLEILARVGGKGNVSKLTHCATRLRMEFNDDSLVEAKAIEALPGVISVVERGGQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
Q+V+GN+V + T+ K G + EG G + + I+++S F P++ ++ A
Sbjct: 62 QIVVGNNVQQTFRTLQKEIG-ALEGRQSDKKSQARGGVVSQIISVISTTFTPVIPAITGA 120
Query: 124 GMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GMIK ++AI+ G + Y +L+ D F FLP++LA AA +F+ N A+ I
Sbjct: 121 GMIKALLAILKLTGTIDAASPTYHLLDTIADAAFFFLPVLLAYGAAIKFECNPILAMTIA 180
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L++PN+A L AG PI+ F G+P+ + Y +VLP+I VW
Sbjct: 181 GVLLHPNLAQ---------MLAAGAPID------FIGIPVRM--ADYAGSVLPIIFTVWL 223
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+ IE+ +K+ P ++K F P LL+T PLA +V+GP + +DLV A + +
Sbjct: 224 MSYIERFAEKVSPTMIKFFTKPMIILLVTAPLALVVVGPFGIFLNDLVAAGAAIVDGKAS 283
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-------GPGVILVASIAICFAQAGAL 355
L +++G LV+ G W + P+A +L K GPG++ A AQ A
Sbjct: 284 WLIPMLMGGLQPFLVITGTAWAMTPIATGQLSKNGFEMINGPGML-----ASNIAQGAAT 338
Query: 356 LNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFF 415
L + RTK + +RQL+ A +AL G+TEP++YG+TL +R P I I G G Y
Sbjct: 339 LCVAFRTKNKNLRQLASSAGFTALLGITEPSLYGVTLKLRRPLIAAMIGGGCAGVYAGLS 398
Query: 416 DVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEK 475
+ GL A+P+FI N M ++H L+ V+ F LT ++ F P E+
Sbjct: 399 GLVRYAFVSPGLAALPAFI-GENPMNIVHALVTCAIAIVVTFALTWILG----FEDPVEE 453
Query: 476 DAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVV 535
S ++ EQ + SPL+G++VAL+ D VF+ G +G+GVAI P G +
Sbjct: 454 QETAVTGSHRD------AEQQIFSPLSGQLVALDQVNDDVFSQGLLGQGVAIRPQEGLLR 507
Query: 536 APADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLL 595
AP DG + P+ HA+G+ D+G ELL+H+G+DTV L G+ F++++ G +VK G L+
Sbjct: 508 APLDGEVVTFLPSMHAVGIKGDNGVELLVHIGIDTVNLAGQHFSSNLKIGDRVKMGDELV 567
Query: 596 SFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
FD+ I GY +TTP++V N+ ++ Q+ G I G ++ L
Sbjct: 568 RFDLAAIAALGYDLTTPVLVVNSEDFPQLSCRQPGRIGFGEPIISL 613
>gi|116871689|ref|YP_848470.1| PTS system, beta-glucoside-specific IIABC component [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116740567|emb|CAK19687.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 624
Score = 355 bits (911), Expect = 5e-96, Method: Composition-based stats.
Identities = 234/629 (37%), Positives = 355/629 (56%), Gaps = 27/629 (4%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVV 66
ELAK+I+A VGG++N+T+++HC TRLRF LK AD + + GV+ V GQ+QVV
Sbjct: 5 ELAKEILALVGGEENVTEVMHCFTRLRFHLKKIDLADVEKIEALPGVINVQIQSGQFQVV 64
Query: 67 IGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMI 126
IGN V VY+ ++K+ S + + D +GNL RF ++S +F P++ ++ AGM+
Sbjct: 65 IGNKVSKVYKELIKLGDFKQGDSSEIEQDKKKGNLIGRFFEVISTIFSPIIPAIAGAGML 124
Query: 127 KGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFAL 185
KG++ ++ ALG V +T +L D +F FLP LA++AA+ FK N+F A+A+ +
Sbjct: 125 KGLLGLVTALGLVEQTSSVVTMLQIVSDCVFYFLPFFLAVSAARIFKTNEFIAVAVAGGM 184
Query: 186 VYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGAK 245
+YP I A P FG+P+ P +Y STV+P+I AVW +
Sbjct: 185 MYPIIVEGAKA----------IANGGPTGLDLFGVPV--PFINYSSTVIPIILAVWILSY 232
Query: 246 IEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVLY 305
+ + +PD + + P LLI +P+ +VIGP+ S+ + T ++ ++
Sbjct: 233 VYRWVDSWMPDSLGIVFTPTVVLLIIIPVQLIVIGPLGSYLGIWIAEGVTWLFAHGGIIA 292
Query: 306 GIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTKE 364
G +LGA +LVM G+H+GL+P+AI + G +L + QA A L + ++TK
Sbjct: 293 GGLLGATRPLLVMVGMHYGLMPIAIQNIAVLGHDYLLPVFLMANMGQAAAALAVFLKTKN 352
Query: 365 EKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGG 424
+ ++ ++ + I+ G+TEPA+YG+ L ++ PFI I + GA++ V
Sbjct: 353 KDLKAIAGSSTIAGFLGITEPAMYGVNLKLKKPFIAALIGSGVGGAFVTGLGVTGNAFVL 412
Query: 425 MGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDSE 484
G+ ++P F+ +I +I I VL F L+K + GP+ + +
Sbjct: 413 PGIMSLPVFMGPKFIYLIIGLIITITITIVLTF----LMKFED---GPT----VGTTTKK 461
Query: 485 KERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRL 544
K+ ++ I + SP+ G VAL+D PD FA MGKG+AI P+VGE+ AP G I
Sbjct: 462 KQNKASSIEHTTILSPVVGTTVALKDVPDKTFAEEIMGKGMAINPTVGEIYAPFTGEIAT 521
Query: 545 LFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKE 604
F T HAIGL +D+G ELLIHVG+DTV L+G F V QG +VK G LLL+FDI IK+
Sbjct: 522 FFKTGHAIGLRSDEGVELLIHVGIDTVNLNGAHFHPQVKQGDQVKTGDLLLTFDIAEIKK 581
Query: 605 AGYPVTTPIIVTNTANYKQIEVLAKGEIQ 633
AGY TP+IVTNT NY ++V+A E Q
Sbjct: 582 AGYETVTPVIVTNTENY--LDVIATDENQ 608
>gi|50123306|ref|YP_052473.1| PTS system, IIabc component [Erwinia carotovora subsp. atroseptica
SCRI1043]
gi|49613832|emb|CAG77284.1| PTS system, IIabc component [Erwinia carotovora subsp. atroseptica
SCRI1043]
Length = 634
Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats.
Identities = 229/647 (35%), Positives = 370/647 (57%), Gaps = 29/647 (4%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D+ LA++I+ +GG+ N+ L HC+TRLRFSLKD SK + L K DGV+ V++ QY
Sbjct: 3 DFRLLAREIIELIGGEKNVVSLTHCITRLRFSLKDSSKFNKAALDKLDGVILAVESNSQY 62
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAV--EGNLFDRFIALVSGLFQPMLGTLS 121
QVVIGN V VY ++ GI G+ D++D++ +GN+ R +S + P++ L+
Sbjct: 63 QVVIGNDVTTVYRILVDEFGIKGDALSDSEDESSGKKGNIVGRVFNKMSSILVPIVPALA 122
Query: 122 AAGMIKGVVAIMAALGVAKTDGA-YVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
AGM+K + I++ T G+ Y +L AA + +F FLPL+LA + AK F + F ++A
Sbjct: 123 GAGMLKAFLVILSTYHFIDTAGSTYKILAAASNSVFYFLPLLLAFSCAKAFNAHPFVSVA 182
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
I AL+ P F G + F G+P++ Y ST++P I A+
Sbjct: 183 IVGALLEPT--------------FTGLMAKPGDIVQFMGIPVVL--MKYSSTLIPAILAI 226
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
WA + +E+ K++I +++ VP +LI VP+ + +GP+ + D +GA +
Sbjct: 227 WAYSYLERLLKRVIHQSIEMVAVPMLGMLIMVPVIVIAVGPIGVYLGDGIGAGIAYMNGV 286
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASIAICFAQAGALLNIM 359
S +L G +LG W +LV+FGLHWG+VP+ + L +G I A+ A FAQAGA +
Sbjct: 287 SGMLTGAILGGGWTLLVIFGLHWGMVPVMLNNLALRGFDTIKPATAAATFAQAGAAFGVF 346
Query: 360 MRTKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVK 418
++ K++K++ ++ + + ALF GVTEP +YGI++ + P + + I+G + G ++
Sbjct: 347 LKAKDKKLKSFALSSMVPALFAGVTEPIVYGISIKYKRPLVASLIAGTVAGGFIGSMGTT 406
Query: 419 MQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
+ L +P+F+ + T ++LI I +F L LT L+ PS
Sbjct: 407 VMAYVFPALTTLPAFM----TTTFAYYLIGIGMSFTLSALLTYLLGFDESLSEPSAATPK 462
Query: 479 ESLDSEKERVSA----GITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEV 534
+ S + +A G++ ++ +PL G +V L DAVFAS MGKG+AI PS G V
Sbjct: 463 AATSSAPQTTTASSQNGLSGIMLAAPLNGTIVPLTSVNDAVFASEVMGKGIAIYPSEGVV 522
Query: 535 VAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLL 594
+P +G + LF + HAIG+ +DDG E+L+HVG+DTV L+G+ F +HV +G +V GQLL
Sbjct: 523 TSPVNGTVSKLFHSKHAIGITSDDGVEILVHVGIDTVRLNGECFASHVNEGDRVTTGQLL 582
Query: 595 LSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
L+F+++T+ G+ VTTP+++ NT +Y+ I + + + L+ L
Sbjct: 583 LTFELETLIAKGFDVTTPVVIANTDDYQTISATEQHRVSNHHTLMTL 629
>gi|148378655|ref|YP_001253196.1| PTS system, beta-glucoside-specific IIabc component [Clostridium
botulinum A str. ATCC 3502]
gi|153932996|ref|YP_001383038.1| PTS system, beta-glucoside-specific, IIABC component [Clostridium
botulinum A str. ATCC 19397]
gi|153935429|ref|YP_001386587.1| PTS system, beta-glucoside-specific, IIABC component [Clostridium
botulinum A str. Hall]
gi|148288139|emb|CAL82207.1| PTS system, beta-glucoside-specific IIabc component [Clostridium
botulinum A str. ATCC 3502]
gi|152929040|gb|ABS34540.1| PTS system, beta-glucoside-specific, IIABC component [Clostridium
botulinum A str. ATCC 19397]
gi|152931343|gb|ABS36842.1| PTS system, beta-glucoside-specific, IIABC component [Clostridium
botulinum A str. Hall]
Length = 613
Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats.
Identities = 225/641 (35%), Positives = 373/641 (58%), Gaps = 37/641 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y ++A +I+ +GG++NI LVHC TRLRF++K E KA+ + + GV+++VK GGQY
Sbjct: 2 NYEKMASEILKAIGGQENINSLVHCATRLRFNIKSEEKANDEEVKSIKGVLSLVKKGGQY 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
Q+VIG+ V VY+ ++K+A + + S D ++ EG + DR +++++G PM+ L+ A
Sbjct: 62 QLVIGSDVDKVYKEIMKIAKL--DSSKDNNEKKKEG-IVDRVLSVITGSIAPMIPLLAGA 118
Query: 124 GMIK-GVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM K ++ + + K+ +++L D F F+P+ +A +AAK FK NQ+ A +
Sbjct: 119 GMGKVLLLILSLLGILDKSSQTFIILKFIFDTGFYFMPVFVAFSAAKIFKCNQYLASFVC 178
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
++++P + A KP+Y F G+P+ + Y S ++ I VW
Sbjct: 179 LSMLHPEWVSLVAAGKPVY---------------FLGIPLSL--AKYSSQLVTAILIVWV 221
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+ IEK K +PD++KVF+ P +LIT PL F++IGPV ++ + LV +
Sbjct: 222 MSYIEKYVYKYVPDMIKVFMAPLLVILITAPLGFVIIGPVGNYIAQLVADTVLYVQQHFG 281
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC--FAQAGALLNIMM 360
++ +L A + LV G+H L P+ ++ +++ + IA+C +QA A L + +
Sbjct: 282 IVAIPILAAVYPWLVSIGMHKALSPICVMLIEQNGFDPVTRVIALCSNISQAAAALAVSL 341
Query: 361 RTKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
+TK ++++Q++ + I+A G+TEPA+YG+TL ++ P I G + G + ++K
Sbjct: 342 KTKNKELKQIAFSSSITAFLGGITEPAMYGVTLKLKKPMYACMIGGVVAGLFAGIVNLKA 401
Query: 420 QVMGGMGLFAIPSFI-EASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
V GL ++P ++ E +N+ LIH +I ++ V+ F T +I F P E++
Sbjct: 402 FVYVTPGLLSLPMWVSEGTNN--LIHAIITLIIAAVVTFIATLIIG----FDDPVEQNKE 455
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
E +K+ + I + ++T P+ G+ V L+D D F+SG MG G+ I PS G+V AP
Sbjct: 456 E----QKKVMEENIYKNILT-PVKGDTVPLKDIDDETFSSGIMGAGIGIIPSEGKVYAPG 510
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
DG++ F T HAIG+ +D E+LIHVG+DTV+LDGK F + QG VKKG LLL FD
Sbjct: 511 DGIVSACFKTGHAIGMIIND-IEVLIHVGIDTVSLDGKYFNLAIKQGQNVKKGDLLLEFD 569
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
ID IK+AGY +TT +I+TN+ +Y + K ++ + LL
Sbjct: 570 IDKIKDAGYDLTTIVIITNSNDYMDVLPTNKNKVDKEDVLL 610
>gi|126700755|ref|YP_001089652.1| PTS system, IIabc component [Clostridium difficile 630]
gi|115252192|emb|CAJ70030.1| PTS system, IIabc component [Clostridium difficile 630]
Length = 613
Score = 346 bits (887), Expect = 3e-93, Method: Composition-based stats.
Identities = 228/640 (35%), Positives = 354/640 (55%), Gaps = 42/640 (6%)
Query: 9 AKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIG 68
+++I+ +VGGK+NI LVHC TRLRF LKD SK + + L+K V++VV +GGQYQVVIG
Sbjct: 7 SEEIIKYVGGKENIISLVHCATRLRFKLKDTSKTNKEELLKMKDVLSVVNSGGQYQVVIG 66
Query: 69 NHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMIKG 128
N V D +ET++K A + G+ + ++ + ++ + +SG F P++ L+ AGMIK
Sbjct: 67 NKVTDYFETIIKKAVLQGQ---NTEEQGEKVSIVSKIFESISGAFSPLIPALAGAGMIKA 123
Query: 129 VVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFALVY 187
++ I+ + ++ T Y +L+AAG+ +F FLP+ L IT A + N + IG AL+
Sbjct: 124 LLTILTTMKWMSDTSSTYAILSAAGNAVFYFLPIFLGITLAIKLSANPYVGGVIGAALLD 183
Query: 188 PNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGAKIE 247
PN A A+ + FFG+P+ A Y V P+ A++ ++
Sbjct: 184 PNFTALIGAKGG---------------ANFFGMPVT--AIDYSFGVFPIFVAIFIYYYVD 226
Query: 248 KGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVLYGI 307
K KKII +++F+VP +LL+ VPL ++ GP+ + D++ +F G+++F+ V+ G
Sbjct: 227 KLLKKIILKDLQLFLVPMISLLVMVPLTVILFGPIATNVGDIISNIFMGLFEFNRVIAGA 286
Query: 308 VLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRT-KEE 365
+G A L + GLHWG P+ + L G I A++A FAQ G + + M+ K +
Sbjct: 287 AIGIAMPFLAVLGLHWGFTPITLQNLATMGGDPIEGAAVAAVFAQIGIAIGLFMKVRKSK 346
Query: 366 KVRQLSIPAFISA----LFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K +L + A +A L GVTEP IYGI L R + I+G + G F V
Sbjct: 347 KNSELKVLAGSTAVTGILAGVTEPIIYGIILRYRRMIPVLAIAGGIGGGICGVFGVTCNA 406
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
+F++P + + +++ I VLG L+ + ++ A
Sbjct: 407 YVFHNIFSMPVY------TPFLGYILGIGTALVLGAVLSYFFGLSKEECEEGNEEVAFDE 460
Query: 482 DSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGV 541
D GI E + SP+ G + L + D VFASG +G G+AI PS GEVV+P +G
Sbjct: 461 DD-------GIEE--ILSPIEGLQIELSEVEDEVFASGTIGNGMAIIPSKGEVVSPVNGT 511
Query: 542 IRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDT 601
I +FPT HAIG+ +D G E+LIHVG++T LDGK +T H+ G KVKKG ++SFD D
Sbjct: 512 ITTIFPTKHAIGITSDKGVEILIHVGLNTTMLDGKYYTTHMNAGDKVKKGDRIVSFDKDK 571
Query: 602 IKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
I+ GY + TPII+TNT + + V I++G ++++
Sbjct: 572 IEGEGYSIVTPIILTNTNDLADVIVKENKHIKIGTPVIKV 611
>gi|62198728|gb|AAX76614.1| BglH [Pectobacterium carotovorum subsp. carotovorum]
Length = 635
Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats.
Identities = 227/642 (35%), Positives = 343/642 (53%), Gaps = 48/642 (7%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y +L DI+A GGK N++KL HC TRLRF D + + K GV++VV GGQ+
Sbjct: 2 NYQKLGVDILALSGGKQNVSKLTHCATRLRFEFNDSHAVQAEAIAKLPGVISVVDRGGQF 61
Query: 64 QVVIGNHVPDVYETVLKVAG-ISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
QVVIGN V Y +L G ++G+ + + + +G +F + I+++S F P++ ++
Sbjct: 62 QVVIGNDVQITYRAILNEIGEMNGQRTAGSKEPQKKGGIFSQIISVISTTFTPVIPAITG 121
Query: 123 AGMIKGVVAIMAA--LGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
AGMIK V A + Y +L+ D F FLP++LA A+ +F N A+
Sbjct: 122 AGMIKAPVGDPQADWVKFPPNSTTYRLLDTISDAAFFFLPVLLAYGASIKFACNPILAMT 181
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
I AL++PN+A L +G PI +F G+P+ + Y +VLP+I V
Sbjct: 182 IAGALLHPNLAQ---------LLASGGPI------SFIGIPVRL--ADYAGSVLPIILTV 224
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
W + IE+ +KI P ++K F P LL T PLA +VIGP + +DLV + I
Sbjct: 225 WIMSYIEQFAEKISPSMIKFFTKPMIVLLFTAPLALVVIGPFGIFLNDLVASGAAIIDGK 284
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-------GPGVILVASIAICFAQAG 353
+ L +++G LV+ G W + P+A +L + GPG++ A AQ
Sbjct: 285 ASWLIPMLMGGLQPFLVITGTAWAMTPIATSQLTRNGFEMINGPGML-----ASNIAQGA 339
Query: 354 ALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLA 413
A L + +TK + ++QL+ A +AL G+TEP++YG+TL ++ P I I G G Y
Sbjct: 340 ATLCVAFKTKNKNLKQLASSAGFTALLGITEPSLYGVTLKLKKPLIAAMIGGGCAGIYAG 399
Query: 414 FFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGP- 472
+ GL A+P+FI N M ++H LI V+ F LT ++ F P
Sbjct: 400 LAGLVRYAFVSPGLAALPAFI-GENPMNIVHALITCAIAIVVTFALTWIMG----FDDPV 454
Query: 473 SEKDAAESLD---------SEKERVSAGITE-QVVTSPLAGEVVALEDTPDAVFASGAMG 522
E D A + + ++K + + G E Q + SP++G++VAL D D VF+ G +G
Sbjct: 455 DETDTAHTSNGQSTSVAEPAQKPQAAQGHAETQTIQSPMSGKLVALSDINDDVFSQGLLG 514
Query: 523 KGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHV 582
+GVAI P GEV+AP G I + HA+G+ D G ELLIHVG+DTV L+GK FT +V
Sbjct: 515 QGVAIIPDSGEVIAPVSGEIITFLESKHAVGIRADSGLELLIHVGLDTVNLNGKHFTGYV 574
Query: 583 VQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQI 624
G +V G L+SFD+ I GY TP+++ N+ +Y +
Sbjct: 575 KPGDRVTAGDRLISFDLHEITRLGYDPITPVVIINSDDYTSV 616
>gi|15674662|ref|NP_268836.1| beta-glucoside permease IIABC component [Streptococcus pyogenes M1
GAS]
gi|13621778|gb|AAK33557.1| beta-glucoside permease IIABC component [Streptococcus pyogenes M1
GAS]
Length = 620
Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats.
Identities = 224/635 (35%), Positives = 346/635 (54%), Gaps = 33/635 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I+A VGGK NI ++ HCVTRLR LK++ K + V+ V++ GQYQ
Sbjct: 3 YQETAKAILAAVGGKTNIQRVTHCVTRLRLVLKNDEKVKDQQVKAISNVIGVMRKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLSAA 123
+++GN V + Y+ L + + D D + +G++ +R I ++G+ P++ L
Sbjct: 63 IILGNDVNNYYQAFLSLGHFDNQ---DEDHSSKAKGSILERLIETIAGVITPLIPALLGG 119
Query: 124 GMIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K V ++ LG+A D V +N GD + F+P+++A +AA RFK+ A I
Sbjct: 120 GMLKVVGILLPMLGLASADSQTVAFINFFGDAAYYFMPVMIAYSAAARFKVTPVLAATIA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L++P A KPL T FG P+ +SY S+V+P++ V+
Sbjct: 180 GILLHPAFVAMVAEGKPL---------------TLFGAPVT--PASYGSSVIPILMMVYL 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
IEK +++P V+K F+ P +LI+ LA +V+GP+ + IY +P
Sbjct: 223 MQYIEKWVNRLVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGQGLSNTMLAIYHVAP 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMR 361
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + +
Sbjct: 283 WLALAILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAFK 342
Query: 362 TKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
TK+++ RQ+++ A ISAL G+TEPA+YG+TL + P ISG L GA++ F ++
Sbjct: 343 TKQKQTRQVALAAGISALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAFIGFVNIASY 402
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ +P +I S + LIA A VL F LT + I E S
Sbjct: 403 TFVVPSIIGLPQYINPSGGANFTNALIAGTATIVLAFSLTWFMGID------EESPKQVS 456
Query: 481 LDSEKERVSAGI-TEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ ++ +V +G+ T+Q + +P+ GE++ L + PD F+S +G+G AI PS GEV AP D
Sbjct: 457 VAADMSQVKSGLSTKQTLYAPMTGEMLFLSEVPDETFSSKLLGEGFAILPSEGEVYAPFD 516
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + FPT HA+ L G E+LIHVG+DTV L G+GF V G VK+GQ LL DI
Sbjct: 517 GEVITFFPTKHAVALKNTRGVEVLIHVGIDTVELKGQGFEQLVSVGDVVKRGQALLKMDI 576
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
D I GY + +P++VTN+A +Q+E++ + + ++
Sbjct: 577 DFITSKGYSLISPVVVTNSA--EQLEIIIQDDKKM 609
>gi|153853745|ref|ZP_01995101.1| hypothetical protein DORLON_01092 [Dorea longicatena DSM 13814]
gi|149753495|gb|EDM63426.1| hypothetical protein DORLON_01092 [Dorea longicatena DSM 13814]
Length = 633
Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats.
Identities = 221/648 (34%), Positives = 362/648 (55%), Gaps = 21/648 (3%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
M DY +AK I+ VGGK+N+ LVHC+TRLRF+LKDES D + + GV+ ++K
Sbjct: 1 MKMDYESIAKKILQRVGGKENVISLVHCMTRLRFTLKDESIVDDEAVKNTKGVMGIMKKA 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL 120
GQYQ++IGN V +VY + K+ S E A + + N+F + +SG+ P++ +
Sbjct: 61 GQYQIIIGNDVANVYAELNKLGNFSNEVPKKAPQNKEKQNVFSMLMDTISGIMAPVIPAI 120
Query: 121 SAAGMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
A MIK ++ ++ +GV T G Y +L+ GDG F F+P+++AI+A+K+F N + A
Sbjct: 121 IGAAMIKVLLTLLPMIGVLSTKGDTYNLLSVMGDGAFFFMPVLIAISASKKFGTNMYYAA 180
Query: 180 AIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAA 239
+I +++PN + + A E+ F F +P+ + +SY +V+P+I A
Sbjct: 181 SIALIMLHPNFISFMNS--------ANDAKETVKFLKF--IPVTY--ASYAYSVIPIILA 228
Query: 240 VWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD 299
VW+ +E+ KI P V K F+ P +LI P+A +++GP+ + +++ + I+D
Sbjct: 229 VWSLKYVERLVDKITPVVTKNFLKPMLVVLIEAPIALIILGPLGAICGNVLSTVVYTIHD 288
Query: 300 -FSPVLYGIVLGAAWQVLVMFGLHWGLVP--LAILELQKGPGVILVASIAICFAQAGALL 356
+ G+V G + +VM G+H P L ++ I + + AQ A L
Sbjct: 289 KLGFIAIGLVAGV-YPFVVMAGMHHAFTPIKLGMIASTGFENFICIGELCSNMAQGAASL 347
Query: 357 NIMMRTKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFF 415
+ +++K + +Q++ + SALF G+TEPA+YG+TL ++ P + CI A G + FF
Sbjct: 348 AVAVKSKNKDFKQIAGSSAFSALFAGITEPALYGVTLRLKRPMLGACIGAAAGGLFGGFF 407
Query: 416 DVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEK 475
+K + + I ++E +L+ + I+ V+ F T +I ++
Sbjct: 408 QMKCFGIATPAIVTIVQYVEKGKPQSLLFAALTILLTIVVAFIATMIIGFEDVVD--END 465
Query: 476 DAAESLDSE-KERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEV 534
D + L++E KE V + SP G+ ++L + DA FA +GKG AI P G +
Sbjct: 466 DELDMLETESKEEVKVMENAIDIASPAEGKAISLSEVADATFAQEILGKGAAIVPEKGVI 525
Query: 535 VAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLL 594
AP DG + ++F T HA+GL ++G ELL+H+G+DTV L+GK F+ G VKKG +L
Sbjct: 526 YAPFDGKVDVMFETGHAVGLVGENGVELLVHIGIDTVNLEGKYFSPKKAAGDVVKKGDVL 585
Query: 595 LSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
+ FDI+ IKEAGY VTTP+IV+NT Y +E A GE+ + L++++
Sbjct: 586 IEFDIEKIKEAGYDVTTPVIVSNTDQYAIVEKTATGEVTKESNLIKVQ 633
>gi|153938493|ref|YP_001390012.1| PTS system, beta-glucoside-specific, IIABC component [Clostridium
botulinum F str. Langeland]
gi|152934389|gb|ABS39887.1| PTS system, beta-glucoside-specific, IIABC component [Clostridium
botulinum F str. Langeland]
Length = 613
Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 220/641 (34%), Positives = 372/641 (58%), Gaps = 37/641 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y ++A +I+ +GG++NI LVHC TRLRF++K E KA+ + + GV+++VK GGQY
Sbjct: 2 NYEKMASEILKAIGGQENINSLVHCATRLRFNIKSEEKANDEEVKSIKGVLSLVKKGGQY 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
Q+VIG+ V VY+ ++K+A + S + ++ + + DR +++++G PM+ L+ A
Sbjct: 62 QLVIGSDVDKVYKEIMKIAKLD---SSNDNNKTKKDGIVDRVLSVITGSIAPMIPLLAGA 118
Query: 124 GMIK-GVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM K ++ + + K+ +++L D F F+P+ +A +AAK FK NQ+ A +
Sbjct: 119 GMGKVLLLILSLLGILDKSSQTFIILKFIFDTGFYFMPVFVAFSAAKIFKCNQYLASFVC 178
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
++++P + A KP+Y F G+P+ + Y S ++ I VW
Sbjct: 179 LSMLHPEWVSLVAAGKPVY---------------FLGIPLSL--AKYSSQLVTAILIVWV 221
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
+ IEK K +PD++KVF+ P +LIT PL F+++GPV ++ + LV +
Sbjct: 222 MSYIEKYVYKYVPDMIKVFMAPLLVILITAPLGFIIVGPVGNYIAQLVADTVLYVQQHFG 281
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC--FAQAGALLNIMM 360
++ +L A + LV G+H L P+ ++ +++ + IA+C +QA A L + +
Sbjct: 282 IVAIPILAAVYPWLVSIGMHKALSPICVMLIEQNGFDPVTRVIALCSNISQAAASLAVSL 341
Query: 361 RTKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
+TK+++++Q++ + I+A G+TEPA+YG+TL ++ P I G + G + ++K
Sbjct: 342 KTKDKELKQIAFSSSITAFLGGITEPAMYGVTLKLKKPMYACMIGGVVAGLFAGIVNLKA 401
Query: 420 QVMGGMGLFAIPSFI-EASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAA 478
V GL ++P ++ E +N+ LI+ +I ++ V+ F T +I F P E++
Sbjct: 402 FVYVTPGLLSLPMWVSEGTNN--LIYAVITLIIAAVVTFIATLIIG----FDDPVEQNKE 455
Query: 479 ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPA 538
E +K+ + I + ++T P+ G+ V L+D D F+SG MG G+ I PS G+V AP
Sbjct: 456 E----QKKVMEENIYKNILT-PVKGDTVPLKDIDDETFSSGIMGAGIGIIPSEGKVYAPG 510
Query: 539 DGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFD 598
DG++ F T HAIG+ +D E+LIHVG+DTV+LDGK F + QG VKKG LLL FD
Sbjct: 511 DGIVSACFKTGHAIGMTIND-IEVLIHVGIDTVSLDGKYFNLAIKQGQNVKKGDLLLEFD 569
Query: 599 IDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
ID IK+AGY +TT +I+TN+ +Y + K ++ + LL
Sbjct: 570 IDKIKDAGYDLTTIVIITNSNDYMDVLPTNKNKVDKEDVLL 610
>gi|154505100|ref|ZP_02041838.1| hypothetical protein RUMGNA_02612 [Ruminococcus gnavus ATCC 29149]
gi|153794579|gb|EDN76999.1| hypothetical protein RUMGNA_02612 [Ruminococcus gnavus ATCC 29149]
Length = 602
Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats.
Identities = 229/644 (35%), Positives = 336/644 (52%), Gaps = 47/644 (7%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
M + Y +LA++IV VGGK+NI L HCVTRLRF LKD KADT L DGV+TVV+A
Sbjct: 1 MRRKYEKLAQEIVKKVGGKENIISLRHCVTRLRFQLKDVEKADTKGLEATDGVITVVQAL 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL 120
+Y VVIG HV +VY+ V AG+ + + L + +++G+ P L L
Sbjct: 61 SEYMVVIGQHVGEVYKEVCIQAGLDTAKENTCEKPEKKSGLETALLTVMAGI-GPTLYLL 119
Query: 121 SAAGMIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
A+GMIKG++A+ LG++ Y V+ A GDGL FLPL+L AK K+ F +
Sbjct: 120 GASGMIKGILAVCVMLGLSADTTVYTVMYALGDGLLYFLPLVLGYNLAKYCKIEPFVGVW 179
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
+ A+ YP I +E I + Y ST LP+I +V
Sbjct: 180 LAAAMCYPKIQG----------------LEISILG-------MNNTVHYTSTFLPIIFSV 216
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
+ I + +K + + K ++P TLL+ P LV GP +W ++ + + F
Sbjct: 217 LIASLIYRFLEKRMSETRKNLVIPLLTLLVAFPFGILVAGPFGNWMAEWLHRGIMALCGF 276
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVA-SIAICFAQAGALLNIM 359
SPVL G+++G WQVLV G+H + LA ++ G L+A S + FA +G +
Sbjct: 277 SPVLMGVLIGGLWQVLVSVGIHGIITVLAFADVLAGNSSPLLALSYSASFAVSGVAFAVF 336
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
MR++ +Q + +SA+ G TEPA+Y + P + F + C GAL GA FF + M
Sbjct: 337 MRSRNSGEKQTAKAGAVSAIMGATEPAMYALIKPDKKRFALCCAGGALGGATAGFFGISM 396
Query: 420 QVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
GMG+ + F + + L+ ++ VL FG T LI E
Sbjct: 397 HAYAGMGITGLFGFFQTGDVK-----LVGVLLMAVLPFGFTWLI---------------E 436
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
L +E+ A +E+++ + G V LE+ D VFAS A+G GV + G+V AP D
Sbjct: 437 MLLYRQEK--AVESEEIIVMSVNGSVEQLENAEDTVFASKALGDGVLLHSDDGKVYAPCD 494
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G+I+ +FPT HAIG+ + DG+E+LIH+G +TVAL+GK FT HV + +VK GQ+L FD
Sbjct: 495 GIIQTVFPTKHAIGIESTDGSEILIHMGNNTVALNGKYFTVHVKEKDEVKAGQILAEFDK 554
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
I+ GY P++VTN Y+ + G ++ LKK
Sbjct: 555 KEIEAQGYNCEIPMVVTNMEMYEMSGEPTYRNYKKGEEIFRLKK 598
>gi|71903122|ref|YP_279925.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS6180]
gi|71802217|gb|AAX71570.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS6180]
Length = 620
Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats.
Identities = 224/635 (35%), Positives = 346/635 (54%), Gaps = 33/635 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I+A VGGK NI ++ HCVTRLR LK++ K + V+ V++ GQYQ
Sbjct: 3 YQETAKAILAAVGGKTNIQRVTHCVTRLRLVLKNDEKVKDQQVKAISNVIGVMRKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLSAA 123
+++GN V + Y+ L + + D D + +G++ +R I ++G+ P++ L
Sbjct: 63 IILGNDVNNYYQAFLSLGHFDNQ---DEDHSSKAKGSILERLIETIAGVITPLIPALLGG 119
Query: 124 GMIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K V ++ LG+A D V +N GD + F+P+++A +AA RFK+ A I
Sbjct: 120 GMLKVVGILLPMLGLASADSQTVAFINFFGDAAYYFMPVMIAYSAAARFKVTPVLAATIA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L++P A KPL T FG P+ +SY S+V+P++ V+
Sbjct: 180 GILLHPAFVAMVAEGKPL---------------TLFGAPVT--PASYGSSVIPILMMVYL 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
IEK +++P V+K F+ P +LI+ LA +V+GP+ + IY +P
Sbjct: 223 MQYIEKWVNRLVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGQGLSNTMLAIYHVAP 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMR 361
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + +
Sbjct: 283 WLALAILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAFK 342
Query: 362 TKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
TK+++ RQ+++ A ISAL G+TEPA+YG+TL + P ISG L GA++ F ++
Sbjct: 343 TKQKQTRQVALAAGISALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAFIGFVNIASY 402
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ +P +I S I+ LIA A VL F LT + I E S
Sbjct: 403 TFVVPSIIGLPQYINPSGGANFINALIAGAATIVLAFSLTWFMGID------EESPKQVS 456
Query: 481 LDSEKERVSAGI-TEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ ++ +V +G+ T+Q + +P+ GE++ L + PD F+S +G+G AI PS G V AP D
Sbjct: 457 VAADMSQVKSGLSTKQTLYAPMTGEMLFLSEVPDETFSSKLLGEGFAILPSEGVVYAPFD 516
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + FPT HA+ L G E+LIHVG+DTV L G+GF V G VK+GQ LL DI
Sbjct: 517 GEVITFFPTKHAVALKNTRGVEVLIHVGIDTVELKGQGFEQLVSVGDVVKRGQALLKMDI 576
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
D I GY + +P++VTN+A +Q+E++ + + ++
Sbjct: 577 DFITSKGYSLISPVVVTNSA--EQLEIIIQDDKKM 609
>gi|94988098|ref|YP_596199.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS9429]
gi|94991985|ref|YP_600084.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS2096]
gi|94541606|gb|ABF31655.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS9429]
gi|94545493|gb|ABF35540.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS2096]
Length = 620
Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats.
Identities = 223/635 (35%), Positives = 345/635 (54%), Gaps = 33/635 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I+A VGGK NI ++ HCVTRLR LK++ K + V+ V++ GQYQ
Sbjct: 3 YQETAKAILAAVGGKTNIQRVTHCVTRLRLVLKNDEKVKDQQVKSISNVIGVMRKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLSAA 123
+++GN V + Y+ L + + D D + +G++ +R I ++G+ P++ L
Sbjct: 63 IILGNDVNNYYQAFLSLGHFDNQ---DEDHSSKAKGSILERLIETIAGVITPLIPALLGG 119
Query: 124 GMIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K V ++ LG+A D V +N GD + F+P+++A +AA RFK+ A I
Sbjct: 120 GMLKVVGILLPMLGLASADSQTVAFINFFGDAAYYFMPVMIAYSAAARFKVTPVLAATIA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L++P A KPL FG P+ +SY S+V+P++ V+
Sbjct: 180 GILLHPAFVAMVAEGKPL---------------ALFGAPVT--PASYGSSVIPILMMVYL 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
IEK +++P V+K F+ P +LI+ LA +V+GP+ + IY +P
Sbjct: 223 MQYIEKWVNRLVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGQGLSNTMLAIYHVAP 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMR 361
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + +
Sbjct: 283 WLALAILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAFK 342
Query: 362 TKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
TK+++ RQ+++ A ISAL G+TEPA+YG+TL + P ISG L GA++ F ++
Sbjct: 343 TKQKQTRQVALAAGISALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAFIGFVNIASY 402
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ +P +I S + LIA A VL F LT + I E S
Sbjct: 403 TFVVPSIIGLPQYINPSGGANFTNALIAGAATIVLAFSLTWFMGID------EESPEQVS 456
Query: 481 LDSEKERVSAGI-TEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ ++ +V +G+ T+Q + +P+ GE++ L + PD F+S +G+G AI PS GEV AP D
Sbjct: 457 VAADMSQVKSGLSTKQTLYAPMTGEMLFLSEVPDETFSSKLLGEGFAILPSEGEVYAPFD 516
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + FPT HA+ L G E+LIHVG+DTV L G+GF V G VK+GQ LL DI
Sbjct: 517 GEVITFFPTKHAVALKNTRGVEVLIHVGIDTVELKGQGFEQLVSVGDFVKRGQALLKMDI 576
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
D I GY + +P++VTN+A +Q+E++ + + ++
Sbjct: 577 DFITSKGYSLISPVVVTNSA--EQLEIIIQDDKKI 609
>gi|139474209|ref|YP_001128925.1| beta-glucoside-specific phosphotransferase system (PTS), IIABC
component [Streptococcus pyogenes str. Manfredo]
gi|134272456|emb|CAM30713.1| beta-glucoside-specific phosphotransferase system (PTS), IIABC
component [Streptococcus pyogenes str. Manfredo]
Length = 620
Score = 341 bits (874), Expect = 9e-92, Method: Composition-based stats.
Identities = 223/635 (35%), Positives = 346/635 (54%), Gaps = 33/635 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I+A VGGK NI ++ HCVTRLR LK++ K + V+ V++ GQYQ
Sbjct: 3 YQETAKAILAAVGGKTNIQRVTHCVTRLRLVLKNDEKVKDQQVKAISNVIGVMRKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLSAA 123
+++GN V + Y+ L + + D D + +G++ +R I ++G+ P++ L
Sbjct: 63 IILGNDVNNYYQAFLSLGHFDNQ---DEDHSSKAKGSILERLIETIAGVITPLIPALLGG 119
Query: 124 GMIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K V ++ LG+A D V +N GD + F+P+++A +AA RFK+ A I
Sbjct: 120 GMLKVVGILLPMLGLASADSQTVAFINFFGDAAYYFMPVMIAYSAAARFKVTPVLAATIA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L++P A KPL T FG P+ +SY S+V+P++ V+
Sbjct: 180 GILLHPAFVAMVAEGKPL---------------TLFGAPVT--PASYGSSVIPILMMVYL 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
IEK +++P V+K F+ P +LI+ LA +V+GP+ + IY +P
Sbjct: 223 MQYIEKWVNRLVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGQGLSNTMLAIYHVAP 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMR 361
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + +
Sbjct: 283 WLALAILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAFK 342
Query: 362 TKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
TK+++ RQ+++ A ISAL G+TEPA+YG+TL + P ISG L GA++ F ++
Sbjct: 343 TKQKQTRQVALAAGISALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAFIGFVNIASY 402
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ +P +I S+ + LIA A VL F LT + I E S
Sbjct: 403 TFVVPSIIGLPQYINPSSGANFTNALIAGAATIVLAFSLTWFMGID------EESPEQVS 456
Query: 481 LDSEKERVSAGI-TEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ ++ +V +G+ T+Q + +P+ GE++ L + PD F+S +G+G AI PS G V AP D
Sbjct: 457 VAADMSQVKSGLSTKQTLYAPMTGEMLFLSEVPDETFSSKLLGEGFAILPSEGVVYAPFD 516
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + FPT HA+ L G E+LIHVG+DTV L G+GF V G VK+GQ LL DI
Sbjct: 517 GEVITFFPTKHAVALKNTRGVEVLIHVGIDTVELKGQGFEQLVSVGDVVKRGQALLKMDI 576
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
D I GY + +P++VTN+A +Q+E++ + + ++
Sbjct: 577 DFITSKGYSLISPVVVTNSA--EQLEIIIQDDKKM 609
>gi|28377737|ref|NP_784629.1| beta-glucosides PTS, EIIBCA [Lactobacillus plantarum WCFS1]
gi|28270570|emb|CAD63474.1| beta-glucosides PTS, EIIBCA [Lactobacillus plantarum WCFS1]
Length = 620
Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats.
Identities = 223/624 (35%), Positives = 349/624 (55%), Gaps = 30/624 (4%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E+ I+ VGGK NI +VHC TRLRF LKDE+KAD D + G++ VVK GQYQ
Sbjct: 3 YKEMNDQIINGVGGKSNIESVVHCATRLRFVLKDEAKADDDLVRSIPGILQVVKKAGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+VIGN+V DVY + + + + +VD + + ++FD+ I+ ++G P + L+ AG
Sbjct: 63 LVIGNNVEDVYNELSDMLQL--DENVDHNQSKDKRSIFDKIISTITGSIAPAIPLLAGAG 120
Query: 125 MIK-GVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M K ++ + + + + Y +LN D + F+P + +AAK FK NQF +G
Sbjct: 121 MGKVLLLILTLSGLLTEKSQTYQMLNLIFDTGYFFMPAFIGFSAAKIFKTNQFLGAFMGL 180
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
V PN A A KP+ +F G+PI SY ST++ I +VW
Sbjct: 181 VTVNPNWVAMVAAGKPV---------------SFIGVPIQL--VSYSSTLITAILSVWLM 223
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
+ IEK KKI P ++KVF P +LIT PL F+V+GP+ + S + ++ +YD +
Sbjct: 224 SYIEKFVKKITPGMIKVFAEPMLIMLITAPLTFIVLGPIANLISMGIASISMFLYDNAGF 283
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAI--LELQKGPGVILVASIAICFAQAGALLNIMMR 361
+ +L AA+ LV G+H L P++I + Q +I V ++ +QA A L + ++
Sbjct: 284 IAIPLLAAAYPWLVSIGIHKALSPISIQLVATQGFDPIIRVVALCSNMSQAAASLAVGLK 343
Query: 362 TKEEKVRQLSIPAFISA-LFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
TK +++R L++ + ++A L G+TEPA++G+ L ++ P I GA+ G + F +K
Sbjct: 344 TKNKQLRALALSSTVTAYLGGITEPAMFGVNLKLKKPMYGAMIGGAVAGLFAGFMKMKAF 403
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ GL ++P ++ + + ++ ++A+ V F T LI F P ++ +
Sbjct: 404 IYVTPGLLSLPMWVSKTENYVVLAVATIVIAS-VATFIATWLIG----FEDPVSEEVMKQ 458
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
++ +V T+ + SP+ GE L + D FASG MGKG+A+ P+ G V+AP DG
Sbjct: 459 KQAQANKVVT--TKHSINSPVVGEARMLNEVNDETFASGVMGKGIAVIPTEGVVIAPTDG 516
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
V +F T+HAIGL D+ A+LLIHVG+DTV L G+ F V +G + GQ LL FD+D
Sbjct: 517 VASAVFDTSHAIGLHLDNDADLLIHVGIDTVELKGQYFETLVKKGERFHAGQELLRFDLD 576
Query: 601 TIKEAGYPVTTPIIVTNTANYKQI 624
IK+AGY T IIV NT ++ ++
Sbjct: 577 KIKQAGYDPTVMIIVLNTKDFLEV 600
>gi|21909940|ref|NP_664208.1| putative beta-glucoside permease IIABC component [Streptococcus
pyogenes MGAS315]
gi|28896363|ref|NP_802713.1| putative beta-glucoside permease IIABC component [Streptococcus
pyogenes SSI-1]
gi|21904128|gb|AAM79011.1| putative beta-glucoside permease IIABC component [Streptococcus
pyogenes MGAS315]
gi|28811614|dbj|BAC64546.1| putative beta-glucoside permease IIABC component [Streptococcus
pyogenes SSI-1]
Length = 620
Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats.
Identities = 225/635 (35%), Positives = 347/635 (54%), Gaps = 33/635 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I+A VGGK NI ++ HCVTRLR LK++ K + V+ V++ GQYQ
Sbjct: 3 YQETAKAILAAVGGKTNIQRVTHCVTRLRLVLKNDEKVKDQQVKAISNVIGVMRKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLSAA 123
+++GN V + Y+ L + + D D + +G++ +R I ++G+ P++ L
Sbjct: 63 IILGNDVNNYYQAFLSLGHFDNQ---DEDHSSKAKGSILERLIETIAGVITPLIPALLGG 119
Query: 124 GMIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K V ++ LG+A D V +N GD + F+P+++A +AA RFK+ A I
Sbjct: 120 GMLKVVGILLPMLGLASADSQTVAFINFFGDAAYYFMPVMIAYSAAARFKVTPVLAATIA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L++P A KPL TLF + + PAS Y S+V+P++ V+
Sbjct: 180 GILLHPAFVAMVAEGKPL-TLFGAS---------------VTPAS-YGSSVIPILMMVYL 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
IEK +++P V+K F+ P +LI+ LA +V+GP+ + IY +P
Sbjct: 223 MQYIEKWVNRLVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGQGLSNTMLAIYHVAP 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMR 361
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + +
Sbjct: 283 WLALAILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAFK 342
Query: 362 TKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
TK+++ RQ+++ A ISAL G+TEPA+YG+TL + P ISG L GA++ F ++
Sbjct: 343 TKQKQTRQVALAAGISALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAFIGFVNIASY 402
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ +P +I S I+ LIA A VL F LT + I E S
Sbjct: 403 TFVVPSIIGLPQYINPSGGANFINALIAGAATIVLAFSLTWFMGID------EESPKQVS 456
Query: 481 LDSEKERVSAGI-TEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ ++ +V +G+ T+Q + +P+ GE++ L + PD F+S +G+G AI PS G V AP D
Sbjct: 457 VAADMSQVKSGLSTKQTLYAPMTGEMLFLSEVPDETFSSKLLGEGFAILPSEGVVYAPFD 516
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + FPT HA+ L G E+LIHVG+DTV L G+GF V G VK+GQ LL DI
Sbjct: 517 GEVITFFPTKHAVALKNTRGVEVLIHVGIDTVELKGQGFEQLVSVGDVVKRGQALLKMDI 576
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
D I GY + +P++VTN+A +Q+E++ + + ++
Sbjct: 577 DFITSKGYSLISPVVVTNSA--EQLEIIIQDDKKM 609
>gi|50913845|ref|YP_059817.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS10394]
gi|50902919|gb|AAT86634.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS10394]
Length = 620
Score = 338 bits (868), Expect = 5e-91, Method: Composition-based stats.
Identities = 222/635 (34%), Positives = 345/635 (54%), Gaps = 33/635 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I+A VGGK NI ++ HCVTRLR LK++ K + V+ V++ GQYQ
Sbjct: 3 YQETAKAILAAVGGKTNIQRVTHCVTRLRLVLKNDEKVKDQQVKAISNVIGVMRKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLSAA 123
+++GN V + Y+ L + + D D + +G++ +R I ++G+ P++ L
Sbjct: 63 IILGNDVNNYYQAFLSLGHFDNQ---DEDHSSKAKGSILERLIETIAGVITPLIPALLGG 119
Query: 124 GMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K V ++ LG+A D A +N GD + F+P+++A +AA RFK+ A I
Sbjct: 120 GMLKVVGILLPMLGLASADSQAVAFINFFGDAAYYFMPVMIAYSAAARFKVTPVLAATIA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L++P A KPL FG P+ +SY S+V+P++ V+
Sbjct: 180 GILLHPAFVAMVAEGKPL---------------ALFGAPVT--PASYGSSVIPILMMVYL 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
IEK +++P V+K F+ P +LI+ LA +V+GP+ + IY +P
Sbjct: 223 MQYIEKWVNRLVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGQGLSNTMLTIYHVAP 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMR 361
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + +
Sbjct: 283 WLALAILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAFK 342
Query: 362 TKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
TK+++ RQ+++ A ISAL G+TEPA+YG+TL + P ISG L GA++ F ++
Sbjct: 343 TKQKQTRQVALAAGISALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAFIGFVNIASY 402
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ +P +I S+ + LIA A VL F LT + I E S
Sbjct: 403 TFVVPSIIGLPQYINPSSGANFTNALIAGAATIVLAFSLTWFMGID------EESPEQVS 456
Query: 481 LDSEKERVSAGI-TEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ ++ +V +G+ T+Q + +P+ GE++ L + PD F+S +G+G AI PS G V AP D
Sbjct: 457 VAADMSQVKSGLSTKQTLYAPMTGEMLFLSEVPDETFSSKLLGEGFAILPSEGVVYAPFD 516
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + FPT HA+ L G E+LIHVG+DTV L G+GF V G VK+GQ LL DI
Sbjct: 517 GEVITFFPTKHAVALKNTRGVEVLIHVGIDTVELKGQGFEQLVSVGDVVKRGQALLKMDI 576
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
D I GY + +P++VTN+A +Q+E++ + + ++
Sbjct: 577 DFITSKGYSLISPVVVTNSA--EQLEIIIQDDKKM 609
>gi|56808054|ref|ZP_00365852.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus pyogenes M49 591]
Length = 620
Score = 338 bits (866), Expect = 8e-91, Method: Composition-based stats.
Identities = 222/635 (34%), Positives = 344/635 (54%), Gaps = 33/635 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I+A VGGK NI ++ HCVTRLR LK++ K + V+ V++ GQYQ
Sbjct: 3 YQETAKAILAAVGGKTNIQRVTHCVTRLRLVLKNDEKVKDQQVKAISNVIGVMRKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLSAA 123
+++GN V + Y+ L + + D D + +G++ +R I ++G+ P++ L
Sbjct: 63 IILGNDVNNYYQAFLSLGHFDNQ---DEDHSSKAKGSILERLIETIAGVITPLIPALLGG 119
Query: 124 GMIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K V ++ LG+A D V +N GD + F+P+++A +AA RFK+ A I
Sbjct: 120 GMLKVVGILLPMLGLASADSQTVAFINFFGDAAYYFMPVMIAYSAAARFKVTPVLAATIA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L++P A KPL FG P+ +SY S+V+P++ V+
Sbjct: 180 GILLHPAFVAMVAEGKPL---------------ALFGAPVT--PASYGSSVIPILMMVYL 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
IEK +++P V+K F+ P +LI+ LA +V+GP+ + IY +P
Sbjct: 223 MQYIEKWVNRLVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGQGLSNTMLAIYHVAP 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMR 361
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + +
Sbjct: 283 WLALAILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAFK 342
Query: 362 TKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
TK+++ RQ+++ A ISAL G+TEPA+YG+TL + P ISG L GA++ F ++
Sbjct: 343 TKQKQTRQVALAAGISALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAFIGFVNIASY 402
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ +P +I S + LIA A VL F LT + I E S
Sbjct: 403 TFVVPSIIGLPQYINPSGGANFTNALIAGAATIVLTFSLTWFMGID------EESPEQVS 456
Query: 481 LDSEKERVSAGI-TEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ ++ +V +G+ T+Q + +P+ GE++ L + PD F+S +G+G AI PS G V AP D
Sbjct: 457 VAADMSQVKSGLSTKQTLYAPMTGEMLFLSEVPDETFSSKLLGEGFAILPSEGVVYAPFD 516
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + FPT HA+ L G E+LIHVG+DTV L G+GF V G VK+GQ LL DI
Sbjct: 517 GKVITFFPTKHAVALKNTRGVEVLIHVGIDTVELKGQGFEQLVSVGDVVKRGQALLKMDI 576
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
D I GY + +P++VTN+A +Q+E++ + + ++
Sbjct: 577 DFITSKGYSLISPVVVTNSA--EQLEIIIQDDKKI 609
>gi|118587597|ref|ZP_01545021.1| PTS system, beta-glucoside-specific enzyme II, ABC component
[Oenococcus oeni ATCC BAA-1163]
gi|118432048|gb|EAV38790.1| PTS system, beta-glucoside-specific enzyme II, ABC component
[Oenococcus oeni ATCC BAA-1163]
Length = 482
Score = 338 bits (866), Expect = 9e-91, Method: Composition-based stats.
Identities = 190/475 (40%), Positives = 280/475 (58%), Gaps = 25/475 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY ELA +I+ +VGGK+N+ ++HCVTRLRF LKDESKA+ + DGV+ V+ AGGQY
Sbjct: 2 DYKELATNILKNVGGKENVNDVIHCVTRLRFHLKDESKANDTAIKNMDGVMDVIHAGGQY 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADD-----------DAVEGNLFDRFIALVSGL 112
QVVIG V DVY+ ++KV G + V D D + LF RF+ L+S +
Sbjct: 62 QVVIGPQVDDVYDALVKVGGFQKKEEVSPDQGQNDEKKYGEKDQKQEGLFSRFLGLISSI 121
Query: 113 FQPMLGTLSAAGMIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRF 171
FQP+LG L A+GM K +V++ +G+ +KT G YV+L A GD LF F P+ L +AAKRF
Sbjct: 122 FQPVLGILMASGMFKALVSLFTVVGIMSKTSGTYVILYALGDALFYFFPVALGWSAAKRF 181
Query: 172 KMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLS 231
M + + +G LVYP + ++ T+ K LYTLFAG+ P+ TF G+P++ +Y +
Sbjct: 182 GMKELYGITLGGILVYPTLVSAVTS-KTLYTLFAGSAFSLPVRLTFLGIPVV--TQTYST 238
Query: 232 TVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVG 291
TV+P+I VW + I K K +P +++ F VPFFTLLI PL +VIGP+ D +
Sbjct: 239 TVIPIILIVWVASHIYKWLNKNLPAILRAFFVPFFTLLIAAPLGLIVIGPIAMVIQDSLS 298
Query: 292 ALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFA 350
L + + + G+ LG W +LVMFGLHW ++PL +++ Q G VI A A
Sbjct: 299 KLVIAMIGLNAGIAGLFLGTFWSILVMFGLHWAIIPLFAIDIAQHGYDVINPLIFAGALA 358
Query: 351 QAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGA 410
G++L + +RTK+ K R ++IPAFIS+ FG+ EP++YG+ +P + I + +S + GA
Sbjct: 359 SMGSVLGVFLRTKDPKERSIAIPAFISSFFGINEPSLYGVLIPRKKVMISSFLSAGIGGA 418
Query: 411 YLAFFDVKMQVMGGMGLFAIPSFIEASNS---------MTLIHFLIAIVANFVLG 456
F K+ G G +P FI ++ FL+A++++ G
Sbjct: 419 IAGFSGSKLYAFGASGPLGLPCFINPKGIDFGFIGLCLSGIVAFLLALISSMFFG 473
>gi|94993893|ref|YP_601991.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS10750]
gi|94547401|gb|ABF37447.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS10750]
Length = 620
Score = 337 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 221/635 (34%), Positives = 342/635 (53%), Gaps = 33/635 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I+A VGGK NI ++ HCVTRLR LK++ K + V+ V++ GQYQ
Sbjct: 3 YQETAKAILAAVGGKTNIQRVTHCVTRLRLVLKNDEKVKDQQVKAISNVIGVMRKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLSAA 123
+++GN V + Y+ L + + D D + +G++ +R I ++G+ P++ L
Sbjct: 63 IILGNDVNNYYQAFLSLGHFDNQ---DEDHSSKAKGSILERLIETIAGVITPLIPALLGG 119
Query: 124 GMIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K V ++ LG+A D V +N GD + F+P+++A +AA RFK+ A I
Sbjct: 120 GMLKVVGILLTMLGLASADSQTVAFINFFGDAAYYFMPVMIAYSAAARFKVTPILAATIA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L++P A KPL FG P+ +SY S+V+P++ V+
Sbjct: 180 GILLHPAFVAMVAEGKPL---------------ALFGAPVT--PASYGSSVIPILMMVYL 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
IEK +++P V+K F+ P +LI+ LA +V+GP+ + IY +P
Sbjct: 223 MQYIEKWVNRLVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGQGLSNTMLAIYHVAP 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMR 361
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + +
Sbjct: 283 WLALAILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAFK 342
Query: 362 TKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
TK+++ RQ+++ A ISAL G+TEPA+YG+TL + P ISG L GA++ F ++
Sbjct: 343 TKQKQTRQVALAAGISALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAFIGFVNIASY 402
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ +P +I S + LIA A VL F LT + I E S
Sbjct: 403 TFVVPSIIGLPQYINPSGGANFTNALIAGAATIVLAFSLTWFMGID------EESPEQVS 456
Query: 481 LDSEKERVSAGI-TEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ + +V +G+ T+Q + +P+ GE++ L + PD F+S +G+G AI PS G V AP D
Sbjct: 457 VAVDMSQVKSGLSTKQTLYAPMTGEMLFLSEVPDETFSSKLLGEGFAILPSEGVVYAPFD 516
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + FPT HA+ L G E+LIHVG+DTV L G+GF V G VK+GQ LL D
Sbjct: 517 GEVITFFPTKHAVALKNTRGVEVLIHVGIDTVELKGQGFEQLVSVGDVVKRGQALLKMDT 576
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
D I GY + +P++VTN+A +Q+E++ + + ++
Sbjct: 577 DFITSKGYSLISPVVVTNSA--EQLEIIIQDDKKM 609
>gi|116630309|ref|YP_815551.1| beta-glucosides PTS, EIIBCA [Lactobacillus gasseri ATCC 33323]
gi|116095891|gb|ABJ61043.1| beta-glucosides PTS, EIIBCA [Lactobacillus gasseri ATCC 33323]
Length = 624
Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats.
Identities = 220/624 (35%), Positives = 349/624 (55%), Gaps = 29/624 (4%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y ++ K I+A VGG+DNI +VHC TRLRF LKDESKAD + GV+ VVK GQYQ
Sbjct: 3 YEKMNKQIIAAVGGEDNIQSVVHCATRLRFVLKDESKADDAAAARIPGVLQVVKKAGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+VIG+ V DVY ++K+ I + + + + N+FD I++++G P + L+ AG
Sbjct: 63 LVIGSTVEDVYNDLVKMINIENDDNYKSTPKE-KKNIFDTVISVITGSIAPAIPLLAGAG 121
Query: 125 MIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M K ++ I+ G+ + Y +LN D + F+P + +AAK F +Q+ +G
Sbjct: 122 MGKVLLLILTISGLLSDKSQTYQILNLIFDTGYFFMPAFIGFSAAKVFNTDQYLGAFMGL 181
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
+P A A+KP+ F G+P+ Y ST++ I +VW
Sbjct: 182 VTEHPIWTAMVAAKKPV---------------EFLGMPVQL--IKYSSTLITAIISVWIM 224
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
+ I K KK P++VK+F+VP T+LIT PL FLVIGP+ + S+ +G + ++ + +
Sbjct: 225 SYIYKYVKKYTPNMVKIFMVPMLTMLITAPLIFLVIGPISNMISEGIGFISMWLFHNAGI 284
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAI--LELQKGPGVILVASIAICFAQAGALLNIMMR 361
+ +L AA+ LV G+H L P++I + Q +I V ++ +QA A L + M+
Sbjct: 285 VAIPILAAAYPWLVSIGIHKALSPISIQLVATQGFDPIIRVVALCSNMSQAAASLAVGMK 344
Query: 362 TKEEKVRQLSIPAFISA-LFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
+K ++++ L++ + +A L G+TEPA++G+ LP++ P I GA+ G +F +K
Sbjct: 345 SKNKELKSLALSSSATAYLGGITEPALFGVNLPLKKPMYGAMIGGAIAGVVASFMKIKAF 404
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ ++P ++ + + + ++ IVA+ V F T +I + SEK+
Sbjct: 405 IYVTPAFLSLPMWVSKTENFVIQAIIVIIVAS-VATFIATWVIGFDDPVDEKSEKN---- 459
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+KE + + SP+ G V L + D FASG MGKG+AI PS G++ AP DG
Sbjct: 460 --KQKEEFEQTHEKHDLKSPVKGTVEPLSEVNDETFASGVMGKGIAIVPSEGKIYAPDDG 517
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
V+ F T HAIGL D+ A++LIH+G+DTV ++G GF V +G VK GQ L+ FDID
Sbjct: 518 VVTATFDTGHAIGLHLDNDADVLIHIGIDTVQMNGDGFKQLVKKGDHVKAGQELVDFDID 577
Query: 601 TIKEAGYPVTTPIIVTNTANYKQI 624
IK+AGY T +IV N+ ++ ++
Sbjct: 578 KIKKAGYDPTVMMIVLNSKDFLEV 601
>gi|94989978|ref|YP_598078.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS10270]
gi|94543486|gb|ABF33534.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS10270]
Length = 620
Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats.
Identities = 221/635 (34%), Positives = 343/635 (54%), Gaps = 33/635 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I+A VGGK NI ++ HCVTRLR LK++ K + V+ V++ GQYQ
Sbjct: 3 YQETAKAILAAVGGKTNIQRVTHCVTRLRLVLKNDEKVKDQQVKAISNVIGVMRKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLSAA 123
+++GN V + Y+ L + + D D + +G++ +R I ++G+ P++ L
Sbjct: 63 IILGNDVNNYYQAFLSLGHFDNQ---DEDHSSKAKGSILERLIETIAGVITPLIPALLGG 119
Query: 124 GMIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K V ++ LG+A D V +N GD + F+P+++A +AA RFK+ A I
Sbjct: 120 GMLKVVGILLPMLGLASADSQTVAFINFFGDAAYYFMPVMIAYSAAARFKVTPVLAATIA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L++P A KPL FG P+ +SY S+V+P++ V+
Sbjct: 180 GILLHPAFVAMVAEGKPL---------------ALFGAPVT--PASYGSSVIPILMMVYL 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
IEK +++P V+K + P +LI+ LA +V+GP+ + IY +P
Sbjct: 223 MQYIEKWVNRLVPSVMKSSLQPTLIILISGFLALVVVGPLGVIIGQGLSNTMLAIYHVAP 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMR 361
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + +
Sbjct: 283 WLALAILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAFK 342
Query: 362 TKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
TK+++ RQ+++ A ISAL G+TEPA+YG+TL + P ISG L GA++ F ++
Sbjct: 343 TKQKQTRQVALAAGISALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAFIGFVNIASY 402
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ +P +I S + LIA A VL F LT + I E S
Sbjct: 403 TFVVPSIIGLPQYINPSGGANFTNALIAGAATIVLAFSLTWFMGID------EESPEQVS 456
Query: 481 LDSEKERVSAGI-TEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ ++ +V +G+ T+Q + +P+ GE++ L + PD F+S +G+G AI PS G V AP D
Sbjct: 457 VAADMSQVKSGLSTKQTLYAPMTGEMLFLSEVPDETFSSKLLGEGFAILPSEGVVYAPFD 516
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + FPT HA+ L G E+LIHVG+DTV L G+GF V G VK+GQ LL DI
Sbjct: 517 GKVITFFPTKHAVALKNTRGVEVLIHVGIDTVELKGQGFEQLVSVGDVVKRGQALLKMDI 576
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
D I GY + +P++VTN+A +Q+E++ + + ++
Sbjct: 577 DFITSKGYSLISPVVVTNSA--EQLEIIIQDDKKI 609
>gi|28379541|ref|NP_786433.1| beta-glucosides PTS, EIIBCA [Lactobacillus plantarum WCFS1]
gi|28272381|emb|CAD65296.1| beta-glucosides PTS, EIIBCA [Lactobacillus plantarum WCFS1]
Length = 615
Score = 335 bits (858), Expect = 9e-90, Method: Composition-based stats.
Identities = 215/625 (34%), Positives = 342/625 (54%), Gaps = 42/625 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D+ + A+ I+ +VGG+ NI L+HC TRLRF+L D +KAD + L DGV+ V AGGQ
Sbjct: 2 DFNDSAQAIILNVGGEKNINSLIHCSTRLRFTLNDFAKADLEKLKTVDGVLGAVIAGGQC 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QV+IGN V ++++ V + G S + + G + FI G+FQP++ ++
Sbjct: 62 QVIIGNDVVEMFDAVQALLGNSTQQNTARGPKQSWGKVVLDFII---GVFQPLVPAIAGG 118
Query: 124 GMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
G++K V+ ++A G ++ Y +LN G LP+++AIT A++ K+N A++
Sbjct: 119 GILKAVLMLLAMFGWISDKSQTYQILNLVGGAPLYLLPILVAITTAQKLKVNPLVAVSTV 178
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L+ P++ A T +T FGL + +Y S V P I V
Sbjct: 179 GVLILPDLVAMLTKG-----------------TTLFGLHVT--NVTYSSQVFPAILCVLF 219
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
A +E+ F K P +++F VP ++LIT P+ L +GP+ +VG F + F
Sbjct: 220 YALMERFFTKYSPKPIRIFFVPMMSMLITAPITLLFLGPL----GYVVGEGFVSVILFLN 275
Query: 303 VLYGIV----LGAAWQVLVMFGLHWGLVPLAILELQK--GPGVILVASIAICFAQAGALL 356
G V L +V G+H ++P + + L AS+A +++G
Sbjct: 276 THLGWVATALLAGVLPFMVATGMHKPMIPYVVSTFSTVGKESLYLPASLAHNISESGTCF 335
Query: 357 NIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFD 416
I +RTK+ K+R +++ A ISALFG+TEPA+YG+TL + I G + GAY+
Sbjct: 336 AITLRTKDTKLRAVALSAGISALFGITEPALYGVTLQHKRALISVITGGVIGGAYVGIAG 395
Query: 417 VKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKD 476
+ + G GL ++P F++ SN LIH LI +FV+ F + +I + D
Sbjct: 396 LSGFTIVGPGLASLPMFVDKSNPANLIHALIGFGISFVVSFVIGLII---------WKND 446
Query: 477 AAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVA 536
S S+ + + + + +P+AG++++L D PD VF+ G +G+G+A+EPS G ++A
Sbjct: 447 EEISSASDTGEATTTVVAEDLMAPVAGKILSLADVPDDVFSQGLIGQGIAVEPSEGSLIA 506
Query: 537 PADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLS 596
P DG I +++ T HA+G+ TD+GAELL H+G+DTV L+GK F +HV G V+ G+LL +
Sbjct: 507 PTDGTIEMVYETKHALGMRTDNGAELLFHIGLDTVQLNGKYFESHVQVGQHVQAGELLET 566
Query: 597 FDIDTIKEAGYPVTTPIIVTNTANY 621
FD+ IK AGY T ++VTN +Y
Sbjct: 567 FDVAKIKAAGYNPITMMVVTNQDSY 591
>gi|77408875|ref|ZP_00785601.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus agalactiae COH1]
gi|77172514|gb|EAO75657.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus agalactiae COH1]
Length = 622
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 214/631 (33%), Positives = 341/631 (54%), Gaps = 30/631 (4%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I+A VGG+ NI + HCVTRLR L ++ + + V+ V++ QYQ
Sbjct: 4 YQETAKAILAAVGGEKNIQHVTHCVTRLRLVLDNDEIVNDQVIKTIPNVIGVMRKNDQYQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y L + E + + ++F++ I ++G+ +P++ L G
Sbjct: 64 IILGNDVNNYYNAFLALGHF--ENTTREFSSQKKSSIFEKLIETIAGVIKPLIPALLGGG 121
Query: 125 MIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+K + ++ LG+ + V +N GD + F+P+++A +AA RFK+ A +G
Sbjct: 122 MLKVIGILLPMLGITSSSSQTVAFINFFGDAAYYFMPIMIAYSAASRFKVTPVLAATVGG 181
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++P KPL +FFG P+ +SY S+V+P++ V+
Sbjct: 182 ILLHPAFVTMVAEGKPL---------------SFFGAPVTL--ASYGSSVIPILIMVFLM 224
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IE+ KI+P V+K F+ P +LI+ LA +V+GP+ + + IY +P
Sbjct: 225 QYIERWINKIVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGKGLSSAMLSIYHVAPW 284
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + ++
Sbjct: 285 LALAILGAIMPLVVMTGMHWAFAPIFLAASVTTPDVLILPAMLASNLAQGAASLAVAVKA 344
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K+++ RQ++ A +SAL G+TEPA+YG+TL + P ISG L GAY+ ++
Sbjct: 345 KQKQTRQVAFAAGLSALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAYIGLVNIASYT 404
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
+ +P +I + +I +A +L F +T + I G +EK + +
Sbjct: 405 FVVPSIIGLPQYINPQGGNNFSNAVIVAIATIILTFIITWFLGIDE---GENEKSSINA- 460
Query: 482 DSEKERVSAGITE-QVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
E + +G+++ + + SP+ G V+ L PD F+S +G+G+AI PSVGEV AP DG
Sbjct: 461 -QEYTHIRSGLSKKETLYSPMVGNVLPLSKVPDETFSSKLLGEGLAITPSVGEVYAPFDG 519
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I LFPT HAI L D G E+LIH+G+DTV L+G+GF V G VK+GQLLL DID
Sbjct: 520 EIISLFPTKHAIALKDDKGVEVLIHIGIDTVELNGEGFEQLVKVGDFVKRGQLLLRMDID 579
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGE 631
I GY + +P++VTN+ + Q+E++ K E
Sbjct: 580 FISSKGYSLISPVVVTNSID--QLEIIVKDE 608
>gi|15902549|ref|NP_358099.1| Phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae R6]
gi|116515619|ref|YP_816005.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus pneumoniae D39]
gi|15458077|gb|AAK99309.1| Phosphotransferase system sugar-specific EII component
[Streptococcus pneumoniae R6]
gi|116076195|gb|ABJ53915.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus pneumoniae D39]
Length = 612
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 218/640 (34%), Positives = 353/640 (55%), Gaps = 38/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y + + I+ +GG+ N+ ++ HCVTRLR LKDE+ + D + K GV+ ++K GQYQ
Sbjct: 3 YKDKVQKILDVIGGEKNVNRVTHCVTRLRLELKDENLVNDDDVKKIPGVIGIMKKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y+ +K+ + V +GN+ +R I ++G P++ + G
Sbjct: 63 IILGNDVANYYKEFVKLGNFESDSVVQGH----KGNILERIIEYIAGSMTPIIPAMLGGG 118
Query: 125 MIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+K +V I+ LG+ ++D + L GD + FLPL+LA +A+++ K+ A+++
Sbjct: 119 MLKVLVIILPMLGILQSDSQTIAFLTFFGDAPYYFLPLLLAYSASQKLKVTSTLAMSVAG 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++PN + PL + FG+P+I +SY S+V+P+I VW
Sbjct: 179 VLLHPNFVQMVQSGNPL---------------SLFGVPVI--PASYGSSVVPIIIMVWLM 221
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IEK K+ P V K F+ P LL++ +A +V+GP+ + + L +YD +
Sbjct: 222 KYIEKMIAKLTPAVTKSFLQPTLVLLVSSCIALVVVGPIGVIVGEGLSNLVGQMYDVAGW 281
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L +LGA +VM G+HW P+ + P V IL A + AQ A + + +++
Sbjct: 282 LTLAILGAIMPFIVMTGMHWAFAPIFLAASIATPDVLILPAMLGSNLAQGAASMAVALKS 341
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K +Q++ A SAL G+TEPA+YG+TL + P I G L G + VK +
Sbjct: 342 KNNNTKQIAFAAGFSALLAGITEPALYGVTLKYKKPLYAAMIGGGLAGLFAGLTSVKAYL 401
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
L A+P FI + +++ LI V + V+ F L + G E++++ +L
Sbjct: 402 FAVPSLIALPQFIYSDVPSNIVNALIVAVISVVITFVLAYIF-------GIDEEESSSNL 454
Query: 482 DSEKERVSAGIT-EQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+ V AG++ ++++ SP++GE++ L D D F+ +G GVAI PS G+V AP DG
Sbjct: 455 E-----VKAGVSNKKMIFSPISGEIIPLSDVQDKTFSDKLIGDGVAIIPSEGKVYAPFDG 509
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I +FPT HAIGL +D+G ELLIH+G+DTV L G+GF +HV +G +V K QL+ D++
Sbjct: 510 KITNIFPTKHAIGLKSDEGVELLIHIGLDTVELKGQGFISHVEEGDRVFKNQLIFEMDLN 569
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGE-IQLGNQLL 639
IK GY TP+IVTNT ++ + VL + I+ +LL
Sbjct: 570 LIKTKGYETVTPVIVTNTNDFLDVLVLPNNQTIEHSKELL 609
>gi|58337965|ref|YP_194550.1| beta-glucoside permease [Lactobacillus acidophilus NCFM]
gi|58255282|gb|AAV43519.1| beta-glucoside permease [Lactobacillus acidophilus NCFM]
Length = 625
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 222/630 (35%), Positives = 353/630 (56%), Gaps = 30/630 (4%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y ++ ++I+A +GG++NI +VHC TRLRF LKDESKAD DG++ VVK GGQYQ
Sbjct: 3 YEKMNQEILAAIGGEENIQSVVHCATRLRFVLKDESKADDKKAEAIDGILQVVKKGGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+VIGN+V DVY+ ++ + I + D++ + NLFD I ++G P + L+ AG
Sbjct: 63 LVIGNNVEDVYDDLINMIHIE---TSDSNKPKKKQNLFDAIIGAITGSIAPAIPLLAGAG 119
Query: 125 MIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M K ++ I+ V + Y +LN D + F+P + +AAK F ++ IG
Sbjct: 120 MGKVLLLILTICHVLSDKSQTYQLLNLIFDTGYYFMPAYVGFSAAKIFNTDRMLGAFIGL 179
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
V+P+ T KP + F GLP+ P Y ST++ I +VW
Sbjct: 180 MTVHPSWVQIVTTNKPFH---------------FLGLPV--PLVQYSSTLITAILSVWIM 222
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
+ I K +KI P +VKVF+ P T+LIT PL FL+IGP+ +W S+ +G + ++ + V
Sbjct: 223 SYIYKFVRKITPGMVKVFMEPMLTMLITGPLVFLIIGPISNWISEGIGFIAMWLFRNAGV 282
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAI--LELQKGPGVILVASIAICFAQAGALLNIMMR 361
+ +L A + LV G+H L P++I + Q +I V ++ +QA A L + ++
Sbjct: 283 IAIPILAALYPWLVSIGIHKALSPISIQLVATQGFDPIIRVVALCSNMSQAAASLAVGLK 342
Query: 362 TKEEKVRQLSIPAFISA-LFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
TK +K++ L++ + ++A L G+TEPA++G+ L ++ P I GA+ G +F +K
Sbjct: 343 TKNKKLKSLALSSSVTAYLGGITEPALFGVNLRLKKPMYGAMIGGAIAGIVASFMKLKAF 402
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKD-AAE 479
+ ++P +I + + + ++ IVA+ V F T +I F P ++D
Sbjct: 403 IYVTPAFLSLPMWISKTENFVVQAIIVIIVAS-VATFIATWIIG----FDDPIDEDQVKN 457
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ EK+ + + +P+ G++ + D FASG MGKG+AI PS G++ AP D
Sbjct: 458 AKKEEKKNFDKDHKKHELHAPVKGQLEDISKVADPTFASGVMGKGIAIVPSEGKIFAPED 517
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
GV+ +F T+HAIGL + A++LIHVG+DTV + GKGF V +G KV GQ LL F+I
Sbjct: 518 GVVTAIFDTHHAIGLHLSNDADVLIHVGIDTVEMKGKGFKQLVQKGDKVTAGQELLDFNI 577
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAK 629
D IK+ GY T +IVTN+ ++ ++ + K
Sbjct: 578 DEIKKNGYDPTVVMIVTNSKDFLEVLTVLK 607
>gi|149010803|ref|ZP_01832174.1| PTS system, beta-glucosides-specific IIABC component [Streptococcus
pneumoniae SP19-BS75]
gi|147765284|gb|EDK72213.1| PTS system, beta-glucosides-specific IIABC component [Streptococcus
pneumoniae SP19-BS75]
Length = 612
Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats.
Identities = 217/640 (33%), Positives = 353/640 (55%), Gaps = 38/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y + + I+ +GG+ N+ ++ HCVTRLR LKDE+ + D + K GV+ ++K GQYQ
Sbjct: 3 YKDKVQKILDVIGGEKNVNRVTHCVTRLRLELKDENLVNDDDVKKIPGVIGIMKKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y+ +K+ + V +GN+ +R I ++G P++ + G
Sbjct: 63 IILGNDVANYYKEFVKLGNFESDSVVQGH----KGNILERIIEYIAGSMTPIIPAMLGGG 118
Query: 125 MIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+K +V I+ LG+ ++D + L GD + FLPL+LA +A+++ K+ A+++
Sbjct: 119 MLKVLVIILPMLGILQSDSQTIAFLTFFGDAPYYFLPLLLAYSASQKLKVTSTLAMSVAG 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++PN + PL + FG+P+I +SY S+V+P++ VW
Sbjct: 179 VLLHPNFVQMVQSGNPL---------------SLFGVPVI--PASYGSSVVPILIMVWLM 221
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IEK K+ P V K F+ P LL++ +A +V+GP+ + + L +YD +
Sbjct: 222 KYIEKMIAKLTPAVTKSFLQPTLVLLVSSCIALVVVGPIGVIVGEGLSNLVGQMYDVAGW 281
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L +LGA +VM G+HW P+ + P V IL A + AQ A + + +++
Sbjct: 282 LTLAILGAIMPFIVMTGMHWAFAPIFLAASIATPDVLILPAMLGSNLAQGAASMAVALKS 341
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K +Q++ A SAL G+TEPA+YG+TL + P I G L G + VK +
Sbjct: 342 KNNNTKQIAFAAGFSALLAGITEPALYGVTLKYKKPLYAAMIGGGLAGLFAGLTSVKAYL 401
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
L A+P FI + +++ LI V + V+ F L + G E++++ +L
Sbjct: 402 FAVPSLIALPQFIYSDVPSNIVNALIVAVISVVITFVLAYIF-------GIDEEESSSNL 454
Query: 482 DSEKERVSAGIT-EQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+ V AG++ ++++ SP++GE++ L D D F+ +G GVAI PS G+V AP DG
Sbjct: 455 E-----VKAGVSNKKMIFSPISGEIIPLSDVQDKTFSDKLIGDGVAIIPSEGKVYAPFDG 509
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I +FPT HAIGL +D+G ELLIH+G+DTV L G+GF +HV +G +V K QL+ D++
Sbjct: 510 KITNIFPTKHAIGLKSDEGVELLIHIGLDTVELKGQGFISHVEEGDRVFKNQLIFEMDLN 569
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGE-IQLGNQLL 639
IK GY TP+IVTNT ++ + VL + I+ +LL
Sbjct: 570 LIKTKGYETVTPVIVTNTNDFLDVLVLPNNQTIEHSKELL 609
>gi|150019654|ref|YP_001311908.1| PTS system, beta-glucoside-specific IIABC subunit [Clostridium
beijerinckii NCIMB 8052]
gi|149906119|gb|ABR36952.1| PTS system, beta-glucoside-specific IIABC subunit [Clostridium
beijerinckii NCIMB 8052]
Length = 611
Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats.
Identities = 222/652 (34%), Positives = 360/652 (55%), Gaps = 58/652 (8%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D +++ I+ HVGG DNI L HC+TRLRF L D+SK D + L K GV+ V+AG ++
Sbjct: 2 DQKDISNLIIKHVGGSDNIKDLYHCMTRLRFKLNDKSKFDVEELKKVPGVINTVQAGDEF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFD------RFIALVSGLFQPML 117
Q++IG V Y+ +LK G+ + G FD + ++ G+ P++
Sbjct: 62 QLIIGAEVDKYYKDLLK------HGAGKNVERKSIGGKFDFKSAPKAALNMIVGIMAPII 115
Query: 118 GTLSAAGMIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFT 177
+ A GM+K ++++ G+ Y +L+ D F FLP +A +AAK+F+ NQF
Sbjct: 116 PIIIAGGMVKVILSLCVLFGMGNNTQNYKILSLISDAPFYFLPFYIANSAAKKFETNQFM 175
Query: 178 ALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVI 237
A+AI +++PN L + +G I F LP+ A Y STV+P+I
Sbjct: 176 AMAIAGVMLHPNF---------LDLVVSGNGI------ALFDLPV--KAVKYGSTVIPII 218
Query: 238 AAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGI 297
VW + +EK ++IIP V+K + P L+IT PLA +VIGP+ ++ + + + +
Sbjct: 219 LVVWFMSYLEKFIERIIPQVLKTMLRPMLLLIITAPLALIVIGPLGAYMGNCIYVVIKTL 278
Query: 298 YDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-------GPGVILVASIAICFA 350
+ P L V+GA +LVM G+H + P AIL + + GPG++ A
Sbjct: 279 NENVPWLVPTVMGAFSPLLVMVGMHVSITPFAILSVSQFGYETFMGPGML-----GSNVA 333
Query: 351 QAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGA 410
Q GA L I ++ K+EK RQ++I A I+AL G+TEPA+YG+TL + + +SGA+ G
Sbjct: 334 QGGAALAIALKEKKEK-RQVAISAGITALSGITEPALYGVTLKYKRTLVCVMLSGAIAGL 392
Query: 411 YLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQL-IKIPNLF 469
Y V + G ++P FI A N +I+ +I + VL F LT + +K+
Sbjct: 393 YAGVTGVVRYAIASAGFLSLPVFIGA-NPRNIINAVITAIIALVLSFTLTYIFVKV---- 447
Query: 470 GGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEP 529
E + +D E ++ + ++ TS G+V+ LE+ D F+SGA+G G AI P
Sbjct: 448 ----ENSSESVVDKETDKAN-----EIFTSVACGKVIPLEEVKDEAFSSGALGYGAAIIP 498
Query: 530 SVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVK 589
+ G + +P +G + ++PT HAIG+ ++ G E+LIH+G+DTV L GKGF+ +V +G+ +
Sbjct: 499 TKGTIYSPVEGKVASIYPTGHAIGIISNSGKEILIHIGIDTVKLQGKGFSTYVEEGTIIH 558
Query: 590 KGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
G L+ D+D IKE GY + ++V N++ + I+V+ K E+ + ++ L++
Sbjct: 559 PGDRLVDIDLDFIKENGYDTSVIVVVPNSSK-EDIKVIEKDELSINDEFLQI 609
>gi|148998250|ref|ZP_01825719.1| PTS system, beta-glucosides-specific IIABC component [Streptococcus
pneumoniae SP11-BS70]
gi|147755893|gb|EDK62937.1| PTS system, beta-glucosides-specific IIABC component [Streptococcus
pneumoniae SP11-BS70]
Length = 612
Score = 332 bits (850), Expect = 6e-89, Method: Composition-based stats.
Identities = 216/640 (33%), Positives = 354/640 (55%), Gaps = 38/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y + + I+ +GG+ N+ ++ HCVTRLR LKDE+ + D + K GV+ ++K GQYQ
Sbjct: 3 YKDTVQKILDVIGGEKNVNRVTHCVTRLRLELKDENLVNDDDVKKIPGVIGIMKKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y+ +K+ G +D+ + +GN+ +R I ++G P++ + G
Sbjct: 63 IILGNDVANYYKEFVKL----GNFELDSVNQGYKGNILERIIEYIAGSMTPIIPAMLGGG 118
Query: 125 MIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+K +V I+ LG+ ++D + L GD + FLPL+LA +A+++ K+ A+++
Sbjct: 119 MLKVLVIILPMLGILQSDSQTIAFLTFFGDAPYYFLPLLLAYSASQKLKVTSTLAMSVAG 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++PN + PL + FG+P+ +SY S+V+P++ VW
Sbjct: 179 VLLHPNFVQMVQSGNPL---------------SLFGVPVT--PASYGSSVVPILIMVWLM 221
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IEK K+ P V K F+ P LL++ +A +V+GP+ + + L +Y +
Sbjct: 222 KYIEKMIAKLTPAVTKSFLQPTLVLLVSSCIALVVVGPIGVIVGEGLSNLVGQMYGVAGW 281
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L +LGA +VM G+HW P+ + P V IL A + AQ A + + +++
Sbjct: 282 LTLAILGAIMPFIVMTGMHWAFAPIFLAASIATPDVLILPAMLGSNLAQGAASMAVALKS 341
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K +Q++ A SAL G+TEPA+YG+TL + P I G L G + VK +
Sbjct: 342 KNNNTKQIAFAAGFSALLAGITEPAVYGVTLKYKKPLYAAMIGGGLAGLFAGLTSVKAYL 401
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
L A+P FI + +++ LI V + V+ F L + G E++++ +L
Sbjct: 402 FAVPSLIALPQFIYSDAPSNIVNALIVAVISVVITFVLAYIF-------GIDEEESSSNL 454
Query: 482 DSEKERVSAGIT-EQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+ V AG++ ++++ SP++GE++ L D D F+ +G GVAI PS G+V AP DG
Sbjct: 455 E-----VEAGVSNKKMIFSPISGEIIPLSDVQDKTFSDKLIGDGVAIIPSEGKVYAPFDG 509
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I +FPT HAIGL +D+G ELLIH+G+DTV L G+GF +HV +G +V K QL+ D++
Sbjct: 510 KITNIFPTKHAIGLKSDEGVELLIHIGLDTVELKGQGFISHVEEGDRVFKNQLIFEMDLN 569
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGE-IQLGNQLL 639
IK GY TP+IVTNT ++ + VL + I+ +LL
Sbjct: 570 LIKTKGYETVTPVIVTNTNDFLDVLVLPNNQTIEHSKELL 609
>gi|37524587|ref|NP_927931.1| beta-glucoside-specific phosphotransferase system-dependent
permease [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36784011|emb|CAE12878.1| beta-glucoside-specific phosphotransferase system-dependent
permease [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 480
Score = 332 bits (850), Expect = 7e-89, Method: Composition-based stats.
Identities = 204/491 (41%), Positives = 290/491 (59%), Gaps = 40/491 (8%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y LAK IV+ +GGK+NI+ LVHC TRLRF LKD S A+++ L + G++TVV++GGQYQ
Sbjct: 3 YESLAKKIVSAIGGKENISSLVHCATRLRFKLKDSSLANSELLKQTKGIITVVESGGQYQ 62
Query: 65 VVIGNHVPDVYE------------TVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGL 112
VVIG+HV DVY+ T +K + S +G + D+ + D I ++S +
Sbjct: 63 VVIGSHVGDVYDDINRYLQDNTEKTEVKQSVTSPQG-IKQDNAKGLKRILDVTIDIISSI 121
Query: 113 FQPMLGTLSAAGMIKGVVAIMAALGVAKTD-GAYVVLNAAGDGLFQFLPLILAITAAKRF 171
F P+LG L AAG+IKG++A+ D G Y +L A GD + F+P++L TA KRF
Sbjct: 122 FTPLLGVLVAAGLIKGILALSDVFNWMSIDSGTYKILYATGDAMLYFMPILLGYTAGKRF 181
Query: 172 KMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLS 231
N F + IG AL YP + +F L TP + F G+PI F +Y S
Sbjct: 182 GGNPFITMVIGAALTYPTMTEAFK-------LSQTTP---AVHLNFLGIPISF--INYSS 229
Query: 232 TVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVG 291
TV+P+I + W +EK F VK+F PF LLITVPL FLVIGPV + S+ +
Sbjct: 230 TVIPIILSAWFSCLLEKKFNSWFHSSVKLFATPFLCLLITVPLTFLVIGPVATELSNGLA 289
Query: 292 ALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAI--LELQKGPGVILVASIAICF 349
A + Y +PV+ G+++GA WQV V+FGLHWGL+P+ I + QK + + AI F
Sbjct: 290 AGYLFFYQLNPVIAGLLMGALWQVCVIFGLHWGLIPIMINNMMTQKKDMLSPLLQPAI-F 348
Query: 350 AQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTG 409
QAGA L + +RT+++ ++ LS A IS+LFG+TEPAIYG+TLP++ PFI+ CI GAL G
Sbjct: 349 GQAGATLGVFLRTRDKNMKTLSGTALISSLFGITEPAIYGVTLPLKRPFIIGCIGGALGG 408
Query: 410 AYLAFFDVKMQVMGGMGLFAIPSFIEASNS---------MTLIHFLIAIVANFVLGFGLT 460
A + F+ +GGMG+FA SFI + +L F+ + +A ++ FGL
Sbjct: 409 AIVGFYSGTAYNVGGMGIFAFTSFISPTGIDSAFWSVILGSLGSFIFSCIATYL--FGLP 466
Query: 461 QLIKIPNLFGG 471
+K+ + G
Sbjct: 467 SEVKVSPITSG 477
>gi|58337838|ref|YP_194423.1| beta-glucoside-specific enzyme II [Lactobacillus acidophilus NCFM]
gi|58255155|gb|AAV43392.1| beta-glucoside-specific enzyme II [Lactobacillus acidophilus NCFM]
Length = 560
Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats.
Identities = 202/580 (34%), Positives = 332/580 (57%), Gaps = 32/580 (5%)
Query: 67 IGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMI 126
+G V DVY + + IS + +D + + N+ + + ++SG+F P++ + AG++
Sbjct: 1 MGGRVTDVYNAFVPLVHISNNST--SDTNKAKENIISKLLDILSGIFVPIIHAIIGAGLL 58
Query: 127 KGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFAL 185
KG++ + V+ Y +L+ D F F+P++LA ++AK+FK N++ A+AI L
Sbjct: 59 KGILIFLNFYHLVSPATSTYKLLSVFSDSAFYFMPILLAYSSAKKFKTNKYVAVAIAGIL 118
Query: 186 VYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGAK 245
V+P + + + + FFG+P F +++Y ++VLP+I VW +
Sbjct: 119 VHPELISMMSKSASV---------------KFFGIP--FTSATYSTSVLPIILGVWVMSY 161
Query: 246 IEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVLY 305
IE+G KIIP +++ +VP FTLLIT P+ ++GP+ + D +G +Y V+
Sbjct: 162 IERGLNKIIPKILRTVLVPLFTLLITAPIILGILGPIGTIVGDAIGQGTVQLYLHYGVIA 221
Query: 306 GIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLNIMMRTKE 364
GI++GAA+ LV+ G+H G P+ + L K G ++ +A A+AGA + ++TK
Sbjct: 222 GILVGAAYPFLVIMGMHVGFTPVMVQSLSKYGVDYMMGIFVASNSAEAGATTAVWLKTKN 281
Query: 365 EKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGG 424
+++++++ + ++A+ GVTEPA++G+T ++ P I I GA+ G F V Q G
Sbjct: 282 KQLKEIAGSSALNAIIGVTEPALFGVTSKLKKPLIAVSIGGAVGGGIAGLFKVAAQGAGT 341
Query: 425 MGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLI---KIPNLFGGPSEKDAAESL 481
+ IP F T I F+I+ + ++V+ F L +I IPN P + S+
Sbjct: 342 GPIAGIPLFF----GKTFIWFIISCLVSYVVSFILAYVIGFEDIPN----PEDLSQKNSM 393
Query: 482 DSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGV 541
D+ ++ V+ + Q V P+ G V+ L + D VF+S MG G AI P+ ++ AP DGV
Sbjct: 394 DNHEKIVTTVVANQSVADPVNGNVIPLSEVKDNVFSSKMMGDGAAIVPNDNKIYAPFDGV 453
Query: 542 IRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDT 601
+ L+F T HAIGL + DG ELLIHVG+DTV L GK F +HV++ KVKKG LLL FD +
Sbjct: 454 VELVFETKHAIGLKSYDGCELLIHVGLDTVELKGKHFISHVIKDQKVKKGDLLLEFDREA 513
Query: 602 IKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
I + GY T P+IVTN+ +++ I K ++Q G +LL+L
Sbjct: 514 ISKEGYDTTIPVIVTNSKDFENITKTKKKQLQHGEELLKL 553
>gi|148992313|ref|ZP_01822036.1| PTS system, beta-glucosides-specific IIABC component [Streptococcus
pneumoniae SP9-BS68]
gi|147928939|gb|EDK79951.1| PTS system, beta-glucosides-specific IIABC component [Streptococcus
pneumoniae SP9-BS68]
Length = 612
Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats.
Identities = 215/640 (33%), Positives = 351/640 (54%), Gaps = 38/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y + + I+ +GG+ N+ ++ HCVTRLR LKDE+ + D + K GV+ ++K GQYQ
Sbjct: 3 YKDKVQKILDVIGGEKNVNRVTHCVTRLRLELKDENLVNDDDMKKIPGVIGIMKKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y+ +K+ + V +GN+ +R I ++G P++ + G
Sbjct: 63 IILGNDVANYYKEFVKLGNFESDSVVQGH----KGNILERIIEYIAGSMTPIIPAMLGGG 118
Query: 125 MIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+K +V I+ LG+ ++D + L GD + FLPL+LA +A+++ K+ A+++
Sbjct: 119 MLKVLVIILPMLGILQSDSQTIAFLTFFGDAPYYFLPLLLAYSASQKLKVTSTLAMSVAG 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++PN + PL + FG+P+ +SY S+V+P++ VW
Sbjct: 179 VLLHPNFVQMVQSGNPL---------------SLFGVPVT--PASYGSSVVPILIMVWLM 221
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IEK K+ P V K F+ P LL++ +A +V+GP+ + + L +Y +
Sbjct: 222 KYIEKMIAKLTPAVTKSFLQPTLVLLVSSCIALVVVGPIGVIVGEGLSNLVGQMYGVAGW 281
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L +LGA +VM G+HW P+ + P V IL A + AQ A + + +++
Sbjct: 282 LTLAILGAIMPFIVMTGMHWAFAPIFLAASIATPDVLILPAMLGSNLAQGAASMAVALKS 341
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K +Q++ A SAL G+TEPA+YG+TL + P I G L G + VK +
Sbjct: 342 KNNNTKQIAFAAGFSALLAGITEPALYGVTLKYKKPLYAAMIGGGLAGLFAGLTSVKAYL 401
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
L A+P FI + +++ LI V + V+ F L + G E++++ +L
Sbjct: 402 FAVPSLIALPQFIYSDVPSNIVNALIVAVISVVITFVLAYIF-------GIDEEESSSNL 454
Query: 482 DSEKERVSAGIT-EQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+ V AG++ ++++ SP++GE++ L D D F+ +G GVAI PS G+V AP DG
Sbjct: 455 E-----VKAGVSNKKMIFSPISGEIIPLSDVQDKTFSDKLIGDGVAIIPSEGKVYAPFDG 509
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I +FPT HAIGL +D+G ELLIH+G+DTV L G+GF +HV +G +V K QL+ D++
Sbjct: 510 KITNIFPTKHAIGLKSDEGVELLIHIGLDTVELKGQGFISHVEEGDRVFKNQLIFEMDLN 569
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGE-IQLGNQLL 639
IK GY TP+IVTNT ++ + VL + I+ +LL
Sbjct: 570 LIKTKGYETVTPVIVTNTNDFLDVLVLPNNQTIEHSKELL 609
>gi|148988940|ref|ZP_01820340.1| PTS system, beta-glucosides-specific IIABC component [Streptococcus
pneumoniae SP6-BS73]
gi|147925437|gb|EDK76514.1| PTS system, beta-glucosides-specific IIABC component [Streptococcus
pneumoniae SP6-BS73]
Length = 612
Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats.
Identities = 215/640 (33%), Positives = 351/640 (54%), Gaps = 38/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y + + I+ +GG+ N+ ++ HCVTRLR LKDE+ + D + K GV+ ++K GQYQ
Sbjct: 3 YKDKVQKILDVIGGEKNVNRVTHCVTRLRLELKDENLVNDDDVKKIPGVIGIMKKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y+ +K+ + V +GN+ +R I ++G P++ + G
Sbjct: 63 IILGNDVANYYKEFVKLGNFESDSVVQGH----KGNILERIIEYIAGSMTPIIPAMLGGG 118
Query: 125 MIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+K +V I+ LG+ ++D + L GD + FLPL+LA +A+++ K+ A+++
Sbjct: 119 MLKVLVIILPMLGILQSDSQTIAFLTFFGDAPYYFLPLLLAYSASQKLKVTSTLAMSVAG 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++PN + PL + FG+P+ +SY S+V+P++ VW
Sbjct: 179 VLLHPNFVQMVQSGNPL---------------SLFGVPVT--PASYGSSVVPILIMVWLM 221
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IEK K+ P V K F+ P LL++ +A +V+GP+ + + L +Y +
Sbjct: 222 KYIEKMIAKLTPAVTKSFLQPTLVLLVSSCIALVVVGPIGVIVGEGLSNLVGQMYGVAGW 281
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L +LGA +VM G+HW P+ + P V IL A + AQ A + + +++
Sbjct: 282 LTLAILGAIMPFIVMTGMHWAFAPIFLAASIATPDVLILPAMLGSNLAQGAASMAVALKS 341
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K +Q++ A SAL G+TEPA+YG+TL + P I G L G + VK +
Sbjct: 342 KNNNTKQIAFAAGFSALLAGITEPALYGVTLKYKKPLYAAMIGGGLAGLFAGLTSVKAYL 401
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
L A+P FI + +++ LI V + V+ F L + G E++++ +L
Sbjct: 402 FAVPSLIALPQFIYSDAPSNIVNALIVAVISVVITFVLAYIF-------GIDEEESSSNL 454
Query: 482 DSEKERVSAGIT-EQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+ V AG++ ++++ SP++GE++ L D D F+ +G GVAI PS G+V AP DG
Sbjct: 455 E-----VEAGVSNKKMIFSPISGEIIPLSDVQDKTFSDKLIGDGVAIIPSEGKVYAPFDG 509
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I +FPT HAIGL +D+G ELLIH+G+DTV L G+GF +HV +G +V K QL+ D++
Sbjct: 510 KITNIFPTKHAIGLKSDEGVELLIHIGLDTVELKGQGFISHVEEGDRVFKNQLIFEMDLN 569
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGE-IQLGNQLL 639
IK GY TP+IVTNT ++ + VL + I+ +LL
Sbjct: 570 LIKTKGYETVTPVIVTNTNDFLDVLVLPNNQTIEHSKELL 609
>gi|148983956|ref|ZP_01817275.1| PTS system, beta-glucosides-specific IIABC component [Streptococcus
pneumoniae SP3-BS71]
gi|147924103|gb|EDK75215.1| PTS system, beta-glucosides-specific IIABC component [Streptococcus
pneumoniae SP3-BS71]
Length = 612
Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats.
Identities = 214/640 (33%), Positives = 352/640 (55%), Gaps = 38/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y + + I+ +GG+ N+ ++ HCVTRLR LKDE+ + D + K GV+ ++K GQYQ
Sbjct: 3 YKDTVQKILDVIGGEKNVNRVTHCVTRLRLELKDENLVNDDDVKKIPGVIGIMKKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y+ +K+ + V +GN+ +R I ++G P++ + G
Sbjct: 63 IILGNDVANYYKEFVKLGNFESDSVVQGH----KGNILERIIEYIAGSMTPIIPAMLGGG 118
Query: 125 MIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+K +V I+ LG+ ++D + L GD + FLPL+LA +A+++ K+ A+++
Sbjct: 119 MLKVLVIILPMLGILQSDSQTIAFLTFFGDVPYYFLPLLLAYSASQKLKVTSTLAMSVAG 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++PN + PL + FG+P+ +SY S+V+P++ VW
Sbjct: 179 VLLHPNFVQMVQSGNPL---------------SLFGVPVT--PASYGSSVVPILIMVWLM 221
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IEK K+ P V K F+ P LL++ +A +V+GP+ + + L +Y +
Sbjct: 222 KYIEKMIAKLTPAVTKSFLQPTLVLLVSSCIALVVVGPIGVIVGEGLSNLVGQMYGVAGW 281
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L +LGA +VM G+HW P+ ++ P V IL A + AQ A + + +++
Sbjct: 282 LTLAILGAIMPFIVMTGMHWAFAPIFLVASIATPDVLILPAMLGSNLAQGAASMAVALKS 341
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K +Q++ A SAL G+TEPA+YG+TL + P I G L G + VK +
Sbjct: 342 KNNNTKQIAFAAGFSALLAGITEPAVYGVTLKYKKPLYAAMIGGGLAGLFAGLTSVKAYL 401
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
L A+P FI + +++ LI V + V+ F L + G E++++ +L
Sbjct: 402 FAVPSLIALPQFIYSDVPSNIVNALIVAVISVVITFVLAYIF-------GIDEEESSSNL 454
Query: 482 DSEKERVSAGIT-EQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+ V AG++ ++++ SP++GE++ L D D F+ +G GVAI PS G+V AP DG
Sbjct: 455 E-----VKAGVSNKKMIFSPISGEIIPLSDVQDKTFSDKLIGDGVAIIPSEGKVYAPFDG 509
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I +FPT HAIGL +D+G ELLIH+G+DTV L G+GF +HV +G +V K QL+ D++
Sbjct: 510 KITNIFPTKHAIGLKSDEGVELLIHIGLDTVELKGQGFISHVEEGDRVFKNQLIFEMDLN 569
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGE-IQLGNQLL 639
IK GY TP+IVTNT ++ + +L + I+ +LL
Sbjct: 570 LIKTKGYETVTPVIVTNTNDFLDVLILPNNQTIEHSKELL 609
>gi|149005688|ref|ZP_01829427.1| PTS system, beta-glucosides-specific IIABC component [Streptococcus
pneumoniae SP18-BS74]
gi|147762628|gb|EDK69588.1| PTS system, beta-glucosides-specific IIABC component [Streptococcus
pneumoniae SP18-BS74]
Length = 612
Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats.
Identities = 215/640 (33%), Positives = 350/640 (54%), Gaps = 38/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y + + I+ +GG+ N+ ++ HCVTRLR LKDE+ + D + K GV+ ++K GQYQ
Sbjct: 3 YKDTVQKILDVIGGEKNVNRVTHCVTRLRLELKDENLVNDDDVKKIPGVIGIMKKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y+ +K+ + V +GN+ +R I ++G P++ + G
Sbjct: 63 IILGNDVANYYKEFVKLGNFESDSVVQGH----KGNILERIIEYIAGSMTPIIPAMLGGG 118
Query: 125 MIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+K +V I+ LG+ ++D + L GD + FLPL+LA +A+++ K+ A+++
Sbjct: 119 MLKVLVIILPMLGILQSDSQTIAFLTFFGDAPYYFLPLLLAYSASQKLKVTSTLAMSVAG 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++PN + PL + FG P+ +SY S+V+P++ VW
Sbjct: 179 VLLHPNFVQMVQSGNPL---------------SLFGAPVT--PASYGSSVVPILIMVWLM 221
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IEK K+ P V K F+ P LL++ +A +V+GP+ + + L +Y +
Sbjct: 222 KYIEKMIAKLTPAVTKSFLQPTLVLLVSSCIALVVVGPIGVIVGEGLSNLVGQMYGVAGW 281
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L +LGA +VM G+HW P+ + P V IL A + AQ A + + +++
Sbjct: 282 LTLAILGAIMPFIVMTGMHWAFAPIFLAASIATPDVLILPAMLGSNLAQGAASMAVALKS 341
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K +Q++ A SAL G+TEPA+YG+TL + P I G L G + VK +
Sbjct: 342 KNNNTKQIAFAAGFSALLAGITEPALYGVTLKYKKPLYAAMIGGGLAGLFAGLTSVKAYL 401
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
L A+P FI + +++ LI V + V+ F L + G E++++ +L
Sbjct: 402 FAVPSLIALPQFIYSDVPSNIVNALIVAVISVVITFVLAYIF-------GIDEEESSSNL 454
Query: 482 DSEKERVSAGIT-EQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+ V AG++ ++++ SP++GE++ L D D F+ +G GVAI PS G+V AP DG
Sbjct: 455 E-----VKAGVSNKKMIFSPISGEIIPLSDVQDKTFSDKLIGDGVAIIPSEGKVYAPFDG 509
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I +FPT HAIGL +D+G ELLIH+G+DTV L G+GF +HV +G +V K QL+ D++
Sbjct: 510 KITNIFPTKHAIGLKSDEGVELLIHIGLDTVELKGQGFISHVEEGDRVFKNQLIFEMDLN 569
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGE-IQLGNQLL 639
IK GY TP+IVTNT ++ + VL + I+ +LL
Sbjct: 570 LIKTKGYETVTPVIVTNTNDFLDVLVLPNNQTIEHSKELL 609
>gi|19745690|ref|NP_606826.1| beta-glucoside permease IIABC component [Streptococcus pyogenes
MGAS8232]
gi|19747824|gb|AAL97325.1| beta-glucoside permease IIABC component [Streptococcus pyogenes
MGAS8232]
Length = 620
Score = 328 bits (840), Expect = 9e-88, Method: Composition-based stats.
Identities = 222/635 (34%), Positives = 344/635 (54%), Gaps = 33/635 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I+A VGGK NI ++ HCVTRLR LK++ K + V+ V++ GQYQ
Sbjct: 3 YQETAKAILATVGGKTNIQRVTHCVTRLRLVLKNDEKVKDQQVKAISNVIGVMRKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLSAA 123
+++GN V + Y+ L + + D D + +G++ +R I ++G+ P++ L
Sbjct: 63 IILGNDVNNYYQAFLSLGHFDNQ---DEDHSSKAKGSILERLIETIAGVITPLIPALLGG 119
Query: 124 GMIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K V ++ LG+A D VV +N GD + F+P+++A +AA RFK+ A I
Sbjct: 120 GMLKVVGILLPMLGLASADSQTVVFINFFGDAAYYFMPVMIAYSAAARFKVTPVLAATIA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L++P A KPL FG P+ +SY S+V+P++ V+
Sbjct: 180 GILLHPAFVAMVAEGKPL---------------ALFGAPVT--PASYGSSVIPILMMVYL 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
IEK +++P V+K F+ P +LI+ L +V+GP+ + IY +P
Sbjct: 223 MQYIEKWGNRLVPSVMKSFLQPTLIILISGFLVLVVVGPLGVIIGQGLSNTMLTIYHVAP 282
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMR 361
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + +
Sbjct: 283 WLALAILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAFK 342
Query: 362 TKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
TK+++ RQ+++ A ISAL G+TEPA+YG+TL + P ISG L GA++ F ++
Sbjct: 343 TKQKQTRQVALAAGISALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAFIGFVNIASY 402
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ +P +I S + LIA A VL F LT + I E S
Sbjct: 403 TFVVPSIIGLPQYINPSGGANFTNALIAGAATIVLAFSLTWFMGID------EESPEQVS 456
Query: 481 LDSEKERVSAGI-TEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ ++ +V +G+ T+Q + +P+ GE++ L + PD F+S +G+G AI PS G V AP D
Sbjct: 457 VAADMSQVKSGLSTKQTLYAPMTGEMLFLSEVPDETFSSKLLGEGFAILPSEGVVYAPFD 516
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G + FPT HA+ L G E+LIHVG+DTV L G+GF V G VK+GQ LL DI
Sbjct: 517 GEVITFFPTKHAVALKNTRGVEVLIHVGIDTVELKGQGFEQLVSVGDVVKRGQALLKMDI 576
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
D I GY + +P++VTN+A +Q+E++ + + ++
Sbjct: 577 DFITSKGYSLISPVVVTNSA--EQLEIIIQDDKKM 609
>gi|145296827|ref|YP_001139648.1| hypothetical protein cgR_2729 [Corynebacterium glutamicum R]
gi|27463665|gb|AAO15901.1|AF508972_2 PTS enzyme II BCA protein [Corynebacterium glutamicum]
gi|140846747|dbj|BAF55746.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 618
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 226/652 (34%), Positives = 351/652 (53%), Gaps = 53/652 (8%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D++ L D+V +GG DN+ + HC TRLRF +KD KAD K GV+T + +GGQ+
Sbjct: 6 DFSPLVADVVTALGGADNVRSVTHCATRLRFKIKDSDKADIAKAGKISGVITAINSGGQH 65
Query: 64 QVVIGNHVPDVYETVLKVAGI------SGEGSVDADDDAVEGNLFDRFIALVSGLFQPML 117
QVVIGN VP Y+ ++ V G+ G+ VD D + + N ++FI L+S LF P++
Sbjct: 66 QVVIGNDVPLAYQALMDVPGMRAKGIKDGDAEVDDDGGSEDKNWLNKFIDLISALFSPIV 125
Query: 118 GTLSAAGMIKGVVAIMAALGVAKTDGA-YVVLNAAGDGLFQFLPLILAITAAKRFKMNQF 176
L+ G+ K + + +G+ + + + + NA DGLF FLP LAITAAKRFK+NQF
Sbjct: 126 WALAGIGLGKAGLTLATTVGILDAESSTHTIFNAMFDGLFYFLPFFLAITAAKRFKVNQF 185
Query: 177 TALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPV 236
ALAI AL++P + A E TF GLP+ + S V
Sbjct: 186 IALAIVAALLHPTMEAMVGTEG----------------VTFLGLPLTMMSYSSSVIP--V 227
Query: 237 IAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTG 296
+ +VW +++ +K++P V+ F P +L+ VPL IGPV A++ +
Sbjct: 228 VVSVWLAGYLQRWLEKVLPGAVRNFFTPLIVVLVMVPLVLFTIGPVTIGAANALSNGIGF 287
Query: 297 IYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGAL 355
+++ P L G ++GA WQV VMFGLHWGLVP+ I ++ +G ++ +A F Q GA
Sbjct: 288 LFETVPWLAGGLMGAFWQVFVMFGLHWGLVPVMINDIATQGFSYMMAPLMAAIFGQVGAA 347
Query: 356 LNIMMRTKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAF 414
L + +R+K +V++++ P +S F GVTEP IYG+ LP++ PF ++G + G
Sbjct: 348 LAVWIRSKNAEVKKVAGPGVLSGFFAGVTEPIIYGVNLPLKYPFYAGVVAGGIGGI---- 403
Query: 415 FDVKMQVMGGMGLFAIPSFIEASNSMTLIHF---LIAIVANFVLGFGLTQLIKIPNLFGG 471
+ F PS + + ++++ F LI A +LGF T + +F
Sbjct: 404 --IIAVGGNAFDAFVFPSVMAFAATLSVGSFVAQLIGSSAALILGFVFTVV-----MFRK 456
Query: 472 PSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSV 531
D E+ T V + +G V L + PD VF+SGAMG G I P
Sbjct: 457 EQNVDKQET-----------DTTPNVAAAASGTYVPLAEIPDKVFSSGAMGDGFGIVPEN 505
Query: 532 GEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKG 591
GE+V+P +G + + + HA G+ D+G E+L+HVG+DTV + G+GF V +G VK G
Sbjct: 506 GEIVSPVEGQLIAVQKSGHAYGIRGDNGIEVLVHVGIDTVKMAGEGFEILVARGDHVKVG 565
Query: 592 QLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVL-AKGEIQLGNQLLELK 642
Q L D++ + EAG+ TT +IVTN+ + ++ +G + G+ ++ ++
Sbjct: 566 QPLAKVDLNAVAEAGFDPTTAVIVTNSKKLEGLKFTDVEGHVGAGDVVMRME 617
>gi|146319144|ref|YP_001198856.1| Phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus suis 05ZYH33]
gi|146321348|ref|YP_001201059.1| Phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus suis 98HAH33]
gi|145689950|gb|ABP90456.1| Phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus suis 05ZYH33]
gi|145692154|gb|ABP92659.1| Phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus suis 98HAH33]
Length = 613
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 214/640 (33%), Positives = 344/640 (53%), Gaps = 37/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y A I+ VGG+ N+ + HCVTRLR LKDE+ + + GV+ ++K GQYQ
Sbjct: 3 YKNTALAILGAVGGEKNVLRATHCVTRLRLELKDENIVSDERVKSISGVIGIMKKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y+ + G+ D+ + N+ ++ I ++G P++ + G
Sbjct: 63 IILGNDVANYYKEFTAL----GKFDSDSVQQLKKANVLEQVIEYIAGSMTPLIPAMLGGG 118
Query: 125 MIKGVVAIMAALGVAKTDGAYVVLNAA-GDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
MIK +V ++ LG+ K D + A GD + F+P+ LA +A+++ K+ A+++
Sbjct: 119 MIKVLVIVLPMLGLLKADSQSISFLAFFGDAPYHFMPIFLAYSASQKLKVTPALAMSVAG 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++PN ++ PL+ F G P+ +SY S+V+P++ VW
Sbjct: 179 ILLHPNFVQMVSSGDPLH---------------FLGAPVT--PASYGSSVIPILIMVWLM 221
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IE F K+ P V K F+ P LL++ +A +++GP+ + + L ++ +
Sbjct: 222 KYIEAVFNKVTPAVTKSFLQPTLVLLVSGFIALVLVGPLGVIVGEGLSQLVEQMHGVAGW 281
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L VLGA +VM G+HW P+ + P V IL A + AQ A + + ++
Sbjct: 282 LTLAVLGAIMPFIVMTGMHWAFAPIFLAASIATPDVLILPAMLGSNLAQGAASIAVAFKS 341
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K +Q++ A SALF GVTEPA+YG+TL + P I G L G ++ VK +
Sbjct: 342 KNSNTKQIAFAAGFSALFAGVTEPALYGVTLKYKKPLYAAMIGGGLAGLFVGLTGVKAYL 401
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
L A+P FI + + + + +IA + ++ F L F G E+ + +L
Sbjct: 402 FAVPSLIALPQFIYSEAASNITNAMIAAAISIIVTFILA-------YFLGIDEETSTVNL 454
Query: 482 DSEKERVSAGITEQV-VTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
E+V+ GI+ + V SPL+G+++ LE DA F+ +G+GVAI P G+V AP DG
Sbjct: 455 ----EKVAPGISSRKNVFSPLSGQILPLEKVNDATFSKKMLGEGVAIIPKDGKVYAPFDG 510
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
+ LFPT HAIGL +D+G ELLIH G++TV L G+GF +HV G KV+KGQL+L D++
Sbjct: 511 TVTSLFPTKHAIGLTSDEGVELLIHFGLETVELKGRGFVSHVSDGEKVEKGQLMLEVDVE 570
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLA-KGEIQLGNQLL 639
+ GY + TP++VTNT Y + +L+ K E+ + LL
Sbjct: 571 MLVAEGYDIVTPVVVTNTQEYLDVLLLSTKEEVNYADDLL 610
>gi|22536954|ref|NP_687805.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus agalactiae 2603V/R]
gi|25010865|ref|NP_735260.1| hypothetical protein gbs0810 [Streptococcus agalactiae NEM316]
gi|76788558|ref|YP_329537.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
agalactiae A909]
gi|77406909|ref|ZP_00783932.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus agalactiae H36B]
gi|77411358|ref|ZP_00787706.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus agalactiae CJB111]
gi|22533807|gb|AAM99677.1|AE014227_21 PTS system, beta-glucosides-specific IIABC components
[Streptococcus agalactiae 2603V/R]
gi|23095244|emb|CAD46454.1| Unknown [Streptococcus agalactiae NEM316]
gi|76563615|gb|ABA46199.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
agalactiae A909]
gi|77162618|gb|EAO73581.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus agalactiae CJB111]
gi|77174475|gb|EAO77321.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus agalactiae H36B]
Length = 622
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 213/629 (33%), Positives = 339/629 (53%), Gaps = 30/629 (4%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I+A VGG+ NI + HCVTRLR L ++ + + V+ V++ QYQ
Sbjct: 4 YQETAKAILAAVGGEKNIQHVTHCVTRLRLVLDNDEIVNDQVIKTIPNVIGVMRKNDQYQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y L + E + + ++ ++ I ++G+ P++ L G
Sbjct: 64 IILGNDVNNYYNAFLALGHF--ENTTREFSSQKKSSILEKLIETIAGVITPLIPALLGGG 121
Query: 125 MIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+K + ++ LG+A + V +N GD + F+P+++A +AA RFK+ A +G
Sbjct: 122 MLKVIGILLPMLGIASSSSQTVAFINFFGDAAYYFMPIMIAYSAASRFKVTPVLAATVGG 181
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++P KPL + FG P+ +SY S+V+P++ V+
Sbjct: 182 ILLHPAFVTMVAEGKPL---------------SLFGAPVTL--ASYGSSVIPILIMVFLM 224
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IE+ KI+P V+K F+ P +LI+ LA +V+GP+ + + IY +P
Sbjct: 225 QYIERWINKIVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGKGLSSAMLSIYHVAPW 284
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + ++
Sbjct: 285 LALSILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAVKA 344
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K+++ RQ++ A +SAL G+TEPA+YG+TL + P ISG L GAY+ ++
Sbjct: 345 KQKQTRQVAFAAGLSALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAYIGLVNIASYT 404
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
+ +P +I + +IA +A +L F +T + I G +EK + +
Sbjct: 405 FVVPSIIGLPQYINPQGGNNFSNAVIAAIATIILTFIITWFLGIDE---GENEKSSINA- 460
Query: 482 DSEKERVSAGITE-QVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
E + +G+++ + + SP+ G V+ L PD F+S +G+G+AI PSVGEV AP DG
Sbjct: 461 -QEHTHIRSGLSKKETLYSPMVGNVLPLSKVPDETFSSKLLGEGLAITPSVGEVYAPFDG 519
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I LFPT HAI L D G E+LIH+G+DTV L+G+GF V G VK+GQLLL DID
Sbjct: 520 EIISLFPTKHAIALKDDKGVEVLIHIGIDTVELNGEGFEQLVKVGDFVKRGQLLLRMDID 579
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAK 629
I GY + +P++VTN+ + Q+E++ K
Sbjct: 580 FISSKGYSLISPVVVTNSID--QLEIIVK 606
>gi|81096529|ref|ZP_00874870.1| Sugar-specific permease, EIIA 1 domain:PTS system,
beta-glucoside-specific IIABC component [Streptococcus
suis 89/1591]
gi|80977409|gb|EAP40951.1| Sugar-specific permease, EIIA 1 domain:PTS system,
beta-glucoside-specific IIABC component [Streptococcus
suis 89/1591]
Length = 613
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 214/640 (33%), Positives = 344/640 (53%), Gaps = 37/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y A I+ VGG+ N+ + HCVTRLR LKDE+ + + GV+ ++K GQYQ
Sbjct: 3 YKNTALAILEAVGGEKNVLRATHCVTRLRLELKDENIVSDERVKSISGVLGIMKKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y+ + G+ D+ + N+ ++ I ++G P++ + G
Sbjct: 63 IILGNDVANYYKEFTAL----GKFDSDSVQQVKKANVLEQVIEYIAGSMTPLIPAMLGGG 118
Query: 125 MIKGVVAIMAALGVAKTDGAYVVLNAA-GDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
MIK +V ++ LG+ K D + A GD + F+P+ LA +A+++ K+ A+++
Sbjct: 119 MIKVLVIVLPMLGLLKADSQSISFLAFFGDAPYHFMPIFLAYSASQKLKVTPALAMSVAG 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++PN ++ PL+ F G P+ +SY S+V+P++ VW
Sbjct: 179 ILLHPNFVQMVSSGDPLH---------------FLGAPVT--PASYGSSVIPILIMVWLM 221
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IE F K+ P + K F+ P LL++ +A +++GP+ + + L ++ +
Sbjct: 222 KYIEAVFNKVTPAITKSFLQPTLVLLVSGFIALVLVGPLGVIVGEGLSQLVEQMHGVAGW 281
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L VLGA +VM G+HW P+ + P V IL A + AQ A + + ++
Sbjct: 282 LTLAVLGAIMPFIVMTGMHWAFAPIFLAASIATPDVLILPAMLGSNLAQGAASMAVAFKS 341
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K +Q++ A SALF GVTEPA+YG+TL + P I G L G ++ VK +
Sbjct: 342 KNSNTKQIAFAAGFSALFAGVTEPALYGVTLKYKKPLYAAMIGGGLAGLFVGLTGVKAYL 401
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
L A+P FI + + + + +IA + ++ F L F G E+ + +L
Sbjct: 402 FAVPSLIALPQFIYSEAASNITNAMIAAAISIIVTFILA-------YFLGIDEETSTVNL 454
Query: 482 DSEKERVSAGITEQV-VTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
E+V+ GI+ + V SPL+G+++ LE DA F+ +G+GVAI P G+V AP DG
Sbjct: 455 ----EKVAPGISSRKNVFSPLSGQILPLEKVNDATFSKKMLGEGVAIIPKDGKVYAPFDG 510
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I LFPT HAIGL +D+G ELLIH G++TV L G+GF +HV G KV+KGQL+L D++
Sbjct: 511 AITSLFPTKHAIGLTSDEGVELLIHFGLETVELKGRGFVSHVSDGEKVEKGQLMLEVDVE 570
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLA-KGEIQLGNQLL 639
+ GY + TP++VTNT Y + +L+ K E+ + LL
Sbjct: 571 MLVAEGYDIVTPVVVTNTQEYLDVLLLSTKEEVNYADDLL 610
>gi|15900487|ref|NP_345091.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus pneumoniae TIGR4]
gi|111657678|ref|ZP_01408407.1| hypothetical protein SpneT_02001134 [Streptococcus pneumoniae
TIGR4]
gi|14972051|gb|AAK74731.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus pneumoniae TIGR4]
Length = 612
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 213/640 (33%), Positives = 349/640 (54%), Gaps = 38/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y + + I+ +GG+ N+ ++ HCVTRLR LKDE+ + D + K GV+ ++K GQYQ
Sbjct: 3 YKDTVQKILDVIGGEKNVNRVTHCVTRLRLELKDENLVNDDDVKKIPGVIGIMKKNGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y+ +K+ + V +GN+ +R I ++G P++ + G
Sbjct: 63 IILGNDVANYYKEFVKLGNFESDSVVQGH----KGNILERIIEYIAGSMTPIIPAMLGGG 118
Query: 125 MIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+K +V I+ LG+ ++D + L GD + FLPL+LA +A+++ K+ A+++
Sbjct: 119 MLKVLVIILPMLGILQSDSQTIAFLTFFGDAPYYFLPLLLAYSASQKLKVTSTLAMSVAG 178
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++PN + PL + FG P+ +SY S+V+P++ VW
Sbjct: 179 VLLHPNFVQMVQSGNPL---------------SLFGAPVT--PASYGSSVVPILIMVWLM 221
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IEK K+ + K F+ P LL++ +A +V+GP+ + + L +Y +
Sbjct: 222 KYIEKIIAKLTLAITKSFLQPTLVLLVSSCIALVVVGPIGVIVGEGLSNLVGQMYGVAGW 281
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L +LGA +VM G+HW P+ + P V IL A + AQ A + + +++
Sbjct: 282 LTLAILGAIMPFIVMTGMHWAFAPIFLAASIATPDVLILPAMLGSNLAQGAASMAVALKS 341
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K +Q++ A SAL G+TEPA+YG+TL + P I G L G + VK +
Sbjct: 342 KNNNTKQIAFAAGFSALLAGITEPALYGVTLKYKKPLYAAMIGGGLAGLFAGLTSVKAYL 401
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
L A+P FI + +++ LI V + V+ F L + G E++++ +L
Sbjct: 402 FAVPSLIALPQFIYSDVPSNIVNALIVAVISVVITFVLAYIF-------GIDEEESSSNL 454
Query: 482 DSEKERVSAGIT-EQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
+ V AG++ ++++ SP++GE++ L D D F+ +G GVAI PS G+V AP DG
Sbjct: 455 E-----VEAGVSNKKMIFSPISGEIIPLSDVQDKTFSDKLIGDGVAIIPSEGKVYAPFDG 509
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I +FPT HAIGL +D+G ELLIH+G+DTV L G+GF +HV +G +V K QL+ D++
Sbjct: 510 KITNIFPTKHAIGLKSDEGVELLIHIGLDTVELKGQGFISHVEEGDRVFKNQLIFEMDLN 569
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGE-IQLGNQLL 639
IK GY TP+IVTNT ++ + VL + I+ +LL
Sbjct: 570 LIKTKGYETVTPVIVTNTNDFLDVLVLPNNQTIEHSKELL 609
>gi|24380203|ref|NP_722158.1| putative PTS system, sucrose-specific IIABC component
[Streptococcus mutans UA159]
gi|131505|sp|P12655|PTS3B_STRMU PTS system sucrose-specific EIIBCA component (EIIBCA-Scr) (EII-Scr)
[Includes: Sucrose-specific phosphotransferase enzyme
IIB component (PTS system sucrose-specific EIIB
component); Sucrose permease IIC component (PTS system
sucrose-specific EIIC component); Sucrose-specific
phosphotransferase enzyme IIA component (PTS system
sucrose-specific EIIA component)]
gi|24378209|gb|AAN59464.1|AE015011_3 putative PTS system, sucrose-specific IIABC component
[Streptococcus mutans UA159]
gi|153801|gb|AAA26971.1| enzyme scr-II [Streptococcus mutans]
Length = 664
Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats.
Identities = 241/669 (36%), Positives = 350/669 (52%), Gaps = 35/669 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY+++A +++ VG KDN+ HC TRLR LKD+SK D L K V K GQY
Sbjct: 2 DYSKVASEVITAVG-KDNLVAAAHCATRLRLVLKDDSKVDQKALDKNADVKGTFKTDGQY 60
Query: 64 QVVIG-NHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALV---SGLFQPMLGT 119
QV+IG V VY+ ++K G++ + D A G F+ +AL+ S +F P++
Sbjct: 61 QVIIGPGDVNFVYDEIIKQTGLTEVSTDDLKKIAASGKKFNPIMALIKLLSDIFVPIIPA 120
Query: 120 LSAAGMIKGVVAIMAALGVAKTDG---AYVVLNAAGDGL-------FQFLPLILAITAAK 169
L A G++ + + + G+ T + ++ + D + F FLP+++ I+AAK
Sbjct: 121 LVAGGLLMALNNFLTSEGLFGTKSLVQQFPIIKGSSDMIQLMSAAPFWFLPILVGISAAK 180
Query: 170 RFKMNQFTALAIGFALVYPNIA--ASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPAS 227
RF NQF +IG +V P A A P+ A T F FGL + +
Sbjct: 181 RFGANQFLGASIGMIMVAPGAANIIGLAANAPISK--AATIGAYTGFWNIFGLHVT--QA 236
Query: 228 SYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWAS 287
SY V+PV+ AVW + +EK F K +P V P +++IT L F+VIGPVM S
Sbjct: 237 SYTYQVIPVLVAVWLLSILEKFFHKRLPSAVDFTFTPLLSVIITGFLTFIVIGPVMKEVS 296
Query: 288 DLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLA---ILELQKGPG---VIL 341
D + +YD + L V GA + +VM GLH + I Q G G I
Sbjct: 297 DWLTNGIVWLYDTTGFLGMGVFGALYSPVVMTGLHQSFPAIETQLISAFQNGTGHGDFIF 356
Query: 342 VASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMT 401
V + AQ A I TK++K++ LS + +SAL G+TEPA++G+ L R PF
Sbjct: 357 VTASMANVAQGAATFAIYFLTKDKKMKGLSSSSGVSALLGITEPALFGVNLKYRFPFFCA 416
Query: 402 CISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQ 461
I A A V +G G S +S ++ LI+ F + +G +
Sbjct: 417 LIGSASAAAIAGLLQVVAVSLGSAGFLGFLSIKASSIPFYVVCELISFAIAFAVTYGYGK 476
Query: 462 LIKIPNLFGGPSEKDAAESLDSE--KERVSAG----ITEQVVTSPLAGEVVALEDTPDAV 515
K ++F + + A E +E SA +T++V+ +PLAGE V L D V
Sbjct: 477 -TKAVDVFAAEAAVEEAIEEVQEIPEEAASAANKAQVTDEVLAAPLAGEAVELTSVNDPV 535
Query: 516 FASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDG 575
F+S AMGKG+AI+PS V AP DG +++ F T HA G+ +D+GAE+LIH+G+DTV+++G
Sbjct: 536 FSSEAMGKGIAIKPSGNTVYAPVDGTVQIAFDTGHAYGIKSDNGAEILIHIGIDTVSMEG 595
Query: 576 KGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLA-KGEIQL 634
KGF V K+KKG +L +FD D I EAG TT IVTNTA+Y +E LA G + +
Sbjct: 596 KGFEQKVQADQKIKKGDVLGTFDSDKIAEAGLDNTTMFIVTNTADYASVETLASSGTVAV 655
Query: 635 GNQLLELKK 643
G+ LLE+KK
Sbjct: 656 GDSLLEVKK 664
>gi|126697957|ref|YP_001086854.1| PTS system, beta-glucoside-specific IIabc component [Clostridium
difficile 630]
gi|115249394|emb|CAJ67209.1| PTS system, beta-glucoside-specific IIabc component [Clostridium
difficile 630]
Length = 620
Score = 322 bits (824), Expect = 7e-86, Method: Composition-based stats.
Identities = 222/649 (34%), Positives = 347/649 (53%), Gaps = 43/649 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y + A DI+ VGG NI L HC TRLRF L D SK + D L K GV+++V G Q+
Sbjct: 2 NYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDALKKVQGVMSIVN-GAQF 60
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QVVIGN V DVY+ +LKV + S ++ + NL RFI + +FQP++ ++ A
Sbjct: 61 QVVIGNSVVDVYDEILKVCPLDTNDSTVKTEEKI--NLGTRFIEFIINIFQPLIFAIAGA 118
Query: 124 GMIKGVVAIMAALGVAKTDGA-YVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
G++K ++ ++A + K+D Y +L A D F FLPL++A+T A K N+ A+A
Sbjct: 119 GILKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVAVTTANVLKCNRLVAIA-- 176
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
A+ Y + A+ TA LF T P +Y + V P I V
Sbjct: 177 -AVGYLLLPATTTALSEGVELFGFT----------------IPNIAYNAQVFPAILCVSF 219
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
A +EK F K P ++ F VP +L ITVP+ ++GP+ + + +Y+
Sbjct: 220 LATMEKIFNKYSPKPIRTFFVPMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYNKMG 279
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK--GPGVILVASIAICFAQAGALLNIMM 360
L +L +V G+H L+P +I + K + + +S+A +++GA + +
Sbjct: 280 FLVVGLLAGFLPFMVATGMHKALIPYSINTIGKLGYEALYMTSSLAHNISESGACFAVAL 339
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
RTK+E ++Q ++ A ISAL G+TEPA+YGITL + + S A++G +L F VK
Sbjct: 340 RTKDETLKQTALSAGISALMGITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFAVKGF 399
Query: 421 VMGGMGLFAIPSFIEASNSMTLIH----FLIAIVANFVLGFGLTQLIKIPNLFGGPSEKD 476
V+ G GL ++ FI+ +N LI F+IAI+ +F++ L + +
Sbjct: 400 VIVGPGLASMSMFIDPNNGNNLIFASIGFVIAILGSFII-----------TLIIWKEDTN 448
Query: 477 AAESL--DSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEV 534
ES D +E + ++ +P+ G+V+ L D +FAS +G GVAI P+ G +
Sbjct: 449 TVESSIGDVVEEELEEEKEVNILVTPVEGKVIDLSKVNDELFASKTLGDGVAIIPTNGNL 508
Query: 535 VAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLL 594
AP D + +LF T HAIGL T +GAE+LIH+G++TV+++G GF V VK+G LL
Sbjct: 509 YAPCDSEVVMLFETKHAIGLRTKNGAEILIHIGINTVSMNGDGFKTFVKTSDNVKEGDLL 568
Query: 595 LSFDIDTIKEAGYPVTTPIIVTNTANYK-QIEVLAKGEIQLGNQLLELK 642
+ FD+D I A T I+ N A+Y ++ + G ++ G+ L ++K
Sbjct: 569 IQFDLDKISHANLDSTVMIVNNNGADYAYKVLNQSYGNVKKGSILFDVK 617
>gi|139437221|ref|ZP_01771381.1| Hypothetical protein COLAER_00360 [Collinsella aerofaciens ATCC
25986]
gi|133776868|gb|EBA40688.1| Hypothetical protein COLAER_00360 [Collinsella aerofaciens ATCC
25986]
Length = 482
Score = 321 bits (823), Expect = 9e-86, Method: Composition-based stats.
Identities = 184/461 (39%), Positives = 289/461 (62%), Gaps = 9/461 (1%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MA+ Y +LA+ I+ +VGG +N+ + HC+TR+RF LKDES+A+T + GV+ V++A
Sbjct: 1 MAEKYDDLARSILENVGGAENVASVAHCITRVRFKLKDESRANTAKIETLKGVIQVIQAN 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL 120
GQYQVV+GN V DVY+ V++ SG S D D+ + + I L+SG+FQP+LG L
Sbjct: 61 GQYQVVVGNIVEDVYDAVMEAGNFSGGASAD-DEPQGDKTVASVIIDLISGIFQPILGPL 119
Query: 121 SAAGMIKGVVAIMAALGVA-KTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
+AAG++KG++A++ A DG Y +L DG F FLP+ LA +AA++F+MN+FT +
Sbjct: 120 AAAGIMKGLLALITYFVPAFANDGLYTLLYTVADGFFYFLPVALAFSAARKFRMNEFTGV 179
Query: 180 AIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAA 239
AIG AL+YP + A T+ + L ++ G ++T G+PII P S Y+S+V+PV+
Sbjct: 180 AIGVALLYPTMVA-LTSGEALGSIDLGVAGTFSWYATALGVPIIMPVSGYVSSVIPVLLM 238
Query: 240 VWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD 299
VW G+ +E+ K +P +K+F+VP T+ +++ L +LVIGPV + ++L+ A F+ I+
Sbjct: 239 VWFGSILERWLKSWMPTALKMFLVPLATMTVSIVLGYLVIGPVATLITNLLSAAFSFIFQ 298
Query: 300 F---SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGAL 355
VL ++G W LV FG HW L+P++I+ L G +L A+I FA +
Sbjct: 299 LPVVGSVLGSALVGGLWMCLVSFGFHWSLIPISIMNLNTLGHDSVLAATIGHGFALGAVI 358
Query: 356 LNIMMRTKEEKVRQLSIPAFISA-LFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAF 414
+ +R K+E+ R +++ A ISA FGVTEP IYGI LP + F++ C+S A+ GA +
Sbjct: 359 FAMYLRNKDERFRGIALLAMISAFFFGVTEPGIYGIALPNKRAFVVACLSSAVGGAIVGM 418
Query: 415 FDVKMQVMGGMGLFAIPSFIEAS-NSMTLIHFLIAIVANFV 454
M + GG+G+F + +FI+ + + H + AI+A+ V
Sbjct: 419 TGALMYISGGLGVFNLLNFIDGTPGGAGISHMIFAIIASLV 459
>gi|15893714|ref|NP_347063.1| Fusion: PTS system, beta-glucosides specific IIABC component
[Clostridium acetobutylicum ATCC 824]
gi|7025341|gb|AAF35839.1|AF205034_2 ScrA [Clostridium acetobutylicum]
gi|15023277|gb|AAK78403.1|AE007557_2 Fusion: PTS system, beta-glucosides specific IIABC component
[Clostridium acetobutylicum ATCC 824]
Length = 627
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 217/644 (33%), Positives = 358/644 (55%), Gaps = 39/644 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY + AKDI+ +GG+ N+ HC TRLR LK+E +A T + K DGV V + GQY
Sbjct: 2 DYNKTAKDILKLLGGEKNVMSAAHCATRLRLVLKNEKEARTKEIEKLDGVKGVFSSSGQY 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLS 121
Q++IG V VY+ ++ GIS D A++ NLF+RF ++S +F P++ +
Sbjct: 62 QIIIGQGSVNKVYKAFVEGTGISESSLSDTKKAAMKNMNLFERFARMLSNIFVPIIPAIV 121
Query: 122 AAGMIKGVVAIMAALGVAKT-DGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALA 180
A+G++ G++ ++ A + + G YV+LN + FQFLP+I+A +AA+ FK N + A A
Sbjct: 122 ASGLLMGLLGMLDAFHLVNSKSGLYVILNMFSNAAFQFLPMIIAFSAAREFKTNPYLAAA 181
Query: 181 IGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAV 240
+G +++P++ ++T G I+ I FGL I Y TVLP++ +V
Sbjct: 182 LGAIMIHPDLQNAWTL---------GEGIKHTI--NIFGLNI--GMVGYQGTVLPILISV 228
Query: 241 WAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDF 300
W + IEKG +KI+P+ + + + PF TL+IT A +VIGP + D + +Y+
Sbjct: 229 WVMSYIEKGLRKIVPEALDILLTPFLTLMITGFFAMVVIGPGGRFVGDEISLGLQTLYNT 288
Query: 301 SPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-----ILVASIAICFAQAGAL 355
+ G++ G + ++V+ G+H + L P + + + S+A AQ GA
Sbjct: 289 TGFFSGVLFGGLYSLIVITGIHHSFHAIEA-GLLANPAIHKNFLLPIWSMA-NVAQGGAA 346
Query: 356 LNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFF 415
L + +T+++K++ ++ PA S L G+TEPAI+G+ L PFI + GA+ G Y+ F
Sbjct: 347 LAVYFKTRDKKMKSIAAPASFSCLLGITEPAIFGVNLRYTKPFIAGALGGAIGGGYIVFT 406
Query: 416 DVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEK 475
V M +G G+ I + S ++++IA++ F F + ++ G E+
Sbjct: 407 KVAMTAVGVTGIPGIAIVKQGS----FLNYIIAMILAFGGAFIIAMVL-------GIKEE 455
Query: 476 DAAESLDSEKERVSAGITE-QVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEV 534
E L+ E + E + V SP+ G+VV L++ PD FA G +G G+ ++P GEV
Sbjct: 456 ITEEDLNKETVNKDIKVEEVESVVSPVNGKVVLLKNVPDKTFAEGLIGDGIGVDPEDGEV 515
Query: 535 VAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLL 594
V+P DG + +F T HAI + + +G E+LIH+G+DTV ++G GF + + G +VKKG L
Sbjct: 516 VSPIDGTVVHVFETKHAIAMKSKNGVEMLIHIGIDTVKMEGNGFKSFINDGEEVKKGDKL 575
Query: 595 LSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQL 638
+ FD+D +KE +PI++T N++ + + +I G QL
Sbjct: 576 IQFDLDLVKEKA---VSPIVLTIVTNHEDMGFVNSEKID-GKQL 615
>gi|77958041|ref|ZP_00822082.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Yersinia
bercovieri ATCC 43970]
Length = 587
Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats.
Identities = 209/584 (35%), Positives = 328/584 (56%), Gaps = 29/584 (4%)
Query: 49 KRDGVVTVVKAGGQYQVVIGNHVPDVYETVLKVAGISGE-GSVDADDDAVEGNLFDRFIA 107
K DGV+ V++ GQYQVVIGN V VY ++ GI G+ S DA +GN+ R
Sbjct: 3 KLDGVILAVESNGQYQVVIGNDVTKVYNVIIDEFGIKGDTSSADAHPTERKGNIVGRVFN 62
Query: 108 LVSGLFQPMLGTLSAAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAIT 166
+S + P++ L+ AGM+K ++ I++ + T Y +L AA + +F FLPL+LA +
Sbjct: 63 KMSSILVPIVPALAGAGMLKALLVILSTYHFIDPTGSTYKILAAASNSVFYFLPLLLAFS 122
Query: 167 AAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPA 226
AK F + F ++AI AL+ P F G F G+P++
Sbjct: 123 CAKSFNAHPFVSVAIVGALLEPT--------------FTGLMKNPGDIVDFMGIPVVL-- 166
Query: 227 SSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWA 286
Y ST++P I AVWA + +E+ K+ I +++ VP LLI VP+ + +GP+ +
Sbjct: 167 MKYSSTLIPAILAVWAYSYLERFLKRFIHQSIEMIAVPMLGLLIMVPVIVIAVGPIGVYL 226
Query: 287 SDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-KGPGVILVASI 345
D +GA + + S +L G ++G W +LVMFGLHWGLVP+ + L G I A+
Sbjct: 227 GDGIGAGIAYMNNVSGMLTGAIIGGGWTLLVMFGLHWGLVPVMLNNLALHGFDTIKPAAA 286
Query: 346 AICFAQAGALLNIMMRTKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCIS 404
FA AGA + ++TK++K++ ++ + ALF GVTEP +YGI++ + P I + I+
Sbjct: 287 TATFASAGAAFGVFLKTKDKKLKSFALSTMVPALFAGVTEPIVYGISIKYKRPLIASLIA 346
Query: 405 GALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLI- 463
G + G ++ + L +P+F+ + T +++I I F L LT L+
Sbjct: 347 GTIAGGFVGAMGTTVMAYVFPALTTLPAFM----TNTFAYYVIGISMAFALSTILTYLLG 402
Query: 464 ---KIPNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGA 520
+I P + S + + AG+ ++++PL G++V L D D VFAS
Sbjct: 403 FDEQIDEAVVAPISNSTSNS-PAIHDNPPAGLAGILLSAPLNGKIVPLTDVKDGVFASEI 461
Query: 521 MGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTA 580
MGKG+AI PS G V +P +GV+ LF TNHAIG+ +++G E+LIHVG+DTV L+G+ F +
Sbjct: 462 MGKGIAIYPSEGAVYSPVNGVVSKLFHTNHAIGIVSEEGVEILIHVGIDTVKLNGELFNS 521
Query: 581 HVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQI 624
H+ +G + KGQLLL+FD+D + + +TTPI++ NT +Y+ I
Sbjct: 522 HINEGDFITKGQLLLTFDLDELITRDFDMTTPIVIANTDDYRNI 565
>gi|154503235|ref|ZP_02040295.1| hypothetical protein RUMGNA_01059 [Ruminococcus gnavus ATCC 29149]
gi|153796229|gb|EDN78649.1| hypothetical protein RUMGNA_01059 [Ruminococcus gnavus ATCC 29149]
Length = 486
Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 196/459 (42%), Positives = 282/459 (61%), Gaps = 12/459 (2%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y ++ ++IV +GGK+NI + HC TRLRF LK E + + +GV++VVK GGQYQ
Sbjct: 13 YEKMVREIVEAIGGKENILNVYHCATRLRFQLKQEDTIQDETVKNIEGVLSVVKGGGQYQ 72
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFD-----RFIALVSGLFQPMLGT 119
+VIG HV DVY+ +L V + E S D + + D RFI +SG+F P+L
Sbjct: 73 IVIGRHVGDVYQELLSVYDMQKEESGLKDAKEFKEEMKDKKISSRFIDTISGVFTPILNL 132
Query: 120 LSAAGMIKGVVAIMAALGVAK-TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTA 178
L A G+IK +A+M A G+ T G Y +L+ AGD F F+P+ L TA K+F F
Sbjct: 133 LIATGIIKCFLALMTATGLMDATAGTYQILSIAGDCFFYFMPVFLGYTAMKKFGGTPFVG 192
Query: 179 LAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIA 238
+AIG ALVYP+IA E PLYTLFAGT ESP++ TF G+P+I +Y S+V+PV+
Sbjct: 193 MAIGAALVYPSIAVIMGGE-PLYTLFAGTIFESPVYVTFLGIPVIL--MNYASSVIPVVL 249
Query: 239 AVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIY 298
+ AK+E+ + IP +VK F+VP T+L V L LV+GP+ ++AS+L+GAL ++
Sbjct: 250 VCFFAAKLERFLDRCIPQLVKAFVVPMLTILGGVVLGLLVLGPIATFASNLLGALMGFLF 309
Query: 299 DFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLN 357
+ + + G + GA QV VMFG+HWG V L + + G I +A +A FAQAG +L
Sbjct: 310 EINSTICGFLYGALIQVCVMFGVHWGFVALNVNNMATLGYDAITIAGLASAFAQAGVVLM 369
Query: 358 IMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDV 417
IM++TK +K++ + PA ISA+FG+TEPAIYG+TL + PFI+ C++ + GA + F V
Sbjct: 370 IMLKTKNKKLKGVCGPAIISAMFGITEPAIYGVTLQFKRPFILACLASGIGGAIIGFGGV 429
Query: 418 KMQVMGGMGLFAIPSFIEASNSM--TLIHFLIAIVANFV 454
K G G+F I T++ +IA +A+FV
Sbjct: 430 KQYSAGTNGIFGWLQVINPQTGFDSTVVAAIIACIASFV 468
>gi|77413584|ref|ZP_00789771.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus agalactiae 515]
gi|77160350|gb|EAO71474.1| PTS system, beta-glucosides-specific IIABC components
[Streptococcus agalactiae 515]
Length = 622
Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats.
Identities = 210/631 (33%), Positives = 336/631 (53%), Gaps = 30/631 (4%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y E AK I A VGG+ NI + HCVTRLR L ++ + + V+ V++ QYQ
Sbjct: 4 YQETAKAIFAAVGGEKNIQHVTHCVTRLRLVLDNDEIVNDQVIKTIPNVIGVMRKNDQYQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+++GN V + Y L + E + + ++ ++ I ++G+ P++ L G
Sbjct: 64 IILGNDVNNYYNAFLTLGHF--ENTTREFSSQKKSSILEKLIETIAGVITPLIPALLGGG 121
Query: 125 MIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+K + ++ LG+A + V +N GD + F+P+++A +AA RFK+ A +G
Sbjct: 122 MLKVIGILLLMLGIASSSSQTVAFINFFGDAAYYFMPIMIAYSAASRFKVTPVLAATVGG 181
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++P KPL + FG P+ +SY S+V+P++ V+
Sbjct: 182 VLLHPAFVTMVAEGKPL---------------SLFGAPVTL--ASYGSSVIPILIMVFLM 224
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IE+ KI+P ++K F+ P +LI+ LA +V+GP+ + + IY +P
Sbjct: 225 QYIERWINKIVPSIMKSFLQPTLIILISGFLALVVVGPLGVIIGKGLSSAMLSIYHVAPW 284
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
+LGA ++VM G+HW P+ + P V IL A +A AQ A + ++
Sbjct: 285 SALAILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASFAVAVKA 344
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K+++ RQ++ A +SAL G+TEPA+YG+TL + P ISG L GAY+ ++
Sbjct: 345 KQKQTRQVAFAAGLSALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAYIGLVNIASYT 404
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
+ +P +I + +IA +A +L F +T + I G +EK + +
Sbjct: 405 FVVPSIIGLPQYINPQGGNNFSNAVIAAIATIILTFIITWFLGIDE---GENEKSSINA- 460
Query: 482 DSEKERVSAGITE-QVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
E + +G+++ + + SP+ G V+ L PD F+S +G+G+AI PSVGEV AP D
Sbjct: 461 -QEHTHIRSGLSKKETLYSPMVGNVLPLSKVPDETFSSKLLGEGLAITPSVGEVYAPFDS 519
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I LFPT HAI L D G E+LIH+G+DTV L+G+GF V G VK+GQLLL DID
Sbjct: 520 EIISLFPTKHAIALKDDKGVEVLIHIGIDTVELNGEGFEQLVKVGDFVKRGQLLLRMDID 579
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAKGE 631
I GY + +P++VTN+ + Q+E++ K E
Sbjct: 580 FISSKGYSLISPVVVTNSID--QLEIIVKDE 608
>gi|69249431|ref|ZP_00604974.1| Sugar-specific permease, EIIA 1 domain:PTS system,
beta-glucoside-specific IIABC component [Enterococcus
faecium DO]
gi|68194161|gb|EAN08693.1| Sugar-specific permease, EIIA 1 domain:PTS system,
beta-glucoside-specific IIABC component [Enterococcus
faecium DO]
Length = 614
Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 216/622 (34%), Positives = 353/622 (56%), Gaps = 37/622 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y + A++++ ++GG++NI+ L HC TRLRF+LKD SK + L K DGV+ V + Q
Sbjct: 2 NYKQTAEEVLQYIGGEENISHLEHCSTRLRFTLKDNSKVNMSQLEKVDGVMGV-RQNVQC 60
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QV+IGN V +VY+ V + G + + +A + L + + +FQP++ ++
Sbjct: 61 QVIIGNDVVEVYDEVKALLGDNVSSTEEAPKQ--KQKLGSVLLDFIISIFQPLIPAIAGG 118
Query: 124 GMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
G++K ++ + + LG+ Y +LN G FLP+++A+T A + K+NQ A++
Sbjct: 119 GVLKSLLLLASILGLISDQSQTYQILNLVGGAPLYFLPILVAMTTANKLKVNQLVAVSAV 178
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
AL+ P + A E F +F GL I +Y S V P I V
Sbjct: 179 GALILPEMTAMLA--------------EGATFLSF-GLDNI----AYASQVFPAILTVLF 219
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD-FS 301
A++EK F K+ P +++F VP +LLITVP+A L++GP+ ++ +Y+ F
Sbjct: 220 YAQLEKWFTKVSPKPIRIFFVPMMSLLITVPIALLLLGPLGYNVGTAFSSIIVSLYNQFG 279
Query: 302 PVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK--GPGVILVASIAICFAQAGALLNIM 359
V G VL A ++V+ G+H ++P A+ + + + L AS+A ++AGA +
Sbjct: 280 WVATG-VLAAVLPLMVVTGMHKAMIPYAVSSMSELGAELLYLPASLAHNISEAGACFAVS 338
Query: 360 MRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKM 419
++TK++K++ ++ A ISALFG+TEPA+YG+T+ + S + GA+ ++
Sbjct: 339 IKTKDKKLKSTAVSAGISALFGITEPALYGVTILHKRVLYAVMFSSLIGGAFAGIVALQA 398
Query: 420 QVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAE 479
+ G G+ +I F + ++ M L+ +FV+ F ++ +K+
Sbjct: 399 FALVGPGIASITMFADKADPMNLVWAFAVSGISFVVAFAAALVLY--------KDKEVVN 450
Query: 480 SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
++++ E +A +++ V++SP+ G+V++L + D VF+SG +G GVAI P G +VAP D
Sbjct: 451 EVETKME--TAVVSDAVLSSPVNGKVISLSEVKDTVFSSGMVGDGVAIIPEEGILVAPED 508
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G I ++F T HAIGL T +GAELL H+G+DTV L+GKGF A V G KV KGQ L++FDI
Sbjct: 509 GEITMVFETKHAIGLKTANGAELLFHIGIDTVQLEGKGFEAFVRSGEKVAKGQKLIAFDI 568
Query: 600 DTIKEAGYPVTTPIIVTNTANY 621
D IKEAG+ T +VTN NY
Sbjct: 569 DLIKEAGFDPTVICVVTNKDNY 590
>gi|42519782|ref|NP_965712.1| phosphoenolpyruvate-dependent sugar phosphotransferase system
EIIABC, probable beta-glucosides specific [Lactobacillus
johnsonii NCC 533]
gi|41584072|gb|AAS09678.1| phosphoenolpyruvate-dependent sugar phosphotransferase system
EIIABC, probable beta-glucosides specific [Lactobacillus
johnsonii NCC 533]
Length = 620
Score = 317 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 217/624 (34%), Positives = 349/624 (55%), Gaps = 33/624 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y + K I+A VGG+DNI +VHC TRLRF LKDESKAD + GV+ VVK GQYQ
Sbjct: 3 YENMNKQIIAAVGGEDNIQSVVHCATRLRFVLKDESKADDAAAARIPGVLQVVKKAGQYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+VIG+ V DVY ++K+ I + S + + N+FD I++++G P + L+ AG
Sbjct: 63 LVIGSTVEDVYNDLVKMINIENDDSYKSTPKE-KKNIFDTVISVITGSIAPAIPLLAGAG 121
Query: 125 MIKGVVAIMAALGV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M K ++ I+ G+ + Y +LN D + F+P + +AAK F +Q+ +G
Sbjct: 122 MGKVLLLILTISGLLSDKSQTYQILNLIFDTGYFFMPAFIGFSAAKVFNTDQYLGAFMGL 181
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
+P A A+KP+ F G+P+ Y ST++ I +VW
Sbjct: 182 VTEHPIWTAMVAAKKPV---------------EFLGMPVQL--IKYSSTLITAIISVWIM 224
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
+ I K KK P++VK+F+VP T+LIT PL FLVIGP+ + S+ +G + ++ + +
Sbjct: 225 SYIYKYVKKYTPNMVKIFMVPMLTMLITAPLIFLVIGPISNMISEGIGFISMWLFHNAGI 284
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAI--LELQKGPGVILVASIAICFAQAGALLNIMMR 361
+ +L AA+ V G+H L P++I + Q +I V ++ +QA A L + ++
Sbjct: 285 VAIPILAAAYPWFVSIGIHKALSPISIQLVATQGFDPIIRVVALCSNMSQAAASLAVGLK 344
Query: 362 TKEEKVRQLSIPAFISA-LFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
+K +K++ L++ + +A L G+TEPA++G+ LP++ P I GA+ G +F +K
Sbjct: 345 SKNKKLKSLALSSSATAYLGGITEPALFGVNLPLKKPMYGAMIGGAIAGVVASFMKIKAF 404
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ ++P ++ + + + ++ IVA+ V F T +I F P +++
Sbjct: 405 IYVTPAFLSLPMWVSKTENFVIQAIIVIIVAS-VATFIATWMIG----FDDPVDEN---- 455
Query: 481 LDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
++K + + + SP+ G+V L + D FASG MGKG+A+ PS G++ AP DG
Sbjct: 456 --NQKTKFDQVHEKHDLKSPVNGKVEPLSEVKDETFASGVMGKGIAVIPSEGKIYAPDDG 513
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
V+ F T HAIGL D+ A++LIH+G+DTV ++G GF V +G VK GQ L+ FDID
Sbjct: 514 VVTATFDTGHAIGLHLDNDADVLIHIGIDTVQMNGDGFKQLVKKGDHVKAGQELVDFDID 573
Query: 601 TIKEAGYPVTTPIIVTNTANYKQI 624
IK+AGY T +IV N+ ++ ++
Sbjct: 574 KIKKAGYDPTVMMIVLNSKDFLEV 597
>gi|52079180|ref|YP_077971.1| phosphotransferase system (PTS) beta-glucoside-specific enzyme
IIBCA component [Bacillus licheniformis ATCC 14580]
gi|52784547|ref|YP_090376.1| hypothetical protein BLi00748 [Bacillus licheniformis ATCC 14580]
gi|52002391|gb|AAU22333.1| phosphotransferase system (PTS) beta-glucoside-specific enzyme
IIBCA component [Bacillus licheniformis ATCC 14580]
gi|52347049|gb|AAU39683.1| hypothetical protein BLi00748 [Bacillus licheniformis DSM 13]
Length = 621
Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats.
Identities = 224/643 (34%), Positives = 346/643 (53%), Gaps = 37/643 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y + A+D++ HVGGK+NI L HC TRLRF+L D++KAD L K GV+ V + GQ
Sbjct: 2 NYIQTARDVLQHVGGKENIAHLEHCSTRLRFTLIDQNKADVPALEKTPGVIAV-RMSGQC 60
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVE----GNLFDRFIALVSGLFQPMLGT 119
QVVIGN V +VYE + + G + G + E G + FI G+FQP++
Sbjct: 61 QVVIGNDVIEVYEELTGLLGGALSGQNGSSHQPKEKRKVGTVLLDFIV---GVFQPLVPA 117
Query: 120 LSAAGMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTA 178
++ G++K + + + G G Y +LN GD FLPL++A+T A + K+N A
Sbjct: 118 IAGGGILKSFLLLFSLFGFIDAKGQTYQILNMVGDAPLYFLPLLVAVTTANKLKVNPLVA 177
Query: 179 LAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIA 238
L+ AL+ PN+ A T L++ F + I +Y V PVI
Sbjct: 178 LSAVGALILPNMTAMLTEGAQLFS---------------FDVKNI----AYAYQVFPVIL 218
Query: 239 AVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIY 298
+V A++EK F +I P +++F VP +L+ITVP+ L++GP+ A AL ++
Sbjct: 219 SVLLYAQMEKWFTRISPKPIRIFFVPMMSLVITVPITLLLLGPIGFTAGQGFTALILAMF 278
Query: 299 DFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK--GPGVILVASIAICFAQAGALL 356
D + +L A +V G+H +VP A+ + + L AS+A A++GA
Sbjct: 279 DKVGWIAVAILAAVLPFMVASGMHKAMVPYAVTTMGNLGKEALYLPASLAHNIAESGACF 338
Query: 357 NIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFD 416
I +RTK++ +R +I A ISA FG+TEPA+YG+TL + I + G ++
Sbjct: 339 AIALRTKDKVLRSTAISAGISAFFGITEPALYGVTLQNKRVLSSVMIGSFIGGIFIGLVG 398
Query: 417 VKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKD 476
++ V+ G GL ++ FI S+ + +F+ A++ + I E +
Sbjct: 399 LQAFVLVGPGLASMSMFI--SDELPR-NFMFAVIGFAISFAVAFAAAFILGKDRKTEETE 455
Query: 477 AAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVA 536
+ E++ A ++ SP+ G++++L D D +F+S MG+G+AI PS GE+ A
Sbjct: 456 KEAEPGAFAEKLGA---DETFKSPVIGQMISLSDVEDDIFSSKVMGEGIAIIPSKGELYA 512
Query: 537 PADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLS 596
P DG I LLF TNHA+G+ T +G E+L H+G+DTV L+GK F V G KVK G LL+
Sbjct: 513 PVDGEISLLFETNHALGMKTANGVEVLFHIGIDTVQLEGKFFKPLVQAGDKVKAGDLLIQ 572
Query: 597 FDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
FD++ IKEAGY T ++TNT Y I+V E+ + L+
Sbjct: 573 FDLEKIKEAGYDPVTLAVITNTDQY-DIKVTQLKEVNRQDTLM 614
>gi|145955694|ref|ZP_01804695.1| hypothetical protein CdifQ_04000897 [Clostridium difficile
QCD-32g58]
Length = 504
Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats.
Identities = 194/533 (36%), Positives = 296/533 (55%), Gaps = 50/533 (9%)
Query: 125 MIKGVVAIMAAL-----GV-AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTA 178
MIKG+++++A GV K +Y++LNA D +F F+P+IL TAAK F N+ +
Sbjct: 1 MIKGILSVLAMYYMNKNGVDIKETQSYIILNAMADSIFYFMPIILGYTAAKVFNANKIIS 60
Query: 179 LAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIA 238
+ +G L YP A E+ + F GL + ++Y S+V+P+I
Sbjct: 61 MVLGATLCYPTFTALMAGEESV---------------RFLGLAVT--KATYTSSVIPIII 103
Query: 239 AVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIY 298
A+WA + +EK +K IP+V+K+ +VP +L++ +P + GP+ + +++ + IY
Sbjct: 104 AIWALSYVEKVLEKYIPEVIKIIMVPTLSLVVMLPATLFLFGPIGIYIGNVINFSYKYIY 163
Query: 299 DFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLN 357
+ SP L G +G W VLV+FG H L+P+ I ++ Q G +L + A F+QAGA L
Sbjct: 164 ELSPALCGAFVGGLWCVLVIFGAHRALLPIGISDVAQTGRQNLLAFAGAANFSQAGAALG 223
Query: 358 IMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDV 417
+ +TK + ++ +S+ A I+ALFG+TEPAIYG L ++ P + I GA GA +
Sbjct: 224 VFFKTKNQGLKTISMSATITALFGITEPAIYGANLRLKKPMVCAVICGAFGGAIMGMGGA 283
Query: 418 KMQVMGGMGLFAIPSFIEASNSMTL-------IHFLIAIVANFVLGFGLTQLIKIPNLFG 470
G+ IP + EA L I F + ++ +++GF
Sbjct: 284 YGNAFANQGVLTIPVYAEAGALGFLSYLGGCAIAFFGSAISTYLVGF------------- 330
Query: 471 GPSEKDAAESLDSEKERVSAGITEQVV--TSPLAGEVVALEDTPDAVFASGAMGKGVAIE 528
+D ES + E + + V+ TSP+ GE + L + D VFAS AMG+G+A+
Sbjct: 331 ----EDLEESSNKENSFIKVETKDGVIDITSPVEGECIELSEVKDDVFASKAMGEGIAVL 386
Query: 529 PSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKV 588
P+ G + AP D + LFPT HAIGL D+GAE+LIHVG++TV L+GK FT HV QG V
Sbjct: 387 PTKGVITAPTDCEVASLFPTLHAIGLKLDNGAEMLIHVGINTVELNGKYFTKHVNQGDLV 446
Query: 589 KKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
KKG L+SFDID IK+AGY VTTP+IV NT ++ Q+ + + ++ L
Sbjct: 447 KKGDKLISFDIDKIKKAGYDVTTPVIVNNTFDFGQVVSCKSSYVSTNDNIISL 499
>gi|116670443|ref|YP_831376.1| PTS system, beta-glucoside-specific IIABC subunit [Arthrobacter sp.
FB24]
gi|116610552|gb|ABK03276.1| PTS system, beta-glucoside-specific IIABC subunit [Arthrobacter sp.
FB24]
Length = 627
Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats.
Identities = 211/640 (32%), Positives = 335/640 (52%), Gaps = 30/640 (4%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVV 66
E AK I+ HVGG NI+ L HC TRLRF+L DE+K + L GV+ VVK Q QV+
Sbjct: 5 ESAKAILEHVGGAGNISNLHHCSTRLRFTLADENKTNETALKAIPGVIGVVKGSSQTQVI 64
Query: 67 IGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMI 126
IGN V ++Y V K+ G + + L + V +F P++ ++ +G+
Sbjct: 65 IGNGVGEIYAAVEKLRGGNQPAAPAGKRPFSWKRLGATIMDFVVSVFTPIIPAIAGSGIF 124
Query: 127 KGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFAL 185
K ++ + +ALG + Y +L D +F F+PL++A T+AK+ +N A+ + L
Sbjct: 125 KSLLVLASALGWLDARSENYKLLAVIPDAVFGFIPLLVAYTSAKKLNVNIPLAIGLVGVL 184
Query: 186 VYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGAK 245
VYP A T + + FG+ + P +Y + V P I AV +
Sbjct: 185 VYPAFTALATKDGGI---------------ALFGMTV--PVVTYTAQVFPAILAVLLLSV 227
Query: 246 IEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVLY 305
+E+ F KI ++VF VP ++I P ++GP+ W L+ TG++ +
Sbjct: 228 VERFFTKITWAPIRVFFVPMMCIVIVAPATIFLLGPLGFWLGTLLTGAMTGLHGSFGWVA 287
Query: 306 GIVLGAAWQVLVMFGLHWGLVP--LAILELQKGPGVILVASIAICFAQAGALLNIMMRTK 363
++L +++ G+H +P +A + + AS+A ++AGA + +RTK
Sbjct: 288 VMLLAGVLPLIISVGMHKAFIPPTIATIAATGQESLYQPASLAHNLSEAGATFGVAVRTK 347
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
+R +I ISALFG+TEPA+YG+TL R FI GAY+ V V
Sbjct: 348 STALRATAISGGISALFGITEPALYGVTLQNRRAFIAVVAGSMSAGAYMGIMQVAGFVAV 407
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
G GL +I SFI+A N L++ +I ++ + F + ++ DA+ ++ +
Sbjct: 408 GPGLASITSFIDAENPQNLLNAVIGLLIAVAVSFTTSLIL---------WRDDASATVRA 458
Query: 484 EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIR 543
+ + V SP++G+++AL + D VF++G +G+G+AI P+ G V AP GV+
Sbjct: 459 LGDVKLPALNSANVVSPISGDIIALSEVNDPVFSAGILGEGIAIRPTDGAVRAPIAGVVT 518
Query: 544 LLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIK 603
L + HAIG+ DDG E+L+HVG+DTV L G FTAHV KV+ GQLLL D+ I
Sbjct: 519 ALLGSKHAIGIRGDDGVEVLVHVGLDTVQLGGSAFTAHVAINDKVEAGQLLLEADLTAIT 578
Query: 604 EAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
EAGY TTP+++ N+A++ + + A G + G LL + +
Sbjct: 579 EAGYDTTTPVVIVNSASF-TVALTASGSVTAGEPLLSVNE 617
>gi|153815503|ref|ZP_01968171.1| hypothetical protein RUMTOR_01738 [Ruminococcus torques ATCC 27756]
gi|145847145|gb|EDK24063.1| hypothetical protein RUMTOR_01738 [Ruminococcus torques ATCC 27756]
Length = 601
Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats.
Identities = 214/613 (34%), Positives = 336/613 (54%), Gaps = 36/613 (5%)
Query: 29 VTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIGNHVPDVYETVLKVAGISGE- 87
+TRLRF LKD+S D L GV+ AGGQYQV+IGN V +VY+ ++ ++GIS
Sbjct: 1 MTRLRFVLKDQSVPDQKKLESIKGVMGTNIAGGQYQVIIGNSVGNVYKELVAMSGISDTT 60
Query: 88 GSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMIKGVVAIMAA--LGVAKTDG-A 144
+ + + N + ++G P+ + A G+IK ++ I LGV ++
Sbjct: 61 ADYKVEQEKQKVNPIVAALDFIAGCMTPLFTAIIAGGLIKVLLVIFGPTLLGVLFSESDT 120
Query: 145 YVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLF 204
Y+++NA GD F FLP+++A TA+K+ N F A+ + L+YP++ +++ + LF
Sbjct: 121 YILMNALGDAPFYFLPVLVAFTASKKLNCNSFLAVMVSSVLIYPDVITLLGSDQATH-LF 179
Query: 205 AGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVP 264
P+ SY S+++P + A +E KI+PD K F+ P
Sbjct: 180 GIIPVVH---------------GSYSSSIVPAMLATILLKYVEIIVDKIVPDWSKNFLKP 224
Query: 265 FFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWG 324
++IT P+ ++ P+ + + + IY+F+P L ++ AA +VM G+HW
Sbjct: 225 LLIVIITAPITLCLLAPLGLMVGNGLQFVIDAIYNFAPWLAMMLFSAAMPFIVMTGMHWA 284
Query: 325 LVPLAILELQKGPG---VILVASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALF- 380
VP +L L PG ++L A + AQAGA + +TK++++R+++IPA ISAL
Sbjct: 285 FVPACLLGLAN-PGYDLLLLPAMLTSNIAQAGATFGVAAKTKDKELREMAIPAGISALLA 343
Query: 381 GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSM 440
GVTEPA+YGITL +R P I CI+ + G + +K L AI FI +
Sbjct: 344 GVTEPAMYGITLRLRKPMIAACIASGIGGLIMGITSLKAYAFATPCLTAIVQFISPDSGK 403
Query: 441 TLI----HFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDSEKERVS---AGIT 493
+I ++++V +FVL F +T K N+ + +A+ E E+V+ AG+
Sbjct: 404 NMICAVVVLIVSLVLSFVLSFIMT---KNNNVQLETVKAEASRGKVQESEKVAEQGAGMP 460
Query: 494 EQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIG 553
++ T+P+ GEV+ L + D FA+G +G+G A+ P+ G+V AP DG +F T HA+
Sbjct: 461 TEI-TAPIKGEVIPLTEVKDPTFATGILGEGFAVVPAEGKVYAPFDGTCDSIFDTLHAMA 519
Query: 554 LATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPI 613
L +D+G ELLIHVG++TV+L G FT HV G KKG LLL FDI+ I +AG + TP+
Sbjct: 520 LISDNGVELLIHVGLETVSLKGVPFTVHVENGQHFKKGDLLLEFDIEAILKAGCEIQTPV 579
Query: 614 IVTNTANYKQIEV 626
IV N Y+ + V
Sbjct: 580 IVANADKYEHLTV 592
>gi|37524589|ref|NP_927933.1| hypothetical protein plu0585 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784013|emb|CAE12880.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 615
Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats.
Identities = 196/622 (31%), Positives = 337/622 (54%), Gaps = 36/622 (5%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVV 66
+ AK+I+ GG++NI K HCVTRLRF++ D+SK D + K GV+ GQ Q++
Sbjct: 5 DFAKEIIIFTGGQENINKSWHCVTRLRFNIIDDSKVDIVAIRKMQGVIGAHFHSGQLQII 64
Query: 67 IGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMI 126
IGN V +++ ++K + + + ++ + ++SG+F P+L + AG++
Sbjct: 65 IGNRVVEIFSEIIKQLKEN-----EGNHYGLKKGFISHILDVISGIFVPVLPAIVGAGLL 119
Query: 127 KGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFAL 185
KG + + V++ Y +L D FLP++LA +AA++FK N+F A + L
Sbjct: 120 KGGLIFFYMMDWVSEQSNEYKLLYILSDTPLYFLPVLLAFSAARKFKTNEFIAATLACIL 179
Query: 186 VYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGAK 245
+YP ++ ++ Y FS F I PA+ Y T +P+I VW +
Sbjct: 180 IYPTLSHLVSSSGGGY------------FSVF---GITIPANHYSYTAIPIILGVWLLSY 224
Query: 246 IEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVLY 305
I + + IP V+K+ + P LLI+ P+ ++ P+ + + ++ +
Sbjct: 225 IHRWVDRFIPTVLKIILTPLLVLLISAPILLIIAAPLGNTIGLYLEKWLLILFSVAGPFA 284
Query: 306 GIVLGAAWQVLVMFGLHWGLVPLAILELQKGPG---VILVASIAICFAQAGALLNIMMRT 362
G++LG +LV+ G+H+ +P ++ K G ++L S A AQAGA L + ++
Sbjct: 285 GLLLGGLIPILVITGMHYAFLP-SVFANFKSLGYDFMLLPISFASNIAQAGATLAVAIKI 343
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
K+ +++ L+ + SA GVTEPA+YG+TL +R PF +SGA+ GA + F VK+
Sbjct: 344 KDRQMKSLAYSSSFSAFLGVTEPAMYGVTLKLRKPFYAALMSGAVGGAIIGIFSVKIFAF 403
Query: 423 GGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLD 482
GL ++P +I+ +S I L+ I ++F++ F T L+K+ + +S+
Sbjct: 404 SVPGLVSLPFYIQ-KDSNNFIFILLGIFSSFLVAFISTLLMKL---------ESNVDSIV 453
Query: 483 SEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVI 542
K R S + ++ SP+ G +L PD F+ +G G+AI P+ G V +P +G +
Sbjct: 454 LIKPRFSKK-KKIILRSPMTGTTESLSRVPDDTFSEKIIGDGIAIIPTEGVVKSPFNGKV 512
Query: 543 RLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTI 602
++ PT HAIGL +D G ELLIH+G++TV L G GF +++G +V G++L++FD++ +
Sbjct: 513 SMITPTGHAIGLISDQGVELLIHIGIETVGLQGAGFNLQIIEGQRVVAGEVLVNFDLEFL 572
Query: 603 KEAGYPVTTPIIVTNTANYKQI 624
+E + +PIIVTN+ Y I
Sbjct: 573 QENKIQIISPIIVTNSEEYHSI 594
>gi|145296639|ref|YP_001139460.1| hypothetical protein cgR_2547 [Corynebacterium glutamicum R]
gi|140846559|dbj|BAF55558.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 661
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 219/672 (32%), Positives = 340/672 (50%), Gaps = 52/672 (7%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D+ +LA+ I+ +GG+DNI HC TRLR LKD D L + + GG +
Sbjct: 2 DHKDLAQRILRDIGGEDNIVAAAHCATRLRLVLKDTKDVDRQSLDDDPDLKGTFETGGMF 61
Query: 64 QVVIG----NHV-PDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLG 118
Q+++G +HV ++ + K +S E D A N F R + +++ +F P++
Sbjct: 62 QIIVGPGDVDHVFKELDDATSKDIAVSTEQLKDVV--ANNANWFSRAVKVLADIFVPLIP 119
Query: 119 TLSAAGMIKGVVAIMAALGV----------AKTDGAYVVLNAAGDGLFQFLPLILAITAA 168
L G++ + ++ A + + G ++N F FLP+++ TA
Sbjct: 120 ILVGGGLLMAINNVLVAQDLFGPQSLVEMFPQISGVAEMINLMASAPFAFLPVLVGFTAT 179
Query: 169 KRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASS 228
KRF N+F IG A+V+P + + T+ AG E P++S FGL + +
Sbjct: 180 KRFGGNEFLGAGIGMAMVFPTLVNGYDVAA---TMAAG---EMPMWS-LFGLDV--AQAG 230
Query: 229 YLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASD 288
Y TVLPV+ W A IEK K + I P TLL+T L F+ IGP M W D
Sbjct: 231 YQGTVLPVLVVSWILATIEKFLHKRLKGTADFLITPVLTLLLTGFLTFIAIGPAMRWVGD 290
Query: 289 LVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC 348
L+ G+YDF + G++ G + +V+ GLH P+ + +G I +
Sbjct: 291 LLAHGLQGLYDFGGPVGGLLFGLVYSPIVITGLHQSFPPIELELFNQGGSFIFATASMAN 350
Query: 349 FAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALT 408
AQ A L + K EK++ L+ + +SA+ G+TEPAI+G+ L +R PF + + A+
Sbjct: 351 IAQGAACLAVFFLAKSEKLKGLAGASGVSAVLGITEPAIFGVNLRLRWPFYIGIGTAAIG 410
Query: 409 GAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNL 468
GA +A FD+K +G G + S I+A + ++ FL+ V F + FG + +
Sbjct: 411 GALIALFDIKAVALGAAGFLGVVS-IDAPD---MVMFLVCAVVTFFIAFGAAIAYGLYLV 466
Query: 469 FGGPSEKDAAESLDSEKERVSAGITE-------------QVVTSPLAGEVVALEDTPDAV 515
++ + D+ V+AG T+ ++ +PL GE +AL DA+
Sbjct: 467 -----RRNGSIDPDATAAPVTAGTTKAEAEAPAEFSNDSTIIQAPLTGEAIALSSVSDAM 521
Query: 516 FASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLAT--DDGA--ELLIHVGMDTV 571
FASG +G GVAI P+ G++V+P G I + FP+ HA + T +DG+ ++L+H+G DTV
Sbjct: 522 FASGKLGSGVAIVPTKGQLVSPVSGKIVVAFPSGHAFAVRTKAEDGSNVDILMHIGFDTV 581
Query: 572 ALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGE 631
L+G F QG +VK G+LL FDID IK AGY VTTPI+V+N + GE
Sbjct: 582 NLNGTHFNPLKKQGDEVKAGELLCEFDIDAIKAAGYEVTTPIVVSNYKKTGPVNTYGLGE 641
Query: 632 IQLGNQLLELKK 643
I+ G LL + K
Sbjct: 642 IEAGANLLNVAK 653
>gi|116494604|ref|YP_806338.1| beta-glucosides PTS, EIIBCA [Lactobacillus casei ATCC 334]
gi|116104754|gb|ABJ69896.1| beta-glucosides PTS, EIIBCA [Lactobacillus casei ATCC 334]
Length = 617
Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 217/649 (33%), Positives = 338/649 (52%), Gaps = 48/649 (7%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D+ ++ I+A VGG N+ L HC TRLRF+L D+++ D L + V++ V +G +
Sbjct: 3 DHQKITDRIMAAVGGAKNVKTLNHCATRLRFTLADKTQFDIQRLEQMPEVLSAVNSGDES 62
Query: 64 QVVIGNHVPDVYETVLKVAGI--SGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLS 121
QVVIG +V Y + K I +G+G+ + D E N+ R + + + P++ L
Sbjct: 63 QVVIGANVTKYYAEITKNYHIREAGDGTKPSADH--EKNILKRVLNAIVSIMAPIITVLI 120
Query: 122 AAGMIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAI 181
A GM K V+AI+A G+ Y+ L+ D F FLP +LA++AAK+F N + A+ +
Sbjct: 121 AGGMFKVVIAILALFGLDPKGVPYLTLSFMADAAFYFLPFMLAVSAAKKFNTNTYLAMMM 180
Query: 182 GFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVW 241
L++P+ A KP+ FG PI +SY +V+P+I VW
Sbjct: 181 AGVLLHPSFTAMVATGKPI---------------ALFGAPIRL--ASYGGSVIPIILIVW 223
Query: 242 AGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFS 301
+ +E+ +KI P ++K + P LIT P+A +VIGP+ S D + T I +
Sbjct: 224 FMSYVERFAEKIAPTIIKTMLKPLLVALITAPVALIVIGPIGSLLGDGLYTAVTFINQHT 283
Query: 302 PVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-------GPGVILVASIAICFAQAGA 354
P L V+GA +LVM G+H L+PLA L + K GPG+ +A AQAGA
Sbjct: 284 PWLVPTVVGAFTPLLVMVGMHVSLLPLATLSITKFGSETIMGPGM-----LASNIAQAGA 338
Query: 355 LLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAF 414
I R K+ + RQ+++ A ++AL G+TEPA+YG+TL + +SG L G +
Sbjct: 339 AAAIAFREKQARGRQIALSASVTALSGITEPALYGVTLKYKRALTCVMVSGGLAGLFAGL 398
Query: 415 FDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSE 474
+ G G+F +P FI +N + L + F L F T L I +
Sbjct: 399 TGLVRYSFGSPGIFTLPVFI-GNNPANFRNALFTVAIAFGLTFVSTYLFAI------VEK 451
Query: 475 KDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEV 534
K A++ + I Q + S + G+++ L+D D VFASG++G GVAI P +
Sbjct: 452 KTPADTNE-------PAIKCQNLKSVVTGKLIPLKDVNDDVFASGSLGHGVAIAPEDDLI 504
Query: 535 VAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLL 594
VAP D V+ + +PT HAIGL T G E+LIHVG++TV ++G+GF V V G+ L
Sbjct: 505 VAPVDAVVTMTYPTGHAIGLTTATGQEILIHVGINTVKMNGRGFKTLVNTDQHVTAGEPL 564
Query: 595 LSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
+ D+ I++ G+ T +++ NT +I + K + + LL + +
Sbjct: 565 IQIDLKLIEQEGFDPTIMVLLLNTPA-DRITIQEKATVTTDDHLLSVTQ 612
>gi|150019647|ref|YP_001311901.1| PTS system, glucose subfamily, IIA subunit [Clostridium
beijerinckii NCIMB 8052]
gi|149906112|gb|ABR36945.1| PTS system, glucose subfamily, IIA subunit [Clostridium
beijerinckii NCIMB 8052]
Length = 616
Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats.
Identities = 202/643 (31%), Positives = 342/643 (53%), Gaps = 38/643 (5%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVV 66
++ I+ VGGKDNI HC+TRLRF LKD++K + + + +G+V Q+Q+V
Sbjct: 5 DVVAKIIKEVGGKDNIKNAWHCMTRLRFDLKDKTKVNQEAIQNLEGIVGSQFNKEQFQIV 64
Query: 67 IGNHVPDVYETVLKVAGIS-GEGSVDADDDAV---EGNLFDRFIALVSGLFQPMLGTLSA 122
IG V Y ++ ++ S D D + + +L RF+ VSG+F P++ ++
Sbjct: 65 IGTTVDKYYNILITQLDLNINNNSSDKDSNNQLDDKKSLTTRFMDTVSGVFGPIVPAIAG 124
Query: 123 AGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAI 181
AGMIKG++A + AL +A V++ G+F FLP LA++AAK+FK N++ ++AI
Sbjct: 125 AGMIKGLIAGLVALKFIAGDTDTMKVIDMIASGVFTFLPFFLAVSAAKKFKTNEYLSVAI 184
Query: 182 GFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVW 241
++YP + + A K F F LPI P +Y S+V+P+I AVW
Sbjct: 185 AATIMYPTMVDTAKAGK------------IGAFYVFGILPI--PVFNYSSSVIPIIFAVW 230
Query: 242 AGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFS 301
+ + K K +PD ++ P TL I+ L V GP+ + + + ++ S
Sbjct: 231 VLSYVHKLIDKHMPDTMRTVFTPTLTLFISGFLTLGVTGPIGIYLGRGLAWIIASLFSIS 290
Query: 302 PVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALLNIMM 360
P+L G+++GA V ++ G+H + P+A+ +G +++ + GA +
Sbjct: 291 PILAGVIVGAIRPVAILTGMHHAMTPIALQNFATQGYDMLMPMMFMTNISITGAAAAVYF 350
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
+ ++ + + I + IS LFG+TEPA++GI + F+ I + A+++FF V++
Sbjct: 351 KENTKQGKTIVISSVISGLFGITEPALFGILSKYKKAFLAATIGSTVASAFISFFGVRLY 410
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+F+IP++I ++ LIA+ +F L + LF K++ S
Sbjct: 411 GYVLSSVFSIPAYIGPYFIYAMLGILIALSVSFALSY----------LFVVKGNKESPSS 460
Query: 481 L-DSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
+ +++ E +S + S + GEV A+ + PD+ FA +G G + PS G VVAP D
Sbjct: 461 VKNNDPETISE------MASVMTGEVKAITEAPDSTFAQKLLGDGFVVFPSTGTVVAPFD 514
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
G I +++ T HAI L ++ G E+LIH+G+DTV L+G+GF V +G VK GQ +L+ D+
Sbjct: 515 GKITMIYKTKHAIALTSNSGLEVLIHIGLDTVTLNGEGFELLVKEGDNVKIGQTILNVDL 574
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
+K + TP+I+TN N K I + G ++ G +L++K
Sbjct: 575 AFMKSKEIQMATPVIITNL-NEKVITLKKTGNVKAGEIVLDIK 616
>gi|4704715|gb|AAD28228.1|AF121254_10 beta-glucoside specific transport protein; BglS [Enterococcus
faecium]
Length = 618
Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats.
Identities = 201/624 (32%), Positives = 348/624 (55%), Gaps = 38/624 (6%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y + K I+ VGGK+NI +VHC+TRLRF+L D++KA T+ L DGV+ VV YQ
Sbjct: 4 YHDFNKHIIELVGGKENIEAVVHCMTRLRFTLIDKTKAQTNKLKNLDGVIDVVSNNVAYQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
++IG HV DVY+ ++ +S + +++ + + + N + ++S P+L + AG
Sbjct: 64 IIIGTHVNDVYKELMTQLELSPKTTLE--EQSGKKNPIKAALDVISESMTPILEPIICAG 121
Query: 125 MIKGVVAIMAALGVAKTDGA-YVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
++ V++I + G+ D + Y + +A +F FLP+++A++ AKR + + A+A+
Sbjct: 122 LLAAVLSIASLTGIISPDSSTYHIFDALRSAVFYFLPILMAMSCAKRLGASPYLAVALAA 181
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
+ +++S K L FG+ + P +Y ++ +P++ A+W
Sbjct: 182 TI----LSSSINDVKGL---------------ELFGIGL--PQITYSNSFIPILLAIWFM 220
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
+ K K++IP+ ++ F+ P +LIT+P L+ GP+ + + + F + +
Sbjct: 221 GYVTKVVKRVIPNTLQYFLTPLLVMLITLPATLLIFGPLGFYMGEGIIGFFNLLMKYVGS 280
Query: 304 LYGIVLGAAWQ-VLVMFGLHWGLVPL-AILELQKGPGVILVASIAIC-FAQAGALLNIMM 360
+ ++L +A Q ++M G ++P+ A L G ++S I A GA+L +
Sbjct: 281 WFVMMLYSALQPFIIMLGAGNFIMPVVASLIAANGYDPAFISSCTISDIAVGGAMLGYFL 340
Query: 361 RTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
RT+ K +QL +SA+ GVTEPAIYG+ + R PF+ I G L G + VK
Sbjct: 341 RTRNLKQKQLFGTVTLSAVLGVTEPAIYGVFVKYRRPFVAVMIGGGLGGLFAGLTSVKAY 400
Query: 421 VMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAES 480
+ GLF +P++I + M L A+V +F G + L G P++++ E+
Sbjct: 401 SVA-WGLFGLPAYIGEGDFMNFWFMLAAVVISFA-GSAVAAY-----LLGVPAQEEDQET 453
Query: 481 LD---SEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAP 537
++ +EK + + + + + GEV++L + D F++GA+GKG+AI+P + +P
Sbjct: 454 INHIIAEKGK-DKNLRTSSLGNVVEGEVISLNEVKDQAFSTGALGKGIAIKPIDTHLYSP 512
Query: 538 ADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSF 597
DG I ++FPTNHAIG+ + DG E+LIH+G+DTV L+GK F ++ QG K+++GQLL +
Sbjct: 513 VDGEITVVFPTNHAIGIQSQDGIEILIHIGIDTVELEGKYFNLNIKQGDKIQRGQLLGTV 572
Query: 598 DIDTIKEAGYPVTTPIIVTNTANY 621
D D I+EAGY +T ++VTNT +Y
Sbjct: 573 DFDKIQEAGYDTSTIVVVTNTDSY 596
>gi|19553840|ref|NP_601842.1| phosphotransferase system IIC component [Corynebacterium glutamicum
ATCC 13032]
gi|62391481|ref|YP_226883.1| ENZYME II SUCROSE PROTEIN [Corynebacterium glutamicum ATCC 13032]
gi|21325414|dbj|BAC00036.1| Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Corynebacterium glutamicum ATCC 13032]
gi|41326822|emb|CAF21304.1| ENZYME II SUCROSE PROTEIN [Corynebacterium glutamicum ATCC 13032]
Length = 661
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 217/672 (32%), Positives = 340/672 (50%), Gaps = 52/672 (7%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D+ +LA+ I+ +GG+DNI HC TRLR LKD D L + + GG +
Sbjct: 2 DHKDLAQRILRDIGGEDNIVAAAHCATRLRLVLKDTKDVDRQSLDDDPDLKGTFETGGMF 61
Query: 64 QVVIG----NHV-PDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLG 118
Q+++G +HV ++ + K +S E D A N F R + +++ +F P++
Sbjct: 62 QIIVGPGDVDHVFKELDDATSKDIAVSTEQLKDVV--ANNANWFSRAVKVLADIFVPLIP 119
Query: 119 TLSAAGMIKGVVAIMAALGV----------AKTDGAYVVLNAAGDGLFQFLPLILAITAA 168
L G++ + ++ A + + G ++N F FLP+++ TA
Sbjct: 120 ILVGGGLLMAINNVLVAQDLFGPQSLVEMFPQISGVAEMINLMASAPFAFLPVLVGFTAT 179
Query: 169 KRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASS 228
KRF N+F IG A+V+P++ + T+ AG E P++S FGL + +
Sbjct: 180 KRFGGNEFLGAGIGMAMVFPSLVNGYDVAA---TMAAG---EMPMWS-LFGLDV--AQAG 230
Query: 229 YLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASD 288
Y TVLPV+ W A IEK K + I P TLL+T L F+ IGP M W D
Sbjct: 231 YQGTVLPVLVVSWILATIEKFLHKRLKGTADFLITPVLTLLLTGFLTFIAIGPAMRWVGD 290
Query: 289 LVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC 348
++ G+YDF + G++ G + +V+ GLH P+ + +G I +
Sbjct: 291 VLAHGLQGLYDFGGPVGGLLFGLVYSPIVITGLHQSFPPIELELFNQGGSFIFATASMAN 350
Query: 349 FAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALT 408
AQ A L + K EK++ L+ + +SA+ G+TEPAI+G+ L +R PF + + A+
Sbjct: 351 IAQGAACLAVFFLAKSEKLKGLAGASGVSAVLGITEPAIFGVNLRLRWPFFIGIGTAAIG 410
Query: 409 GAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNL 468
GA +A F++K +G G + S I+A + ++ FL+ V F + FG + +
Sbjct: 411 GALIALFNIKAVALGAAGFLGVVS-IDAPD---MVMFLVCAVVTFFIAFGAAIAYGLYLV 466
Query: 469 FGGPSEKDAAESLDSEKERVSAGITE-------------QVVTSPLAGEVVALEDTPDAV 515
++ + D+ V AG T+ ++ +PL GE +AL DA+
Sbjct: 467 -----RRNGSIDPDATAAPVPAGTTKAEAEAPAEFSNDSTIIQAPLTGEAIALSSVSDAM 521
Query: 516 FASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLAT--DDGA--ELLIHVGMDTV 571
FASG +G GVAI P+ G++V+P G I + FP+ HA + T +DG+ ++L+H+G DTV
Sbjct: 522 FASGKLGSGVAIVPTKGQLVSPVSGKIVVAFPSGHAFAVRTKAEDGSNVDILMHIGFDTV 581
Query: 572 ALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGE 631
L+G F QG +VK G+LL FDID IK AGY VTTPI+V+N + GE
Sbjct: 582 NLNGTHFNPLKKQGDEVKAGELLCEFDIDAIKAAGYEVTTPIVVSNYKKTGPVNTYGLGE 641
Query: 632 IQLGNQLLELKK 643
I+ G LL + K
Sbjct: 642 IEAGANLLNVAK 653
>gi|71910288|ref|YP_281838.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS5005]
gi|71853070|gb|AAZ51093.1| PTS system, beta-glucoside-specific IIABC component [Streptococcus
pyogenes MGAS5005]
Length = 566
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 200/583 (34%), Positives = 315/583 (54%), Gaps = 33/583 (5%)
Query: 57 VKAGGQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQP 115
++ GQYQ+++GN V + Y+ L + + D D + +G++ +R I ++G+ P
Sbjct: 1 MRKNGQYQIILGNDVNNYYQAFLSLGHFDNQ---DEDHSSKAKGSILERLIETIAGVITP 57
Query: 116 MLGTLSAAGMIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMN 174
++ L GM+K V ++ LG+A D V +N GD + F+P+++A +AA RFK+
Sbjct: 58 LIPALLGGGMLKVVGILLPMLGLASADSQTVAFINFFGDAAYYFMPVMIAYSAAARFKVT 117
Query: 175 QFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVL 234
A I L++P A KPL T FG P+ +SY S+V+
Sbjct: 118 PVLAATIAGILLHPAFVAMVAEGKPL---------------TLFGAPVT--PASYGSSVI 160
Query: 235 PVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALF 294
P++ V+ IEK +++P V+K F+ P +LI+ LA +V+GP+ +
Sbjct: 161 PILMMVYLMQYIEKWVNRLVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGQGLSNTM 220
Query: 295 TGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAG 353
IY +P L +LGA ++VM G+HW P+ + P V IL A +A AQ
Sbjct: 221 LAIYHVAPWLALAILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGA 280
Query: 354 ALLNIMMRTKEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYL 412
A L + +TK+++ RQ+++ A ISAL G+TEPA+YG+TL + P ISG L GA++
Sbjct: 281 ASLAVAFKTKQKQTRQVALAAGISALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAFI 340
Query: 413 AFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGP 472
F ++ + +P +I S + LIA A VL F LT + I
Sbjct: 341 GFVNIASYTFVVPSIIGLPQYINPSGGANFTNALIAGTATIVLAFSLTWFMGID------ 394
Query: 473 SEKDAAESLDSEKERVSAGI-TEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSV 531
E S+ ++ +V +G+ T+Q + +P+ GE++ L + PD F+S +G+G AI PS
Sbjct: 395 EESPKQVSVAADMSQVKSGLSTKQTLYAPMTGEMLFLSEVPDETFSSKLLGEGFAILPSE 454
Query: 532 GEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKG 591
GEV AP DG + FPT HA+ L G E+LIHVG+DTV L G+GF V G VK+G
Sbjct: 455 GEVYAPFDGEVITFFPTKHAVALKNTRGVEVLIHVGIDTVELKGQGFEQLVSVGDVVKRG 514
Query: 592 QLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
Q LL DID I GY + +P++VTN+A +Q+E++ + + ++
Sbjct: 515 QALLKMDIDFITSKGYSLISPVVVTNSA--EQLEIIIQDDKKM 555
>gi|157074858|gb|ABV09541.1| trehalose PTS enzyme II [Streptococcus gordonii str. Challis
substr. CH1]
Length = 669
Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 222/654 (33%), Positives = 329/654 (50%), Gaps = 55/654 (8%)
Query: 9 AKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIG 68
AK ++ +GGK+N++ + HC TR+RF L DE KAD + + V GQ+QV+IG
Sbjct: 8 AKVLLDAIGGKENVSAVTHCATRMRFVLIDEKKADVKAIEEIGAVKGTFTNAGQFQVIIG 67
Query: 69 NHVPDVYETVLKVAGISG-EGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAGMIK 127
N VP Y V+GI G + N R + +++ +F P++ + G+I
Sbjct: 68 NDVPIFYNDFTAVSGIEGVSKEAAKAAAKINQNALQRVMTMLAEIFTPIIPAIIVGGLIL 127
Query: 128 GVVAIM-----AALGVAKTDGAYV------------------------VLNAAGDGLFQF 158
G I+ A G DG L G+ +FQF
Sbjct: 128 GFRNILEGVQIQAFGQKVVDGVLQFTKDGEPIYKTIVDVSKFWAGVNHFLWLPGEAIFQF 187
Query: 159 LPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTF- 217
LP+ + + +++ +Q + +G LV P + ++ L AGTP +S I +
Sbjct: 188 LPVGIVWSVSRKMGTSQILGIVLGICLVSPQLLNAY--------LVAGTP-QSEIAKNWV 238
Query: 218 --FGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLA 275
FG Y + V+P + A + + +E ++K IP+VV + VPF +LL + LA
Sbjct: 239 WDFGF-FTVQRIGYQAQVIPALLAGLSLSYLEIFWRKRIPEVVSMIFVPFLSLLPAIILA 297
Query: 276 FLVIGPV----MSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAIL 331
V+GP+ W S +V A TG + L+G V GA + V+ GLH +
Sbjct: 298 HTVLGPIGWTLGQWLSTIVLAGLTGPVKW---LFGAVFGALYAPFVITGLHHMTNAIDSQ 354
Query: 332 ELQKGPGVILVASIAIC-FAQAGALLNIM-MRTKEEKVRQLSIPAFISALFGVTEPAIYG 389
+ G L IA+ AQ A+ M EK Q+++PA ISA GVTEPA++G
Sbjct: 355 LVADAGGTGLWPMIALSNIAQGSAVFAYYWMNRHNEKEAQIALPATISAYLGVTEPALFG 414
Query: 390 ITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAI 449
+ + PF+ + ++ G F+VK +G GL I S L+AI
Sbjct: 415 VNVKYIYPFVAGMMGSSIAGLLSVSFNVKANAIGVGGLPGILSIQPKYMLAFAAIMLVAI 474
Query: 450 VANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDSEKERVSAGITEQV-VTSPLAGEVVAL 508
FVL +L + + AE+L K+ SA + + V ++SPL+G+V L
Sbjct: 475 AVPFVLTMLFRRLGLFTKVEDEAVKAPQAEALTEAKK--SAPLADLVEISSPLSGQVKEL 532
Query: 509 EDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGM 568
D VFA G MG+GV IEPS GE++AP DG++ +LFPT HA+G+ +D G E+L+H+GM
Sbjct: 533 SQATDPVFAQGVMGQGVLIEPSQGELLAPVDGIVSVLFPTKHAVGIVSDQGVEMLMHIGM 592
Query: 569 DTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYK 622
DTV L+GKGFTAHV QG +VK G L+SFDID IK+AGY TP+I+TN Y+
Sbjct: 593 DTVNLEGKGFTAHVSQGDRVKAGDKLISFDIDLIKDAGYVTETPVIITNQDQYQ 646
>gi|55821706|ref|YP_140148.1| sucrose PTS component II [Streptococcus thermophilus LMG 18311]
gi|55737691|gb|AAV61333.1| sucrose PTS component II [Streptococcus thermophilus LMG 18311]
Length = 648
Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats.
Identities = 224/661 (33%), Positives = 334/661 (50%), Gaps = 51/661 (7%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY ++AK+++ +GG++N+ + HC TRLR +KDE+K + + + V GQY
Sbjct: 17 DYKQIAKEVIEALGGRENVNSVAHCATRLRVMVKDENKINKEKAENIEKVQGAFFNSGQY 76
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
Q++ G V +Y+ V+ + + A +GN F R I +F P+L + A
Sbjct: 77 QMIFGTGTVNKIYDEVVAQGLPTASKDEQKAEAAKQGNWFQRAIRSFGDVFVPLLPAIVA 136
Query: 123 AGMIKGVVA------IMAALGV-----AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRF 171
G+ G+ ++A G A TD Y D F F P ++ +A F
Sbjct: 137 TGLFMGIRGAINNDTVLALFGTTSKAFAATD-FYTYTVVLTDTAFAFFPALICWSAFNVF 195
Query: 172 KMNQFTALAIGFAL---VYPNIAASFT-AEKPLYTLFAGTPIESPIFSTFFGLPIIFPAS 227
+ L +G + PN + A KP+Y FF P
Sbjct: 196 GGSPLLGLVLGLMMVNNALPNAWDVVSGAAKPIY---------------FFDF---IPVV 237
Query: 228 SYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWAS 287
Y ++VLP GAK E+ +K +PDV+ + + P + LA +IGPV
Sbjct: 238 GYQNSVLPAFFVGLIGAKFEQWVRKWVPDVLDLLLRPLVVFAVMSALALFIIGPVFHTVE 297
Query: 288 DLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIA 346
V A I L G+VLG Q++V+ G+H L A L G + A
Sbjct: 298 SYVLAGTEWILALPFGLAGLVLGGIHQIIVVTGVHHVFNLLEANLISNTGKDPLNAIITA 357
Query: 347 ICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGA 406
AQAGA L + ++TK+ K++ L+ PA +SA+ G+TEPAI+G+ L PFIM I+GA
Sbjct: 358 AMTAQAGATLAVGVKTKDSKLKALAFPASLSAVLGITEPAIFGVNLRFGKPFIMGLIAGA 417
Query: 407 LTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIP 466
G + ++ G G+ +P + N L ++I ++ LGF LT +
Sbjct: 418 AGGWLASILNLAGT---GFGVTIVPGTLLYLNGQVL-KYVIMVLVTLALGFALTWI---- 469
Query: 467 NLFGGPSEKDAAESLDSEKERVSAG-----ITEQVVTSPLAGEVVALEDTPDAVFASGAM 521
FG E+ A++ ++ SAG + + + +PL GEVVALE+ D VF+SGAM
Sbjct: 470 --FGYKEEEVEAQTEVVAEDIASAGSAPVALQAETIAAPLKGEVVALENVNDPVFSSGAM 527
Query: 522 GKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAH 581
GKG AI+PS VVAP DG +++ FPT HA GL +D GAE+LIH+G+DTV+LDGKGF A
Sbjct: 528 GKGAAIKPSGNRVVAPFDGEVQIAFPTGHAYGLKSDKGAEVLIHIGIDTVSLDGKGFDAK 587
Query: 582 VVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
V +VKKG +L +FD I EAG TT +IVTNTA+Y+ + ++A G + G + +
Sbjct: 588 VQANQRVKKGDVLATFDSSVITEAGLDDTTMVIVTNTADYEDVSLVATGSVAEGGDFIAV 647
Query: 642 K 642
K
Sbjct: 648 K 648
>gi|55823626|ref|YP_142067.1| sucrose-specific PTS permease, enzyme II [Streptococcus
thermophilus CNRZ1066]
gi|55739611|gb|AAV63252.1| sucrose-specific PTS permease, enzyme II [Streptococcus
thermophilus CNRZ1066]
Length = 635
Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats.
Identities = 224/664 (33%), Positives = 335/664 (50%), Gaps = 51/664 (7%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
M DY ++AK+++ +GG++N+ + HC TRLR +KDE+K + + + V
Sbjct: 1 MQMDYKQIAKEVIEALGGRENVNSVAHCATRLRVMVKDENKINKEKAENIEKVQGAFFNS 60
Query: 61 GQYQVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGT 119
GQYQ++ G V +Y+ V+ + + A +GN F R I +F P+L
Sbjct: 61 GQYQMIFGTGTVNKIYDEVVAQGLPTASKDEQKAEAAKQGNWFQRAIRSFGDVFVPLLPA 120
Query: 120 LSAAGMIKGVVA------IMAALGV-----AKTDGAYVVLNAAGDGLFQFLPLILAITAA 168
+ A G+ G+ ++A G A TD Y D F F P ++ +A
Sbjct: 121 IVATGLFMGIRGAINNDTVLALFGTTSKAFAATD-FYTYTVVLTDTAFAFFPALICWSAF 179
Query: 169 KRFKMNQFTALAIGFAL---VYPNIAASFT-AEKPLYTLFAGTPIESPIFSTFFGLPIIF 224
F + L +G + PN + A KP+Y FF
Sbjct: 180 NVFGGSPLLGLVLGLMMVNNALPNAWDVVSGAAKPIY---------------FFDF---I 221
Query: 225 PASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMS 284
P Y ++VLP GAK E+ +K +PD++ + + P + LA +IGPV
Sbjct: 222 PVVGYQNSVLPAFFVGLIGAKFEQWVRKWVPDILDLLLRPLVVFAVMSALALFIIGPVFH 281
Query: 285 WASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVA 343
V A I L G+VLG Q++V+ G+H L A L G +
Sbjct: 282 TVESYVLAGTEWILALPFGLAGLVLGGIHQIIVVTGVHHVFNLLEANLISNTGKDPLNAI 341
Query: 344 SIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCI 403
A AQAGA L + ++TK+ K++ L+ PA +SA+ G+TEPAI+G+ L PFIM I
Sbjct: 342 ITAAMTAQAGATLAVGVKTKDSKLKALAFPASLSAVLGITEPAIFGVNLRFGKPFIMGLI 401
Query: 404 SGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLI 463
+GA G + ++ G G+ +P + N L ++I ++ LGF LT +
Sbjct: 402 AGAAGGWLASILNLAGT---GFGVTIVPGTLLYLNGQVL-KYVIMVLVTLALGFALTWI- 456
Query: 464 KIPNLFGGPSEKDAAESLDSEKERVSAG-----ITEQVVTSPLAGEVVALEDTPDAVFAS 518
FG E+ A++ ++ SAG + + + +PL GEVVALE+ D VF+S
Sbjct: 457 -----FGYKEEEVEAQTEVVAEDIASAGSAPVALQAETIAAPLKGEVVALENVNDPVFSS 511
Query: 519 GAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGF 578
GAMGKG AI+PS VVAP DG +++ FPT HA GL +D GAE+LIH+G+DTV+LDGKGF
Sbjct: 512 GAMGKGAAIKPSGNRVVAPFDGEVQIAFPTGHAYGLKSDKGAEVLIHIGIDTVSLDGKGF 571
Query: 579 TAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQL 638
A V +VKKG +L +FD I EAG TT +IVTNTA+Y+ + +A G + G+
Sbjct: 572 DAKVQANQRVKKGDVLATFDSSVITEAGLDDTTMVIVTNTADYEDVSSVATGSVAEGDDF 631
Query: 639 LELK 642
+ +K
Sbjct: 632 IAVK 635
>gi|73661432|ref|YP_300213.1| putative phosphotransferase system IIABC component [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|72493947|dbj|BAE17268.1| putative phosphotransferase system IIABC component [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 528
Score = 295 bits (754), Expect = 8e-78, Method: Composition-based stats.
Identities = 196/563 (34%), Positives = 314/563 (55%), Gaps = 43/563 (7%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y L K+I+ VGG++NI+ L HC TRLRF LKD +AD + + V+ VV+ GGQ+
Sbjct: 2 NYDNLGKEIIDLVGGENNISSLEHCATRLRFVLKDTDQADNSKINELPKVLQVVEQGGQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
Q+VIGN V +VY+ ++K I G+ ++++ + N+ + + +SG F P+L L+ +
Sbjct: 62 QIVIGNDVANVYDAIVKNYSI-GQTYAKEENESGKRNIINIIFSYISGTFSPLLPALAGS 120
Query: 124 GMIKGVVAIMAALGVAKTDGA-YVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
GM+K ++ I+ +L GA + +LNA +G+F FLP+ + ++A+K+ +N + I
Sbjct: 121 GMLKALLEILKSLNWINDKGATFAILNATSNGVFYFLPIFIGMSASKKLNVNPYIGGVIA 180
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
+L+ P+ +E+ L TF GLP++ + + STV P++ A+
Sbjct: 181 ASLLEPSFTNLLKSEENL---------------TFIGLPLV--VTDFASTVFPLLIAIAI 223
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSP 302
A +E+ K+ +P V+++F+VP +L+I VPL LV GP + S +G + + FS
Sbjct: 224 YAPLERLLKRWVPKVLQLFLVPMLSLIIMVPLTVLVFGPFSEYVSSGIGIDY--MPGFSR 281
Query: 303 VLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAICFAQAGALLNIMMRT 362
+L G+++ + W LV+ G+HWGLVP+ I G + + + A FAQ G +++R+
Sbjct: 282 ILTGVIIASFWPFLVVLGVHWGLVPIMIDNFAHGGDIFIAITAASVFAQIGIAFGVVLRS 341
Query: 363 KEEK-VRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQ 420
+ K +R LSI +S L GVTEP +YG+ L + + +SGA+ GA +A FDV++
Sbjct: 342 RRNKDLRSLSIGTTLSGLLAGVTEPILYGLILWYKRLIPIVLVSGAIGGAIIAIFDVRVT 401
Query: 421 VMGGMGLFAIPSF--IEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEK--D 476
LF IP F I I +I + FV GF SEK +
Sbjct: 402 TFVLNNLFIIPVFKPIYGYILGIAIALIIGTILTFVFGFEAKN-----------SEKPLE 450
Query: 477 AAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVA 536
A E+ ++ +E S ++ +PL+GE+V LE+ PD VF++ AMGKG+AIEP V A
Sbjct: 451 AKENTNNLQEGAST-----MIFAPLSGEIVKLENAPDPVFSTEAMGKGIAIEPENDTVYA 505
Query: 537 PADGVIRLLFPTNHAIGLATDDG 559
P DGV+ +F T HAIG G
Sbjct: 506 PFDGVVETIFNTKHAIGFEVMKG 528
>gi|116628430|ref|YP_821049.1| sucrose PTS, EIIBCA [Streptococcus thermophilus LMD-9]
gi|116101707|gb|ABJ66853.1| sucrose PTS, EIIBCA [Streptococcus thermophilus LMD-9]
Length = 633
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 223/661 (33%), Positives = 334/661 (50%), Gaps = 51/661 (7%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y ++AK+++ +GG++N+ + HC TRLR +KDE+K + + + V GQY
Sbjct: 2 NYKQIAKEVIEALGGRENVNSVAHCATRLRVMVKDENKINKEKAENIEKVQGAFFNSGQY 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
Q++ G V +Y+ V+ + + A +GN F R I +F P+L + A
Sbjct: 62 QMIFGTGTVNKIYDEVVAQGLPTASKDEQKAEAAKQGNWFQRAIRSFGDVFVPLLPAIVA 121
Query: 123 AGMIKGVVA------IMAALGV-----AKTDGAYVVLNAAGDGLFQFLPLILAITAAKRF 171
G+ G+ ++A G A TD Y D F F P ++ +A F
Sbjct: 122 TGLFMGIRGAINNDTVLALFGTTSKAFAATD-FYTYTVVLTDTAFAFFPALICWSAFNVF 180
Query: 172 KMNQFTALAIGFAL---VYPNIAASFT-AEKPLYTLFAGTPIESPIFSTFFGLPIIFPAS 227
+ L +G + PN + A KP+Y FF P
Sbjct: 181 GGSPLLGLVLGLMMVNNALPNAWDVVSGAAKPIY---------------FFDF---IPVV 222
Query: 228 SYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWAS 287
Y ++VLP GAK E+ +K +PDV+ + + P + LA +IGPV
Sbjct: 223 GYQNSVLPAFFVGLIGAKFEQWVRKWVPDVLDLLLRPLVVFAVMSALALFIIGPVFHTVE 282
Query: 288 DLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIA 346
V A I L G+VLG Q++V+ G+H L A L G + A
Sbjct: 283 SYVLAGTEWILALPFGLAGLVLGGIHQIIVVTGVHHVFNLLEANLISNTGKDPLNAIITA 342
Query: 347 ICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGA 406
AQAGA L + ++TK+ K++ L+ PA +SA+ G+TEPAI+G+ L PFIM I+GA
Sbjct: 343 AMTAQAGATLAVGVKTKDSKLKALAFPASLSAVLGITEPAIFGVNLRFGKPFIMGLIAGA 402
Query: 407 LTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIP 466
G + ++ G G+ +P + N L ++I ++ LGF LT +
Sbjct: 403 AGGWLASILNLAGT---GFGVTIVPGTLLYLNGQVL-KYVIMVLVTLTLGFALTWI---- 454
Query: 467 NLFGGPSEKDAAESLDSEKERVSAG-----ITEQVVTSPLAGEVVALEDTPDAVFASGAM 521
FG E+ A++ ++ SAG + + + +PL GEVVALE+ D VF+SGAM
Sbjct: 455 --FGYKEEEVEAQTEVVAEDIASAGSAPVALQAETIAAPLKGEVVALENVNDPVFSSGAM 512
Query: 522 GKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAH 581
GKG AI+PS VVAP DG +++ FPT HA GL +D GAE+LIH+G+DTV+LDGKGF A
Sbjct: 513 GKGSAIKPSGNRVVAPFDGEVQIAFPTGHAYGLKSDKGAEVLIHIGIDTVSLDGKGFDAK 572
Query: 582 VVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
V +VKKG +L +FD I EAG TT +IVTNTA+Y+ + +A G + G+ + +
Sbjct: 573 VQANQRVKKGDVLATFDSSVITEAGLDDTTMVIVTNTADYEDVSSVATGSVAEGDDFIAV 632
Query: 642 K 642
K
Sbjct: 633 K 633
>gi|148984166|ref|ZP_01817461.1| PTS system, IIABC component [Streptococcus pneumoniae SP3-BS71]
gi|148997777|ref|ZP_01825341.1| PTS system, IIABC component [Streptococcus pneumoniae SP11-BS70]
gi|147756276|gb|EDK63318.1| PTS system, IIABC component [Streptococcus pneumoniae SP11-BS70]
gi|147923455|gb|EDK74568.1| PTS system, IIABC component [Streptococcus pneumoniae SP3-BS71]
Length = 645
Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 220/670 (32%), Positives = 337/670 (50%), Gaps = 58/670 (8%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY+++A +++ VG KDN+ HC TRLR LKDE+K + L V GQY
Sbjct: 2 DYSKVAAEVIEAVG-KDNLVAAAHCATRLRLVLKDEAKVNQAALDNNADVKGTFSTNGQY 60
Query: 64 QVVIG-NHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFD---RFIALVSGLFQPMLGT 119
Q++IG V VY ++K G+ + D + A + F+ I L+S +F P++
Sbjct: 61 QIIIGPGDVNFVYAEIIKKTGLKEVSTDDLKEIANKDKKFNPLMDLIKLLSDIFVPIIPA 120
Query: 120 LSAAGMIKGVVAIMAA---LGVAKTDGAY-------VVLNAAGDGLFQFLPLILAITAAK 169
L A G++ + + + G + Y ++ F FLP+++ I+AAK
Sbjct: 121 LVAGGLLMALRNFLTSPDLFGPQSIEDMYPAIKGFSAMIQLMSAAPFMFLPVLVGISAAK 180
Query: 170 RFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSY 229
RF NQF AIG + P++ F G + ++Y
Sbjct: 181 RFGANQFLGAAIGMIMTTPDLGGK------------------EAFWDILGFHVT--QTNY 220
Query: 230 LSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDL 289
V+PV+ AVW A +EK F K +P V P +++IT L F VIGPVM SD
Sbjct: 221 AYQVIPVLVAVWLLANLEKFFHKKLPSAVDFTFTPLLSVMITGFLTFTVIGPVMLVVSDA 280
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK--------GPGVIL 341
+ +Y+ + + G + ++VM GLH + L G + +
Sbjct: 281 ITNAIVWLYNTTGAFGMGLFGGTYSLIVMTGLHQSFPAIETQLLSAYNNNGTGFGDYIFV 340
Query: 342 VASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMT 401
VAS+A AQ A L + TK K + LS A +SA G+TEPA++G+ L + PF
Sbjct: 341 VASMA-NVAQGAATLAVYFLTKNAKTKGLSSSAAVSAFLGITEPALFGVNLKYKFPF-FC 398
Query: 402 CISGALTGAYLAFFDVKMQV-MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLT 460
++G+ GA++A + V +G G S S M ++IA + +FV F T
Sbjct: 399 ALAGSAIGAFVAGLTHVIAVSLGAAGFIGFLSIKAGSIPM----YIIAEIMSFVAAFAFT 454
Query: 461 QL---IKIPNLFG-----GPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTP 512
K ++F +E ++++ + + + + +P+ G+VVAL D
Sbjct: 455 YFYGKTKAASVFADEAATATAETVTEPTVEAPVVEETDTLQNETLVTPIVGDVVALADVN 514
Query: 513 DAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVA 572
D VF+SGAMG+G+A++PS G V APAD + + FPT HA GL T +GAE+LIHVG+DTV+
Sbjct: 515 DPVFSSGAMGQGIAVKPSQGVVYAPADAEVSIAFPTGHAFGLKTRNGAEVLIHVGIDTVS 574
Query: 573 LDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEI 632
++G GF A V QG+KVK G +L +FD + I AG TT +IVTNTA+Y + +A G +
Sbjct: 575 MNGDGFEAKVAQGNKVKAGDVLGTFDSNKIAAAGLDDTTMVIVTNTADYASVAPVATGSV 634
Query: 633 QLGNQLLELK 642
GN ++E+K
Sbjct: 635 AKGNAVIEVK 644
>gi|146317887|ref|YP_001197599.1| Phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus suis 05ZYH33]
gi|146320075|ref|YP_001199786.1| Phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus suis 98HAH33]
gi|145688693|gb|ABP89199.1| Phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus suis 05ZYH33]
gi|145690881|gb|ABP91386.1| Phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus suis 98HAH33]
Length = 664
Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats.
Identities = 219/653 (33%), Positives = 322/653 (49%), Gaps = 52/653 (7%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AK ++ +GGK+N+ + HC TR+RF L DE KA+ + V GQ+Q
Sbjct: 4 FEKEAKQLLEAIGGKENVNAVTHCATRMRFVLADEKKANVKVIEDIPAVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N R + +++ +F P++ L
Sbjct: 64 VIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNAIQRVMTMLAEIFTPIIPALIVG 123
Query: 124 GMIKGVVAI-----MAALGVAKTDGAYVV------------------------LNAAGDG 154
G+I G + M LG A DG V L G+
Sbjct: 124 GLILGFRNVLEGVQMEWLGQAMKDGQLVFDADGNPVWNTIVQVSPFWNGVNHFLWLPGEA 183
Query: 155 LFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIF 214
+F FLP+ + + +++ +Q + +G LV P + ++ A +
Sbjct: 184 IFHFLPVGITWSVSRKMGTSQILGIVLGICLVSPQLLNAYAVPGTDAATIASD------W 237
Query: 215 STFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPL 274
S FG I Y + V+P + A A + +E ++K++P+VV + VPF +LL + L
Sbjct: 238 SWNFGAFSI-ARIGYQAQVIPALLAGLALSYLEIFWRKVVPEVVSMIFVPFLSLLPAIIL 296
Query: 275 AFLVIGPVM----SWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAI 330
A V+GP+ W S +V A TG + L+G V GA + V+ GLH +
Sbjct: 297 AHTVLGPIGWTIGQWLSTVVLAGLTGPLKW---LFGAVFGALYAPFVITGLHHMTNAIDT 353
Query: 331 LELQKGPGVILVASIAIC-FAQAGALLN-IMMRTKEEKVRQLSIPAFISALFGVTEPAIY 388
+ G L IA+ AQ A+ +M K EK Q+S+PA ISA GVTEPA++
Sbjct: 354 QLIADAGGTGLWPMIALSNIAQGSAVFAYFLMNRKNEKEAQVSLPATISAYLGVTEPALF 413
Query: 389 GITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIA 448
G+ + PF+ I ++ G F+++ +G GL I S + ++A
Sbjct: 414 GVNVKYIYPFVAAMIGSSIAGLLSVTFNIQAASIGIGGLPGILSIKAEYWGAFFMTMVVA 473
Query: 449 IVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVAL 508
IV +L T + K F E+ E + + V G +++ SPL G+ L
Sbjct: 474 IVVPMIL----TAVFKRTGAFS-KKEETVEEVVAPTEAVVETGAAIELI-SPLTGQTKEL 527
Query: 509 EDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGM 568
D VFASG MG+GV I+PS G +VAP DG + +LFPTNHA+G+ +G ELL+H+GM
Sbjct: 528 SQATDPVFASGVMGQGVLIDPSEGILVAPVDGEVSVLFPTNHAVGITATNGVELLMHIGM 587
Query: 569 DTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
DTV L+GKGFTAHV QG KVK G L+SFDID IK AG TP+IVTN ++
Sbjct: 588 DTVGLEGKGFTAHVKQGDKVKAGDKLISFDIDVIKAAGLIAETPVIVTNQTDF 640
>gi|149011411|ref|ZP_01832658.1| PTS system, IIABC component [Streptococcus pneumoniae SP19-BS75]
gi|147764401|gb|EDK71332.1| PTS system, IIABC component [Streptococcus pneumoniae SP19-BS75]
Length = 645
Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats.
Identities = 219/670 (32%), Positives = 337/670 (50%), Gaps = 58/670 (8%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY+++A +++ VG KDN+ HC TRLR LKDE+K + L V GQY
Sbjct: 2 DYSKVAAEVIEAVG-KDNLVAAAHCATRLRLVLKDEAKVNQAALDNNADVKGTFSTNGQY 60
Query: 64 QVVIG-NHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFD---RFIALVSGLFQPMLGT 119
Q++IG V VY ++K G+ + D + A + F+ I L+S +F P++
Sbjct: 61 QIIIGPGDVNFVYAEIIKKTGLKEVSTDDLKEIANKDKKFNPLMDLIKLLSDIFVPIIPA 120
Query: 120 LSAAGMIKGVVAIMAA---LGVAKTDGAY-------VVLNAAGDGLFQFLPLILAITAAK 169
L A G++ + + + G + Y ++ F FLP+++ I+AAK
Sbjct: 121 LVAGGLLMALRNFLTSPDLFGPQSIEDMYPAIKGFSAMIQLMSAAPFMFLPVLVGISAAK 180
Query: 170 RFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSY 229
RF NQF AIG + P++ F G + ++Y
Sbjct: 181 RFGANQFLGAAIGMIMTTPDLGGK------------------EAFWDILGFHVT--QTNY 220
Query: 230 LSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDL 289
V+PV+ AVW A +EK F K +P V P +++IT L F VIGPVM SD
Sbjct: 221 AYQVIPVLVAVWLLANLEKFFHKKLPSAVDFTFTPLLSVMITGFLTFTVIGPVMLVVSDA 280
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK--------GPGVIL 341
+ +Y+ + + G + ++VM GLH + L G + +
Sbjct: 281 ITNAIVWLYNTTGAFGMGLFGGTYSLIVMTGLHQSFPAIETQLLSAYNNNGTGFGDYIFV 340
Query: 342 VASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMT 401
VAS+A AQ A L + TK K + LS A +SA G+TEPA++G+ L + PF
Sbjct: 341 VASMA-NVAQGAATLAVYFLTKNAKTKGLSSSAAVSAFLGITEPALFGVNLKYKFPF-FC 398
Query: 402 CISGALTGAYLAFFDVKMQV-MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLT 460
++G+ GA++A + V +G G S S M ++IA + +FV F T
Sbjct: 399 ALAGSAIGAFVAGLTHVIAVSLGAAGFIGFLSIKAGSIPM----YIIAEIMSFVAAFAFT 454
Query: 461 QL---IKIPNLFG-----GPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTP 512
K ++F +E ++++ + + + + +P+ G+VVAL D
Sbjct: 455 YFYGKTKAASVFADEAATATAETVTEPTVEAPVVEETDTLQNETLVTPIVGDVVALADVN 514
Query: 513 DAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVA 572
D VF+SGAMG+G+A++PS G V APAD + + FPT HA GL T +GAE+LIHVG+DTV+
Sbjct: 515 DPVFSSGAMGQGIAVKPSQGVVYAPADAEVSIAFPTGHAFGLKTRNGAEVLIHVGIDTVS 574
Query: 573 LDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEI 632
++G GF A V QG+KVK G +L +FD + I AG TT +IVTNTA+Y + +A G +
Sbjct: 575 MNGDGFEAKVAQGNKVKAGDVLGTFDSNKIAAAGLDDTTMVIVTNTADYASVAPVATGSV 634
Query: 633 QLGNQLLELK 642
G+ ++E+K
Sbjct: 635 AKGDAVIEVK 644
>gi|81177165|ref|ZP_00876037.1| Sugar-specific permease, EIIA 1 domain:PTS system, sucrose-specific
IIBC component:PTS system, glucose-like IIB component
[Streptococcus suis 89/1591]
gi|80976162|gb|EAP39803.1| Sugar-specific permease, EIIA 1 domain:PTS system, sucrose-specific
IIBC component:PTS system, glucose-like IIB component
[Streptococcus suis 89/1591]
Length = 648
Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 224/670 (33%), Positives = 325/670 (48%), Gaps = 53/670 (7%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +++ +++ VG KDN+ HC TRLR LKDESK + L V GQY
Sbjct: 2 DYKKVSAEVIEAVG-KDNLVAAAHCATRLRLVLKDESKVNQKALDDNADVKGTFSTNGQY 60
Query: 64 QVVIG-NHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFD---RFIALVSGLFQPMLGT 119
QV+IG V VY ++K G+ + D A + F+ I L+S +F P++
Sbjct: 61 QVIIGPGDVNFVYAELIKATGLKEVSTDDLKQIAAQDKKFNPLMDLIKLLSDIFVPIIPA 120
Query: 120 LSAAGMIKGVVAIMAALGV----------AKTDGAYVVLNAAGDGLFQFLPLILAITAAK 169
L A G++ + + + + G ++ F FLP+++ I+AAK
Sbjct: 121 LVAGGLLMALRNFLTSPDLFGPKSIEEMYPAIQGISAMIQLMSAAPFMFLPVLVGISAAK 180
Query: 170 RFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSY 229
RF NQF AIG + P++ F FG + ++Y
Sbjct: 181 RFGANQFLGAAIGMIMTTPDLGGK------------------EAFWDIFGFQV--AQTNY 220
Query: 230 LSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDL 289
V+PV+AAVW A +EK F K +P V P +++IT L F VIGPVM SD
Sbjct: 221 AYQVIPVLAAVWLLATLEKFFHKKLPSAVDFTFTPLLSVMITGFLTFTVIGPVMLTVSDA 280
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK--------GPGVIL 341
+ +YD + L + G + ++VM GLH + L G + +
Sbjct: 281 ITNAIVWLYDTTGALGMSIFGGTYSLIVMTGLHQSFPAIETQLLSAYNNNGTGYGDYIFV 340
Query: 342 VASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMT 401
VAS+A AQ A L I TK K + LS A +SA G+TEPA++G+ L R PF
Sbjct: 341 VASMA-NVAQGAATLAIYFLTKNAKTKGLSGSAAVSAFLGITEPALFGVNLKYRFPFFCA 399
Query: 402 CISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQ 461
A+ + V +G G S +S M ++ +IA A F + +
Sbjct: 400 LAGSAIGALFAGLTHVIAVSLGAAGFIGFLSIKASSIPMYVVAEVIAFAAAFASTYVYGK 459
Query: 462 LIKIPNLFGGPSEKDAAESLDSEKERVSAG--------ITEQVVTSPLAGEVVALEDTPD 513
K +F + AA ++ + S ++ + SPL+G+VVALE+ D
Sbjct: 460 -TKASAVFADEAATAAAAAVTASVVETSEEVEETAEIFTAQETLVSPLSGDVVALENVND 518
Query: 514 AVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVAL 573
VF+SGAMGKG+A++PS G V APAD + + F T HA GL T GAELLIH+G+DTV++
Sbjct: 519 PVFSSGAMGKGLAVKPSEGVVYAPADAEVTIAFETGHAYGLKTASGAELLIHIGIDTVSM 578
Query: 574 DGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQ 633
+G GF V G KVK G + FD I EAG TT IIVTNTA++ ++ LA+G I
Sbjct: 579 NGNGFEKLVAAGDKVKAGTPIAKFDATKIAEAGLDDTTMIIVTNTADFAEVSPLAEGTIA 638
Query: 634 LGNQLLELKK 643
G + L++ K
Sbjct: 639 HGVEFLKVAK 648
>gi|125718551|ref|YP_001035684.1| Phosphotransferase system, trehalose-specific IIBC component,
putative [Streptococcus sanguinis SK36]
gi|125498468|gb|ABN45134.1| Phosphotransferase system, trehalose-specific IIBC component,
putative [Streptococcus sanguinis SK36]
Length = 687
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 222/674 (32%), Positives = 345/674 (51%), Gaps = 58/674 (8%)
Query: 9 AKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIG 68
AKD++ +GGK+N+T + HC TR+RF L D+ KA+ + V GQ+QV+IG
Sbjct: 30 AKDLLDAIGGKENVTAVSHCATRMRFVLGDDKKANVKAIETIPVVKGTFTNAGQFQVIIG 89
Query: 69 NHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLSAAGMIK 127
N VP Y V+GI G A A + N R +A ++ +F P++ L G+I
Sbjct: 90 NDVPIFYNDFTAVSGIEGVSKEAAKSAAKSKQNPLQRVMATLAEIFTPIIPALIVGGLIL 149
Query: 128 GVVAIMAALGVAKTDGAYVV------------LNAAGDGLFQFLPLILAITAAKRFKMNQ 175
G ++ + + DG + L G+ +FQFLP+ + + +++ +Q
Sbjct: 150 GFRNVLEGVHWSMLDGKTITEVSKFWSGINHFLWLPGEAIFQFLPVGITWSVSRKMGTSQ 209
Query: 176 FTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIE--SPIFSTFFGLPIIFPASSYLSTV 233
+ +G LV P + +++ A TP + + FG Y + V
Sbjct: 210 ILGIVLGICLVSPQLLNAYSV--------ASTPAAEIAKDWVWDFGF-FTVNRVGYQAQV 260
Query: 234 LPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWA-----SD 288
+P + A + + +E ++K IP+VV + VPF +L+ + LA V+GP+ W S
Sbjct: 261 IPALLAGLSLSYLEIFWRKHIPEVVSMIFVPFLSLIPALILAHTVLGPI-GWTIGQGIST 319
Query: 289 LVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC 348
+V A TG + L+G V GA + V+ GLH + + G L IA+
Sbjct: 320 VVLAGLTGPVKW---LFGAVFGALYAPFVITGLHHMTNAIDTQLVADAGGTGLWPMIALS 376
Query: 349 -FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGA 406
AQ A+ +M+ +E+ Q+S+PA ISA GVTEPA++G+ + PF+ I +
Sbjct: 377 NIAQGSAVFAYYLMKRHDEREAQISLPATISAYLGVTEPALFGVNVKYVYPFVAGMIGSS 436
Query: 407 LTGAYLAFFDVKMQVMGGMGLFAIPS----FIEASNSMTLIHFLIAIVANFVL---GFGL 459
+ G F++ +G GL I S ++ + L+ L+ + F GF L
Sbjct: 437 IAGLLSVTFNITANAIGIGGLPGILSIQAKYMIPFAGVMLVAILVPMFLTFFFHKTGF-L 495
Query: 460 TQLIKIPNL---------FGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALED 510
T+ + P L A S + + +SA +T +TSPLAGEV L
Sbjct: 496 TKNEEDPELKAEFAALEEAEFAGTSKAESSPEVQAADLSAPVT---ITSPLAGEVKELSQ 552
Query: 511 TPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDT 570
D VFA G MG+GV I PS GE+V+P +G + + FPT HAIG+ +D+G E+L+H+GMDT
Sbjct: 553 ATDPVFAQGLMGRGVVIVPSQGELVSPVNGRVTVFFPTKHAIGILSDEGVEILMHIGMDT 612
Query: 571 VALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYK--QIEVLA 628
V L+GKGF V QG KVK G L+SFDID IK+AGY TP+I+TN+ +Y+ ++E L
Sbjct: 613 VNLEGKGFEGFVSQGDKVKAGDKLISFDIDMIKKAGYVTETPVIITNSDSYQVEELEQLP 672
Query: 629 KGEIQLGNQLLELK 642
+ ++ G+QL+ K
Sbjct: 673 RA-VKRGSQLMNAK 685
>gi|116617417|ref|YP_817788.1| sucrose PTS, EIIBCA [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|116096264|gb|ABJ61415.1| sucrose PTS, EIIBCA [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
Length = 653
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 220/661 (33%), Positives = 336/661 (50%), Gaps = 49/661 (7%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D+ ++AK I VG KDNI HC TRLR +KD K D D L + A GQY
Sbjct: 2 DHNKVAKRIADAVG-KDNIVAAAHCATRLRLVIKDVKKIDQDALDNDSDLKGTFNANGQY 60
Query: 64 QVVIG-NHVPDVYETVLKVAGISGEGSVDADDDAVEG---NLFDRFIALVSGLFQPMLGT 119
Q+++G V VY+ +K+ G+ + D A + N + ++S +F P++
Sbjct: 61 QIIVGPGDVNGVYDEFVKITGVEQASTADLKKIAAQSGKRNPLMDLVKVLSDIFVPLIPA 120
Query: 120 LSAAGMIKGVVAIMAALGV----------AKTDGAYVVLNAAGDGLFQFLPLILAITAAK 169
L A G++ + I+ G+ + G ++N F FLP+++ ITA +
Sbjct: 121 LVAGGLLMALNNILTGEGMFGAKSLVEMFPQITGLAEMINLMASAPFAFLPILIGITATR 180
Query: 170 RFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSY 229
RF N+ A G LV P++ + + + T + P + FGL + + Y
Sbjct: 181 RFGGNEILGAAAGMMLVMPSLVNGYNVAEAVATG------KMPTWD-LFGLSV--AQAGY 231
Query: 230 LSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASD- 288
VLPVI + A +EK F K + + P ++++T + F+V+GPV+ S+
Sbjct: 232 QGQVLPVIGVAFILANLEKFFHKHLKGAIDFTFTPMLSIILTGFITFIVVGPVLRIVSNG 291
Query: 289 LVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL----QKGPGVILVAS 344
+ +L + F + YG V G + +V+ GLH + L + G I +
Sbjct: 292 ITDSLTWLVTTFGFIGYG-VFGTFYSAIVITGLHQSFPAIETQLLADVAKTGGDFIFPIA 350
Query: 345 IAICFAQAGALLNIMMRTK-EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCI 403
A AQ A I +K +EKVR L+ + SA+ G+TEPA++G+ L + PF +
Sbjct: 351 AASNVAQGAATFAIYFLSKGDEKVRALASSSGASAMLGITEPAMFGVNLKYKFPFFIALG 410
Query: 404 SGALTGAYLAFFDVKMQVMGG---MGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLT 460
S ++ + F V +G +G AIP+ + F IAI +FV+ F T
Sbjct: 411 SAGISSLVMGLFQVMSSSLGPAGIIGFIAIPA-------NKWVGFFIAIALSFVIAFTAT 463
Query: 461 QLIKIPNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGA 520
++ S A + +E E AG V +P++G ++ L D PD VF++G
Sbjct: 464 LAYGRSHMPVSKSGNRLANPVVTEHE---AGFE---VDAPVSGHLIPLADVPDNVFSTGM 517
Query: 521 MGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTA 580
MGKGVAIEPS G + APADG I + + T HA GL TDDG E+LIH+G+DTV L+G+GF +
Sbjct: 518 MGKGVAIEPSDGTIYAPADGEITVAYQTKHAYGLTTDDGVEILIHIGLDTVNLEGQGFES 577
Query: 581 HVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEV--LAKGEIQLGNQL 638
V QG KVKKG L +FD +TIK+AGYPVTT +I+TNT + + V +IQ G+Q+
Sbjct: 578 FVTQGQKVKKGDKLGTFDTNTIKKAGYPVTTMVIITNTKAFNDVAVDEAFDNDIQAGHQI 637
Query: 639 L 639
+
Sbjct: 638 I 638
>gi|90961054|ref|YP_534970.1| PTS system, sucrose-specific IIABC component [Lactobacillus
salivarius subsp. salivarius UCC118]
gi|90820248|gb|ABD98887.1| PTS system, sucrose-specific IIABC component [Lactobacillus
salivarius subsp. salivarius UCC118]
Length = 644
Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 220/665 (33%), Positives = 343/665 (51%), Gaps = 56/665 (8%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D+ ++AK++V VG +DN+ HC TRLR LKD+ K + L V K GQY
Sbjct: 2 DHKKVAKNVVDAVG-RDNLIAAAHCATRLRLVLKDDKKVNQAALDADPDVKGTFKTNGQY 60
Query: 64 QVVIG-NHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFD---RFIALVSGLFQPMLGT 119
QV+IG V +VY+ ++K G+ + D A +G F+ FI L+S +F P++
Sbjct: 61 QVIIGPGDVNNVYDELIKDTGLKELSTDDLKKVAEQGQKFNPVMAFIKLLSDIFVPIIPA 120
Query: 120 LSAAGMIK------------GVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITA 167
L A G++ G +I++ V K + L +A F F+P+++AI+A
Sbjct: 121 LVAGGLLMALNNFLTQPGLFGPKSIVSTSPVIKGLSDMIQLMSAAP--FIFMPILVAISA 178
Query: 168 AKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPAS 227
+KRF N+F AIG + P++ ++ + FG+ + +
Sbjct: 179 SKRFGANRFLGAAIGMIMTSPDLG------------------KTAKYWDIFGMHV--AQT 218
Query: 228 SYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWAS 287
+Y V+PVIAAVW A +EK F K +P V P +++IT L F VIGPV+ S
Sbjct: 219 NYAYQVIPVIAAVWVLAFLEKRFHKWLPAAVDFTFTPLLSVMITGFLTFTVIGPVLKTVS 278
Query: 288 DLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLA---ILELQKGPG----VI 340
D++ +YD + + + G + +VM GLH + + G G +
Sbjct: 279 DMLTNGIVWLYDTTSFVGMGIFGLTYSAIVMTGLHQSFPAIETQLVTAFANGHGAGDFIF 338
Query: 341 LVASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIM 400
+VAS+A AQ A I TK++K++ LS A +SAL G+TEPA++G+ L + PF
Sbjct: 339 VVASMA-NVAQGAATFAIYFLTKDKKMKGLSSSAGVSALLGITEPALFGVNLKYKFPFFC 397
Query: 401 TCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSM----TLIHFLIAIVANFVLG 456
I + A+ + MG G S S M LI F +A + F+ G
Sbjct: 398 ALIGSGVAAAFAGLMHIIAASMGAAGFIGFLSIYPKSIPMYVVAELISFAVAFILTFIYG 457
Query: 457 FGLTQLIKIPNLFGGPSEKDAAESLDSEKERVSA--GITEQVVTSPLAGEVVALEDTPDA 514
G + ++ + S +AAE+ +E+V+A + ++VV +P++GE L D D
Sbjct: 458 KGHMKEEQVAPVV---SASEAAETEAKVEEQVAAESKLNDEVVAAPISGESKKLTDVNDP 514
Query: 515 VFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALD 574
VF++ AMG G A+ P+ G + AP DG + + + T HA GL +D+GAE+LIHVG+DTV L
Sbjct: 515 VFSTLAMGNGAAVVPTDGTIYAPVDGELTVAYETKHAYGLKSDNGAEVLIHVGIDTVNLK 574
Query: 575 GKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
G+ F + V QG KVKKG L + D+D +K AGY T ++VTNT NY ++ + ++
Sbjct: 575 GQHFESFVKQGQKVKKGDKLGTVDLDAVKAAGYDTTVMVVVTNTMNYASVDRIDNTKVNH 634
Query: 635 GNQLL 639
G+ L+
Sbjct: 635 GDDLV 639
>gi|149006609|ref|ZP_01830308.1| PTS system IIABC component [Streptococcus pneumoniae SP18-BS74]
gi|149020803|ref|ZP_01835332.1| PTS system IIABC component [Streptococcus pneumoniae SP23-BS72]
gi|147761907|gb|EDK68870.1| PTS system IIABC component [Streptococcus pneumoniae SP18-BS74]
gi|147930444|gb|EDK81427.1| PTS system IIABC component [Streptococcus pneumoniae SP23-BS72]
Length = 627
Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 207/640 (32%), Positives = 333/640 (52%), Gaps = 22/640 (3%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVV 66
E+AK ++ +GG++N+ + HC TRLR +KDE K + + + + V GQYQ++
Sbjct: 5 EIAKKVIDALGGRENVNSVAHCATRLRVMVKDEEKINKEVIENLEKVQGAFFNSGQYQII 64
Query: 67 IGN-HVPDVYETVLKVAGISGEGSVDADDD-AVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
G V +Y+ V+ V G+ D + A +GN F R I +F P++ + A G
Sbjct: 65 FGTGTVNKMYDEVV-VLGLPTSSKDDMKAEVAKQGNWFQRAIRTFGDVFVPIIPVIVATG 123
Query: 125 MIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+ GV + AL + D F LP ++ + + F N + +G
Sbjct: 124 LFMGVRGLFNALEMPLPGDFATYTQILTDTAFIILPGLVVWSTFRVFGGNPAVGIVLGMM 183
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV ++ ++ + G + + FFG P +VLP GA
Sbjct: 184 LVSGSLPNAWAVAQ-------GGEVTA---MNFFGF---IPVVGLQGSVLPAFIIGVVGA 230
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
K EK +K++PDV+ + + PF TLL+ L VIGPV + + I L
Sbjct: 231 KFEKAVRKVVPDVIDLLVTPFVTLLVMSILGLFVIGPVFHVVENYILIATKAILSIPFGL 290
Query: 305 YGIVLGAAWQVLVMFGLH--WGLVPLAILELQKGPGVILVASIAICFAQAGALLNIMMRT 362
G ++G Q++V+ G+H + L+ + +L + + A+ AQ A + + ++T
Sbjct: 291 GGFLIGGVHQLIVVSGVHHIFNLLEVQLLAADHANPFNAIITAAMT-AQGAATVAVGVKT 349
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
K K++ L+ PA +SA G+TEPAI+G+ L R PF ++ I+GA+ G + +
Sbjct: 350 KNPKLKTLAFPAALSAFLGITEPAIFGVNLRFRKPFFLSLIAGAIGGGLASILGLAGT-- 407
Query: 423 GGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLD 482
G G+ IP + + L +L+ + +F LGF LT + + + AE +
Sbjct: 408 -GNGITIIPGTMLYVGNGQLPQYLLMVAVSFALGFALTYMFGYEDEVDATAAAKQAEVAE 466
Query: 483 SEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVI 542
++E A + + + +P+ G+VVAL D D VF+SGAMG+G+A++PS G V APAD +
Sbjct: 467 EKEEVAPAALQNETLVTPIVGDVVALADVNDPVFSSGAMGQGIAVKPSQGVVYAPADAEV 526
Query: 543 RLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTI 602
+ FPT HA GL T +GAE+LIHVG+DTV+++G GF A V QG+KVK G +L +FD + I
Sbjct: 527 SIAFPTGHAFGLKTRNGAEVLIHVGIDTVSMNGDGFEAKVAQGNKVKAGDVLGTFDSNKI 586
Query: 603 KEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
AG TT +IVTNTA+Y + +A G + G+ ++E+K
Sbjct: 587 AAAGLDDTTMVIVTNTADYASVAPVATGSVAKGDAVIEVK 626
>gi|149002025|ref|ZP_01826979.1| PTS system IIABC component [Streptococcus pneumoniae SP14-BS69]
gi|147759834|gb|EDK66824.1| PTS system IIABC component [Streptococcus pneumoniae SP14-BS69]
Length = 627
Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 207/640 (32%), Positives = 333/640 (52%), Gaps = 22/640 (3%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVV 66
E+AK ++ +GG++N+ + HC TRLR +KDE K + + + + V GQYQ++
Sbjct: 5 EIAKKVIDALGGRENVNSVAHCATRLRVMVKDEEKINKEVIENLEKVQGAFFNSGQYQII 64
Query: 67 IGN-HVPDVYETVLKVAGISGEGSVDADDD-AVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
G V +Y+ V+ V G+ D + A +GN F R I +F P++ + A G
Sbjct: 65 FGTGTVNKMYDEVV-VLGLPTSSKDDMKAEVAKQGNWFQRAIRTFGDVFVPIIPVIVATG 123
Query: 125 MIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+ GV + AL + D F LP ++ + + F N + +G
Sbjct: 124 LFMGVRGLFNALEMPLPGDFATYTQILTDTAFIILPGLVVWSTFRVFGGNPAVGIVLGMM 183
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV ++ ++ + G + + FFG P +VLP GA
Sbjct: 184 LVSGSLPNAWAVAQ-------GGEVTA---MNFFGF---IPVVGLQGSVLPAFIIGVVGA 230
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
K EK +K++PDV+ + + PF TLL+ L VIGPV + + I L
Sbjct: 231 KFEKAVRKVVPDVIDLLVTPFVTLLVMSILGLFVIGPVFHVVENYILIATKAILSMPFGL 290
Query: 305 YGIVLGAAWQVLVMFGLH--WGLVPLAILELQKGPGVILVASIAICFAQAGALLNIMMRT 362
G ++G Q++V+ G+H + L+ + +L + + A+ AQ A + + ++T
Sbjct: 291 GGFLIGGVHQLIVVSGVHHIFNLLEVQLLAADHANPFNAIITAAMT-AQGAATVAVGVKT 349
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
K K++ L+ PA +SA G+TEPAI+G+ L R PF ++ I+GA+ G + +
Sbjct: 350 KNPKLKTLAFPAALSAFLGITEPAIFGVNLRFRKPFFLSLIAGAIGGGLASILGLAGT-- 407
Query: 423 GGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLD 482
G G+ IP + + L +L+ + +F LGF LT + + + AE +
Sbjct: 408 -GNGITIIPGTMLYVGNGQLPQYLLMVAVSFALGFALTYMFGYEDEVDATAAAKQAEVAE 466
Query: 483 SEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVI 542
++E A + + + +P+ G+VVAL D D VF+SGAMG+G+A++PS G V APAD +
Sbjct: 467 EKEEVAPAALQNETLVTPIVGDVVALADVNDPVFSSGAMGQGIAVKPSQGVVYAPADAEV 526
Query: 543 RLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTI 602
+ FPT HA GL T +GAE+LIHVG+DTV+++G GF A V QG+KVK G +L +FD + I
Sbjct: 527 SIAFPTGHAFGLKTRNGAEVLIHVGIDTVSMNGDGFEAKVAQGNKVKAGDVLGTFDSNKI 586
Query: 603 KEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
AG TT +IVTNTA+Y + +A G + G+ ++E+K
Sbjct: 587 AAAGLDDTTMVIVTNTADYASVAPVATGSVAKGDAVIEVK 626
>gi|24380379|ref|NP_722334.1| putative PTS system, trehalose-specific IIABC component
[Streptococcus mutans UA159]
gi|21217545|gb|AAM43948.1|AF510742_2 trehalose PTS enzyme II [Streptococcus mutans]
gi|24378400|gb|AAN59640.1|AE015026_4 putative PTS system, trehalose-specific IIABC component
[Streptococcus mutans UA159]
Length = 655
Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 219/664 (32%), Positives = 328/664 (49%), Gaps = 46/664 (6%)
Query: 9 AKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIG 68
AK ++ +GGK+N++ + HC TR+RF L DESKAD + V GQ+Q++IG
Sbjct: 8 AKVLLDAIGGKENVSAVTHCATRMRFVLNDESKADVKTIEAIPAVKGTFTNAGQFQIIIG 67
Query: 69 NHVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLSAAGMIK 127
N VP Y V+GI G A A N R + L++ +F P++ + G+I
Sbjct: 68 NDVPLFYNDFTAVSGIEGVSKETAKSAAKSHQNPIQRVMTLLAEIFTPIIPAIIVGGLIL 127
Query: 128 GVVAIMAALGVAKTDGAYVVLNAA------------GDGLFQFLPLILAITAAKRFKMNQ 175
G ++ + DG + ++ G+ +FQFLP+ + + +++ +Q
Sbjct: 128 GFRNVIDQVQWGFLDGQTIAQHSQFWSGISSFLWLPGEAIFQFLPVGIVWSVSRKMGTSQ 187
Query: 176 FTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLP 235
+ +G LV P + ++ A + F T + Y V+P
Sbjct: 188 ILGIVLGICLVSPQLLNAYNVASTPAAEIAKKWVWDFGFFTVRRI-------GYQGQVIP 240
Query: 236 VIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVM----SWASDLVG 291
+ A + + +E ++K IP+VV + VPF +L+ + LA V+GP+ W S +V
Sbjct: 241 ALLAGLSLSYLEIFWRKKIPEVVSMIFVPFLSLIPALILAHTVLGPIGWTIGQWISTIVY 300
Query: 292 ALFTGIYDFSPV--LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC- 348
A TG PV L+G + GA + V+ GLH + + G L IA+
Sbjct: 301 AGLTG-----PVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLVADTGGTGLWPMIALSN 355
Query: 349 FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQ A+ +M EE+ Q+S+PA ISA GVTEPA++G+ + P + I ++
Sbjct: 356 IAQGSAVFAYYLMNRHEEREAQVSLPATISAYLGVTEPALFGVNIKYVYPLVAGMIGSSI 415
Query: 408 TGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPN 467
G F+V +G GL P + L F+I +VA + LT + N
Sbjct: 416 AGFLSVTFNVTANAIGIGGL---PGILSIKVKYMLPFFIIMLVA-IAVPMVLTVFFRRIN 471
Query: 468 LFGGPSEK------DAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAM 521
++ + AE SEK A T + SPL G+V L + D VFA G M
Sbjct: 472 FLTKSEDEAHQEKTETAEISASEKTNEPAVGTTFEIKSPLKGQVKPLSEAVDPVFAQGVM 531
Query: 522 GKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAH 581
G+GV I+PS G + +P +GV+ +LFPT HA+GL TD G ELLIH+GMDTV L+GKGF +
Sbjct: 532 GQGVLIDPSEGLLTSPVNGVVSVLFPTKHALGLVTDQGLELLIHIGMDTVNLEGKGFETY 591
Query: 582 VVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAK--GEIQLGNQLL 639
V QG +K G L+ FDID I +AGY TP+IVTN +Y Q +V+ EI+ G LL
Sbjct: 592 VKQGDTIKVGDKLIRFDIDAIHQAGYTTETPVIVTNQNDY-QPDVVGSLPREIERGEVLL 650
Query: 640 ELKK 643
K
Sbjct: 651 TASK 654
>gi|76788255|ref|YP_328925.1| PTS system, trehalose-specific IIBCA component [Streptococcus
agalactiae A909]
gi|76563312|gb|ABA45896.1| PTS system, trehalose-specific IIBCA component [Streptococcus
agalactiae A909]
Length = 676
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 222/682 (32%), Positives = 332/682 (48%), Gaps = 61/682 (8%)
Query: 9 AKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIG 68
AK ++ +GGK+NI+ + HC TR+RF L D SKA + + V GQ+QV+IG
Sbjct: 8 AKALLEAIGGKENISAVTHCATRMRFVLNDSSKAKVKVIEELPSVKGTFTNAGQFQVIIG 67
Query: 69 NHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAAGMIK 127
N VP Y + V+GI G A A + N R + +++ +F P++ + G+I
Sbjct: 68 NDVPIFYNAFVAVSGIEGVSKEAAKSAAQKNQNPLQRVLTMLAEIFTPIIPAIIVGGLIL 127
Query: 128 GVVAIMAAL-----------GVAKTD------------------GAYVVLNAAGDGLFQF 158
G I+ A+ GV + D G L G+ +F F
Sbjct: 128 GFRNILDAVPFEFLGQKVVDGVRQVDSSGHPIWNTLVDVSTFWSGVDSFLWLPGEAIFHF 187
Query: 159 LPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFF 218
LP+ + + ++ Q + +G LV P + +++ A +S F
Sbjct: 188 LPVGIVWSVTRKMGTTQILGIVLGICLVSPQLLNAYSVASTSAADIAKN------WSWNF 241
Query: 219 GLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLV 278
G Y + V+P + A + + +E ++K IP+VV + VPF +L+ + LA V
Sbjct: 242 GY-FTVQKIGYQAQVIPALLAGLSLSYLEIFWRKHIPEVVSMIFVPFLSLVPAIILAHTV 300
Query: 279 IGPVM----SWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GLVPLAILE 332
+GP+ W S +V TG + L+G + GA + V+ GLH + ++
Sbjct: 301 LGPIGWTLGKWISAIVLIGLTGPVKW---LFGAIFGALYAPFVITGLHHMTNAIDTQLIA 357
Query: 333 LQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGI 390
K L IA+ AQ A+L M +EK Q+S+PA ISA GVTEPAI+G+
Sbjct: 358 DTKTHTTGLWPMIALSNIAQGSAVLAYYFMHRHDEKEAQISLPAAISAYLGVTEPAIFGV 417
Query: 391 TLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIV 450
+ PF+ I ++ G F+V+ +G GL P F+ + F+ V
Sbjct: 418 NVKYIYPFVAGMIGSSVAGLLATTFNVQANSIGVGGL---PGFLSINVKYMGYFFICMAV 474
Query: 451 ANFVLGFGLTQLIKIPNLFGGPSEKD--------AAESLDSEKERVSAGITEQVVTSPLA 502
A F+ F LT K + E+ + S KE+ T+ V SPL+
Sbjct: 475 AIFIPLF-LTLFFKKSGILTKTEEEKLVPDAVIASTTETKSAKEKAVVSGTKLSVVSPLS 533
Query: 503 GEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAEL 562
G L+ D VF+ G MGKGV I+PS GE+V+P D + +LFPT HAIGL T +G E
Sbjct: 534 GLAKPLDQASDPVFSQGIMGKGVVIDPSDGELVSPVDATVSVLFPTKHAIGLLTSEGVEF 593
Query: 563 LIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYK 622
LIH+GMDTV L+GKGFT+HV QG VK G L++FDI IKE GY V TPI++TN ++
Sbjct: 594 LIHIGMDTVNLEGKGFTSHVAQGDTVKVGDKLITFDIPMIKEEGYIVETPILITNQQEFR 653
Query: 623 QIEVL-AKGEIQLGNQLLELKK 643
E++ +I+ G L+ KK
Sbjct: 654 PEELIDLPKQIKRGQALMVAKK 675
>gi|25010264|ref|NP_734659.1| hypothetical protein gbs0189 [Streptococcus agalactiae NEM316]
gi|77407900|ref|ZP_00784651.1| PTS system, IIABC components [Streptococcus agalactiae COH1]
gi|23094616|emb|CAD45834.1| Unknown [Streptococcus agalactiae NEM316]
gi|77173447|gb|EAO76565.1| PTS system, IIABC components [Streptococcus agalactiae COH1]
Length = 676
Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats.
Identities = 221/682 (32%), Positives = 332/682 (48%), Gaps = 61/682 (8%)
Query: 9 AKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIG 68
AK ++ +GGK+NI+ + HC TR+RF L D SKA + + V GQ+QV+IG
Sbjct: 8 AKALLEAIGGKENISAVTHCATRMRFVLNDSSKAKVKVIEELPSVKGTFTNAGQFQVIIG 67
Query: 69 NHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAAGMIK 127
N VP Y + V+GI G A A + N R + +++ +F P++ + G+I
Sbjct: 68 NDVPIFYNAFVAVSGIEGVSKEAAKSAAQKNQNPLQRVLTMLAEIFTPIIPAIIVGGLIL 127
Query: 128 GVVAIMAAL-----------GVAKTD------------------GAYVVLNAAGDGLFQF 158
G I+ A+ GV + D G L G+ +F F
Sbjct: 128 GFRNILDAVPFEFLGQKVVDGVRQVDSSGHPIWNTLVDVSTFWSGVDSFLWLPGEAIFHF 187
Query: 159 LPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFF 218
LP+ + + ++ Q + +G LV P + +++ A +S F
Sbjct: 188 LPVGIVWSVTRKMGTTQILGIVLGICLVSPQLLNAYSVASTSAADIAKN------WSWNF 241
Query: 219 GLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLV 278
G Y + V+P + A + + +E ++K IP+VV + VPF +L+ + LA V
Sbjct: 242 GY-FTVQKIGYQAQVIPALLAGLSLSYLEIFWRKHIPEVVSMIFVPFLSLVPAIILAHTV 300
Query: 279 IGPVM----SWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GLVPLAILE 332
+GP+ W S +V TG + L+G + GA + V+ GLH + ++
Sbjct: 301 LGPIGWTLGKWISAIVLIGLTGPVKW---LFGAIFGALYAPFVITGLHHMTNAIDTQLIA 357
Query: 333 LQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGI 390
K L IA+ AQ A+L M +EK Q+S+PA ISA GVTEPA++G+
Sbjct: 358 DTKTHTTGLWPMIALSNIAQGSAVLAYYFMHRHDEKEAQISLPAAISAYLGVTEPALFGV 417
Query: 391 TLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIV 450
+ PF+ I ++ G F+V+ +G GL P F+ + F+ V
Sbjct: 418 NVKYIYPFVAGMIGSSVAGLLATTFNVQANSIGVGGL---PGFLSINVKYMGYFFICMAV 474
Query: 451 ANFVLGFGLTQLIKIPNLFGGPSEKD--------AAESLDSEKERVSAGITEQVVTSPLA 502
A F+ F LT K + E+ + S KE+ T+ V SPL+
Sbjct: 475 AIFIPLF-LTLFFKKSGILTKTEEEKLVSDAVIASTTETKSAKEKAVVSGTKLSVVSPLS 533
Query: 503 GEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAEL 562
G L+ D VF+ G MGKGV I+PS GE+V+P D + +LFPT HAIGL T +G E
Sbjct: 534 GLAKPLDQASDPVFSQGIMGKGVVIDPSDGELVSPVDATVSVLFPTKHAIGLLTSEGVEF 593
Query: 563 LIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYK 622
LIH+GMDTV L+GKGFT+HV QG VK G L++FDI IKE GY V TPI++TN ++
Sbjct: 594 LIHIGMDTVNLEGKGFTSHVAQGDNVKVGDKLITFDIPMIKEEGYIVETPILITNQEEFR 653
Query: 623 QIEVL-AKGEIQLGNQLLELKK 643
E++ +I+ G L+ KK
Sbjct: 654 PEELIDLPKQIKRGQALMVAKK 675
>gi|22536376|ref|NP_687227.1| PTS system, IIABC components [Streptococcus agalactiae 2603V/R]
gi|76799022|ref|ZP_00781218.1| PTS system, IIABC components [Streptococcus agalactiae 18RS21]
gi|77405343|ref|ZP_00782438.1| PTS system, IIABC components [Streptococcus agalactiae H36B]
gi|77410949|ref|ZP_00787305.1| PTS system, IIABC components [Streptococcus agalactiae CJB111]
gi|22533202|gb|AAM99099.1|AE014200_18 PTS system, IIABC components [Streptococcus agalactiae 2603V/R]
gi|76585633|gb|EAO62195.1| PTS system, IIABC components [Streptococcus agalactiae 18RS21]
gi|77163004|gb|EAO73959.1| PTS system, IIABC components [Streptococcus agalactiae CJB111]
gi|77176021|gb|EAO78795.1| PTS system, IIABC components [Streptococcus agalactiae H36B]
Length = 676
Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats.
Identities = 221/682 (32%), Positives = 332/682 (48%), Gaps = 61/682 (8%)
Query: 9 AKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIG 68
AK ++ +GGK+NI+ + HC TR+RF L D SKA + + V GQ+QV+IG
Sbjct: 8 AKALLEAIGGKENISAVTHCATRMRFVLNDSSKAKVKVIEELPSVKGTFTNAGQFQVIIG 67
Query: 69 NHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAAGMIK 127
N VP Y + V+GI G A A + N R + +++ +F P++ + G+I
Sbjct: 68 NDVPIFYNAFVAVSGIEGVSKEAAKSAAQKNQNPLQRVLTMLAEIFTPIIPAIIVGGLIL 127
Query: 128 GVVAIMAA-----LGVAKTDGAYVVLNAA------------------------GDGLFQF 158
G I+ A LG DG V ++ G+ +F F
Sbjct: 128 GFRNILDAVPFEFLGQKVVDGVRQVDSSGHPIWNTLVDVSTFWSGVDSFLWLPGEAIFHF 187
Query: 159 LPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFF 218
LP+ + + ++ Q + +G LV P + +++ A +S F
Sbjct: 188 LPVGIVWSVTRKMGTTQILGIVLGICLVSPQLLNAYSVASTSAADIAKN------WSWNF 241
Query: 219 GLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLV 278
G Y + V+P + A + + +E ++K IP+VV + VPF +L+ + LA V
Sbjct: 242 GY-FTVQKIGYQAQVIPALLAGLSLSYLEIFWRKHIPEVVSMIFVPFLSLVPAIILAHTV 300
Query: 279 IGPVM----SWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GLVPLAILE 332
+GP+ W S +V TG + L+G + GA + V+ GLH + ++
Sbjct: 301 LGPIGWTLGKWISAIVLIGLTGPVKW---LFGAIFGALYAPFVITGLHHMTNAIDTQLIA 357
Query: 333 LQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGI 390
K L IA+ AQ A+L M +EK Q+S+PA ISA GVTEPA++G+
Sbjct: 358 DTKTHTTGLWPMIALSNIAQGSAVLAYYFMHRHDEKEAQISLPAAISAYLGVTEPALFGV 417
Query: 391 TLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIV 450
+ PF+ I ++ G F+V+ +G GL P F+ + F+ V
Sbjct: 418 NVKYIYPFVAGMIGSSVAGLLATTFNVQANSIGVGGL---PGFLSINVKYMGYFFICMAV 474
Query: 451 ANFVLGFGLTQLIKIPNLFGGPSEKD--------AAESLDSEKERVSAGITEQVVTSPLA 502
A F+ F LT K + E+ + S KE+ T+ V SPL+
Sbjct: 475 AIFIPLF-LTLFFKKSGILTKTEEEKLVPDAVIASTTETKSAKEKAVVSGTKLSVVSPLS 533
Query: 503 GEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAEL 562
G L+ D VF+ G MGKGV I+PS GE+V+P D + +LFPT HAIGL T +G E
Sbjct: 534 GLAKPLDQASDPVFSQGIMGKGVVIDPSDGELVSPVDATVSVLFPTKHAIGLLTSEGVEF 593
Query: 563 LIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYK 622
LIH+GMDTV L+GKGFT+HV QG VK G L++FDI IKE GY V TPI++TN ++
Sbjct: 594 LIHIGMDTVNLEGKGFTSHVAQGDTVKVGDKLITFDIPMIKEEGYIVETPILITNQQEFR 653
Query: 623 QIEVL-AKGEIQLGNQLLELKK 643
E++ +I+ G L+ KK
Sbjct: 654 PEELIDLPKQIKRGQALMVAKK 675
>gi|81096156|ref|ZP_00874505.1| Sugar-specific permease, EIIA 1 domain:PTS system,
trehalose-specific IIBC component:PTS system,
glucose-like IIB component [Streptococcus suis 89/1591]
gi|80977778|gb|EAP41312.1| Sugar-specific permease, EIIA 1 domain:PTS system,
trehalose-specific IIBC component:PTS system,
glucose-like IIB component [Streptococcus suis 89/1591]
Length = 664
Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats.
Identities = 215/653 (32%), Positives = 320/653 (49%), Gaps = 52/653 (7%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AK ++ +GGK+N+ + HC TR+RF L DE KA+ + V GQ+Q
Sbjct: 4 FEKEAKQLLEAIGGKENVNAVTHCATRMRFVLADEKKANVKVIEDIPAVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN +P Y V+GI G A A N R + +++ +F P++ L
Sbjct: 64 VIIGNDIPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNAIQRVMTMLAEIFTPIIPALIVG 123
Query: 124 GMIKGVVAI-----MAALGVAKTDGAYVV------------------------LNAAGDG 154
G+I G + M LG A DG V L G+
Sbjct: 124 GLILGFRNVLEGVQMEWLGQAMKDGQLVFDADGNPVWNTIVQVSPFWNGVNHFLWLPGEA 183
Query: 155 LFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIF 214
+F FLP+ + + +++ +Q + +G LV P + ++ A +
Sbjct: 184 IFHFLPVGITWSVSRKMGTSQILGIVLGICLVSPQLLNAYAVPGTDAATIASD------W 237
Query: 215 STFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPL 274
S FG I Y + V+P + A A + +E ++K++P+VV + VPF +LL + L
Sbjct: 238 SWNFGAFSI-ARIGYQAQVIPALLAGLALSYLEIFWRKVVPEVVSMIFVPFLSLLPAIIL 296
Query: 275 AFLVIGPVM----SWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAI 330
A V+GP+ W S +V A TG + L+G + GA + V+ GLH +
Sbjct: 297 AHTVLGPIGWTIGQWLSTVVLAGLTGPLKW---LFGAIFGALYAPFVITGLHHMTNAIDT 353
Query: 331 LELQKGPGVILVASIAIC-FAQAGALLN-IMMRTKEEKVRQLSIPAFISALFGVTEPAIY 388
+ G L IA+ AQ A+ +M EK Q+S+PA ISA GVTEPA++
Sbjct: 354 QLIADAGGTGLWPMIALSNIAQGSAVFAYFLMNRHNEKEAQVSLPATISAYLGVTEPALF 413
Query: 389 GITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIA 448
G+ + PF+ I ++ G F+++ +G GL I S + ++A
Sbjct: 414 GVNVKYVYPFVAAMIGSSIAGLLSVTFNIQAASIGIGGLPGILSIKAEYWGAFFMTMIVA 473
Query: 449 IVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVAL 508
IV +L T + K F E+ E + + V G +++ SPL G+ L
Sbjct: 474 IVVPMIL----TAVFKRTGAFS-KKEETVEEVVAPTEAVVETGAAIELI-SPLTGQTKEL 527
Query: 509 EDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGM 568
D VFASG MG+GV I+P+ G +VAP DG I +LFPTNHA+G+ +G E L+H+GM
Sbjct: 528 SQATDPVFASGVMGQGVLIDPTEGLLVAPVDGEISVLFPTNHAVGITATNGVEFLMHIGM 587
Query: 569 DTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
DTV L+GKGFTAHV QG KVK G L+SFDID IK AG TP+IVTN ++
Sbjct: 588 DTVGLEGKGFTAHVKQGDKVKAGDKLISFDIDVIKAAGLVAETPVIVTNQTDF 640
>gi|42519806|ref|NP_965736.1| phosphoenolpyruvate-dependent sugar phosphotransferase system
EIIABC, sucrose specific [Lactobacillus johnsonii NCC
533]
gi|41584096|gb|AAS09702.1| phosphoenolpyruvate-dependent sugar phosphotransferase system
EIIABC, sucrose specific [Lactobacillus johnsonii NCC
533]
Length = 647
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 202/670 (30%), Positives = 337/670 (50%), Gaps = 55/670 (8%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D+ ++A+ ++ VG +DN+ HC TRLR LKD+SK + L + K GQ+
Sbjct: 2 DHKKVAEAVIEAVG-RDNLVAAAHCATRLRLVLKDDSKVNMKMLDSDPDIKGTFKTNGQF 60
Query: 64 QVVIG-NHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFD---RFIALVSGLFQPMLGT 119
Q++IG V +VY+ ++K+ G+S + D A + F+ FI L+S +F P++
Sbjct: 61 QIIIGPGDVNNVYDELIKMTGLSELSTDDLKKVAQKDQKFNPVMAFIKLLSDIFVPIIPA 120
Query: 120 LSAAGMIKGVVAIMAALGV----------AKTDGAYVVLNAAGDGLFQFLPLILAITAAK 169
L A G++ + + + G+ G ++ F F+P+++ ++AAK
Sbjct: 121 LVAGGLLMALNNFLTSPGLFGAKSVVQMAPNVKGLSEIIQVMSAAPFIFMPILVGMSAAK 180
Query: 170 RFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSY 229
RF NQF IG + P + AG + FGL + ++Y
Sbjct: 181 RFGANQFLGATIGMIMTTPALGG------------AGK------YWDIFGLHV--SQTNY 220
Query: 230 LSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDL 289
V+PV+ AVW A +EK F K +P V P +++IT L F +IGPV SD
Sbjct: 221 QYQVIPVLVAVWLLAFLEKRFHKWLPSAVDFTFTPLLSIMITGFLTFTIIGPVFKGVSDA 280
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLA---ILELQKGPG---VILVA 343
+ A +Y+ + + G ++ +V GLH + + E +G G I V
Sbjct: 281 ITAAIVWLYNTTGAFGMGIFGLSYSAIVTTGLHQSFPAVETQLLAEYARGRGSGDFIFVT 340
Query: 344 SIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCI 403
+ AQ A I TK EKV+ L+ + +SAL G+TEPA++G+ L + PF I
Sbjct: 341 ACMANVAQGAATFAIYFLTKNEKVKGLASSSGVSALLGITEPALFGVNLKYKFPFFCALI 400
Query: 404 SGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLI 463
+ A+ V +G G S + S M + +++V +F++ FGLT +
Sbjct: 401 GAGVGAAFAGLMHVTAAALGSAGFLGFLSMVPKSIPM----WALSVVISFIVAFGLTFVY 456
Query: 464 KIPNLFGGPSEK----DAAESLDSEKERVSAGITE------QVVTSPLAGEVVALEDTPD 513
+ E+ ++A +++E+ I E +V+ +P++G+ +L+D D
Sbjct: 457 GKRHFKEDVVEESGTVESAGDQVAQQEKAEQIIKEDKELHDEVIAAPVSGKAESLKDVND 516
Query: 514 AVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVAL 573
VF++ AMGKG A+ PS G + +P G I + + T HA G+ +D+GAE+LIH+G+DTV +
Sbjct: 517 PVFSTEAMGKGAAMVPSEGTIYSPVTGEITVAYETKHAYGIKSDEGAEVLIHIGIDTVNM 576
Query: 574 DGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQ 633
G+GFT V QG V+KG+ L + D+D +K+AGY T ++TNT +Y ++ + E +
Sbjct: 577 KGEGFTTDVKQGQHVEKGEKLGTVDLDAVKKAGYDTTVMTVITNTTSYANVQRIDGVEKK 636
Query: 634 LGNQLLELKK 643
G+ L+ + K
Sbjct: 637 HGDDLIAVTK 646
>gi|154509669|ref|ZP_02045311.1| hypothetical protein ACTODO_02202 [Actinomyces odontolyticus ATCC
17982]
gi|153799303|gb|EDN81723.1| hypothetical protein ACTODO_02202 [Actinomyces odontolyticus ATCC
17982]
Length = 669
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 222/678 (32%), Positives = 338/678 (49%), Gaps = 55/678 (8%)
Query: 2 AKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGG 61
A D+ ++A ++V VGG NI+ HC TRLR + DESK + L + + AGG
Sbjct: 4 AMDHAKVAGEVVEAVGGASNISAAAHCATRLRLVIADESKINQQALDDNEDLKGTFAAGG 63
Query: 62 QYQVVIG-NHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGT 119
+Q+++G V VY ++ G+ +A ++A +G NLF RFI +++ +F P+L
Sbjct: 64 MFQIIVGPGDVDQVYAKMVANHGVREVSKDEAKEEAEKGGNLFSRFIKMIADIFVPILPA 123
Query: 120 LSAAGMIKGVVAIMAALGV-----------AKTDGAYVVLNAAGDGLFQFLPLILAITAA 168
L A G++ + +M A G+ A D A ++N F LP+++ +AA
Sbjct: 124 LVAGGLMMAINNVMTAEGLFGDQSLTTMYPAIADYA-ALINMVSSAAFASLPVLVGFSAA 182
Query: 169 KRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASS 228
KRF N + AIG A+V ++ ++ L AG S + FG+ +
Sbjct: 183 KRFGGNVYLGAAIGAAMVSSDLLNAWNTGAAL----AGEA--SVEYWHIFGMDV--AKIG 234
Query: 229 YLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASD 288
Y + V+P +A + IEK K++ + P T+L+T LAF +IGPV A++
Sbjct: 235 YQAQVIPTLAVTYVMCLIEKSLHKVLKGTADFLLTPLITMLVTGFLAFTIIGPVTRVAAE 294
Query: 289 LVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGL----VPLAILELQKGPGVILVAS 344
+ Y V G++ G + +V+ GLH +PL + G + VAS
Sbjct: 295 YLTWGINWTYSTLGVFGGLLFGLVYSPIVVTGLHQSFPAIEIPLLPVNGGVGDFIFPVAS 354
Query: 345 IAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCIS 404
+A AQ A L I +T++ K++ L+ SA+FG+TEPAI+G+ L +R PF +
Sbjct: 355 MA-NVAQGAAALAIFFKTRDAKLKGLAGAGGASAVFGITEPAIFGVNLRLRWPFFCAMAA 413
Query: 405 GALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIK 464
A+ A +A +V+ Q +G G S I S + +L V FVL FG T
Sbjct: 414 AAIGSAGVALLNVRGQALGAAGFVGFVSIIPTS----IPAYLALEVLVFVLSFGFTFAYA 469
Query: 465 IPNLFGGPSEKDAAESLDSEKERVSA---------------------GITEQVVTSPLAG 503
+ G ++ + V+ + + V SPLAG
Sbjct: 470 MTR---GKADMEGRAPAAKAAAPVATPAALAPAAAPAATPAPSFSDEALADLSVASPLAG 526
Query: 504 EVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELL 563
VV L+ D FA G +G G+ IEP+ G VVAP DG + + FPT HA GL + G ++L
Sbjct: 527 TVVPLKQVKDESFAKGMLGPGIGIEPADGLVVAPFDGTVTVAFPTGHAYGLKSASGVQVL 586
Query: 564 IHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQ 623
IHVGMDTV LDGKGFT V +G V++G +L D+D I+EAGY TP++VTN
Sbjct: 587 IHVGMDTVKLDGKGFTPRVAKGDVVRRGDVLAEVDLDVIREAGYETITPVVVTNKKKLGA 646
Query: 624 IEVLAKGEIQLGNQLLEL 641
+ +A GEIQ G+ LL++
Sbjct: 647 VTPVASGEIQRGDALLDV 664
>gi|116630331|ref|YP_815592.1| Sucrose PTS, EIIBCA [Lactobacillus gasseri ATCC 33323]
gi|116095913|gb|ABJ61065.1| Sucrose PTS, EIIBCA [Lactobacillus gasseri ATCC 33323]
Length = 647
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 198/666 (29%), Positives = 332/666 (49%), Gaps = 47/666 (7%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D+ ++A+ ++ VG +DN+ HC TRLR LKD+SK + L + K GQ+
Sbjct: 2 DHKKVAETVIEAVG-RDNLVAAAHCATRLRLVLKDDSKVNMKMLDSDPDIKGTFKTNGQF 60
Query: 64 QVVIG-NHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFD---RFIALVSGLFQPMLGT 119
Q++IG V +VY+ ++K+ G+S + D A + F+ FI L+S +F P++
Sbjct: 61 QIIIGPGDVNNVYDELIKMTGLSELSTDDLKKVAQKDQKFNPVMAFIKLLSDIFVPIIPA 120
Query: 120 LSAAGMIKGVVAIMAALGV----------AKTDGAYVVLNAAGDGLFQFLPLILAITAAK 169
L A G++ + + + G+ G ++ F F+P+++ ++AAK
Sbjct: 121 LVAGGLLMALNNFLTSPGLFGAKSVVQMAPNVKGLSEIIQVMSAAPFIFMPILVGMSAAK 180
Query: 170 RFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSY 229
RF NQF IG + P + AG + FGL + ++Y
Sbjct: 181 RFGANQFLGATIGMIMTTPALGG------------AGK------YWDIFGLHV--SQTNY 220
Query: 230 LSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDL 289
V+PV+ AVW A +EK F K +P V P +++IT L F +IGPV SD
Sbjct: 221 QYQVIPVLVAVWLLAFLEKRFHKWLPSAVDFTFTPLLSIMITGFLTFTIIGPVFKGVSDA 280
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLA---ILELQKGPG---VILVA 343
+ A +Y+ + + G ++ +V GLH + + E +G G I V
Sbjct: 281 ITAAIVWLYNTTGAFGMGIFGLSYSAIVTTGLHQSFPAVETQLLAEYARGRGSGDFIFVT 340
Query: 344 SIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCI 403
+ AQ A + TK EKV+ L+ + +SAL G+TEPA++G+ L + PF I
Sbjct: 341 ACMANVAQGAATFAVYFLTKNEKVKGLASSSGVSALLGITEPALFGVNLKYKFPFFCALI 400
Query: 404 SGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLI 463
+ A+ V +G G S + S M + I+ + F L F +
Sbjct: 401 GAGVGAAFAGLMHVTAAALGSAGFLGFLSMVPKSIPMWALSVAISFIVAFALTFVYGKRH 460
Query: 464 KIPNLFGGPSEKDAAESLDSEKERVSAGITE------QVVTSPLAGEVVALEDTPDAVFA 517
++ ++A +++E+ I E +V+ +P++G+ +L+D D VF+
Sbjct: 461 FKEDVVEESGTVESAGDQVAQQEKADQIIKEDKELHDEVIAAPVSGKAESLKDVKDPVFS 520
Query: 518 SGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKG 577
+ AMGKG A+ PS G + +P G I + + T HA G+ +D+GAE+LIH+G+DTV + G+G
Sbjct: 521 TEAMGKGAAMVPSEGTIYSPVTGEITVAYETKHAYGIKSDEGAEVLIHIGIDTVNMKGEG 580
Query: 578 FTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQ 637
FT+ V QG V+KG+ L + D+D +K+AGY T ++TNTA+Y ++ + + + G+
Sbjct: 581 FTSDVKQGQHVEKGEKLGTVDLDAVKKAGYDTTVMTVITNTASYANVQRIDGVDKKHGDD 640
Query: 638 LLELKK 643
L+ + K
Sbjct: 641 LIAVTK 646
>gi|58336738|ref|YP_193323.1| sucrose PTS II ABC [Lactobacillus acidophilus NCFM]
gi|33149353|gb|AAO38866.1| sucrose PTS transporter [Lactobacillus acidophilus]
gi|58254055|gb|AAV42292.1| sucrose PTS II ABC [Lactobacillus acidophilus NCFM]
Length = 649
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 205/670 (30%), Positives = 325/670 (48%), Gaps = 62/670 (9%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D+ ++A+ ++ VG +DNI HC TRLR LKD+SK D L V K GQY
Sbjct: 2 DHKKVAERVIKDVG-RDNIIAGAHCATRLRLVLKDDSKVDQKALDNDPDVKGTFKTNGQY 60
Query: 64 QVVIG-NHVPDVYETVLKVAGISGEGSVDADDDAVEG---NLFDRFIALVSGLFQPMLGT 119
QV+IG V DVY+ +K+ G+ + D A EG N FI L+S +F P++
Sbjct: 61 QVIIGPGDVNDVYDEFIKITGLKELSTDDLKKVAAEGQKKNPIMDFIKLLSDIFVPIIPA 120
Query: 120 LSAAGMIKGVVAIMAALG-------------VAKTDGAYVVLNAAGDGLFQFLPLILAIT 166
L A G++ + + + G VA V++AA F F+P+++ ++
Sbjct: 121 LVAGGLLMALNNFLTSPGLFGPKSVVQMAPNVAGISSMIQVMSAAP---FIFMPILVGMS 177
Query: 167 AAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPA 226
AAKRF NQF IG + P + + F FGL +
Sbjct: 178 AAKRFGANQFLGATIGMIMTTPGLGGATK------------------FWDIFGLHV--AQ 217
Query: 227 SSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWA 286
++Y V+PV+ AVW + EK F K +P V P +++IT L F +IGPV
Sbjct: 218 TNYQYQVIPVLVAVWVLSIFEKYFHKHLPSAVDFTFTPLLSIMITGFLTFTIIGPVFKGV 277
Query: 287 SDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLA---ILELQKGPG----V 339
SD + +YD + V G ++ +V GLH + + K P
Sbjct: 278 SDAITNAIVWLYDTTGAFGMGVFGLSYSAIVTTGLHQSFPAVETQLLAAFAKNPASSGDF 337
Query: 340 ILVASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFI 399
I V + AQ A + TK +K++ L+ + +SAL G+TEPA++G+ L + PF
Sbjct: 338 IFVTACMANVAQGAATFAVYFLTKNKKMKGLASSSGVSALLGITEPALFGVNLKYKFPFF 397
Query: 400 MTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGL 459
I + A+ V +G G S + M +++++ +F + F L
Sbjct: 398 CALIGSGVAAAFAGLMHVTAAALGSAGFLGFLSIYPRTIPM----WVVSVAISFAVSFIL 453
Query: 460 TQLIKIPNLFGGPSEKD---------AAESLDSEK-ERVSAGITEQVVTSPLAGEVVALE 509
T + +L +E+D A E+ +EK + + ++++ SP+ G +L
Sbjct: 454 TYVYGKSHLKEEVAEQDVPVNDATDYAEETQKAEKIGKEQLALKDEIIYSPVDGTPESLT 513
Query: 510 DTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMD 569
D VF++ MG G A+ PS G + AP G + + + T HA G+ +DDGAE+LIH+G+D
Sbjct: 514 KVNDQVFSAKLMGDGAAVIPSDGTIYAPVTGTVTIAYETKHAYGIKSDDGAEVLIHIGLD 573
Query: 570 TVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAK 629
TV L G+ F + V QG +V+KG L S D+D +K+AGY T +++TNTANY ++ +
Sbjct: 574 TVNLKGEHFESFVKQGQRVEKGDKLGSVDLDAVKKAGYDTTVMVVITNTANYANVQRITD 633
Query: 630 GEIQLGNQLL 639
+ G++L+
Sbjct: 634 AGDKHGDKLI 643
>gi|15903609|ref|NP_359159.1| Phosphotransferase system enzyme II [Streptococcus pneumoniae R6]
gi|116517116|ref|YP_816986.1| PTS system IIABC components [Streptococcus pneumoniae D39]
gi|148994041|ref|ZP_01823397.1| PTS system IIABC component [Streptococcus pneumoniae SP9-BS68]
gi|15459232|gb|AAL00370.1| Phosphotransferase system enzyme II [Streptococcus pneumoniae R6]
gi|116077692|gb|ABJ55412.1| PTS system IIABC components [Streptococcus pneumoniae D39]
gi|147927508|gb|EDK78536.1| PTS system IIABC component [Streptococcus pneumoniae SP9-BS68]
Length = 627
Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats.
Identities = 206/640 (32%), Positives = 332/640 (51%), Gaps = 22/640 (3%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVV 66
E+AK ++ +GG++N+ + HC TRLR +KDE K + + + + V GQYQ++
Sbjct: 5 EIAKKVIDALGGRENVNSVAHCATRLRVMVKDEEKINKEVIENLEKVQGAFFNSGQYQII 64
Query: 67 IGN-HVPDVYETVLKVAGISGEGSVDADDD-AVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
G V +Y+ V+ V G+ D + A +GN F R I +F P++ + A G
Sbjct: 65 FGTGTVNKMYDEVV-VLGLPTSSKDDMKAEVAKQGNWFQRAIRTFGDVFVPIIPVIVATG 123
Query: 125 MIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+ GV + AL + D F LP ++ + + F N + +G
Sbjct: 124 LFMGVRGLFNALEMPLPGDFATYTQILTDTAFIILPGLVVWSTFRVFGGNPAVGIVLGMM 183
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV ++ ++ + G + + FFG P +VLP GA
Sbjct: 184 LVSGSLPNAWAVAQ-------GGEVTA---MNFFGF---IPVVGLQGSVLPAFIIGVVGA 230
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
K EK +K++PDV+ + + PF TLL+ L VIGPV + + I L
Sbjct: 231 KFEKAVRKVVPDVIDLLVTPFVTLLVMSILGLFVIGPVFHVVENYILIATKAILSMPFGL 290
Query: 305 YGIVLGAAWQVLVMFGLH--WGLVPLAILELQKGPGVILVASIAICFAQAGALLNIMMRT 362
G ++G Q++V+ G+H + L+ + +L + + A+ AQ A + + ++T
Sbjct: 291 GGFLIGGVHQLIVVSGVHHIFNLLEVQLLAADHANPFNAIITAAMT-AQGAATVAVGVKT 349
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
K K++ L+ PA +SA G+TEPAI+G+ L R PF ++ I+GA+ G + +
Sbjct: 350 KNPKLKTLAFPAALSAFLGITEPAIFGVNLRFRKPFFLSLIAGAIGGGLASILGLAGT-- 407
Query: 423 GGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLD 482
G G+ IP + + L +L+ + +F LGF LT + + + AE +
Sbjct: 408 -GNGITIIPGTMLYVGNGQLPQYLLMVAVSFALGFALTYMFGYEDEVDATAAAKQAEVAE 466
Query: 483 SEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVI 542
++E A + + + +P+ G+VVAL D D VF+SGAMG+G+A++PS G V A AD +
Sbjct: 467 EKEEVAPAALQNETLVTPIVGDVVALADVNDPVFSSGAMGQGIAVKPSQGVVYALADAEV 526
Query: 543 RLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTI 602
+ FPT HA GL T +GAE+LIHVG+DTV+++G GF A V QG+KVK G +L +FD + I
Sbjct: 527 SIAFPTGHAFGLKTRNGAEVLIHVGIDTVSMNGDGFEAKVAQGNKVKAGDVLGTFDSNKI 586
Query: 603 KEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
AG TT +IVTNTA+Y + +A G + G+ ++E+K
Sbjct: 587 AAAGLDDTTMVIVTNTADYASVAPVATGSVSKGDAVIEVK 626
>gi|15903741|ref|NP_359291.1| Phosphotransferase system, trehalose-specific IIBC component
[Streptococcus pneumoniae R6]
gi|15459375|gb|AAL00502.1| Phosphotransferase system, trehalose-specific IIBC component
[Streptococcus pneumoniae R6]
Length = 705
Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats.
Identities = 205/640 (32%), Positives = 315/640 (49%), Gaps = 35/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AKD++ +GGK+N+T + HC TR+RF L D+ KA+ + V GQ+Q
Sbjct: 54 FEQEAKDLLQAIGGKENVTAVTHCATRMRFVLGDDKKANVKAIESIPAVKGTFTNAGQFQ 113
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N+ + ++ +F P++ L
Sbjct: 114 VIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNVVQGVMTTLAEIFTPIIPALIVG 173
Query: 124 GMIKGVVAIMAALGVAKTDGAYVVLNAA------------GDGLFQFLPLILAITAAKRF 171
G+I G ++ + + DG + ++ G+ +FQFLP+ + + +++
Sbjct: 174 GLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVSRKM 233
Query: 172 KMNQFTALAIGFALVYPNIAASFT-AEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+Q + +G LV P + ++ A P + A F+ Y
Sbjct: 234 GTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTV--------NRIGYQ 285
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPV-MSWASDL 289
+ V+P + A + + +E ++K IP+V+ + VPF +L+ + LA V+GP+ + L
Sbjct: 286 AQVIPALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGL 345
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC- 348
+ G+ L+G + GA + V+ GLH + + G L IA+
Sbjct: 346 SSVVLAGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSN 405
Query: 349 FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQ A+ M +E+ Q+S+PA ISA GVTEPA++G+ + PF+ AL
Sbjct: 406 IAQGSAVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSAL 465
Query: 408 TGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPN 467
G F+V +G GL I S ++ F ++ V+ LT +
Sbjct: 466 AGMLSVIFNVTAASIGIGGLPGILSI----QPQYMLPFAGTMLVAIVVPMLLTFFFRKAG 521
Query: 468 LFG---GPSEKDAAESLDSEKERVSAGITEQV---VTSPLAGEVVALEDTPDAVFASGAM 521
LF G + A E E VS + E + SPL G+V L D VFASG M
Sbjct: 522 LFTKTEGDTNLQAEFVAQEEAEFVSHELVELTSVEIISPLTGQVKELSQATDPVFASGVM 581
Query: 522 GKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAH 581
G+G+ IEPS GE+ +P +G + +LFPT HAIG+ +D+G ELLIH+GMDTV LDGKGF +
Sbjct: 582 GQGLVIEPSQGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESL 641
Query: 582 VVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
VVQG V GQ L+ FD+D IK AG TP+I+TN Y
Sbjct: 642 VVQGDHVTVGQQLIRFDMDVIKAAGLVTETPVIITNQDAY 681
>gi|126700733|ref|YP_001089630.1| PTS system, beta-glucoside-specific IIabc component [Clostridium
difficile 630]
gi|115252170|emb|CAJ70008.1| PTS system, beta-glucoside-specific IIabc component [Clostridium
difficile 630]
Length = 623
Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 206/635 (32%), Positives = 338/635 (53%), Gaps = 50/635 (7%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +L ++I+ +GGK+NI + HCVTRLRF+L D S A T+ + K GV+ VV YQ
Sbjct: 3 YKDLNENIIKLIGGKENIKSVAHCVTRLRFTLNDRSIAQTEEIKKLKGVIDVVSNDVAYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDAD--DDAVEG--NLFDRFIALVSGLFQPMLGTL 120
++IG HV DVY + + G+S S + G +F+ +VS ++ L
Sbjct: 63 IIIGTHVVDVYNEFMSMIGLSSSESSIKSERKKGIRGIKGIFNSIFVVVSETMTSVIEVL 122
Query: 121 SAAGMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
AAG++ ++A++ G+ ++D Y +L+ F FLP+++AI +AKR +N + A+
Sbjct: 123 LAAGILASILALLNMSGILQSDSPTYQILDTLRSATFHFLPVLIAIASAKRLNVNPYIAV 182
Query: 180 AIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAA 239
+ L +++S + L + FG I A++Y ++ +P++
Sbjct: 183 VLAVTL----LSSSIDGVEGL---------------SLFG--INLQATTYANSFIPILLG 221
Query: 240 VWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD 299
VWA I +G KKI+P + F+VP +L+IT+ + + GP+ W D + + D
Sbjct: 222 VWAMGIIIEGLKKILPKALHYFLVPVLSLIITLSVTLTIFGPIGMWIGDGLNYACMFLID 281
Query: 300 FSPVLYGIVLGAAWQ-VLVMFGLHWGLVPLA---ILELQKGP---GVILVASIAICFAQA 352
+ L AA Q +L++FG +P++ + L P G ++ IA+C
Sbjct: 282 TLGNWSVVALYAALQPLLIVFGAANFTMPISLNSVTTLGYDPIFMGAATISDIAVC---- 337
Query: 353 GALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYL 412
GA+ ++T+ ++ +QL SAL GVTEP+++G+ + R PF+ I G + G
Sbjct: 338 GAMFGYFLKTRNKEQKQLFGTVSFSALMGVTEPSVFGVFMKYRRPFVAVMIGGGIGGLIA 397
Query: 413 AFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGP 472
VK M GL A+P+++ +I++V +FV + L+ IP+
Sbjct: 398 GLAQVKTYGMV-WGLAALPTYLVGGEVSNFTFMIISVVVSFVAATAASYLLGIPS----- 451
Query: 473 SEKDAAESLDSEKER---VSAGITEQVVTSPLA-GEVVALEDTPDAVFASGAMGKGVAIE 528
EK+ + D+EKE ++ + + +A G+V+AL + D F+SGA+GKGV +
Sbjct: 452 DEKEEVKG-DNEKELELIINENNSRTISIGNVAKGQVIALGEVNDKAFSSGALGKGVGVI 510
Query: 529 PSVGE--VVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGS 586
PS + V++P DG I ++FPT HA G+ TD+G E+LIH+G+DTV LDGK F + V Q
Sbjct: 511 PSESKSTVISPVDGTITIVFPTKHAYGIVTDEGLEILIHIGIDTVNLDGKFFESLVTQNQ 570
Query: 587 KVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
+VKKG L F+ D I E G+ T +VTNT++Y
Sbjct: 571 RVKKGDALAVFESDKIIEEGFDSTIITVVTNTSDY 605
>gi|15901555|ref|NP_346159.1| PTS system IIABC components [Streptococcus pneumoniae TIGR4]
gi|111657459|ref|ZP_01408207.1| hypothetical protein SpneT_02001333 [Streptococcus pneumoniae
TIGR4]
gi|14973217|gb|AAK75799.1| PTS system IIABC components [Streptococcus pneumoniae TIGR4]
Length = 627
Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats.
Identities = 204/640 (31%), Positives = 330/640 (51%), Gaps = 22/640 (3%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVV 66
E+AK ++ +GG++N+ + HC TRLR +KDE K + + + + V GQYQ++
Sbjct: 5 EIAKKVIDALGGRENVNSVAHCATRLRVMVKDEEKINKEVIENLEKVQGAFFNSGQYQII 64
Query: 67 IGN-HVPDVYETVLKVAGISGEGSVDADDD-AVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
G V +Y+ V+ V G+ D + A +GN F R I +F P++ + A G
Sbjct: 65 FGTGTVNKMYDEVV-VLGLPTSSKDDMKAEVAKQGNWFQRAIRTFGDVFVPIIPVIVATG 123
Query: 125 MIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+ GV + AL + D F LP ++ + + F N + +G
Sbjct: 124 LFMGVRGLFNALEMPLPGDFATYTQILTDTAFIILPGLVVWSTFRVFGGNPAVGIVLGMM 183
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV ++ ++ + G + + FFG P +VLP GA
Sbjct: 184 LVSGSLPNAWAVAQ-------GGEVTA---MNFFGF---IPVVGLQGSVLPAFIIGVVGA 230
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
K EK +K++PDV+ + + PF TLL+ L VIGPV + + I L
Sbjct: 231 KFEKAVRKVVPDVIDLLVTPFVTLLVMSILGLFVIGPVFHVVENYILIATKAILSMPFGL 290
Query: 305 YGIVLGAAWQVLVMFGLH--WGLVPLAILELQKGPGVILVASIAICFAQAGALLNIMMRT 362
G ++G Q++V+ G+H + L+ + +L + + A+ AQ A + + ++T
Sbjct: 291 GGFLIGGVHQLIVVSGVHHIFNLLEVQLLAADHANPFNAIITAAMT-AQGAATVAVGVKT 349
Query: 363 KEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVM 422
K K++ L+ PA +SA G+TEPAI+G+ L R PF ++ I+GA+ G + +
Sbjct: 350 KNPKLKTLAFPAALSAFLGITEPAIFGVNLRFRKPFFLSLIAGAIGGGLASILGLAGT-- 407
Query: 423 GGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLD 482
G G+ IP + + L +L+ + +F LGF LT + + + AE +
Sbjct: 408 -GNGITIIPGTMLYVGNGQLPQYLLMVAVSFALGFALTYMFGYEDEVDATAAAKRAEVAE 466
Query: 483 SEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVI 542
++E A + + + +P+ G+VVAL D D VF+SGAMG+G+ ++PS G V APAD +
Sbjct: 467 EKEEVAPAALQNETLVTPIVGDVVALADVNDPVFSSGAMGQGIVVKPSQGVVYAPADAEV 526
Query: 543 RLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTI 602
+ FPT HA GL T +GAE+LIHVG+DTV+++G GF V QG+KVK G +L +FD + I
Sbjct: 527 SIAFPTGHAFGLKTRNGAEVLIHVGIDTVSMNGDGFETKVAQGNKVKAGDVLGTFDSNKI 586
Query: 603 KEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
AG TT +IVTNT +Y + +A G + G+ ++E+K
Sbjct: 587 AAAGLDDTTMVIVTNTGDYASVAPVATGSVAKGDAVIEVK 626
>gi|145953576|ref|ZP_01802584.1| hypothetical protein CdifQ_04003567 [Clostridium difficile
QCD-32g58]
Length = 623
Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats.
Identities = 206/635 (32%), Positives = 338/635 (53%), Gaps = 50/635 (7%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
Y +L ++I+ +GGK+NI + HCVTRLR +L D S A T+ + K GV+ VV YQ
Sbjct: 3 YKDLNENIIKLIGGKENIKSVAHCVTRLRLTLNDRSIAQTEEIKKLKGVIDVVSNDVAYQ 62
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDAD--DDAVEG--NLFDRFIALVSGLFQPMLGTL 120
++IG HV DVY + + G+S S + G +F+ +VS ++ L
Sbjct: 63 IIIGTHVVDVYNEFMSMIGLSSSESSIKSERKKGIRGIKGIFNSIFVVVSETMTSVIEVL 122
Query: 121 SAAGMIKGVVAIMAALGVAKTDG-AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
AAG++ ++A++ G+ ++D Y +L+ F FLP+++AI +AKR +N + A+
Sbjct: 123 LAAGILASILALLNMSGILQSDSPTYQILDTLRSATFHFLPVLIAIASAKRLNVNPYIAV 182
Query: 180 AIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAA 239
+ L +++S + L + FG I A++Y ++ +P++
Sbjct: 183 VLAVTL----LSSSIDGVEGL---------------SLFG--INLQATTYANSFIPILLG 221
Query: 240 VWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYD 299
VWA I +G KKI+P + F+VP +L+IT+ + V GP+ W D + + D
Sbjct: 222 VWAMGIIIEGLKKILPKALHYFLVPVLSLIITLSVTLTVFGPIGMWIGDGLNYACMFLID 281
Query: 300 FSPVLYGIVLGAAWQ-VLVMFGLHWGLVPLA---ILELQKGP---GVILVASIAICFAQA 352
+ L AA Q +L++FG +P++ + L P G ++ IA+C
Sbjct: 282 TLGNWSVVALYAALQPLLIVFGAANFTMPISLNSVTTLGYDPIFMGAATISDIAVC---- 337
Query: 353 GALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYL 412
GA+ ++T+ ++ +QL SAL GVTEP+++G+ + R PF+ I G + G
Sbjct: 338 GAMFGYFLKTRNKEQKQLFGTVSFSALMGVTEPSVFGVFMKYRRPFVAVMIGGGIGGLIA 397
Query: 413 AFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGP 472
VK M GL A+P+++ + +I++V +FV + L+ IP+
Sbjct: 398 GLAQVKTYGMV-WGLAALPTYLVGGEASNFTFMIISVVVSFVAATAASYLLGIPS----- 451
Query: 473 SEKDAAESLDSEKER---VSAGITEQVVTSPLA-GEVVALEDTPDAVFASGAMGKGVAIE 528
EK+ + D+EKE ++ + + +A G+V+AL + D F+SGA+GKGV +
Sbjct: 452 DEKEEVKG-DNEKELELIINENNSRTISIGNVAKGQVIALGEVNDKAFSSGALGKGVGVI 510
Query: 529 PSVGE--VVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGS 586
PS + V++P DG I ++FPT HA G+ TD+G E+LIH+G+DTV LDGK F + V Q
Sbjct: 511 PSESKSTVISPVDGTITIVFPTKHAYGIVTDEGLEILIHIGIDTVNLDGKFFESLVTQNQ 570
Query: 587 KVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
+VKKG L F+ D I E G+ T +VTNT++Y
Sbjct: 571 RVKKGDALAVFESDKIIEEGFDSTIITVVTNTSDY 605
>gi|157076120|gb|ABV10803.1| PTS system, IIABC components [Streptococcus gordonii str. Challis
substr. CH1]
Length = 636
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 226/657 (34%), Positives = 335/657 (50%), Gaps = 41/657 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D ++AK +V +GG++N+ + HC TRLR +KDE K + + + D V GQY
Sbjct: 2 DNQDIAKKVVEALGGRENVNSVAHCATRLRVMVKDEGKINKEVIENLDKVQGAFFNSGQY 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDA-VEGNLFDRFIALVSGLFQPMLGTLS 121
Q++ G V +Y+ V+ + G+ D ++A +GN F R I +F P+L +
Sbjct: 62 QIIFGTGTVNKMYDEVVAL-GLPTSSKEDMKEEAGKQGNWFQRAIRTFGDVFVPLLPAIV 120
Query: 122 AAGM---IKGVVA---IMAALGVA----KTDGAYVVLNAAGDGLFQFLPLILAITAAKRF 171
A G+ I+G +A I++ G K+ Y D F F P ++ +A + F
Sbjct: 121 ATGLFMGIRGAIAQDQILSLFGTTAEAFKSTNFYTYTVVLTDTAFAFFPALICWSAFRVF 180
Query: 172 KMNQFTALAIGFALV---YPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASS 228
N L +G +V PN A + + PI FFG
Sbjct: 181 GGNPLIGLVLGLMMVNSALPNAWAVASGDA------------KPIL--FFGF---IKVVG 223
Query: 229 YLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASD 288
Y ++VLP GAK+EK K IPDV+ + +VPF T L+ LA VIGPV
Sbjct: 224 YQNSVLPAFFVGLIGAKLEKWLHKRIPDVLDLLVVPFLTFLVMSILALFVIGPVFHEVES 283
Query: 289 LVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIAI 347
V T + L G+VLG QV+V+ G+H L + L G + A
Sbjct: 284 YVKVATTWLLSLPLGLGGLVLGGVHQVIVVTGVHHIFNLLESNLVTSTGADPLNAIITAA 343
Query: 348 CFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQ GA L + ++TK K++ L+ PA +SA G+TEPAI+G+ L PFIM I+GA
Sbjct: 344 MTAQLGATLAVGVKTKNPKLKALAFPAALSAGLGITEPAIFGVNLRYGKPFIMGLIAGAA 403
Query: 408 TGAYLAFFDVKMQVMG-GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIP 466
G +F + + G G+ +P + N L + + +V LGFGLT
Sbjct: 404 GG----WFANTLGLAGTSFGITIVPGTLLYLNGQILQYIFMVLVTTG-LGFGLTYAFGYK 458
Query: 467 NLFGGPSEKDAAESLDSEKE-RVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGV 525
+ +E + ++ E + + + + +P+AGEVVAL D D VF+SGAMG+G+
Sbjct: 459 DEEEVATEVETERLVEEETTGNIPVSLQNETILAPVAGEVVALADVNDPVFSSGAMGQGL 518
Query: 526 AIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQG 585
AI+PS G V APAD + + F T HA GL T +GAE+LIHVG+DTV+++G+GF V QG
Sbjct: 519 AIKPSEGVVYAPADAEVTIAFATGHAYGLKTSNGAEILIHVGIDTVSMNGEGFNHTVAQG 578
Query: 586 SKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
KVK G +L +FD I AG TT +IVTNTA+Y + + +G + G+ ++E+K
Sbjct: 579 DKVKAGDVLGTFDSAKIAAAGLEDTTMVIVTNTADYASVTPVGQGTVSKGDAVIEVK 635
>gi|146319471|ref|YP_001199183.1| Phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus suis 05ZYH33]
gi|146321668|ref|YP_001201379.1| Phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus suis 98HAH33]
gi|145690277|gb|ABP90783.1| Phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus suis 05ZYH33]
gi|145692474|gb|ABP92979.1| Phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus suis 98HAH33]
Length = 625
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 217/644 (33%), Positives = 331/644 (51%), Gaps = 28/644 (4%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TE+AK ++ +GG++N+ + HC TRLR + DE K D D + + V GQYQ+
Sbjct: 4 TEIAKKVIDALGGRENVRSVAHCATRLRVMVVDEGKIDKDTVEDIEKVQGAFFNSGQYQI 63
Query: 66 VIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+ G V +Y+ V+ + + + A +GN F R I +F P++ + A G
Sbjct: 64 IFGTGTVNKIYDEVVALGLPTATTGEQKAEAAKQGNAFQRAIRTFGDVFVPIIPAIVATG 123
Query: 125 MIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+ G+ ++ ALG + V D F LP ++ + + F NQ + +G
Sbjct: 124 LFMGLRGLLGALGYTLPEDLNVYSQILTDTAFIVLPALVVWSTFRVFGGNQTIGIVLGMM 183
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
L+ + + + + +G ++ IF F P +VLP GA
Sbjct: 184 LIAGQLPNA-------WVVASGGDVKPTIFFGFI------PVVGLQGSVLPAFIIGLVGA 230
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPVL 304
K EK +K++P+V+ + + PF TL + L VIGPV + + A I + L
Sbjct: 231 KFEKAVRKVVPEVLDLLVTPFVTLFVMSILGLFVIGPVFHVVENYILAGTQAILNLPMGL 290
Query: 305 YGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIAICFAQAGALLNIMMRTK 363
G+++G QV+V+ G+H L A L G A AQ A + + ++TK
Sbjct: 291 GGLLIGGVHQVIVVSGVHHIFNFLEAQLVANTGANPFNAIITAAMTAQGAATVAVGVKTK 350
Query: 364 EEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMG 423
K++ L+ PA +SA G+TEPAI+G+ L R PF+++ I+GA+ GA + + +
Sbjct: 351 NPKLKALAFPAALSAFLGITEPAIFGVNLRFRKPFLLSLIAGAIGGAVASLLGLAGK--- 407
Query: 424 GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESLDS 483
GMG+ IP + L +++ + +F LGF LT L FG E +AA +
Sbjct: 408 GMGVTIIPGATLYVGNGQLFQYILMVAVSFALGFALTYL------FGFEDEVEAAPKAAA 461
Query: 484 EKERVSAG----ITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPAD 539
A + E+ + SPL+G+VVALE+ D VF+SGAMGKG+A++PS G V APAD
Sbjct: 462 APVATPATPAVELNEETLVSPLSGDVVALENVNDPVFSSGAMGKGLAVKPSEGVVYAPAD 521
Query: 540 GVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDI 599
+ + F T HA GL T GAELLIH+G+DTV+++G GF V G KVK G L FD
Sbjct: 522 AEVTIAFETGHAYGLKTASGAELLIHIGIDTVSMNGNGFEKLVAAGDKVKAGTPLAKFDA 581
Query: 600 DTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
I EAG TT IIVTNTA++ ++ LA+G I G + L++ K
Sbjct: 582 AKIAEAGLDDTTMIIVTNTADFAEVSPLAEGTIAHGVEFLKVAK 625
>gi|149025008|ref|ZP_01836388.1| trehalose PTS system, IIABC component [Streptococcus pneumoniae
SP23-BS72]
gi|147929501|gb|EDK80496.1| trehalose PTS system, IIABC component [Streptococcus pneumoniae
SP23-BS72]
Length = 655
Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats.
Identities = 206/640 (32%), Positives = 316/640 (49%), Gaps = 35/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AKD++ +GGK+N+T + HC TR+RF L D+ KA+ + V GQ+Q
Sbjct: 4 FEQEAKDLLQAIGGKENVTAVTHCATRMRFVLGDDKKANVKAIESIPAVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N+ R + ++ +F P++ L
Sbjct: 64 VIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNVVQRVMTTLAEIFTPIIPALIVG 123
Query: 124 GMIKGVVAIMAALGVAKTDGAYVVLNAA------------GDGLFQFLPLILAITAAKRF 171
G+I G ++ + + DG + ++ G+ +FQFLP+ + + +++
Sbjct: 124 GLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVSRKM 183
Query: 172 KMNQFTALAIGFALVYPNIAASFT-AEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+Q + +G LV P + ++ A P + A F+ Y
Sbjct: 184 GTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTV--------NRIGYQ 235
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPV-MSWASDL 289
+ V+P + A + + +E ++K IP+V+ + VPF +L+ + LA V+GP+ + L
Sbjct: 236 AQVIPALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGL 295
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC- 348
+ G+ L+G + GA + V+ GLH + + G L IA+
Sbjct: 296 SSVVLAGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSN 355
Query: 349 FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQ A+ M +E+ Q+S+PA ISA GVTEPA++G+ + PF+ AL
Sbjct: 356 IAQGSAVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSAL 415
Query: 408 TGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPN 467
G F+V +G GL I S ++ F ++ V+ LT +
Sbjct: 416 AGMLSVTFNVTAASIGIGGLPGILSI----QPQYMLPFAGTMLVAIVVPMLLTFFFRKAG 471
Query: 468 LFG---GPSEKDAAESLDSEKERVS---AGITEQVVTSPLAGEVVALEDTPDAVFASGAM 521
LF G + A E E VS +T + SPL G+V L D VFASG M
Sbjct: 472 LFTKIEGDTNLQAEFVAQEEAEFVSHEPVELTSVEIISPLTGQVKELSQATDPVFASGVM 531
Query: 522 GKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAH 581
G+G+ IEPS GE+ +P +G + +LFPT HAIG+ +D+G ELLIH+GMDTV LDGKGF +
Sbjct: 532 GQGLVIEPSQGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESL 591
Query: 582 VVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
VVQG V GQ L+ FD+D IK AG TP+I+TN Y
Sbjct: 592 VVQGDHVIVGQQLIRFDMDVIKAAGLVTETPVIITNQDAY 631
>gi|116517080|ref|YP_817114.1| PTS system, trehalose-specific IIABC components [Streptococcus
pneumoniae D39]
gi|116077656|gb|ABJ55376.1| PTS system, trehalose-specific IIABC components [Streptococcus
pneumoniae D39]
Length = 655
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 205/640 (32%), Positives = 315/640 (49%), Gaps = 35/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AKD++ +GGK+N+T + HC TR+RF L D+ KA+ + V GQ+Q
Sbjct: 4 FEQEAKDLLQAIGGKENVTAVTHCATRMRFVLGDDKKANVKAIESIPAVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N+ + ++ +F P++ L
Sbjct: 64 VIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNVVQGVMTTLAEIFTPIIPALIVG 123
Query: 124 GMIKGVVAIMAALGVAKTDGAYVVLNAA------------GDGLFQFLPLILAITAAKRF 171
G+I G ++ + + DG + ++ G+ +FQFLP+ + + +++
Sbjct: 124 GLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVSRKM 183
Query: 172 KMNQFTALAIGFALVYPNIAASFT-AEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+Q + +G LV P + ++ A P + A F+ Y
Sbjct: 184 GTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTV--------NRIGYQ 235
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPV-MSWASDL 289
+ V+P + A + + +E ++K IP+V+ + VPF +L+ + LA V+GP+ + L
Sbjct: 236 AQVIPALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGL 295
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC- 348
+ G+ L+G + GA + V+ GLH + + G L IA+
Sbjct: 296 SSVVLAGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSN 355
Query: 349 FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQ A+ M +E+ Q+S+PA ISA GVTEPA++G+ + PF+ AL
Sbjct: 356 IAQGSAVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSAL 415
Query: 408 TGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPN 467
G F+V +G GL I S ++ F ++ V+ LT +
Sbjct: 416 AGMLSVIFNVTAASIGIGGLPGILSI----QPQYMLPFAGTMLVAIVVPMLLTFFFRKAG 471
Query: 468 LFG---GPSEKDAAESLDSEKERVSAGITEQV---VTSPLAGEVVALEDTPDAVFASGAM 521
LF G + A E E VS + E + SPL G+V L D VFASG M
Sbjct: 472 LFTKTEGDTNLQAEFVAQEEAEFVSHELVELTSVEIISPLTGQVKELSQATDPVFASGVM 531
Query: 522 GKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAH 581
G+G+ IEPS GE+ +P +G + +LFPT HAIG+ +D+G ELLIH+GMDTV LDGKGF +
Sbjct: 532 GQGLVIEPSQGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESL 591
Query: 582 VVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
VVQG V GQ L+ FD+D IK AG TP+I+TN Y
Sbjct: 592 VVQGDHVTVGQQLIRFDMDVIKAAGLVTETPVIITNQDAY 631
>gi|123441740|ref|YP_001005724.1| Putative PTS-system permease [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088701|emb|CAL11506.1| Putative PTS-system permease [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 513
Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats.
Identities = 174/512 (33%), Positives = 274/512 (53%), Gaps = 40/512 (7%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MA DY A++I+ ++GG +N+ + HC TRLRF LKD D + L + GV+TV++AG
Sbjct: 1 MAIDYALTAQEIIKYIGGDNNVITVTHCATRLRFILKDNKAVDKEKLNRVKGVITVIEAG 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL 120
GQ QVVIGNHV D Y+ V + I V A + L D ++S +F P L L
Sbjct: 61 GQMQVVIGNHVADAYKHVTNLINIDESAPVAAPKVGIVSRLMD----IISSIFAPFLYPL 116
Query: 121 SAAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
+A G+++G+++ +AA+G + G Y +LN F FLP+++A TAAK+F +N FTA+
Sbjct: 117 AACGILQGIISFLAAIGWMDAASGTYRILNFVSWTGFTFLPVMVAFTAAKKFNVNPFTAV 176
Query: 180 AIGFALVYPNIAASFTAEK-------------------------PLYTLFAGTPIESPIF 214
AL+ P+ TA K + AG P+ SP
Sbjct: 177 ITACALISPDYMNMLTANKIVTVNSADPAVQQLMHEALNNPQVAHILNTIAGIPLSSPSL 236
Query: 215 STFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPL 274
FFG+P+ + SY ++V+P+I VWA + +++ F+K++P VV+ P F + I VPL
Sbjct: 237 D-FFGIPVQY--LSYTASVIPIILMVWAMSYVQRFFEKVLPMVVRNLFTPMFCIAIMVPL 293
Query: 275 AFLVIGPVMSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ 334
LV GPV + +G ++ +Y+ SP + G ++GA WQ LV G+HWG+ P+ +
Sbjct: 294 TLLVFGPVGNLIGGAIGGVYNTLYNLSPAIAGFMVGAFWQPLVTLGVHWGITPVTVGNYA 353
Query: 335 K-GPGVILVASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLP 393
G + FA AG + + ++T+ +++ +S+ A I+ALFG+TEPAIYG+ L
Sbjct: 354 TLGYDTFTGLQASAVFAMAGTMFGVYLKTRNREMKGISLSAGITALFGITEPAIYGVALR 413
Query: 394 MRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANF 453
++ PF+ +C +G + GA F+ G+ +P F + + + FL++I F
Sbjct: 414 LKKPFLCSCAAGGIGGAIAGSFNAVSWSYCLPGIAVLPVFFKEGHMAQFLGFLLSITVAF 473
Query: 454 VLGFGLTQLIKIPNLFGGPSEKDAAESLDSEK 485
+LG T L+ G E + E DS K
Sbjct: 474 ILGAVFTWLV------GFTDEPENVEQPDSAK 499
>gi|77975407|ref|ZP_00830942.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Yersinia
frederiksenii ATCC 33641]
Length = 509
Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats.
Identities = 171/505 (33%), Positives = 273/505 (54%), Gaps = 34/505 (6%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MA DY+ A++I+ ++GG +N+ + HC TRLRF LKD D + L + GV+TV++AG
Sbjct: 1 MAIDYSLTAQEIIKYIGGDNNVITVTHCATRLRFILKDNKAVDKEKLNRVKGVITVIEAG 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL 120
GQ QVVIGNHV D Y+ V + I V A + L D ++S +F P L L
Sbjct: 61 GQMQVVIGNHVGDAYKHVTHLINIDESAPVAAPKVGIVSRLMD----IISSIFAPFLYPL 116
Query: 121 SAAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
+A G+++G+++ +AA+G + G Y +LN F FLP+++A TAAK+F +N FTA+
Sbjct: 117 AACGILQGIISFLAAIGWMDAASGTYRILNFVSWTGFTFLPVMVAFTAAKKFNVNPFTAV 176
Query: 180 AIGFALVYPNIAASFTAEK-------------------------PLYTLFAGTPIESPIF 214
AL+ P+ + TA K + AG P+ SP
Sbjct: 177 ITACALISPDYMSMLTANKIVTINSADPTVQQLMHEAVNNPQIAQILNTIAGIPLSSPTL 236
Query: 215 STFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPL 274
FFG+P+ + SY ++V+P+I VWA + +++ F++I+P VV+ P F + I VPL
Sbjct: 237 D-FFGIPVQY--LSYTASVIPIILMVWAMSYVQRFFERILPMVVRNLFTPMFCIAIMVPL 293
Query: 275 AFLVIGPVMSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ 334
LV GPV + +G ++ +Y+ SP + G ++GA WQ LV G+HWG+ P+ +
Sbjct: 294 TLLVFGPVGNLIGGAIGGVYNTLYNLSPAIAGFMVGAFWQPLVTLGVHWGITPVTVGNYA 353
Query: 335 K-GPGVILVASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLP 393
G + FA AG + + ++T+ +++ +S+ A I+ALFG+TEPAIYG+ L
Sbjct: 354 TLGYDTFTGLQASAVFAMAGTMFGVYLKTRNREMKGISLSAGITALFGITEPAIYGVALR 413
Query: 394 MRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANF 453
++ PF+ +C +G + GA F+ G+ +P F + + + L++I F
Sbjct: 414 LKKPFLCSCAAGGIGGAIAGSFNAVSWSYCLPGIAVLPVFFKEGHMTQFLGLLLSITVAF 473
Query: 454 VLGFGLTQLIKIPNLFGGPSEKDAA 478
VLG T L+ + EK +A
Sbjct: 474 VLGAVFTWLVGFTDESESAEEKTSA 498
>gi|77956344|ref|ZP_00820451.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Yersinia
bercovieri ATCC 43970]
Length = 511
Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats.
Identities = 169/490 (34%), Positives = 268/490 (54%), Gaps = 34/490 (6%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MA DY A++I+ ++GG +N+ + HC TRLRF LKD D + L + GV+TV++AG
Sbjct: 1 MAIDYALAAQEIIKYIGGDNNVITVTHCATRLRFILKDNKIVDKERLNRVKGVITVIEAG 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL 120
GQ QVVIGNHV D Y+ V ++ I V A + L D ++S +F P L L
Sbjct: 61 GQMQVVIGNHVGDAYQHVTRLISIDESAPVAAPKVGIVSRLMD----IISSIFAPFLYPL 116
Query: 121 SAAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
+A G+++G+++ +AA+G + G Y +LN F FLP+++A TAAK+F +N FTA+
Sbjct: 117 AACGILQGIISFLAAIGWMDAASGTYRILNFVSWTGFTFLPVMVAFTAAKKFNVNPFTAV 176
Query: 180 AIGFALVYPNIAASFTAEK-------------------------PLYTLFAGTPIESPIF 214
AL+ P+ TA K + AG P+ SP
Sbjct: 177 ITACALISPDYMNMLTANKITTVNSADPAVQQLMHEAVNNPQVAHILNTIAGIPLSSPTL 236
Query: 215 STFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPL 274
FFG+P+ + SY ++V+P+I VWA + +++ F++I+P VV+ P F + I VPL
Sbjct: 237 D-FFGIPVQY--LSYTASVIPIILMVWAMSYVQRFFERILPMVVRNLFTPMFCIAIMVPL 293
Query: 275 AFLVIGPVMSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ 334
LV GPV + +G ++ +Y+ SP + G ++GA WQ LV G+HWG+ P+ +
Sbjct: 294 TLLVFGPVGNLIGGAIGGVYNTLYNLSPAIAGFMVGAFWQPLVTLGVHWGITPVTVGNYA 353
Query: 335 K-GPGVILVASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLP 393
G + FA AG + + ++T+ +++ +S+ A I+ALFG+TEPAIYG+ L
Sbjct: 354 TLGYDTFTGLQASAVFAMAGTMFGVYLKTRNREMKGISLSAGITALFGITEPAIYGVALR 413
Query: 394 MRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANF 453
++ PF+ +C +G + GA F+ G+ +P F + + + FL++I F
Sbjct: 414 LKKPFLCSCAAGGIGGAVAGSFNAVSWSYCLPGIAVLPVFFKEGHMTQFLGFLLSITVAF 473
Query: 454 VLGFGLTQLI 463
VLG T L+
Sbjct: 474 VLGAVFTWLV 483
>gi|148998748|ref|ZP_01826186.1| trehalose PTS system, IIABC component [Streptococcus pneumoniae
SP11-BS70]
gi|147755442|gb|EDK62491.1| trehalose PTS system, IIABC component [Streptococcus pneumoniae
SP11-BS70]
Length = 655
Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 207/641 (32%), Positives = 320/641 (49%), Gaps = 37/641 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AKD++ +GGK+N+T + HC TR+RF L+D+ KA+ + V GQ+Q
Sbjct: 4 FEQEAKDLLQAIGGKENVTAVTHCATRMRFVLRDDKKANVKAIESIPAVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGN--LFDRFIALVSGLFQPMLGTLSA 122
V+IGN VP Y V+GI G S +A A + N + + ++ +F P++ L
Sbjct: 64 VIIGNDVPIFYNDFTAVSGIEGV-SKEATKSAAKSNQNVVQGVMTTLAEIFTPIIPALIV 122
Query: 123 AGMIKGVVAIMAALGVAKTDGAYVVLNAA------------GDGLFQFLPLILAITAAKR 170
G+I G ++ + + DG + ++ G+ +FQFLP+ + + +++
Sbjct: 123 GGLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVSRK 182
Query: 171 FKMNQFTALAIGFALVYPNIAASFT-AEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSY 229
+Q + +G LV P + ++ A P + A F+ Y
Sbjct: 183 MGTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTV--------NRIGY 234
Query: 230 LSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPV-MSWASD 288
V+P + A + + +E ++K IP+V+ + VPF +L+ + LA V+GP+ +
Sbjct: 235 QVQVIPALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQG 294
Query: 289 LVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC 348
L + G+ L+G + GA + V+ GLH + + G L IA+
Sbjct: 295 LSSVVLAGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALS 354
Query: 349 -FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGA 406
AQ A+ M +E+ Q+S+PA ISA GVTEPA++G+ + PF+ A
Sbjct: 355 NIAQGSAVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSA 414
Query: 407 LTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGF-----GL-T 460
L G F+V +G GL I S L+AIV +L F GL T
Sbjct: 415 LAGMLSVTFNVTAASIGIGGLPGILSIQPQYMLPFAGTMLVAIVVPMLLTFFFRKAGLFT 474
Query: 461 QLIKIPNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGA 520
+ NL ++ AE ++ E +T + SPL G+V L D +FASG
Sbjct: 475 KTEGDTNLQAEFVAQEEAEFVNHE----PVELTSVEIISPLTGQVKELSQATDPIFASGV 530
Query: 521 MGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTA 580
MG+G+ IEPS GE+ +P +G + +LFPT HAIG+ +D+G ELLIH+GMDTV LDGKGF +
Sbjct: 531 MGQGLVIEPSQGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFES 590
Query: 581 HVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
VVQG V GQ L+ FD+D IK AG TP+I+TN Y
Sbjct: 591 LVVQGDHVTVGQQLIRFDMDVIKAAGLVTETPVIITNQDAY 631
>gi|149013399|ref|ZP_01834102.1| trehalose PTS system, IIABC component [Streptococcus pneumoniae
SP19-BS75]
gi|147762878|gb|EDK69827.1| trehalose PTS system, IIABC component [Streptococcus pneumoniae
SP19-BS75]
Length = 655
Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 207/640 (32%), Positives = 314/640 (49%), Gaps = 35/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AKD++ +GGK+N+T + HC TR+RF L D+ KA+ + V GQ+Q
Sbjct: 4 FEQEAKDLLQAIGGKENVTAVTHCATRMRFVLGDDKKANVKAIESIPAVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N+ + ++ +F P++ L
Sbjct: 64 VIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNVVQGVMTTLAEIFTPIIPALIVG 123
Query: 124 GMIKGVVAIMAALGVAKTDGAYVVLNAA------------GDGLFQFLPLILAITAAKRF 171
G+I G ++ + + DG + ++ G+ +FQFLP+ + + +++
Sbjct: 124 GLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVSRKM 183
Query: 172 KMNQFTALAIGFALVYPNIAASFT-AEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+Q + +G LV P + ++ A P + A F+ Y
Sbjct: 184 GTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTV--------NRIGYQ 235
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPV-MSWASDL 289
+ V+P + A + + +E ++K IP+V+ + VPF +L+ + LA V+GP+ + L
Sbjct: 236 AQVIPALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGL 295
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC- 348
+ G+ L+G + GA + V+ GLH + + G L IA+
Sbjct: 296 SSVVLAGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSN 355
Query: 349 FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQ A+ M +E+ Q+S+PA ISA GVTEPA++G+ + PF+ AL
Sbjct: 356 IAQGSAVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSAL 415
Query: 408 TGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPN 467
G F+V +G GL I S L+AIV +L F +
Sbjct: 416 AGMLSVTFNVTAASIGIGGLPGILSIQPQYMLPFAGTMLVAIVVPMLLTFFFCK----AG 471
Query: 468 LFG---GPSEKDAAESLDSEKERVS---AGITEQVVTSPLAGEVVALEDTPDAVFASGAM 521
LF G + A E E VS +T + SPL G+V L D VFASG M
Sbjct: 472 LFTKTEGDTNLQAEFVAQEEAEFVSHEPVELTSVEIISPLTGQVKELSQATDPVFASGVM 531
Query: 522 GKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAH 581
G+G+ IEPS GE+ +P +G + +LFPT HAIG+ +D+G ELLIH+GMDTV LDGKGF +
Sbjct: 532 GQGLVIEPSQGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESL 591
Query: 582 VVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
VVQG V GQ L+ FD+D IK AG TP+I+TN Y
Sbjct: 592 VVQGDHVTVGQQLIRFDMDVIKAAGLVTETPVIITNQDAY 631
>gi|156934710|ref|YP_001438626.1| hypothetical protein ESA_02545 [Enterobacter sakazakii ATCC
BAA-894]
gi|156532964|gb|ABU77790.1| hypothetical protein ESA_02545 [Enterobacter sakazakii ATCC
BAA-894]
Length = 618
Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 210/644 (32%), Positives = 343/644 (53%), Gaps = 38/644 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y A+ I+ +GG+ NI L HC+TRLRFSL K D L DGV+ V +G Q+
Sbjct: 2 NYPHTARQIITLLGGEANILSLYHCITRLRFSLVSLEKVDRAALEHLDGVMGVNLSGDQF 61
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAA 123
QV+IG+ V + + +L A + G + A N + ++G+F P++ ++ A
Sbjct: 62 QVIIGSEVAPLCQAIL--AQLPGLEAKKAAAPPKRRNPISMVLEGLAGIFSPIIPAIAGA 119
Query: 124 GMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIG 182
G++KGV+++ ALG V ++ Y +L A DG+F F+PL+LA +A +F N + A+A+
Sbjct: 120 GILKGVLSLCLALGWVQASNQTYQILMAISDGVFFFMPLVLAFSAGNKFGANPYVAVALA 179
Query: 183 FALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWA 242
L +P + L +G P+ F GLP+ + SY S+V+P++ AV
Sbjct: 180 ATLFHPMLTT---------LLKSGAPV------AFLGLPVS--SVSYASSVIPILLAVLL 222
Query: 243 GAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTG--IYDF 300
+ +E+ +++P V+K VP +L+I P+ + IGP A L+G +G I+
Sbjct: 223 LSYVERFIDRLMPAVLKTMFVPLLSLVIVAPVTLIAIGP----AGILLGNALSGGIIWLV 278
Query: 301 SPV--LYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLN 357
+ + L G+++G ++++ G+H+ LVP+ I + K G + QAGA
Sbjct: 279 ANMGWLAGVIVGGTLSLMIITGMHYVLVPIVINNISKLGYDPFKILFYVANMGQAGAAFG 338
Query: 358 IMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDV 417
+ +R + +K++ L++ SA G+TEPA+YGI + + PF I GA GA+ V
Sbjct: 339 VFLRARNKKIKTLALSTSFSAAMGITEPAMYGINIRFKRPFAAALIGGACGGAFAMALGV 398
Query: 418 KMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDA 477
K G+ IP+ + + FL A+ A+ + F LI + F P+E A
Sbjct: 399 KTYAFALSGIPGIPALVGPT-------FLWAL-ASLAIAFCAAALITVMLGFEEPAEAPA 450
Query: 478 AESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAP 537
+ + V+ EQ+ +P++G + L D VFA GKG+AI P GE+++P
Sbjct: 451 EPEVVAGLSPVALAREEQLF-APVSGRLTPLSSLSDPVFADEIFGKGIAIVPESGELLSP 509
Query: 538 ADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSF 597
+G I +F +NHA+ L +D GAE+LIH+G+DTV L G+ FT HV G+ V+ GQ L+SF
Sbjct: 510 VNGRIEAIFDSNHALTLRSDCGAEVLIHIGIDTVKLGGQHFTRHVENGAFVEAGQPLISF 569
Query: 598 DIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
D+ + + +IVTNT Y +I L +G++ L+L
Sbjct: 570 DLAALNALHIDPSVIVIVTNTHCYGEISPLKQGDVAPREAFLKL 613
>gi|148994656|ref|ZP_01823781.1| trehalose PTS system, IIABC component [Streptococcus pneumoniae
SP9-BS68]
gi|147927124|gb|EDK78163.1| trehalose PTS system, IIABC component [Streptococcus pneumoniae
SP9-BS68]
Length = 655
Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 206/640 (32%), Positives = 317/640 (49%), Gaps = 35/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AKD++ +GGK+N+T + HC TR+RF L D+ KA+ + V GQ+Q
Sbjct: 4 FEQEAKDLLQAIGGKENVTAVTHCATRMRFVLGDDKKANVKAIESIPAVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N+ + ++ +F P++ L
Sbjct: 64 VIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNVVQCVMTTLAEIFTPIIPALIVG 123
Query: 124 GMIKGVVAIMAALGVAKTDGAYVVLNAA------------GDGLFQFLPLILAITAAKRF 171
G+I G ++ + + DG + ++ G+ +FQFLP+ + + +++
Sbjct: 124 GLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVSRKM 183
Query: 172 KMNQFTALAIGFALVYPNIAASFT-AEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+Q + +G LV P + ++ A P + A F+ Y
Sbjct: 184 GTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTV--------NRIGYQ 235
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPV-MSWASDL 289
+ V+P + A + + +E ++K IP+V+ + VPF +L+ + LA V+GP+ + L
Sbjct: 236 AQVIPALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGL 295
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC- 348
+ G+ L+G + GA + V+ GLH + + G L IA+
Sbjct: 296 SSVVLAGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSN 355
Query: 349 FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQ A+ M +E+ Q+S+PA ISA GVTEPA++G+ + PF+ AL
Sbjct: 356 IAQGSAVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSAL 415
Query: 408 TGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGF-----GL-TQ 461
G F+V +G GL I S L+AIV +L F GL T+
Sbjct: 416 AGMLSVTFNVTAASIGIGGLPGILSIQPQYMLPFAGTMLVAIVVPMLLTFFFRKAGLFTK 475
Query: 462 LIKIPNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAM 521
NL ++ AE ++ E +T + SPL G+V L D +FASG M
Sbjct: 476 TEGDTNLQAEFVAQEEAEFVNHE----PVELTSVEIISPLTGQVKELSQATDPIFASGVM 531
Query: 522 GKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAH 581
G+G+ IEPS GE+ +P +G + +LFPT HAIG+ +D+G ELLIH+GMDTV LDGKGF +
Sbjct: 532 GQGLVIEPSQGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESL 591
Query: 582 VVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
VVQG V GQ L+ FD+D IK AG TP+I+TN Y
Sbjct: 592 VVQGDHVTVGQQLIRFDMDVIKAAGLVTETPVIITNQDAY 631
>gi|149006461|ref|ZP_01830160.1| trehalose PTS system, IIABC component [Streptococcus pneumoniae
SP18-BS74]
gi|147761759|gb|EDK68722.1| trehalose PTS system, IIABC component [Streptococcus pneumoniae
SP18-BS74]
Length = 655
Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 206/641 (32%), Positives = 318/641 (49%), Gaps = 37/641 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AKD++ +GGK+N+T + HC TR+RF L+D+ KA+ + V GQ+Q
Sbjct: 4 FEQEAKDLLQAIGGKENVTAVTHCATRMRFVLRDDKKANVKAIESIPAVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGN--LFDRFIALVSGLFQPMLGTLSA 122
V+IGN VP Y V+GI G S +A A + N + + ++ +F P++ L
Sbjct: 64 VIIGNDVPIFYNDFTAVSGIEGV-SKEATKSAAKSNQNVVQGVMTTLAEIFTPIIPALIV 122
Query: 123 AGMIKGVVAIMAALGVAKTDGAYVVLNAA------------GDGLFQFLPLILAITAAKR 170
G+I G ++ + + DG + ++ G+ +FQFLP+ + + +++
Sbjct: 123 GGLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVSRK 182
Query: 171 FKMNQFTALAIGFALVYPNIAASFT-AEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSY 229
+Q + +G LV P + ++ A P + A F+ Y
Sbjct: 183 MGTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTV--------NRIGY 234
Query: 230 LSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPV-MSWASD 288
+ V+P + A + + +E ++K IP+V+ + VPF +L+ + LA V+GP+ +
Sbjct: 235 QAQVIPALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQG 294
Query: 289 LVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC 348
L + G+ L+G + GA + V+ GLH + + G L IA+
Sbjct: 295 LSSVVLAGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALS 354
Query: 349 -FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGA 406
AQ A+ M +E Q+S+PA ISA GVTEPA++G+ + PF+ A
Sbjct: 355 NIAQGSAVFAYYFMHRHDECEAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSA 414
Query: 407 LTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIP 466
L G F+V +G GL I S ++ F ++ V+ LT +
Sbjct: 415 LAGMLSVTFNVTAASIGIGGLPGILSI----QPQYMLPFAGTMLVAIVVPMLLTFFFRKA 470
Query: 467 NLFG---GPSEKDAAESLDSEKERVS---AGITEQVVTSPLAGEVVALEDTPDAVFASGA 520
LF G + A E E VS +T + SPL G+V L D VFASG
Sbjct: 471 GLFTKIEGDTNLQAEFVAQEEAEFVSHEPVELTSVEIISPLTGQVKELSQATDPVFASGV 530
Query: 521 MGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTA 580
MG+G+ IEPS GE+ +P +G + +LFPT HAIG+ +D+G ELLIH+GMDTV LDGKGF +
Sbjct: 531 MGQGLVIEPSQGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFES 590
Query: 581 HVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
VVQG V GQ L+ FD+D IK AG TP+I+TN Y
Sbjct: 591 LVVQGDHVIVGQQLIRFDMDVIKAAGLVTETPVIITNQDAY 631
>gi|148984336|ref|ZP_01817631.1| trehalose PTS system, IIABC component [Streptococcus pneumoniae
SP3-BS71]
gi|147923625|gb|EDK74738.1| trehalose PTS system, IIABC component [Streptococcus pneumoniae
SP3-BS71]
Length = 655
Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 206/640 (32%), Positives = 317/640 (49%), Gaps = 35/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AKD++ +GGK+N+T + HC TR+RF L D+ KA+ + V GQ+Q
Sbjct: 4 FEQEAKDLLQAIGGKENVTAVTHCATRMRFVLGDDKKANVKAIESIPAVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N+ + ++ +F P++ L
Sbjct: 64 VIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNVVQGVMTTLAEIFTPIIPALIVG 123
Query: 124 GMIKGVVAIMAALGVAKTDGAYVVLNAA------------GDGLFQFLPLILAITAAKRF 171
G+I G ++ + + DG + ++ G+ +FQFLP+ + + +++
Sbjct: 124 GLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVSRKM 183
Query: 172 KMNQFTALAIGFALVYPNIAASFT-AEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+Q + +G LV P + ++ A P + A F+ Y
Sbjct: 184 GTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTV--------NRIGYQ 235
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPV-MSWASDL 289
+ V+P + A + + +E ++K IP+V+ + VPF +L+ + LA V+GP+ + L
Sbjct: 236 AQVIPALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGL 295
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC- 348
+ G+ L+G + GA + V+ GLH + + G L IA+
Sbjct: 296 SSVVLAGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSN 355
Query: 349 FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQ A+ M +E+ Q+S+PA ISA GVTEPA++G+ + PF+ AL
Sbjct: 356 IAQGSAVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSAL 415
Query: 408 TGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGF-----GL-TQ 461
G F+V +G GL I S L+AIV +L F GL T+
Sbjct: 416 AGMLSVTFNVTAASIGIGGLPGILSIQPQYMLPFAGTMLVAIVVPMLLTFFFRKAGLFTK 475
Query: 462 LIKIPNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAM 521
NL ++ AE ++ E +T + SPL G+V L D +FASG M
Sbjct: 476 TEGDTNLQAEFVAQEEAEFVNHE----PVELTSVEIISPLTGQVKELSQATDPIFASGVM 531
Query: 522 GKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAH 581
G+G+ IEPS GE+ +P +G + +LFPT HAIG+ +D+G ELLIH+GMDTV LDGKGF +
Sbjct: 532 GQGLVIEPSQGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESL 591
Query: 582 VVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
VVQG V GQ L+ FD+D IK AG TP+I+TN Y
Sbjct: 592 VVQGDHVTVGQQLIRFDMDVIKAAGLVTETPVIITNQDAY 631
>gi|4581477|emb|CAB09690.1| enzyme II sucrose protein [Lactococcus lactis]
Length = 650
Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats.
Identities = 197/663 (29%), Positives = 338/663 (50%), Gaps = 40/663 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
++ ++A+ I+ VG +DNI HC TRLR LKD D + L + +A GQY
Sbjct: 2 NHKQVAERILNAVG-RDNIQGARHCATRLRLVLKDTGVIDQEALDNDPDLKGTFEAAGQY 60
Query: 64 QVVIG-NHVPDVYETVLKVAGISGEGSVDADDDA---VEGNLFDRFIALVSGLFQPMLGT 119
Q+++G V VYE +K+ GIS + D + A + N + L+S +F P++
Sbjct: 61 QIIVGPGDVNTVYEEFIKLTGISEASTADLKEIAGSQKKQNPVMALVKLLSDIFVPLIPA 120
Query: 120 LSAAGMIKGVVAIMAALGVAKTD----------GAYVVLNAAGDGLFQFLPLILAITAAK 169
L A G++ + + A + T G ++N F F+P+++ +A K
Sbjct: 121 LVAGGLLMALNNALTAEHLFATKSLVEMFPMWKGFADIVNTMSAAPFTFMPILIGYSATK 180
Query: 170 RFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSY 229
RF N + +G +V P + + + + + + FG + + Y
Sbjct: 181 RFGGNPYLGAVVGMIMVMPGLINGYNVAEAISN-------HTMTYWDIFGFKV--AQAGY 231
Query: 230 LSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDL 289
VLPVI + AK+E+ F K + D + P +++IT L F ++GP + + S+
Sbjct: 232 QGQVLPVIGVAFILAKLERFFHKYLNDAIDFTFTPLLSVIITGFLTFTIVGPALRFVSNG 291
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL----QKGPGVILVASI 345
+ G+Y+ L +V G + +V+ GLH + + + G G + +
Sbjct: 292 LTDGLVGLYNTLGALGMLVFGGFYSAIVVTGLHQSFPAIETMLITNYQHSGIGGDFIFPV 351
Query: 346 AIC--FAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCI 403
A C AQAGA I+ TK K + L+ PA +SA+ G+TEPA++GI L ++ PF +
Sbjct: 352 AACANMAQAGATFAILFVTKNIKTKALAAPAGVSAILGITEPALFGINLKLKYPFFIALG 411
Query: 404 SGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQL- 462
+ A+ ++ F V +G GL S N + F+I+I +F++ F +T +
Sbjct: 412 ASAIGSLFMGLFHVLAVSLGSAGLIGFISIKAGYN----LQFMISIFISFLIAFVVTSIY 467
Query: 463 ---IKIPNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASG 519
++ ++ ++++A EK + + + +P+ G V+ L D D VF+
Sbjct: 468 GRRMEAKSITKEKNKQNATTQYQPEKVIIDP-VKSGELLAPINGFVIPLSDVSDPVFSKE 526
Query: 520 AMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFT 579
MGKG+AI+P GE+ +PADG I + + T HA G+ T +G E+L+H+G+DTV+++G GF
Sbjct: 527 IMGKGIAIKPKSGELFSPADGEIIIAYETGHAYGIKTKNGGEVLLHIGIDTVSMNGNGFI 586
Query: 580 AHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKG-EIQLGNQL 638
+V G KVK G LL SFD + IK++G T I++TN+A+Y +I L++ +I++G ++
Sbjct: 587 QNVKVGQKVKAGDLLGSFDKEEIKKSGLDDTVIIVITNSASYNEILPLSENVDIKVGEKI 646
Query: 639 LEL 641
L L
Sbjct: 647 LLL 649
>gi|29377861|ref|NP_816989.1| PTS system, IIABC components [Enterococcus faecalis V583]
gi|29345313|gb|AAO83060.1| PTS system, IIABC components [Enterococcus faecalis V583]
Length = 643
Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats.
Identities = 206/668 (30%), Positives = 328/668 (49%), Gaps = 55/668 (8%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY +LA DI+ VG KDN+ HC TRLR LKD +K + L + V K GQY
Sbjct: 2 DYAKLASDIILAVG-KDNLIAAAHCATRLRLVLKDNTKVNQKALDENPNVKGTFKIDGQY 60
Query: 64 QVVIG-NHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALV---SGLFQPMLGT 119
QV+IG V VY+ ++K G+S + D + F+ +AL+ S +F P++
Sbjct: 61 QVIIGAGDVNFVYDELIKKTGLSELSTDDLKQIVDKNKKFNPIMALIKLLSEIFVPIIPA 120
Query: 120 LSAAGMIKGVVAIMAALGV----------AKTDGAYVVLNAAGDGLFQFLPLILAITAAK 169
L A G++ + + A G+ G ++ F FLP+++ I+AAK
Sbjct: 121 LVAGGLLMALRNFLTAAGLFGPKSIEEMYPAIKGISSMIQLMSAAPFMFLPILVGISAAK 180
Query: 170 RFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSY 229
RF NQF AIG + P++ + + FG + ++Y
Sbjct: 181 RFGANQFLGAAIGMIMTTPDLGGATE------------------YWNIFGYHV--AQTNY 220
Query: 230 LSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDL 289
V+PV+A+V+ + +EK F K +P + P +++IT L F VIGP M S+
Sbjct: 221 AYQVIPVLASVYLLSILEKYFHKKLPSSIDFTFTPLLSVIITGFLTFTVIGPTMLLLSNG 280
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-------GPGVILV 342
+ +Y+ + + + G + ++VM GLH + L G + +V
Sbjct: 281 ITDAIVWLYNATGFIGMGIFGGTYSLIVMTGLHQSFPAIETQLLSAWTNGIGHGDFIFVV 340
Query: 343 ASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTC 402
AS+A AQ A I TK K + L+ A +SAL G+TEPA++G+ L R PF
Sbjct: 341 ASMA-NVAQGAATFAIWFLTKNSKTKSLASSAGLSALLGITEPALFGVNLKYRFPFFCAL 399
Query: 403 ISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQL 462
I + A V +G G S N+ ++ +L+ + +F + F +T
Sbjct: 400 IGSGIAAAITGLLKVVAVSLGSAGFLGFLSI----NATSIPFYLLCELISFSVTFAITYF 455
Query: 463 ---IKIPNLFGGP-----SEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDA 514
+ ++F + D +E ++ T + + SPLAGE+ L D
Sbjct: 456 YGRTRSSSIFAAEAIAEQTSVDTSEINTNQIANADEPTTVETIVSPLAGEITTLGSVNDP 515
Query: 515 VFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALD 574
VF+S ++GKG+AI+P+ + +P DG+++++F T HA L ++ GAE+LIHVG+DTV+L+
Sbjct: 516 VFSSESIGKGIAIKPNGNTIYSPVDGIVQVVFETGHAYDLKSNTGAEILIHVGIDTVSLN 575
Query: 575 GKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQL 634
GKGFT V KVKKG++L +FD I +G TT +IVTN+ +Y ++ + K +
Sbjct: 576 GKGFTKKVGAKQKVKKGEVLGTFDSTVITNSGLDDTTMVIVTNSKDYSEVIPITKNIVTE 635
Query: 635 GNQLLELK 642
G LL +K
Sbjct: 636 GAALLTIK 643
>gi|77962633|ref|ZP_00826451.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Yersinia
mollaretii ATCC 43969]
Length = 511
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 165/490 (33%), Positives = 267/490 (54%), Gaps = 34/490 (6%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MA DY A++I+ ++GG +N+ + HC TRLRF LKD D + L + GV+TV++AG
Sbjct: 1 MAIDYALAAQEIIKYIGGDNNVINVTHCATRLRFILKDNKVVDKERLNRVKGVITVIEAG 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL 120
GQ QVVIGNHV D Y+ V ++ I + A + R I ++S +F P L L
Sbjct: 61 GQMQVVIGNHVGDAYQHVTRLINIDESAPIAAPKVGI----VSRLIDIISSIFAPFLYPL 116
Query: 121 SAAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
+A G+++G+++ +AA+G + G Y +LN F FLP+++A TAAK+F +N FTA+
Sbjct: 117 AACGILQGIISFLAAIGWMDAASGTYRILNFVSWTGFTFLPVMVAFTAAKKFNVNPFTAV 176
Query: 180 AIGFALVYPNIAASFTAEK-------------------------PLYTLFAGTPIESPIF 214
AL+ P+ TA K + AG P+ SP
Sbjct: 177 ITACALISPDYMNMLTANKITTVNSADPAVQQLMHEAVNNPQVAHILNTIAGIPLSSPTL 236
Query: 215 STFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPL 274
FFG+P+ + SY ++V+P+I VWA + +++ F++I+P VV+ P F + I VPL
Sbjct: 237 D-FFGIPVQY--LSYTASVIPIILMVWAMSYVQRFFERILPMVVRNLFTPMFCIAIMVPL 293
Query: 275 AFLVIGPVMSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ 334
LV GP+ + +G ++ +Y+ SP + G ++GA WQ LV G+HWG+ P+ +
Sbjct: 294 TLLVFGPIGNLIGGAIGGVYNTLYNLSPAIAGFMVGAFWQPLVTLGVHWGITPVTVGNYA 353
Query: 335 K-GPGVILVASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLP 393
G + FA AG + + ++T+ +++ +S+ A ++ALFG+TEPAIYG+ L
Sbjct: 354 TLGYDTFTGLQASAVFAMAGTMFGVYLKTRNREMKGISLSAGLTALFGITEPAIYGVALR 413
Query: 394 MRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANF 453
++ PF+ +C +G + GA F+ G+ +P F + + + L++I F
Sbjct: 414 LKKPFLCSCAAGGIGGAIAGSFNAVSWSYCLPGIAVLPVFFKEGHMTQFLGLLLSITVAF 473
Query: 454 VLGFGLTQLI 463
VLG T L+
Sbjct: 474 VLGAVFTWLV 483
>gi|145956299|ref|ZP_01805296.1| hypothetical protein CdifQ_04000408 [Clostridium difficile
QCD-32g58]
Length = 569
Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats.
Identities = 197/593 (33%), Positives = 315/593 (53%), Gaps = 42/593 (7%)
Query: 60 GGQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGT 119
G Q+QVVIGN V DVY+ +LKV + S ++ + NL RFI + +FQP++
Sbjct: 6 GAQFQVVIGNSVVDVYDEILKVCPLDTNDSTVKTEEKI--NLGTRFIEFIINIFQPLIFA 63
Query: 120 LSAAGMIKGVVAIMAALGVAKTDGA-YVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTA 178
++ AG++K ++ ++A + K+D Y +L A D F FLPL++A+T A K N+ A
Sbjct: 64 IAGAGILKSLLMLLAMFNILKSDSTIYTLLVAISDATFYFLPLMVAVTTANVLKCNRLVA 123
Query: 179 LAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIA 238
+A A+ Y + A+ TA LF T P +Y + V P I
Sbjct: 124 IA---AVGYLLLPATTTALSEGVELFGFT----------------IPNIAYNAQVFPAIL 164
Query: 239 AVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIY 298
V A +EK F K P ++ F VP +L ITVP+ ++GP+ + + +Y
Sbjct: 165 CVSFLATMEKIFNKYSPKPIRTFFVPMMSLAITVPITLTILGPLGYNVGTIFTTIILFLY 224
Query: 299 DFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK--GPGVILVASIAICFAQAGALL 356
+ L +L A +V G+H L+P +I + K + + +S+A +++GA
Sbjct: 225 NKMGFLVVGLLAAFLPFMVATGMHKALIPYSINTIGKLGYEALYMTSSLAHNISESGACF 284
Query: 357 NIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFD 416
+ +RTK+E ++Q ++ A ISAL G+TEPA+YGITL + + S A++G +L F
Sbjct: 285 AVALRTKDETLKQTALSAGISALMGITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFA 344
Query: 417 VKMQVMGGMGLFAIPSFIEASNSMTLIH----FLIAIVANFVLGFGLTQLIKIPNLFGGP 472
VK V+ G GL ++ FI+ +N LI F+IAI+ +F++ L
Sbjct: 345 VKGFVIVGPGLASMSMFIDPNNGNNLIFASIGFVIAILGSFII-----------TLIIWK 393
Query: 473 SEKDAAESL--DSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPS 530
+ + ES D +E + ++ +P+ G+V+ L D +FAS +G GVAI P+
Sbjct: 394 EDTNTVESSIGDVVEEELEEEKEVNILVTPVEGKVIDLSKVNDELFASKTLGDGVAIIPT 453
Query: 531 VGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKK 590
G + AP D + +LF T HAIGL T +GAE+LIH+G++TV+++G GF V G VK+
Sbjct: 454 NGNLYAPCDSEVVMLFETKHAIGLRTKNGAEILIHIGINTVSMNGDGFKTFVKTGDNVKE 513
Query: 591 GQLLLSFDIDTIKEAGYPVTTPIIVTNTANYK-QIEVLAKGEIQLGNQLLELK 642
G LL+ FD+D I A T I+ N A+Y ++ + G ++ G+ L ++K
Sbjct: 514 GDLLIQFDLDKISHANLDSTVMIVNNNGADYAYKVLNQSYGNVKKGSILFDVK 566
>gi|15901712|ref|NP_346316.1| trehalose PTS system, IIABC components [Streptococcus pneumoniae
TIGR4]
gi|111656902|ref|ZP_01407729.1| hypothetical protein SpneT_02001848 [Streptococcus pneumoniae
TIGR4]
gi|14973388|gb|AAK75956.1| trehalose PTS system, IIABC components [Streptococcus pneumoniae
TIGR4]
Length = 655
Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats.
Identities = 206/640 (32%), Positives = 316/640 (49%), Gaps = 35/640 (5%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AKD++ +GGK+N+T + HC TR+RF L D+ KA+ + V GQ+Q
Sbjct: 4 FEQEAKDLLQAIGGKENVTAVTHCATRMRFVLGDDKKANVKAIESIPAVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N+ + ++ +F P++ L
Sbjct: 64 VIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNVVQGVMTTLAEIFTPIIPALIVG 123
Query: 124 GMIKGVVAIMAALGVAKTDGAYVVLNAA------------GDGLFQFLPLILAITAAKRF 171
G+I G ++ + + DG + ++ G+ +FQFLP+ + + +++
Sbjct: 124 GLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVSRKM 183
Query: 172 KMNQFTALAIGFALVYPNIAASFT-AEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+Q + +G LV P + ++ A P + A F+ Y
Sbjct: 184 GTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTV--------NRIGYQ 235
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPV-MSWASDL 289
+ V+P + A + + +E + K IP+V+ + VPF +L+ + LA V+GP+ + L
Sbjct: 236 AQVIPALLAGLSLSYLEIFWHKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGL 295
Query: 290 VGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC- 348
+ G+ L+G + GA + V+ GLH + + G L IA+
Sbjct: 296 SSVVLAGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSN 355
Query: 349 FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQ A+ M +E+ Q+S+PA ISA GVTEPA++G+ + PF+ AL
Sbjct: 356 IAQGSAVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSAL 415
Query: 408 TGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGF-----GL-TQ 461
G F+V +G GL I S L+AIV +L F GL T+
Sbjct: 416 AGMLSVTFNVTAASIGIGGLPGILSIQPQYMLPFAGTMLVAIVVPMLLTFFFRKAGLFTK 475
Query: 462 LIKIPNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAM 521
NL ++ AE ++ E +T + SPL G+V L D +FASG M
Sbjct: 476 TEGDTNLQAEFVAQEEAEFVNHE----PVELTSVEIISPLTGQVKELSQATDPIFASGVM 531
Query: 522 GKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAH 581
G+G+ IEPS GE+ +P +G + +LFPT HAIG+ +D+G ELLIH+GMDTV LDGKGF +
Sbjct: 532 GQGLVIEPSQGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESL 591
Query: 582 VVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
VVQG V GQ L+ FD+D IK AG TP+I+TN Y
Sbjct: 592 VVQGDHVTVGQQLIRFDMDVIKAAGLVTETPVIITNQDAY 631
>gi|19746751|ref|NP_607887.1| putative sucrose-specific PTS permease, enzyme II [Streptococcus
pyogenes MGAS8232]
gi|19748981|gb|AAL98386.1| putative sucrose-specific PTS permease, enzyme II [Streptococcus
pyogenes MGAS8232]
Length = 627
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 206/653 (31%), Positives = 326/653 (49%), Gaps = 41/653 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D ++A +++ +GG++N+ + HC TRLR + DE K D + D V GQY
Sbjct: 2 DNRQIAAEVIEALGGRENVRSVAHCATRLRVMVYDEGKIDKEKAEAIDKVKGAFFNSGQY 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
Q++ G V ++Y+ V+ + + S + +GN+F R I +F P++ + A
Sbjct: 62 QMIFGTGTVNNIYDEVVALGLPTSSTSEQKAEAGKQGNIFQRAIRTFGDVFVPIIPAIVA 121
Query: 123 AGMIKGV------VAIMAALGVAKTDGAYVVLNAA-GDGLFQFLPLILAITAAKRFKMNQ 175
G+ GV AIM GV + +++ D F +LP ++A +A + F N
Sbjct: 122 TGLFMGVRGLATQPAIMDLFGVHEYGENFLMYTRILTDTAFVYLPALVAWSAFRVFGGNP 181
Query: 176 FTALAIGFALV---YPN--IAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+ +G LV PN + AS KPL TFFG P Y
Sbjct: 182 IIGIVLGLMLVSNELPNAWVVASGGDVKPL---------------TFFGF---VPVVGYQ 223
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLV 290
TVLP GAK+EK K +P+ + + + PF T I L VIGPV +LV
Sbjct: 224 GTVLPAFFVGLVGAKLEKWLHKKVPEALDLLVTPFLTFAIMSILGLFVIGPVFHSLENLV 283
Query: 291 GALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIAICF 349
A + + G+++G Q++V+ G+H L A L G A
Sbjct: 284 LAGTQAVLHLPFGIAGLIVGGIQQLIVVTGIHHIFNFLEAQLIANTGKDPFNAYLTAATV 343
Query: 350 AQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTG 409
AQAGA L + ++TK K++ L+ P+ +SAL G+TEPAI+G+ L F+ I GAL G
Sbjct: 344 AQAGATLAVAVKTKSPKLKGLAFPSTLSALLGITEPAIFGVNLRYPKVFVSGLIGGALGG 403
Query: 410 AYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLF 469
F + G+G+ +P + N L+ +L+ ++ + FG+ +
Sbjct: 404 WVAGLFGIAGT---GLGITVLPGTLLYLNGQ-LLQYLVTMLVGLGVAFGIAYTWGYQD-- 457
Query: 470 GGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEP 529
E +++ ++ + E+ + SPL G VV L D VF+SGAMG+G+AI+P
Sbjct: 458 ---RETLPLPAVEVDQTADQPALAEETLYSPLNGTVVDLSAVSDPVFSSGAMGQGLAIKP 514
Query: 530 SVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVK 589
+ +P DG + ++F T HA + + GAE+L+H+G+DTV++ G GF + V G VK
Sbjct: 515 EDNTLYSPVDGKVEIVFETGHAYAITSSQGAEVLLHIGIDTVSMAGDGFESLVAVGQAVK 574
Query: 590 KGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
KG LL FD I EAG TT +IVTN+A+Y+ +++LA+G + +G+Q+ +K
Sbjct: 575 KGDLLGHFDPSKIAEAGLDDTTMMIVTNSADYQSVDILAQGHVLIGDQVALIK 627
>gi|125717321|ref|YP_001034454.1| Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific, putative
[Streptococcus sanguinis SK36]
gi|125497238|gb|ABN43904.1| Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific, putative
[Streptococcus sanguinis SK36]
Length = 636
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 222/660 (33%), Positives = 335/660 (50%), Gaps = 51/660 (7%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
T++AK ++ +GG++N+ + HC TRLR +KDE K D + + + V GQYQ+
Sbjct: 4 TDIAKKVIEALGGRENVNSVAHCATRLRVMVKDEGKIDKNTVENLEKVQGAFFNSGQYQI 63
Query: 66 VIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+ G V +Y+ V+ + + + A +GN F R I +F P+L + A G
Sbjct: 64 IFGTGTVNKIYDEVVALGLPTSSKDDMKVEAAKQGNWFQRAIRTFGDVFVPLLPAIVATG 123
Query: 125 M---IKGVVA---IMAALGVA----KTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMN 174
+ I+G +A +++ G K Y D F F P ++ +A + F N
Sbjct: 124 LFMGIRGAIAQDQVLSLFGTTADAFKATNFYTYTVVLTDTAFAFFPALICWSAFRVFGGN 183
Query: 175 QFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVL 234
L +G +V + ++ + PI FFG Y ++VL
Sbjct: 184 PLIGLVLGLMMVNSALPNAWDV---------ASGDAKPIL--FFGF---IKVVGYQNSVL 229
Query: 235 PVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALF 294
P GAK+EK K IPDV+ + +VPF T L+ LA VIGPV V
Sbjct: 230 PAFFVGLIGAKLEKWLHKRIPDVLDLLVVPFLTFLVMSILALFVIGPVFHDVESYVKVAT 289
Query: 295 TGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIAICFAQAG 353
T + L G+VLG QV+V+ G+H L + L G + A AQ G
Sbjct: 290 TWLLSLPFGLGGLVLGGVHQVIVVTGVHHIFNLLESNLVTSTGADPLNAIITAAMTAQLG 349
Query: 354 ALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLA 413
A L + ++TK K++ L+ PA +SA G+TEPAI+G+ L PF++ +GA+ G +LA
Sbjct: 350 ATLAVGVKTKNPKLKALAFPAALSAGLGITEPAIFGVNLRFVKPFVIGLGAGAV-GGWLA 408
Query: 414 FFDVKMQVMG----GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLF 469
+MG G+ IP + N L+ ++ +V L F LT L F
Sbjct: 409 ------SIMGLAGTSFGITIIPGTLLYLNGQ-LLQYIFMVVLTTGLSFVLTYL------F 455
Query: 470 GGPSEKDAAESLDSEKE-------RVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMG 522
G E+ A E ++E+ V A + ++ + SP+ G+ VAL D D VF+SGAMG
Sbjct: 456 GYKDEETAGEKAETEELVEEETTGNVPASLQDETIISPIVGQAVALSDVNDPVFSSGAMG 515
Query: 523 KGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHV 582
+G+AI+PS G V APAD + + F T HA GL T +GAE+LIHVG+DTV++ G+GF V
Sbjct: 516 RGIAIKPSEGVVYAPADAEVTIAFETGHAYGLKTANGAEILIHVGIDTVSMGGEGFDQKV 575
Query: 583 VQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
QG KVK G +L +F+ + I AG TT +IVTNTA+Y + +A+G + G+ ++E+K
Sbjct: 576 AQGDKVKAGDVLGTFEAEKIAAAGLDDTTMVIVTNTADYASVTPVAEGALAKGDAIIEVK 635
>gi|116629069|ref|YP_814241.1| sucrose PTS, EIIBCA [Lactobacillus gasseri ATCC 33323]
gi|116094651|gb|ABJ59803.1| sucrose PTS, EIIBCA [Lactobacillus gasseri ATCC 33323]
Length = 654
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 211/657 (32%), Positives = 342/657 (52%), Gaps = 35/657 (5%)
Query: 2 AKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGG 61
+K+ ++A++++A +GGK+NI L HC TRLR +KD K + L K D G
Sbjct: 3 SKENKKIAEEVIAAIGGKENIVSLAHCATRLRIVVKDRKKVNEKALDKIDKAKGYFFTAG 62
Query: 62 QYQVVIGNH-VPDVYETVLKVAGISGEGSVDADDDAV-EGNLFDRFIALVSGLFQPMLGT 119
QYQ++ G V DVYE V K G+S D +D A + F R I + + +F P++
Sbjct: 63 QYQIIFGTGLVNDVYEAV-KEEGVSTTSKDDLNDVAAKQSGWFQRSIRMFADVFVPIIPA 121
Query: 120 LSAAGMIKGVVAIMAALGVAKTDGA---------YVVLNAAGDGLFQFLPLILAITAAKR 170
L A G+ G+ ++ + K G N F FLP+++ +A +
Sbjct: 122 LVATGLFMGLQGLLTQPALLKMMGMSAKSIPVQFTTYFNILTGTAFSFLPVLICWSAFRV 181
Query: 171 FKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
F + + +G LV P + +++ + +P+ FFG P + Y
Sbjct: 182 FGGSPILGILLGLMLVNPALPSAWDVAQGKV---------APLM--FFGF---IPVAGYQ 227
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLV 290
++VLP + GAK EK K + + + + PF TLL+ L L +GP+ +
Sbjct: 228 ASVLPAFILGFIGAKTEKWIHKHVISSLDLIVTPFATLLVGSILGLLCVGPIFRIVEQGI 287
Query: 291 GALFTGIYDFSPVLYGIVLGAAWQVLVMFGLH--WGLVPLAILELQKGPGVILVASIAIC 348
I L G++ GA Q++V+ GLH LV + +L V + S AI
Sbjct: 288 LHAAEWIVQLPFGLGGLIWGAVCQMIVVTGLHHALNLVEIQLLANTHWNPVNPIGSAAI- 346
Query: 349 FAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALT 408
AQAGA L + +R K++Q++ P+ ISAL G+TEPAIYG+ + PF+ CI G +
Sbjct: 347 AAQAGAALAVALRIHSNKMKQIAYPSTISALLGITEPAIYGVNIKYIKPFLFGCIGGGIG 406
Query: 409 GAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNL 468
G + ++K GM + IP + N ++ L+ +V F + FGLT + +
Sbjct: 407 GFLSSILNLKAT---GMSITVIPGILLFLNQQLPLYILVCVVG-FGVAFGLTYVYYGKHA 462
Query: 469 FGGP--SEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVA 526
F S+K+ E + ++ + ++++V+ +P++G++ AL D FASG MGKG+A
Sbjct: 463 FDSNKNSKKEDIEKKQNTFKQEPSHVSDEVIDAPVSGKIEALNLVSDKAFASGMMGKGIA 522
Query: 527 IEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGS 586
IEPS +V+P +G I + +PT HA G+ +DDGAE+LIH+G+DTV L GKGF V QG
Sbjct: 523 IEPSSNNIVSPVNGTITVAYPTGHAYGIKSDDGAEILIHLGIDTVNLKGKGFNTVVKQGQ 582
Query: 587 KVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
K+ KG+LL ++D I + GY +++TN+ +Y +++ +A G +Q +L+ L +
Sbjct: 583 KINKGELLGTYDYQEIGKEGYDNIVIVLITNSKDYAEVDPIASGNVQAQQKLIALTE 639
>gi|77976287|ref|ZP_00831789.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific [Yersinia
intermedia ATCC 29909]
Length = 513
Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats.
Identities = 168/490 (34%), Positives = 266/490 (54%), Gaps = 34/490 (6%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MA DY A++I+ ++GG N+ + HC TRLRF LKD D + L + GV+TV++AG
Sbjct: 1 MAIDYVLTAQEIIQYIGGDGNVINVTHCATRLRFILKDNKIVDKERLNRVKGVITVIEAG 60
Query: 61 GQYQVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTL 120
GQ QVVIGNHV D Y+ V+ + I V A + L D ++S +F P L L
Sbjct: 61 GQMQVVIGNHVGDAYKHVISLINIDESTPVVAPKVGIVSRLMD----IISSIFAPFLYPL 116
Query: 121 SAAGMIKGVVAIMAALG-VAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTAL 179
+A G+++G+++ +AA+G + G Y +LN F FLP+++A TAAK+F +N FTA+
Sbjct: 117 AACGILQGIISFLAAIGWMDAASGTYRILNFVSWTGFTFLPVLVAFTAAKKFNVNPFTAV 176
Query: 180 AIGFALVYPNIAASFTAEK-------------------------PLYTLFAGTPIESPIF 214
AL+ P+ TA K + AG P+ SP
Sbjct: 177 ITACALISPDYMNMLTANKITTLNSADPAVQQLMQEALNNPQVAHILNTIAGIPLSSPTL 236
Query: 215 STFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPL 274
FFG+P+ + SY ++V+P+I VWA + +++ F++I+P VV+ P F + I VPL
Sbjct: 237 D-FFGIPVQY--LSYTASVIPIILMVWAMSYVQRFFERILPMVVRNLFTPMFCIAIMVPL 293
Query: 275 AFLVIGPVMSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ 334
LV GPV + +G ++ +Y+ SP + G ++GA WQ LV G+HWG+ P+ +
Sbjct: 294 TLLVFGPVGNLIGGAIGGVYNTLYNLSPAVAGFMVGAFWQPLVTLGVHWGITPVTVGNYA 353
Query: 335 K-GPGVILVASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLP 393
G + FA AG + + ++T+ +++ +S+ A I+ALFG+TEPAIYG+ L
Sbjct: 354 TLGYDTFTGLQASAVFAMAGTMFGVYLKTRNSEMKGISLSAGITALFGITEPAIYGVALR 413
Query: 394 MRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANF 453
++ PF+ +C +G + GA + G+ +P F + + + FL++I F
Sbjct: 414 LKKPFLCSCAAGGIGGAIAGASNAVSWSYCLPGIAVLPVFFKEGHMAQFLGFLLSITVAF 473
Query: 454 VLGFGLTQLI 463
VLG T L+
Sbjct: 474 VLGTLFTWLV 483
>gi|81429404|ref|YP_396405.1| Sucrose-specific phosphotransferase system, enzyme IIBCA
[Lactobacillus sakei subsp. sakei 23K]
gi|78611047|emb|CAI56100.1| Sucrose-specific phosphotransferase system, enzyme IIBCA
[Lactobacillus sakei subsp. sakei 23K]
Length = 646
Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats.
Identities = 205/650 (31%), Positives = 318/650 (48%), Gaps = 52/650 (8%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
++ E+AK I A GKDN+ HC TRLR +KD D L + A GQY
Sbjct: 2 NHKEVAKRI-AQAIGKDNVVAAAHCATRLRLVVKDVKVIDQAALDNDPDLKGTFNANGQY 60
Query: 64 QVVIG-NHVPDVYETVLKVAGISGEGSVDADDDAVEG--NLFDRFIALVSGLFQPMLGTL 120
Q+++G V VY+ +K+ I + + A + N+ +FI ++S +F P++ L
Sbjct: 61 QIIVGPGDVNTVYDEFIKIVNIKEASKEELKNIAADNKDNIIMKFIKVLSDIFVPLIPAL 120
Query: 121 SAAGMIKGVVAIMAALGV----------AKTDGAYVVLNAAGDGLFQFLPLILAITAAKR 170
+A G++ + ++ G+ + G ++N F FLP+++A +A KR
Sbjct: 121 TAGGLLMAINNVLTGQGLFGAQSIVQMFPQWKGFAEIVNMMSSAPFTFLPILIAFSATKR 180
Query: 171 FKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
F N + A G LV PN+ + + + T + FGL I + Y
Sbjct: 181 FGGNPYLGAAAGMMLVMPNLVNGYGVAESIAT-------GHMTYWHVFGLNI--AQAGYQ 231
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLV 290
V+PVI + A +EK F K + D V P +++IT L F ++GP + S+ V
Sbjct: 232 GQVIPVIGVAFILANLEKFFHKHLNDAVDFTFTPMLSIIITGFLTFTLVGPALRIVSNGV 291
Query: 291 GALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGL-----VPLAILELQKGPGVILVASI 345
Y + + G + +V+ GLH LA + G + VA++
Sbjct: 292 TDSLVWAYQTLGAVGMGIFGLGYSAIVLTGLHQSFPAIETTLLADIAKTGGSFIFPVAAM 351
Query: 346 AICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISG 405
A AQ A + TK ++ + L+ A ISA+ G+TEPA++G+ L ++ PF + I+
Sbjct: 352 A-NIAQGAATFAVFFVTKNKQQKSLTTSAGISAMLGITEPALFGVNLKLKFPFFIGLIAS 410
Query: 406 ALTGAYLAFFDVKMQVMGGMGLF--------AIPSFIEASNSMTLIHFLIAIVANFVLGF 457
++ + V MG G+ +IPSF+ + +I F+IA V ++ G
Sbjct: 411 GISSFIIGLLHVLSVSMGPAGIIGFIAIAPKSIPSFMMGA----IISFVIAFVGTYLYGK 466
Query: 458 GLTQLIKIPNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFA 517
+ + + P+ + E L EK +++P+ G +V L PD VFA
Sbjct: 467 KAMKTTEEEIINEAPATPEVVERLQDEK-----------ISAPVTGRIVDLASVPDPVFA 515
Query: 518 SGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKG 577
S AMGKG+AI P+ +V+AP GVI + T HA G+ +DDGAE+LIH+G+DTV L+G G
Sbjct: 516 SEAMGKGIAIMPTSQDVLAPVTGVITIAANTGHAYGIKSDDGAEVLIHIGLDTVNLNGIG 575
Query: 578 FTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVL 627
F V QG V +G LL FDID IK+AG T IVTNTA Y Q++ L
Sbjct: 576 FEKIVQQGQHVSEGDLLGHFDIDKIKQAGLTPLTMTIVTNTAGYAQVDPL 625
>gi|28377125|ref|NP_784017.1| sucrose PTS, EIIBCA [Lactobacillus plantarum WCFS1]
gi|28269956|emb|CAD62855.1| sucrose PTS, EIIBCA [Lactobacillus plantarum WCFS1]
Length = 651
Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats.
Identities = 212/652 (32%), Positives = 333/652 (51%), Gaps = 38/652 (5%)
Query: 11 DIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIG-N 69
D V + GK+NI HC TRLR +KDESK D L V + GQYQ++IG
Sbjct: 8 DRVLNAIGKNNIQAAAHCATRLRLVIKDESKIDQQALDDDADVKGTFETNGQYQIIIGPG 67
Query: 70 HVPDVYETVLKVAGISGEGSVDADDDAVEG---NLFDRFIALVSGLFQPMLGTLSAAGMI 126
V VY+ ++ G+ D A G N F+ ++S +F P++ L A G++
Sbjct: 68 DVDKVYDALIAKTGLKEATPDDIKAVAAAGQKKNPLMDFLKVLSDIFIPIVPALVAGGLL 127
Query: 127 KGVVAIMAA--LGVAKT--------DGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQF 176
+ ++ A L +AK+ G ++NA F FLP++L +A KRF N +
Sbjct: 128 MALNNVLTAEHLFMAKSVVEVYPGLKGIAEMINAMASAPFTFLPILLGFSATKRFGGNPY 187
Query: 177 TALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPV 236
+G +V P++ ++ T+ AG ++ FGL + + Y VLPV
Sbjct: 188 LGATMGMIMVLPSLVNGYSVAT---TMAAG----KMVYWNVFGLHV--AQAGYQGQVLPV 238
Query: 237 IAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTG 296
+A + A +EK F K I P F ++IT L F ++GPV+ SD + G
Sbjct: 239 LAVAYILATLEKFFHKHIKGAFDFTFTPMFAIVITGFLTFTIVGPVLRTVSDALTNGLVG 298
Query: 297 IYDFSPVLYGIVLGAAWQVLVMFGLHWGLVP-----LAILELQKGPGVILVASIAICFAQ 351
+Y+ + + + G + +V+ GLH LA + G + VAS+A Q
Sbjct: 299 LYNTTGWIGMGIFGLLYSAIVITGLHQTFPAIETQLLANVAKTGGSFIFPVASMA-NIGQ 357
Query: 352 AGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAY 411
A L I TK +K + L+ A +SAL G+TEPAI+G+ L M+ PF+ I+ + A+
Sbjct: 358 GAATLAIFFATKSQKQKALTSSAGVSALLGITEPAIFGVNLKMKFPFVFAAIASGIASAF 417
Query: 412 LAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGG 471
L F V MG + S S ++ F+++ V +FV+ F + I G
Sbjct: 418 LGLFHVLSVAMGPASVIGFISIA----SKSIPAFMLSAVISFVVAF-IPTFIYAKRTLG- 471
Query: 472 PSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSV 531
++D +S ++ + ++++++P+ G +L+ D VF++ MGKG AI PS
Sbjct: 472 -DDRDQVKSPAPTSTVIN--VNDEIISAPVTGTSESLKQVNDQVFSAEIMGKGAAIVPSA 528
Query: 532 GEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKG 591
+VVAPADGVI + + ++HA G+ T GAE+LIH+G+DTV L+G+ FT +V +G V +G
Sbjct: 529 DQVVAPADGVITVTYDSHHAYGIKTTAGAEILIHLGLDTVNLNGEHFTTNVQKGDTVHQG 588
Query: 592 QLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
LL +FD+ +K A Y T ++VTNTANY +E L +Q G QL+ L +
Sbjct: 589 DLLGTFDVAALKAANYDPTVMLVVTNTANYANVERLKVTNVQAGEQLVALTE 640
>gi|94989425|ref|YP_597526.1| PTS system, trehalose-specific IIA component [Streptococcus
pyogenes MGAS9429]
gi|94993314|ref|YP_601413.1| PTS system, trehalose-specific IIBC component / PTS system,
trehalose-specific IIA component [Streptococcus pyogenes
MGAS2096]
gi|94542933|gb|ABF32982.1| PTS system, trehalose-specific IIBC component [Streptococcus
pyogenes MGAS9429]
gi|94546822|gb|ABF36869.1| PTS system, trehalose-specific IIBC component / PTS system,
trehalose-specific IIA component [Streptococcus pyogenes
MGAS2096]
Length = 674
Score = 275 bits (702), Expect = 9e-72, Method: Composition-based stats.
Identities = 214/664 (32%), Positives = 323/664 (48%), Gaps = 64/664 (9%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AK ++ +GGK+NI + HC TR+RF L D +KA+ + K V GQ+Q
Sbjct: 4 FEQDAKSLLTAIGGKENIKAVTHCATRMRFVLNDNNKANVKEIEKISVVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N R + +++ +F P++ +
Sbjct: 64 VIIGNDVPVFYNDFTAVSGIEGVSKEAAKSAAKSNQNALQRVMTMLAEIFTPIIPAIIVG 123
Query: 124 GMIKGVVAIMAALGV----AKTDGAYVVLNAAGD-------------------------G 154
G+I G I+ ++ + + +V +AAGD
Sbjct: 124 GLILGFRNILESVPFEFLGQQVEKGKLVFDAAGDPVWNTIVRVSPFWSGVNHFLWLPGEA 183
Query: 155 LFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIF 214
+F FLP+ + + ++ Q + +G LV P + ++ AGTP
Sbjct: 184 IFHFLPVGITWSVTRKMGTTQILGIVLGICLVSPQLLNAYAV--------AGTPAAEIAK 235
Query: 215 S-----TFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLL 269
+ FF + I Y + V+P + A + A +E ++K IP+VV + VPF +L+
Sbjct: 236 NWVWDFGFFTINRI----GYQAQVIPALLAGLSLAYLEIFWRKRIPEVVSMIFVPFLSLI 291
Query: 270 ITVPLAFLVIGPVMSW--ASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GL 325
+ LA V+GP+ W + + G+ L+G + GA + LV+ GLH
Sbjct: 292 PALILAHTVLGPI-GWIIGKGISFVVLAGLTGPVKWLFGAIFGALYAPLVITGLHHMTNA 350
Query: 326 VPLAILELQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVT 383
+ ++ L IA+ AQ A+ +M EE+ ++S+PA ISA GVT
Sbjct: 351 IDTQLIADTATRTTGLWPMIALSNIAQGSAVFAYYLMNRHEEREAEISLPAAISAYLGVT 410
Query: 384 EPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLI 443
EPA++G+ + PF+ I + G FDV+ +G GL P F+ A N +I
Sbjct: 411 EPALFGVNVKYVYPFVAGMIGSGIAGLLSTTFDVQANSIGVGGL---PGFM-AINVKYMI 466
Query: 444 HFLIAIVANFVLGFGLTQLIKIPNLFGGPS-EKDAAESLDSEKERVSAGI-----TEQVV 497
F I + V+ LT + ++ E AE+ SE +A T +
Sbjct: 467 PFFICMAVAIVVPMFLTFFFRKSHIMTKTEDEAKLAETPVSEAPAATAPHKTMQGTVITL 526
Query: 498 TSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATD 557
TSPL GEV AL + D VFA G MG+GV ++P+ G +VAP D + +LFPT HAIGL T
Sbjct: 527 TSPLTGEVKALSEAVDPVFAQGVMGQGVLLQPTEGVLVAPCDAEVSVLFPTKHAIGLVTA 586
Query: 558 DGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTN 617
+G ELL+H+GMDTV LDG+GF A V QG +VK GQ L+ FDI I EAGY P++VTN
Sbjct: 587 EGLELLMHIGMDTVNLDGQGFEALVKQGDQVKAGQTLIQFDIAAISEAGYATEMPLVVTN 646
Query: 618 TANY 621
+
Sbjct: 647 QDTF 650
>gi|148989381|ref|ZP_01820749.1| PTS system IIABC component [Streptococcus pneumoniae SP6-BS73]
gi|147925131|gb|EDK76211.1| PTS system IIABC component [Streptococcus pneumoniae SP6-BS73]
Length = 628
Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 203/641 (31%), Positives = 328/641 (51%), Gaps = 23/641 (3%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVV 66
E+AK ++ +GG++N+ + HC TRLR +KDE K + + + + V GQYQ++
Sbjct: 5 EIAKKVIDALGGRENVNSVAHCATRLRVMVKDEEKINKEVIENLEKVQGAFFNSGQYQII 64
Query: 67 IGN-HVPDVYETVLKVAGISGEGSVDADDDAV-EGNLFDRFIALVSGLFQPMLGTLSAAG 124
G V +Y+ V+ V G+ D +A +GN F R I +F P++ + A G
Sbjct: 65 FGTGTVNKMYDEVV-VLGLPTSSKDDMKAEAARQGNWFQRAIRTFGDVFVPIIPVIVATG 123
Query: 125 MIKGVVAIMAALGVAKTDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGFA 184
+ GV + AL + D F LP ++ + + F N + +G
Sbjct: 124 LFMGVRGLFNALEMPLPGDFATYTQILTDTAFIILPGLVVWSTFRVFGGNPAVGIVLGMM 183
Query: 185 LVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAGA 244
LV ++ ++ + G + + FFG P +VLP GA
Sbjct: 184 LVSGSLPNAWAVAQ-------GGEVTA---MNFFGF---IPVVGLQGSVLPAFIIGVVGA 230
Query: 245 KIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFT-GIYDFSPV 303
K EK +K++PDV+ + + PF TLL+ L S + T I
Sbjct: 231 KFEKAVRKVVPDVIDLLVTPFVTLLVMSILGLFCHWNQFSTLLKTTSFIATKAILSMPFG 290
Query: 304 LYGIVLGAAWQVLVMFGLH--WGLVPLAILELQKGPGVILVASIAICFAQAGALLNIMMR 361
L G ++G Q++V+ G+H + L+ + +L + + A+ AQ A + + ++
Sbjct: 291 LGGFLIGGVHQLIVVSGVHHIFNLLEVQLLAADHANPFNAIITAAMT-AQGAATVAVGVK 349
Query: 362 TKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
TK K++ L+ PA +SA G+TEPAI+G+ L R PF ++ I+GA+ G + +
Sbjct: 350 TKNPKLKTLAFPAALSAFLGITEPAIFGVNLRFRKPFFLSLIAGAIGGGLASILGLAGT- 408
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
G G+ IP + + L +L+ + +F LGF LT + + + AE
Sbjct: 409 --GNGITIIPGTMLYVGNGQLPQYLLMVAVSFALGFALTYMFGYEDEVDATAAAKQAEVA 466
Query: 482 DSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGV 541
+ ++E A + + + +P+ G+VVAL D D VF+SGAMG+G+A++PS G V A AD
Sbjct: 467 EEKEEVAPAALQNETLVTPIVGDVVALADVNDPVFSSGAMGQGIAVKPSQGVVYALADAE 526
Query: 542 IRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDT 601
+ + FPT HA GL T +GAE+LIHVG+DTV+++G GF A V QG+KVK G +L +FD +
Sbjct: 527 VSIAFPTGHAFGLKTRNGAEVLIHVGIDTVSMNGDGFEAKVAQGNKVKAGDVLGTFDSNK 586
Query: 602 IKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
I AG TT +IVTNTA+Y + +A G + G+ ++E+K
Sbjct: 587 IAAAGLDDTTMVIVTNTADYASVAPVATGSVSKGDAVIEVK 627
>gi|139473184|ref|YP_001127899.1| putative sucrose-specific phosphotransferase system (PTS), IIABC
component [Streptococcus pyogenes str. Manfredo]
gi|134271430|emb|CAM29650.1| putative sucrose-specific phosphotransferase system (PTS), IIABC
component [Streptococcus pyogenes str. Manfredo]
Length = 627
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 206/653 (31%), Positives = 323/653 (49%), Gaps = 41/653 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D ++A +++ +GG++N+ + HC TRLR + DE K D + D V GQY
Sbjct: 2 DNRQIATEVIEALGGRENVRSVAHCATRLRVMVHDEGKIDKEKAEAIDKVKGAFFNSGQY 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
Q++ G V ++Y V+ + + S + +GN+F R I +F P++ + A
Sbjct: 62 QMIFGTGTVNNIYGEVVALGLPTSSTSEQKAEAGKQGNIFQRAIRTFGDVFVPIIPAIVA 121
Query: 123 AGMIKGV------VAIMAALGVAKTDGAYVVLNAA-GDGLFQFLPLILAITAAKRFKMNQ 175
G+ GV AIM GV + +++ D F +LP ++A +A + F N
Sbjct: 122 TGLFMGVRGLVTQPAIMDLFGVHEYGENFLMYTRILTDTAFVYLPALVAWSAFRVFGGNP 181
Query: 176 FTALAIGFALV---YPN--IAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+ +G LV PN + AS KPL TFFG P Y
Sbjct: 182 IIGIVLGLMLVSNELPNAWVVASGGDVKPL---------------TFFGF---VPVVGYQ 223
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLV 290
TVLP GAK+EK K +P+ + + + PF T I L VIGPV +LV
Sbjct: 224 GTVLPAFFVGLVGAKLEKWLHKKVPEALDLLVTPFLTFAIMSILGLFVIGPVFHSLENLV 283
Query: 291 GALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIAICF 349
A + + G+++G Q++V+ G+H L A L G A
Sbjct: 284 LAGTQAVLHLPFGIAGLIVGGIQQLIVVTGIHHIFNFLEAQLIANTGKDPFNAYLTAATV 343
Query: 350 AQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTG 409
AQAGA L + ++TK K++ L+ P+ +SAL G+TEPAI+G+ L F+ I GAL G
Sbjct: 344 AQAGATLAVAVKTKSPKLKGLAFPSTLSALLGITEPAIFGVNLRYPKVFVSGLIGGALGG 403
Query: 410 AYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLF 469
F + G G+ +P + N L+ +L+ ++ + F + +
Sbjct: 404 WVAGLFGIAGT---GFGITVLPGTLLYLNGQ-LLQYLVTMLVGLGVAFAIAYTWGYQD-- 457
Query: 470 GGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEP 529
E +++ ++ + E+ + SPL G VV L D VF+SGAMG+G+AI+P
Sbjct: 458 ---RETLPLPAVEVDQTADQPALAEETLYSPLNGTVVDLAAVSDPVFSSGAMGQGLAIKP 514
Query: 530 SVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVK 589
+ +P DG + ++F T HA + + GAE+L+H+G+DTV++ G GF + V G VK
Sbjct: 515 EDNTLYSPVDGKVEIVFETGHAYAITSSQGAEVLLHIGIDTVSMAGDGFESLVAVGQAVK 574
Query: 590 KGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
KG LL FD I EAG TT +IVTN+A+Y+ +++LA+G I +G+Q+ +K
Sbjct: 575 KGDLLGHFDPSKIAEAGLDDTTMMIVTNSADYQSVDILAQGHILIGDQVALIK 627
>gi|2126626|pir||S68599 phosphotransferase system enzyme II (EC 2.7.1.69), sucrose-specific
- Streptococcus sobrinus (strain 6715)
Length = 632
Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 208/656 (31%), Positives = 325/656 (49%), Gaps = 41/656 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D ++AK+++ +GG+DN+ + HC TRLR + DE+K D + D V GQY
Sbjct: 2 DNKQIAKEVIEALGGRDNVRSVAHCATRLRVMVVDEAKIDKERAENIDKVKGAFFNSGQY 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
Q++ G V +Y+ V+ + + + A +GN F R +F P++ L A
Sbjct: 62 QIIFGTGTVNKIYDEVVDLGLPTSSTGEQKQEAAAQGNWFQRMSRTFGDVFVPIIPVLVA 121
Query: 123 AGMIKGVVAIMAA------LGVAKTD-GAYVVL--NAAGDGLFQFLPLILAITAAKRFKM 173
G+ G+ ++ G + D A +L D F FLP ++A ++ K F
Sbjct: 122 TGLFMGLRGLLTNDTFLGFFGASSKDINANFILYTQVLTDTAFAFLPALIAWSSFKVFGG 181
Query: 174 NQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTV 233
N + +G +V P + + Y + +G TFFG P Y TV
Sbjct: 182 NPVLGIVLGLMMVNPALPNA-------YAVASGDAKAL----TFFGF---IPVVGYQGTV 227
Query: 234 LPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGAL 293
LP GA++E K +P+ + + I PF T L+ L IGPV +V A
Sbjct: 228 LPAFFVGMIGARLENWLHKRVPEALDLLITPFLTFLVMSILGLFAIGPVFHSVETVVLAA 287
Query: 294 FTGIYDFSPVLYGIVLGAAWQVLVMFGLH--WGLVPLAIL-ELQKGPGVILVASIAICFA 350
I + GI++G QV+V+ G+H + + +L E + P L++ A
Sbjct: 288 TEWILALPFGIAGIIIGGLQQVIVVTGVHHIFNFLETQLLAETKANPFNPLLS--AATAG 345
Query: 351 QAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGA 410
Q GA+L + ++TK K++ L+ P+ +SA G+TEPAI+G+ L PF+M + G+ G
Sbjct: 346 QVGAVLAVAVKTKSAKLKALAYPSALSAALGITEPAIFGVNLRYGKPFVMGLVGGSAGGF 405
Query: 411 YLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFG 470
A +K GM + +P + NS + ++++I + F LT +
Sbjct: 406 IAALVGLKAT---GMSVTVLPGLLLFLNSQ-MPMYIVSITVACAIAFALTYYFGYAD--- 458
Query: 471 GPSEKDAAESLDSEKERVSAGITE---QVVTSPLAGEVVALEDTPDAVFASGAMGKGVAI 527
E+D + TE +V+ SPL GE V L D VF+S AMGKG+A+
Sbjct: 459 --KEEDVSAKKPEAPAAAPVAETETKSEVIASPLDGEAVELSKVNDPVFSSEAMGKGIAV 516
Query: 528 EPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSK 587
+PS V +P +G +++ F T HA GL +D+GAE+LIHVG+DTV+++G GF V
Sbjct: 517 KPSGNTVYSPVNGTVQIAFETGHAYGLKSDNGAEVLIHVGIDTVSMNGTGFDQKVAANQT 576
Query: 588 VKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
VK G +L +FD I EAG TT +I+TNTA+Y +++ LA G++ G LLEL K
Sbjct: 577 VKVGDVLGTFDSAKIAEAGLDDTTMVIITNTADYSEVKPLAAGQLAHGADLLELNK 632
>gi|25011774|ref|NP_736169.1| hypothetical protein gbs1734 [Streptococcus agalactiae NEM316]
gi|77414855|ref|ZP_00790968.1| PTS system, IIABC components [Streptococcus agalactiae 515]
gi|24413314|emb|CAD47393.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159092|gb|EAO70290.1| PTS system, IIABC components [Streptococcus agalactiae 515]
Length = 639
Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 217/667 (32%), Positives = 341/667 (51%), Gaps = 62/667 (9%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TE+AK ++ +GG N+ + HC TRLR +KDE+ D + + + V GQYQ+
Sbjct: 5 TEIAKQVINAIGGASNVRSVAHCATRLRVMVKDETVIDKNTVENIEKVQGAFFNSGQYQI 64
Query: 66 VIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+ G V +Y+ V+ + S + A +GN F R I +F P+L + A G
Sbjct: 65 IFGTGTVNKIYDEVVAQGLPTSSTSDQKAEAAKQGNAFQRAIRTFGDVFVPLLPAIVATG 124
Query: 125 MIKGVVA------IMAALGVAK----TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMN 174
+ G+ ++A G + Y D F F P +++ +A + F N
Sbjct: 125 LFMGIRGAINNDTVLALFGTTSKAFSSSNFYTYTVVLTDTAFAFFPALISWSAFRVFGGN 184
Query: 175 QFTALAIGFALV---YPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLS 231
L +G +V PN A + + PI+ FFG P Y +
Sbjct: 185 PVIGLVLGLMMVNSALPNAWAVASGD--------AHPIK------FFGF---IPVVGYQN 227
Query: 232 TVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVG 291
+VLP GAK+EK K IPDV+ + +VPF T + LA VIGP+ + V
Sbjct: 228 SVLPAFFVGLLGAKLEKWLHKKIPDVLDLLLVPFLTFTVMSILALFVIGPIFHSVENYVL 287
Query: 292 ALFTGIYDFSPVLYGIVLGAAWQVLVMFGLH--WGLVPLAILELQ-KGP-GVILVASIAI 347
A + + L G++LG Q++V+ G+H + L+ ++ K P I+ A++
Sbjct: 288 AGTKFVLNLPLGLSGLILGGVHQIIVVTGVHHIFNLLEAQLIAADGKDPFNAIITAAMT- 346
Query: 348 CFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQAGA L + ++TK +K++ L+ PA +SA G+TEPAI+G+ L PFIM I+GA
Sbjct: 347 --AQAGATLAVGVKTKNKKLKALAFPAALSAGLGITEPAIFGVNLRFGKPFIMGLIAGA- 403
Query: 408 TGAYLAFFDVKMQVMG-GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIP 466
G +LA +++ G G G+ IP + N ++ +LI ++ L F LT +
Sbjct: 404 AGGWLASI---LKLAGTGFGITIIPGTLLYLNGQ-IVKYLIMVIGTTALAFVLTYMF--- 456
Query: 467 NLFGGPSEKD----------AAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVF 516
G +KD E+ D+ ++ + + + SPL G+V+AL+ D VF
Sbjct: 457 ----GYEDKDEKVVAEVSPLVEETDDNPTITQTSQLRAETIVSPLDGQVIALDTVSDPVF 512
Query: 517 ASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGK 576
+SG MG G+AI+PS + +P DG ++++F T HA G+ +D GAE+LIH+G+DTV ++G
Sbjct: 513 SSGIMGDGLAIKPSGNTIYSPVDGFVQIVFETGHAYGIKSDKGAEILIHIGIDTVTMNGT 572
Query: 577 GFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAK-GEIQLG 635
GFT+ V KVKKG +L +FD I EAG T IIVTNTA++ + L K G + G
Sbjct: 573 GFTSKVKADQKVKKGDILGTFDSAKIAEAGLDNTAMIIVTNTADFADVIPLVKEGVVTTG 632
Query: 636 NQLLELK 642
+ ++++K
Sbjct: 633 DMIIDVK 639
>gi|116492316|ref|YP_804051.1| sucrose PTS, EIIBCA [Pediococcus pentosaceus ATCC 25745]
gi|116102466|gb|ABJ67609.1| sucrose PTS, EIIBCA [Pediococcus pentosaceus ATCC 25745]
Length = 651
Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats.
Identities = 213/650 (32%), Positives = 331/650 (50%), Gaps = 38/650 (5%)
Query: 11 DIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIG-N 69
D V + GK+NI HC TRLR +KDESK D L V + GQYQ++IG
Sbjct: 8 DRVLNAIGKNNIQAAAHCATRLRLVIKDESKIDQQALDDDADVKGTFETNGQYQIIIGPG 67
Query: 70 HVPDVYETVLKVAGISGEGSVDADDDAVEG---NLFDRFIALVSGLFQPMLGTLSAAGMI 126
V VY+ ++ G+ D A G N F+ ++S +F P++ L A G++
Sbjct: 68 DVDKVYDALIAKTGLKEVTPDDIKAVAAAGQKKNPLMDFLKVLSDIFIPIVPALVAGGLL 127
Query: 127 KGVVAIMAA--LGVAKT--------DGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQF 176
+ ++ A L +AK+ G ++NA F FLP++L +A KRF N +
Sbjct: 128 MALNNVLTAEHLFMAKSVVEVYPGLKGIAEMINAMASAPFTFLPILLGFSATKRFGGNPY 187
Query: 177 TALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPV 236
+G +V P++ ++ T+ AG ++ FGL + + Y VLPV
Sbjct: 188 LGATMGMIMVLPSLVNGYSVAT---TMAAG----KMVYWNVFGLHV--AQAGYQGQVLPV 238
Query: 237 IAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTG 296
+ + A +EK F K I P F ++IT L F ++GPV+ SD + G
Sbjct: 239 LGVAFILATLEKFFHKHIKGAFDFTFTPMFAIVITGFLTFTIVGPVLRTVSDALTNGLVG 298
Query: 297 IYDFSPVLYGIVLGAAWQVLVMFGLHWGLVP-----LAILELQKGPGVILVASIAICFAQ 351
+Y+ + + + G + +V+ GLH LA + G + VAS+A Q
Sbjct: 299 LYNSTGWIGMGIFGLLYSAIVITGLHQTFPAIETQLLANVAKTGGSFIFPVASMA-NIGQ 357
Query: 352 AGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAY 411
A L I TK +K + L+ A +SAL G+TEPAI+G+ L M+ PF+ I+ + A+
Sbjct: 358 GAATLAIFFATKSQKQKALTSSAGVSALLGITEPAIFGVNLKMKFPFVFAAIASGIASAF 417
Query: 412 LAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGG 471
L F V MG + S S ++ F+++ V +FV+ F + I G
Sbjct: 418 LGLFHVLSVAMGPASVIGFISIA----SKSIPAFMLSAVISFVVAF-IPTFIYAKRTLG- 471
Query: 472 PSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSV 531
++D +S ++ + ++++++P+ G +L+ D VF++ MGKG AI PS
Sbjct: 472 -DDRDQVKSPAPTSTVIN--VNDEIISAPVTGASKSLKQVNDQVFSAEIMGKGAAIVPSA 528
Query: 532 GEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKG 591
+VVAPADGVI + + ++HA G+ T GAE+LIH+G+DTV L+G+ FT +V +G V +G
Sbjct: 529 DQVVAPADGVITVTYDSHHAYGIKTTAGAEILIHLGLDTVNLNGEHFTTNVQKGDTVHQG 588
Query: 592 QLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
LL +FDI +K A Y T +IVTNTANY +E L +Q G QL+ L
Sbjct: 589 DLLGTFDIAALKAANYDPTVMLIVTNTANYANVERLKVTNVQAGEQLVAL 638
>gi|1172744|sp|P43470|PTS3B_PEDPE PTS system sucrose-specific EIIBCA component (EIIBCA-Scr) (EII-Scr)
[Includes: Sucrose-specific phosphotransferase enzyme
IIB component (PTS system sucrose-specific EIIB
component); Sucrose permease IIC component (PTS system
sucrose-specific EIIC component); Sucrose-specific
phosphotransferase enzyme IIA component (PTS system
sucrose-specific EIIA component)]
gi|475112|gb|AAA25567.1| enzyme IIabc
gi|475968|emb|CAA83668.1| enzyme IIabc [Pediococcus pentosaceus]
Length = 651
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 213/650 (32%), Positives = 331/650 (50%), Gaps = 38/650 (5%)
Query: 11 DIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIG-N 69
D V + GK+NI HC TRLR +KDESK D L V + GQYQ++IG
Sbjct: 8 DRVLNAIGKNNIQAAAHCATRLRLVIKDESKIDQQALDDDADVKGTFETNGQYQIIIGPG 67
Query: 70 HVPDVYETVLKVAGISGEGSVDADDDAVEG---NLFDRFIALVSGLFQPMLGTLSAAGMI 126
V VY+ ++ G+ D A G N F+ ++S +F P++ L A G++
Sbjct: 68 DVDKVYDALIVKTGLKEVTPDDIKAVAAAGQNKNPLMDFLKVLSDIFIPIVPALVAGGLL 127
Query: 127 KGVVAIMAA--LGVAKT--------DGAYVVLNAAGDGLFQFLPLILAITAAKRFKMNQF 176
+ ++ A L +AK+ G ++NA F FLP++L +A KRF N +
Sbjct: 128 MALNNVLTAEHLFMAKSVVEVYPGLKGIAEMINAMASAPFTFLPILLGFSATKRFGGNPY 187
Query: 177 TALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPV 236
+G +V P++ ++ T+ AG ++ FGL + + Y VLPV
Sbjct: 188 LGATMGMIMVLPSLVNGYSVAT---TMAAG----KMVYWNVFGLHV--AQAGYQGQVLPV 238
Query: 237 IAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTG 296
+ + A +EK F K I P F ++IT L F ++GPV+ SD + G
Sbjct: 239 LGVAFILATLEKFFHKHIKGAFDFTFTPMFAIVITGFLTFTIVGPVLRTVSDALTNGLVG 298
Query: 297 IYDFSPVLYGIVLGAAWQVLVMFGLHWGLVP-----LAILELQKGPGVILVASIAICFAQ 351
+Y+ + + + G + +V+ GLH LA + G + VAS+A Q
Sbjct: 299 LYNSTGWIGMGIFGLLYSAIVITGLHQTFPAIETQLLANVAKTGGSFIFPVASMA-NIGQ 357
Query: 352 AGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAY 411
A L I TK +K + L+ A +SAL G+TEPAI+G+ L M+ PF+ I+ + A+
Sbjct: 358 GAATLAIFFATKSQKQKALTSSAGVSALLGITEPAIFGVNLKMKFPFVFAAIASGIASAF 417
Query: 412 LAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGG 471
L F V MG + S S ++ F+++ V +FV+ F + I G
Sbjct: 418 LGLFHVLSVAMGPASVIGFISIA----SKSIPAFMLSAVISFVVAF-IPTFIYAKRTLG- 471
Query: 472 PSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSV 531
++D +S ++ + ++++++P+ G +L+ D VF++ MGKG AI PS
Sbjct: 472 -DDRDQVKSPAPTSTVIN--VNDEIISAPVTGASESLKQVNDQVFSAEIMGKGAAIVPSS 528
Query: 532 GEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKG 591
+VVAPADGVI + + ++HA G+ T GAE+LIH+G+DTV L+G+ FT +V +G V +G
Sbjct: 529 DQVVAPADGVITVTYDSHHAYGIKTTAGAEILIHLGLDTVNLNGEHFTTNVQKGDTVHQG 588
Query: 592 QLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
LL +FDI +K A Y T +IVTNTANY +E L +Q G QL+ L
Sbjct: 589 DLLGTFDIAALKAANYDPTVMLIVTNTANYANVERLKVTNVQAGEQLVAL 638
>gi|77412406|ref|ZP_00788714.1| PTS system, IIABC components [Streptococcus agalactiae CJB111]
gi|77161541|gb|EAO72544.1| PTS system, IIABC components [Streptococcus agalactiae CJB111]
Length = 639
Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats.
Identities = 217/667 (32%), Positives = 340/667 (50%), Gaps = 62/667 (9%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TE+AK ++ +GG N+ + HC TRLR +KDE+ D + + + V GQYQ+
Sbjct: 5 TEIAKQVINAIGGASNVRSVAHCATRLRVMVKDETVIDKNTVENIEKVQGAFFNSGQYQI 64
Query: 66 VIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+ G V +Y+ V+ + S + A +GN F R I +F P+L + A G
Sbjct: 65 IFGTGTVNKIYDEVVAQGLPTSSTSDQKAEAAKQGNAFQRAIRTFGDVFVPLLPAIVATG 124
Query: 125 MIKGVVA------IMAALGVAK----TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMN 174
+ G+ ++A G + Y D F F P +++ +A + F N
Sbjct: 125 LFMGIRGAINNDTVLALFGTTSKAFSSSNFYTYTVVLTDTAFAFFPALISWSAFRVFGGN 184
Query: 175 QFTALAIGFALV---YPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLS 231
L +G +V PN A + + PI+ FFG P Y +
Sbjct: 185 PVIGLVLGLMMVNSALPNAWAVASGD--------AHPIK------FFGF---IPVVGYQN 227
Query: 232 TVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVG 291
+VLP GAK+EK K IPDV+ + +VPF T + LA VIGP+ + V
Sbjct: 228 SVLPAFFVGLLGAKLEKWLHKKIPDVLDLLLVPFLTFTVMSILALFVIGPIFHSVENYVL 287
Query: 292 ALFTGIYDFSPVLYGIVLGAAWQVLVMFGLH--WGLVPLAILELQ-KGP-GVILVASIAI 347
A + + L G++LG Q++V+ G+H + L+ ++ K P I+ A++
Sbjct: 288 AGTKFVLNLPLGLSGLILGGVHQIIVVTGVHHIFNLLEAQLIAADGKDPFNAIITAAMT- 346
Query: 348 CFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQAGA L + ++TK +K++ L+ PA +SA G+TEPAI+G+ L PFIM I+GA
Sbjct: 347 --AQAGATLAVGVKTKNKKLKALAFPAALSAGLGITEPAIFGVNLRFGKPFIMGLIAGA- 403
Query: 408 TGAYLAFFDVKMQVMG-GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIP 466
G +LA +++ G G G+ IP + N ++ +LI ++ L F LT +
Sbjct: 404 AGGWLASI---LKLAGTGFGITIIPGTLLYLNGQ-IVKYLIMVIGTTALAFVLTYMF--- 456
Query: 467 NLFGGPSEKD----------AAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVF 516
G +KD E+ D+ ++ + + + SPL G+V+AL+ D VF
Sbjct: 457 ----GYEDKDEKVVAEVSPLVEETDDNPTITQTSQLRAETIVSPLDGQVIALDTVSDPVF 512
Query: 517 ASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGK 576
+SG MG G+AI+PS + +P DG +++ F T HA G+ +D GAE+LIH+G+DTV ++G
Sbjct: 513 SSGIMGDGLAIKPSGNTIYSPVDGFVQIAFETGHAYGIKSDKGAEILIHIGIDTVTMNGT 572
Query: 577 GFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAK-GEIQLG 635
GFT+ V KVKKG +L +FD I EAG T IIVTNTA++ + L K G + G
Sbjct: 573 GFTSKVKADQKVKKGDILGTFDSAKIAEAGLDNTAMIIVTNTADFADVIPLVKEGVVTTG 632
Query: 636 NQLLELK 642
+ ++++K
Sbjct: 633 DMIIDVK 639
>gi|75514215|ref|ZP_00736523.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Escherichia coli 53638]
Length = 451
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 165/464 (35%), Positives = 254/464 (54%), Gaps = 16/464 (3%)
Query: 179 LAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIA 238
+ IG ALV+P I +F + L F G+P+ +Y S+V+P+I
Sbjct: 1 MVIGGALVHPLILTAFENGQKADALGL----------DFLGIPVTL--LNYSSSVIPIIF 48
Query: 239 AVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIY 298
+ W + +E+ +P +K F P L++ P+ FL++GP+ +W S+++ A + +Y
Sbjct: 49 SAWLCSILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISEMIAAGYLWLY 108
Query: 299 DFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQAGALLN 357
P G V+G WQ+ VMFGLHWGLVPL I G ++ + AQ GA L
Sbjct: 109 QAVPAFAGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALG 168
Query: 358 IMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDV 417
+ + ++ + + ++ A ++ LFG+TEPA+YG+ LP + PF++ CISGAL + +
Sbjct: 169 VFLCERDAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQT 228
Query: 418 KMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDA 477
K+ GL +I +F++ S + + A V V+ G + + F + A
Sbjct: 229 KVY---SFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPA 285
Query: 478 AESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAP 537
+ + V + + SP+ GE+V L D FASG +GKG+AI PSVGEV +P
Sbjct: 286 QGAPQEKTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSP 345
Query: 538 ADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSF 597
G I LF T HAIG+ +DDG E+LIHVG+DTV LDGK F+AHV G KV G L+SF
Sbjct: 346 VAGRIASLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISF 405
Query: 598 DIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLEL 641
DI I+EAG+ VTTP++++N+ ++ + +I G LL +
Sbjct: 406 DIPAIREAGFDVTTPVLISNSDDFTDVLPHGTAQISAGEPLLSI 449
>gi|22537830|ref|NP_688681.1| PTS system, IIABC components [Streptococcus agalactiae 2603V/R]
gi|76798711|ref|ZP_00780932.1| PTS system, IIABC components [Streptococcus agalactiae 18RS21]
gi|22534724|gb|AAN00554.1|AE014268_14 PTS system, IIABC components [Streptococcus agalactiae 2603V/R]
gi|76585936|gb|EAO62473.1| PTS system, IIABC components [Streptococcus agalactiae 18RS21]
Length = 639
Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 216/664 (32%), Positives = 338/664 (50%), Gaps = 56/664 (8%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TE+AK ++ +GG N+ + HC TRLR +KDE+ D + + + V GQYQ+
Sbjct: 5 TEIAKQVINAIGGASNVRSVAHCATRLRVMVKDETVIDKNTVENIEKVQGAFFNSGQYQI 64
Query: 66 VIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+ G V +Y+ V+ + S + A +GN F R I +F P+L + A G
Sbjct: 65 IFGTGTVNKIYDEVVAQGLPTSSTSDQKAEAAKQGNAFQRAIRTFGDVFVPLLPAIVATG 124
Query: 125 MIKGVVA------IMAALGVAK----TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMN 174
+ G+ ++A G + Y D F F P +++ +A + F N
Sbjct: 125 LFMGIRGAINNDTVLALFGTTSKAFSSSNFYTYTVVLTDTAFAFFPALISWSAFRVFGGN 184
Query: 175 QFTALAIGFALV---YPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLS 231
L +G +V PN A + + PI+ FFG P Y +
Sbjct: 185 PVIGLVLGLMMVNSALPNAWAVASGD--------AHPIK------FFGF---IPVVGYQN 227
Query: 232 TVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVG 291
+VLP GAK+EK K IPDV+ + +VPF T + LA VIGP+ + V
Sbjct: 228 SVLPAFFVGLLGAKLEKWLHKKIPDVLDLLLVPFLTFTVMSILALFVIGPIFHSVENYVL 287
Query: 292 ALFTGIYDFSPVLYGIVLGAAWQVLVMFGLH--WGLVPLAILELQ-KGP-GVILVASIAI 347
A + + L G++LG Q++V+ G+H + L+ ++ K P I+ A++
Sbjct: 288 AGTKFVLNLPLGLSGLILGGVHQIIVVTGVHHIFNLLEAQLIAADGKDPFNAIITAAMT- 346
Query: 348 CFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQAGA L + ++TK +K++ L+ PA +SA G+TEPAI+G+ L PFIM I+GA
Sbjct: 347 --AQAGATLAVGVKTKNKKLKALAFPAALSAGLGITEPAIFGVNLRFGKPFIMGLIAGA- 403
Query: 408 TGAYLAFFDVKMQVMG-GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIP 466
G +LA +++ G G G+ IP + N ++ +LI ++ L F LT +
Sbjct: 404 AGGWLASI---LKLAGTGFGITIIPGTLLYLNGQ-IVKYLIMVIGTTSLAFVLTYMFG-- 457
Query: 467 NLFGGPSEKDAAE-------SLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASG 519
+ EK AE + D ++ + + + SPL G+V+AL+ D VF+SG
Sbjct: 458 --YEDKDEKAVAEVSPLVEETDDDPTITQTSQLRAETIVSPLDGQVIALDTVSDPVFSSG 515
Query: 520 AMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFT 579
MG G+AI+P + +P DG +++ F T HA G+ +D GAE+LIH+G+DTV ++G GFT
Sbjct: 516 IMGDGLAIKPRGNTIYSPVDGFVQIAFETGHAYGIKSDKGAEILIHIGIDTVTMNGTGFT 575
Query: 580 AHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAK-GEIQLGNQL 638
+ V KVKKG +L +FD I EAG T IIVTNTA++ + L K G + G+ +
Sbjct: 576 SKVKADQKVKKGDILGTFDSAKIAEAGLDNTAMIIVTNTADFADVVPLVKEGVVTTGDMI 635
Query: 639 LELK 642
+++K
Sbjct: 636 IDVK 639
>gi|94991360|ref|YP_599460.1| PTS system, trehalose-specific IIBC component / PTS system,
trehalose-specific IIA component [Streptococcus pyogenes
MGAS10270]
gi|94544868|gb|ABF34916.1| PTS system, trehalose-specific IIBC component / PTS system,
trehalose-specific IIA component [Streptococcus pyogenes
MGAS10270]
Length = 674
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 210/659 (31%), Positives = 320/659 (48%), Gaps = 62/659 (9%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AK ++ +GGK+NI + HC TR+RF L D +KA+ + K V GQ+Q
Sbjct: 4 FEQDAKSLLTAIGGKENIKAVTHCATRMRFVLNDNNKANVKEIEKISVVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N R + +++ +F P++ +
Sbjct: 64 VIIGNDVPVFYNDFTAVSGIEGVSKEAAKSAAKSNQNALQRVMTMLAEIFTPIIPAIIVG 123
Query: 124 GMIKGVVAIMAALGV----AKTDGAYVVLNAAGD-------------------------G 154
G+I G I+ ++ + + +V +AAGD
Sbjct: 124 GLILGFRNILESVPFEFLGQQVEKGKLVFDAAGDPVWNTIVRVSPFWSGVNHFLWLPGEA 183
Query: 155 LFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIF 214
+F FLP+ + + ++ Q + +G LV P + ++ AGTP
Sbjct: 184 IFHFLPVGITWSVTRKMGTTQILGIVLGICLVSPQLLNAYAV--------AGTPAAEIAK 235
Query: 215 S-----TFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLL 269
+ FF + I Y + V+P + A + A +E ++K IP+VV + VPF +L+
Sbjct: 236 NWVWDFGFFTINRI----GYQAQVIPALLAGLSLAYLEIFWRKRIPEVVSMIFVPFLSLI 291
Query: 270 ITVPLAFLVIGPV-MSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GLV 326
+ LA V+GP+ + + + G+ L+G + GA + LV+ GLH +
Sbjct: 292 PALILAHTVLGPIGWTIGKGISFVVLAGLTGPVKWLFGAIFGALYAPLVITGLHHMTNAI 351
Query: 327 PLAILELQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTE 384
++ L IA+ AQ A+ +M EE+ ++S+PA ISA GVTE
Sbjct: 352 DTQLIADTATRTTGLWPMIALSNIAQGSAVFAYYLMNRHEEREAEISLPAAISAYLGVTE 411
Query: 385 PAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIH 444
PA++G+ + PF+ I + G F+V+ +G GL P F+ A N +I
Sbjct: 412 PALFGVNVKYVYPFVAGMIGSGIAGLLSTTFNVQANSIGVGGL---PGFM-AINVKYMIP 467
Query: 445 FLIAIVANFVLGFGLTQLIKIPNLFGGPS-EKDAAESLDSEKERVSAGI-----TEQVVT 498
F I + V+ LT + ++ E E+ SE +A T +T
Sbjct: 468 FFICMAVAIVVPMFLTFFFRKSHIMTKTEDEAKLPETPVSEDPAATAPHKTMQGTVITLT 527
Query: 499 SPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDD 558
SPL GEV AL + D VFA G MG+G ++P+ G +VAP D + +LFPT HAI L T +
Sbjct: 528 SPLTGEVKALSEAVDPVFAQGVMGQGALLQPTEGVLVAPCDAEVSVLFPTKHAICLVTTE 587
Query: 559 GAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTN 617
G ELL+H+GMDTV LDG+GF A V QG +VK GQ L+ FDI I EAGY TP++VTN
Sbjct: 588 GLELLMHIGMDTVNLDGQGFEALVKQGDQVKAGQTLIQFDIAAISEAGYATETPLVVTN 646
>gi|50915129|ref|YP_061101.1| PTS system, trehalose-specific IIBC component [Streptococcus
pyogenes MGAS10394]
gi|50904203|gb|AAT87918.1| PTS system, trehalose-specific IIBC component [Streptococcus
pyogenes MGAS10394]
Length = 674
Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 208/660 (31%), Positives = 319/660 (48%), Gaps = 64/660 (9%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AK ++ +GGK+NI + HC TR+RF L D +KA+ + K V GQ+Q
Sbjct: 4 FEQDAKSLLTAIGGKENIKAVTHCATRMRFVLNDNNKANVKEIEKISVVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N R + +++ +F P++ +
Sbjct: 64 VIIGNDVPVFYNDFTAVSGIEGVSKEAAKSAAKSNQNALQRVMTMLAEIFTPIIPAIIVG 123
Query: 124 GMIKGVVAIMAALGV----AKTDGAYVVLNAAGD-------------------------G 154
G+I G I+ ++ + + +V +AAGD
Sbjct: 124 GLILGFRNILESVPFEFLGQQVEKGKLVFDAAGDPVWNTIVRVSPFWSGVNHFLWLPGEA 183
Query: 155 LFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIF 214
+F FLP+ + + ++ Q + +G LV P + ++ AGTP
Sbjct: 184 IFHFLPVGITWSVTRKMGTTQILGIVLGICLVSPQLLNAYAV--------AGTPAAEIAK 235
Query: 215 S-----TFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLL 269
+ FF + I Y + V+P + A + A +E ++K IP+VV + VPF +L+
Sbjct: 236 NWVWDFGFFTINRI----GYQAQVIPALLAGLSLAYLEIFWRKRIPEVVSMIFVPFLSLI 291
Query: 270 ITVPLAFLVIGPVMSW--ASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GL 325
+ LA V+GP+ W + + G+ L+G + GA + LV+ GLH
Sbjct: 292 PALILAHTVLGPI-GWIIGKGISFVVLAGLTGPVKWLFGAIFGALYAPLVITGLHHMTNA 350
Query: 326 VPLAILELQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVT 383
+ ++ L IA+ AQ A+ +M EE+ ++S+PA ISA GVT
Sbjct: 351 IDTQLIADTATRTTGLWPMIALSNIAQGSAVFAYYLMNRHEEREAEISLPAAISAYLGVT 410
Query: 384 EPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLI 443
EPA++G+ + PF+ I + G F+V+ +G GL P F+ A N +I
Sbjct: 411 EPALFGVNVKYVYPFVAGMIGSGIAGLLSTTFNVQANSIGVGGL---PGFM-AINVKYMI 466
Query: 444 HFLIAIVANFVLGFGLTQLIKIPNLFGGPS------EKDAAESLDSEKERVSAGITEQVV 497
F I + V+ LT + ++ E +E+ + + T +
Sbjct: 467 PFFICMAVAIVVSMFLTFFFRKSHIMTKTEDEAKLPETPVSEAPAATAPHKTMQGTVITL 526
Query: 498 TSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATD 557
TSPL GEV AL + D VFA G MG+G ++P+ G +VAP D + +LFPT HAI L T
Sbjct: 527 TSPLTGEVKALSEAVDPVFAQGIMGQGALLQPTEGVLVAPCDAEVSVLFPTKHAICLVTT 586
Query: 558 DGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTN 617
+G ELL+H+GMDTV LDG+GF A V QG +VK GQ L+ FDI I EAGY TP++VTN
Sbjct: 587 EGLELLMHIGMDTVNLDGQGFEALVKQGDQVKAGQTLIQFDIAAISEAGYATETPLVVTN 646
>gi|19746968|ref|NP_608104.1| putative PTS system enzyme II [Streptococcus pyogenes MGAS8232]
gi|19749221|gb|AAL98603.1| putative PTS system enzyme II [Streptococcus pyogenes MGAS8232]
Length = 674
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 208/657 (31%), Positives = 321/657 (48%), Gaps = 58/657 (8%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AK ++ +GGK+NI + HC TR+RF L D +KA+ + K V GQ+Q
Sbjct: 4 FEQDAKSLLTAIGGKENIKAVTHCATRMRFVLNDNNKANVKEIEKISVVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N + + +++ +F P++ +
Sbjct: 64 VIIGNDVPVFYNDFTAVSGIEGVSKEAAKSAAKSNQNALQQVMTMLAEIFTPIIPAIIVG 123
Query: 124 GMIKGVVAIMAALGV----AKTDGAYVVLNAAGD-------------------------G 154
G+I G I+ ++ + + +V +AAGD
Sbjct: 124 GLILGFRNILESVPFEFLGQQVEKGKLVFDAAGDPVWNTIVRVSPFWSGVNHFLWLPGEA 183
Query: 155 LFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIF 214
+F FLP+ + + ++ Q + +G LV P + ++ AGTP + I
Sbjct: 184 IFHFLPVGITWSVTRKMGTTQILGIVLGICLVSPQLLNAYAV--------AGTP-AAEIA 234
Query: 215 STF---FGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLIT 271
+ FG II Y + V+P + A + A +E ++K IP+VV + VPF +L+
Sbjct: 235 KNWVWDFGFFII-NRIGYQAQVIPALLAGLSLAYLEIFWRKRIPEVVSMIFVPFLSLIPA 293
Query: 272 VPLAFLVIGPV-MSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GLVPL 328
+ LA V+GP+ + + + G+ L+G + GA + LV+ GLH +
Sbjct: 294 LILAHTVLGPIGWTIGKGISFVVLAGLTGPVKWLFGAIFGALYAPLVITGLHHMTNAIDT 353
Query: 329 AILELQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPA 386
++ L IA+ AQ A+ +M EE+ ++S+PA ISA GVTEPA
Sbjct: 354 QLIADTATRTTGLWPMIALSNIAQGSAVFAYYLMNRHEEREAEISLPAAISAYLGVTEPA 413
Query: 387 IYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFL 446
++G+ + PF+ I + G F+V+ +G GL P F+ A N +I F
Sbjct: 414 LFGVNVKYVYPFVAGMIGSGIAGLLSTSFNVQANSIGVGGL---PGFM-AINVKYMIPFF 469
Query: 447 IAIVANFVLGFGLTQLIKIPNLFGGPS------EKDAAESLDSEKERVSAGITEQVVTSP 500
I + V+ LT + ++ E +E+ + + T +TSP
Sbjct: 470 ICMAVAIVVPMFLTFFFRKSHIMTKTEDEAKLPETPVSEAPAATAPHKTMQGTVITLTSP 529
Query: 501 LAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGA 560
L GEV AL + D VFA G MG+G ++P+ G +VAP D + +LFPT HAI L T +G
Sbjct: 530 LTGEVKALSEAVDPVFAQGVMGQGALLQPTEGVLVAPCDAEVSVLFPTKHAICLVTTEGL 589
Query: 561 ELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTN 617
ELL+H+GMDTV LDG+GF A V QG +VK GQ L+ FDI I EAGY TP++VTN
Sbjct: 590 ELLMHIGMDTVNLDGQGFEALVKQGDQVKAGQTLIQFDIAAISEAGYATETPLVVTN 646
>gi|77409008|ref|ZP_00785728.1| PTS system, IIABC components [Streptococcus agalactiae COH1]
gi|77172392|gb|EAO75541.1| PTS system, IIABC components [Streptococcus agalactiae COH1]
Length = 639
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 216/666 (32%), Positives = 339/666 (50%), Gaps = 60/666 (9%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TE+AK ++ +GG N+ + HC TRLR +KDE+ D + + + V GQYQ+
Sbjct: 5 TEIAKQVINAIGGASNVRSVAHCATRLRIMVKDETVIDKNTVENIEKVQGAFFNSGQYQI 64
Query: 66 VIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+ G V +Y+ V+ + S + A +GN F R I +F P+L + A G
Sbjct: 65 IFGTGTVNKIYDEVVAQGLPTLSTSDQKAEAAKQGNAFQRAIRTFGDVFVPLLPAIVATG 124
Query: 125 MIKGVVA------IMAALGVAK----TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMN 174
+ G+ ++A G + Y D F F P +++ +A + F N
Sbjct: 125 LFMGIRGAINNDTVLALFGTTSKAFSSSNFYTYTVVLTDTAFAFFPALISWSAFRVFGGN 184
Query: 175 QFTALAIGFALV---YPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLS 231
L +G +V PN A + + PI+ FFG P Y +
Sbjct: 185 PVIGLVLGLMMVNSALPNAWAVASGD--------AHPIK------FFGF---IPVVGYQN 227
Query: 232 TVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVG 291
+VLP GAK+EK K IPDV+ + +VPF T + LA VIGP+ + V
Sbjct: 228 SVLPAFFVGLLGAKLEKWLHKKIPDVLDLLLVPFLTFTVMSILALFVIGPIFHSVENYVL 287
Query: 292 ALFTGIYDFSPVLYGIVLGAAWQVLVMFGLH--WGLVPLAILELQ-KGP-GVILVASIAI 347
A + + L G++LG Q++V+ G+H + L+ ++ K P I+ A++
Sbjct: 288 AGTKFVLNLPLGLSGLILGGVHQIIVVTGVHHIFNLLEAQLIAADGKDPFNAIITAAMT- 346
Query: 348 CFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQAGA L + ++TK +K++ L+ PA +SA G+TEPAI+G+ L PFIM I+GA
Sbjct: 347 --AQAGATLAVGVKTKNKKLKALAFPAALSAGLGITEPAIFGVNLRFGKPFIMGLIAGA- 403
Query: 408 TGAYLAFFDVKMQVMG-GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIP 466
G +LA +++ G G G+ IP + N ++ +LI ++ L F LT +
Sbjct: 404 AGGWLASI---LKLAGTGFGITIIPGTLLYLNGQ-IVKYLIMVIGTTSLAFVLTYM---- 455
Query: 467 NLFGGPSEKDAA---------ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFA 517
FG + + A E+ D ++ + + + SPL G+V+AL+ D VF+
Sbjct: 456 --FGYEDKDEKAVAEVSPLVEETDDDPTITQTSQLRAETIVSPLDGQVIALDTVSDPVFS 513
Query: 518 SGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKG 577
SG MG G+AI+P + +P DG +++ F T HA G+ +D GAE+LIH+G+DTV ++G G
Sbjct: 514 SGIMGDGLAIKPRGNTIYSPVDGFVQIAFETGHAYGIKSDKGAEILIHIGIDTVTMNGTG 573
Query: 578 FTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAK-GEIQLGN 636
FT+ V KVKKG +L +FD I EAG T IIVTNTA++ + L K G + G+
Sbjct: 574 FTSKVKADQKVKKGDILGTFDSAKIAEAGLDNTAMIIVTNTADFADVIPLVKEGVVTTGD 633
Query: 637 QLLELK 642
++++K
Sbjct: 634 MIIDVK 639
>gi|139474542|ref|YP_001129258.1| sugar phosphotransferase system (PTS), IIABC component
[Streptococcus pyogenes str. Manfredo]
gi|134272789|emb|CAM31065.1| sugar phosphotransferase system (PTS), IIABC component
[Streptococcus pyogenes str. Manfredo]
Length = 674
Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats.
Identities = 208/660 (31%), Positives = 319/660 (48%), Gaps = 64/660 (9%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AK ++ +GGK+NI + HC TR+RF L D +KA+ + K V GQ+Q
Sbjct: 4 FEQDAKSLLTAIGGKENIKAVTHCATRMRFVLNDNNKANVKEIEKISVVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N R + +++ +F P++ +
Sbjct: 64 VIIGNDVPVFYNDFTAVSGIEGVSKEAAKSAAKSNQNALQRVMTMLAEIFTPIIPAIIVG 123
Query: 124 GMIKGVVAIMAALGV----AKTDGAYVVLNAAGD-------------------------G 154
G+I G I+ ++ + + +V +AAGD
Sbjct: 124 GLILGFRNILESVPFEFLGQQVEKGKLVFDAAGDPVWNTIVRVSPFWSGVNHFLWLPGEA 183
Query: 155 LFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIF 214
+F FLP+ + + ++ Q + +G LV P + ++ AGTP
Sbjct: 184 IFHFLPVGITWSVTRKMGTTQILGIVLGICLVSPQLLNAYAV--------AGTPAAEIAK 235
Query: 215 S-----TFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLL 269
+ FF + I Y + V+P + A + A +E ++K IP+VV + VPF +L+
Sbjct: 236 NWVWDFGFFTINRI----GYQAQVIPALLAGLSLAYLEIFWRKRIPEVVSMIFVPFLSLI 291
Query: 270 ITVPLAFLVIGPVMSW--ASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GL 325
+ LA V+GP+ W + + G+ L+G + GA + LV+ GLH
Sbjct: 292 PALILAHTVLGPI-GWIIGKGISFVVLAGLTGPVKWLFGAIFGALYAPLVITGLHHMTNA 350
Query: 326 VPLAILELQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVT 383
+ ++ L IA+ AQ A+ +M EE+ ++S+PA ISA GVT
Sbjct: 351 IDTQLIADTATRTTGLWPMIALSNIAQGSAVFAYYLMNRHEEREAEISLPAAISAYLGVT 410
Query: 384 EPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLI 443
EPA++G+ + PF+ I + G F+V+ +G GL P F+ A N +I
Sbjct: 411 EPALFGVNVKYVYPFVAGMIGSGIAGLLSTTFNVQANSIGVGGL---PGFM-AINVKYMI 466
Query: 444 HFLIAIVANFVLGFGLTQLIKIPNLFGGPS------EKDAAESLDSEKERVSAGITEQVV 497
F I + V+ LT + ++ E +E+ + + T +
Sbjct: 467 PFFICMAVAIVVPMFLTFFFRKSHIMTKTEDEAKLPETPVSEAPAATAPHKTMQGTVITL 526
Query: 498 TSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATD 557
TSPL GEV AL + D VFA G MG+G ++P+ G +VAP D + +LFPT HAI L T
Sbjct: 527 TSPLTGEVKALSEAVDPVFAQGIMGQGALLQPTEGVLVAPCDAEVSVLFPTKHAICLVTT 586
Query: 558 DGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTN 617
+G ELL+H+GMDTV LDG+GF A V QG +VK GQ L+ FDI I EAGY TP++VTN
Sbjct: 587 EGLELLMHIGMDTVNLDGQGFEALVKQGDQVKAGQTLIQFDIAAISEAGYATETPLVVTN 646
>gi|116495559|ref|YP_807293.1| sucrose PTS, EIIBCA [Lactobacillus casei ATCC 334]
gi|116105709|gb|ABJ70851.1| sucrose PTS, EIIBCA [Lactobacillus casei ATCC 334]
Length = 653
Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats.
Identities = 208/665 (31%), Positives = 335/665 (50%), Gaps = 45/665 (6%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MAK+Y E AK I+ VG ++N+ + HC TRLRF +KD D L K V V
Sbjct: 1 MAKNYEEEAKAILKLVG-ENNVDSVTHCQTRLRFVVKDRKAIDDKALEKLPEVKGVFYGS 59
Query: 61 GQYQVVIGNHV-PDVYETVLKVAGISG-EGSVDADDDAVEGN----LFDRFIALVSGLFQ 114
GQYQV+IG V DVY + K+ ++ G DAD N + R +A++SG+F
Sbjct: 60 GQYQVIIGTGVVNDVYAAIAKLGTVNAIYGKDDADTAGKTSNEHKTVVQRLMAMLSGIFI 119
Query: 115 PMLGTLSAAGMIKGVVAIMAALGVAKTDGAY---------VVLNAAGDGLFQFLPLILAI 165
P++ ++A G+ G+ + V K GA V++ D +F FLP ++
Sbjct: 120 PIIPVIAATGLFLGLKSAATNAQVLKLFGAVPSDIPASLTSVISVLTDTVFAFLPALIVW 179
Query: 166 TAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFP 225
+ + FK + IG LV P + + Y++ G+ + F LP++
Sbjct: 180 STFRYFKGTPIIGIVIGLMLVSPILPNA-------YSVADGS---AKAIMLFGWLPVVGS 229
Query: 226 ASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSW 285
S VL + A + GAK+E F++ +P+V++ + PF T+L+T + + +GP++
Sbjct: 230 QGS----VLTALVAGFIGAKLELFFRRHMPNVLEQILTPFLTMLVTFAIMIMGVGPIVHA 285
Query: 286 ASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAI-LELQKGPGVILVAS 344
+ + + G ++GAA+ ++V+ G+H ++ + L G ++
Sbjct: 286 IESGMLVGVEAVIHLPFGIGGFLIGAAYPLMVLIGIHQTMIAIETSLLASTGLNPLITLE 345
Query: 345 IAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRL-PFIMTCI 403
FA G L I +R + K + S+ AF S LFGV+EP ++G+ + P I+T +
Sbjct: 346 AMYGFANLGVALAIFLRARSNKAKATSMGAFTSQLFGVSEPTLFGVLIRYNFRPLIVTVL 405
Query: 404 SGALTGAYLAFFDVKMQVMGGMGLFAIPSFIE-ASNSMTLIHFLIAIVANFVLGFGLTQL 462
+ + A L+ +V GL +PS++ N L+ + I + V F T
Sbjct: 406 TSGIGAAILSMLNV---AANSYGLAVVPSYLMYIYNGHALLWYTIVSLGTVVAAFVATNA 462
Query: 463 IKIPNLFGGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMG 522
IP P +++ +S+ +++ V +P+ GE VAL+ D VFASG MG
Sbjct: 463 FAIPKEVLTPDG-----DIETANAVISSTVSDNKVYAPVGGETVALDQVSDPVFASGMMG 517
Query: 523 KGVAI---EPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFT 579
+G+AI EP + +V AP G + ++ T HA GL TDDG E+L+H+G+DTV L G FT
Sbjct: 518 EGMAIKPAEPGINKVYAPQSGTLSVVADTGHAYGLTTDDGMEILVHLGIDTVNLKGAPFT 577
Query: 580 AHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIE-VLAKGEIQLGNQL 638
V G V KG LL +FD IK+AG TT +++TN+ +Y +IE V A +Q G L
Sbjct: 578 VAVKAGQHVNKGDLLGTFDQAAIKKAGLDATTIVLITNSKSYARIEPVAADTTVQAGADL 637
Query: 639 LELKK 643
L +++
Sbjct: 638 LAVQR 642
>gi|76787932|ref|YP_330304.1| PTS system, sucrose-specific IIABC component [Streptococcus
agalactiae A909]
gi|76562989|gb|ABA45573.1| PTS system, sucrose-specific IIABC component [Streptococcus
agalactiae A909]
Length = 639
Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats.
Identities = 215/666 (32%), Positives = 338/666 (50%), Gaps = 60/666 (9%)
Query: 6 TELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQV 65
TE+AK ++ +GG N+ + HC TRLR +KDE+ D + + + V GQYQ+
Sbjct: 5 TEIAKQVINAIGGASNVRSVAHCATRLRVMVKDETVIDKNTVENIEKVQGAFFNSGQYQI 64
Query: 66 VIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSAAG 124
+ G V +Y+ V+ + S + A +GN F R I +F P+L + A G
Sbjct: 65 IFGTGTVNKIYDEVVAQGLPTSSTSDQKAEAAKQGNAFQRAIRTFGDVFVPLLPAIVATG 124
Query: 125 MIKGVVA------IMAALGVAK----TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKMN 174
+ G+ ++A G + Y D F F P +++ +A + F N
Sbjct: 125 LFMGIRGAINNDTVLALFGTTSKAFSSSNFYTYTVVLTDTAFAFFPALISWSAFRVFGGN 184
Query: 175 QFTALAIGFALV---YPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLS 231
L +G +V PN A + + PI+ FFG P Y +
Sbjct: 185 PVIGLVLGLMMVNSALPNAWAVASGD--------AHPIK------FFGF---IPVVGYQN 227
Query: 232 TVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVG 291
+VLP GAK+EK K IPDV+ + +VPF T + LA VIGP+ + V
Sbjct: 228 SVLPAFFVGLLGAKLEKWLHKKIPDVLDLLLVPFLTFTVMSILALFVIGPIFHSVENYVL 287
Query: 292 ALFTGIYDFSPVLYGIVLGAAWQVLVMFGLH--WGLVPLAILELQ-KGP-GVILVASIAI 347
A + + L G++LG Q++V+ G+H + L+ ++ K P I+ A++
Sbjct: 288 AGTKFVLNLPLGLSGLILGGVHQIIVVTGVHHIFNLLEAQLIAADGKDPFNAIITAAMT- 346
Query: 348 CFAQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGAL 407
AQAGA L + ++TK +K++ L+ PA +SA G+TEPAI+G+ L PFIM I+GA
Sbjct: 347 --AQAGATLAVGVKTKNKKLKALAFPAALSAGLGITEPAIFGVNLRFGKPFIMGLIAGA- 403
Query: 408 TGAYLAFFDVKMQVMG-GMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIP 466
G +LA +++ G G G+ IP + N ++ +LI ++ L F LT +
Sbjct: 404 AGGWLASI---LKLAGTGFGITIIPGTLLYLNGQ-IVKYLIMVIGTTSLAFVLTYM---- 455
Query: 467 NLFGGPSEKDAA---------ESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFA 517
FG + + A E+ D ++ + + + SPL G+V+AL+ D VF+
Sbjct: 456 --FGYEDKDEKAVAEVSPLVEETDDDPTITQTSQLRAETIVSPLDGQVIALDTVSDPVFS 513
Query: 518 SGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKG 577
SG MG G+AI+P + +P DG +++ F T HA G+ +D GAE+LIH+G+DTV ++G G
Sbjct: 514 SGIMGDGLAIKPRGNTIYSPVDGFVQIAFETGHAYGIKSDKGAEILIHIGIDTVTMNGTG 573
Query: 578 FTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAK-GEIQLGN 636
FT+ V KVKKG +L +FD I EAG IIVTNTA++ + L K G + G+
Sbjct: 574 FTSKVKADQKVKKGDILGTFDSAKIAEAGLDNIAMIIVTNTADFADVVPLVKEGVVTTGD 633
Query: 637 QLLELK 642
++++K
Sbjct: 634 MIIDVK 639
>gi|56808422|ref|ZP_00366171.1| COG1263: Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Streptococcus pyogenes M49 591]
Length = 666
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 208/657 (31%), Positives = 317/657 (48%), Gaps = 68/657 (10%)
Query: 10 KDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVIGN 69
K ++ +GGK+NI + HC TR+RF L D +KA+ + K V GQ+QV+IGN
Sbjct: 1 KSLLTAIGGKENIKAVTHCATRMRFVLNDNNKANVKKIEKISVVKGTFTNAGQFQVIIGN 60
Query: 70 HVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAAGMIKG 128
VP Y V+GI G A A N R + +++ +F P++ + G+I G
Sbjct: 61 DVPVFYNDFTAVSGIEGVSKEAAKSAAKSNQNALQRVMTMLAEIFTPIIPAIIVGGLILG 120
Query: 129 VVAIMAALGV----AKTDGAYVVLNAAGD-------------------------GLFQFL 159
I+ ++ + + +V +AAGD +F FL
Sbjct: 121 FRNILESVPFEFLGQQVEKGKLVFDAAGDPVWNTIVRVSPFWSGVNHFLWLPGEAIFHFL 180
Query: 160 PLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFS---- 215
P+ + + ++ Q + +G LV P + ++ AGTP +
Sbjct: 181 PVGITWSVTRKMGTTQILGIVLGICLVSPQLLNAYAV--------AGTPAAEIAKNWVWD 232
Query: 216 -TFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPL 274
FF + I Y + V+P + A + A +E ++K IP+VV + VPF +L+ + L
Sbjct: 233 FGFFTINRI----GYQAQVIPALLAGLSLAYLEIFWRKRIPEVVSMIFVPFLSLIPALIL 288
Query: 275 AFLVIGPV-MSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GLVPLAIL 331
A V+GP+ + + + G+ L+G + GA + LV+ GLH + ++
Sbjct: 289 AHTVLGPIGWTIGKGISFVVLAGLTGPVKWLFGAIFGALYAPLVITGLHHMTNAIDTQLI 348
Query: 332 ELQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYG 389
L IA+ AQ A+ +M EE+ ++S+PA ISA GVTEPA++G
Sbjct: 349 ADTATRTTGLWPMIALSNIAQGSAVFAYYLMNRHEEREAEISLPAAISAYLGVTEPALFG 408
Query: 390 ITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAI 449
+ + PF+ I + G F+V+ +G GL P F+ A N +I F I +
Sbjct: 409 VNVKYVYPFVAGMIGSGIAGLLSTTFNVQANAIGVGGL---PGFM-AINVKYMIPFFICM 464
Query: 450 VANFVLGFGLTQLIKIPNLFGGPSEK---------DAAESLDSEKERVSAGITEQVVTSP 500
V+ LT + ++ ++ DA + K IT +TSP
Sbjct: 465 AVAIVVPMFLTFFFRKSHIMTKTEDEAKLPETPVSDAPVATAPHKTMQGTVIT---LTSP 521
Query: 501 LAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGA 560
L GEV AL + D VFA G MG+G ++P+ G +VAP D + +LFPT HAI L T +G
Sbjct: 522 LTGEVKALSEAVDPVFAQGVMGQGALLQPTEGVLVAPCDAEVSVLFPTKHAICLVTTEGL 581
Query: 561 ELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTN 617
ELL+H+GMDTV LDG+GF A V QG +VK GQ L+ FDI I EAGY TP++VTN
Sbjct: 582 ELLMHIGMDTVNLDGQGFEALVKQGDQVKAGQTLIQFDIAAISEAGYATETPLVVTN 638
>gi|21911322|ref|NP_665590.1| putative PTS system enzyme II [Streptococcus pyogenes MGAS315]
gi|28896695|ref|NP_803045.1| putative PTS system, enzyme II [Streptococcus pyogenes SSI-1]
gi|21905537|gb|AAM80393.1| putative PTS system enzyme II [Streptococcus pyogenes MGAS315]
gi|28811949|dbj|BAC64878.1| putative PTS system, enzyme II [Streptococcus pyogenes SSI-1]
Length = 674
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 206/659 (31%), Positives = 318/659 (48%), Gaps = 62/659 (9%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AK ++ +GGK+NI + HC TR+RF L D +KA+ + K V GQ+Q
Sbjct: 4 FEQDAKSLLTAIGGKENIKAVTHCATRMRFVLNDNNKANVKEIEKISVVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+ I G A A N R + +++ +F P++ +
Sbjct: 64 VIIGNDVPVFYNDFTAVSSIEGVSKEAAKSAAKSNQNALQRVMTMLAEIFTPIIPAIIVG 123
Query: 124 GMIKGVVAIMAALGV----AKTDGAYVVLNAAGD-------------------------G 154
G+I G I+ ++ + + +V +AAGD
Sbjct: 124 GLILGFRNILESVPFEFLGQQVEKGKLVFDAAGDPVWNTIVRVSPFWSGVNHFLWLPGEA 183
Query: 155 LFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIF 214
+F FLP+ + + ++ Q + +G LV P + ++ AGTP
Sbjct: 184 IFHFLPVGITWSVTRKMGTTQILGIVLGICLVSPQLLNAYAV--------AGTPAAEIAK 235
Query: 215 S-----TFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLL 269
+ FF + I Y + V+P + A + A +E ++K IP+VV + VPF +L+
Sbjct: 236 NWVWDFGFFTINRI----GYQAQVIPALLAGLSLAYLEIFWRKRIPEVVSMIFVPFLSLI 291
Query: 270 ITVPLAFLVIGPV-MSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GLV 326
+ LA V+GP+ + + + G+ L+G + GA + LV+ GLH +
Sbjct: 292 PALILAHTVLGPIGWTIGKGISFVVLAGLTGPVKWLFGAIFGALYAPLVITGLHHMTNAI 351
Query: 327 PLAILELQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTE 384
++ L IA+ AQ A+ +M EE+ ++S+PA ISA GVTE
Sbjct: 352 DTQLIADTATRTTGLWPMIALSNIAQGSAVFAYYLMNRHEEREAEISLPAAISAYLGVTE 411
Query: 385 PAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIH 444
PA++G+ + PF+ I + G F+V+ +G GL P F+ A N +I
Sbjct: 412 PALFGVNVKYVYPFVAGMIGSGIAGLLSTTFNVQANAIGVGGL---PGFM-AINVKYMIP 467
Query: 445 FLIAIVANFVLGFGLTQLIKIPNLFGGPS------EKDAAESLDSEKERVSAGITEQVVT 498
F I + V+ LT + ++ E +E+ + + T +T
Sbjct: 468 FFICMAVAIVVPMFLTFFFRKSHIMTKTEDEAKLPETPVSEAPAATAPHKTMQGTVITLT 527
Query: 499 SPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDD 558
SPL GEV AL + D VFA G MG+G ++P+ G +VAP D + +LFPT HAI L T +
Sbjct: 528 SPLTGEVKALSEAVDPVFAQGVMGQGALLQPTEGVLVAPCDAEVSVLFPTKHAICLVTTE 587
Query: 559 GAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTN 617
G ELL+H+GMDTV LDG+GF A V QG +VK GQ L+ FDI I EAGY TP++VTN
Sbjct: 588 GLELLMHIGMDTVNLDGQGFEALVKQGDQVKAGQTLIQFDIAAISEAGYATETPLVVTN 646
>gi|153855061|ref|ZP_01996255.1| hypothetical protein DORLON_02262 [Dorea longicatena DSM 13814]
gi|149752376|gb|EDM62307.1| hypothetical protein DORLON_02262 [Dorea longicatena DSM 13814]
Length = 647
Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 210/660 (31%), Positives = 338/660 (51%), Gaps = 34/660 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
DY + A+DI+ HVGG NI HC TRLR + D K + L DGV V +A GQ
Sbjct: 2 DYRKTAQDILDHVGGSKNIASAAHCATRLRLVIADNKKVSKEALENVDGVKGVFEASGQL 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLS 121
Q+++G V V+ + +AGI+ +A + A E N F R I L+ +F P++ +
Sbjct: 62 QIILGTGTVNKVFAEFIDIAGITASSKAEAKEAAAEKQNWFMRAIKLLGDIFVPIIPAIV 121
Query: 122 AAGMIKGVVAIMAALGVAKTDG---------AYVVLNAAGDGLFQFLPLILAITAAKRFK 172
A+G + G IM +L ++G YV N + + FL +++A +AAK F
Sbjct: 122 ASGFLMG---IMNSLDFMNSNGFLHINTHSSIYVFANLFSNIAYTFLQILIAFSAAKAFG 178
Query: 173 MNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLST 232
NQ+ IG +++P++ ++T T S FFGL I Y
Sbjct: 179 ANQYLGAVIGMIMIHPSLQNAYTV---------ATEGVQQTQSVFFGLFKI-DMVGYQGH 228
Query: 233 VLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGA 292
V+PVI AVW A IEK KI+P+V+ +F+ P ++ +T L ++GP+ WA + +
Sbjct: 229 VIPVIIAVWILAVIEKKLHKIVPEVLDLFVTPLVSVFVTGYLTLSIVGPIFVWAENAILG 288
Query: 293 LFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQK-GPGVILVASIAICFAQ 351
+ + +++G + V+ G+H + I +L K G L + A AQ
Sbjct: 289 AIQWMLTLPLGIGSLIMGGLYAPTVVTGIHQMYTAIDIGQLAKYGVTYWLPLASAANVAQ 348
Query: 352 AGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTGAY 411
A L + +++K++K++ L++P+ +SA G+TEPAI+G+ L PFI CI G Y
Sbjct: 349 GAAALAVGIKSKDKKIKSLALPSSLSAFMGITEPAIFGVNLRFFKPFIAGCIGGGCGALY 408
Query: 412 LAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGG 471
+ + + G G+F I + LI +IA+ FV+ F + + +
Sbjct: 409 ASLVHLGAKGTGVTGIFGILLCLNQP-LQYLIEMVIAVGVAFVISFLIYKDAEPKAATAD 467
Query: 472 PSEKDAAESLDSEKERVSAGIT--------EQVVTSPLAGEVVALEDTPDAVFASGAMGK 523
+E A E++++ + E+ +TSP+ G + L + D FAS +G
Sbjct: 468 AAETAAVENMETTDAVATDDTAADTTAATTEETLTSPVNGTQIPLAEVADETFASEMLGA 527
Query: 524 GVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVV 583
VA+EP+ G++VAP DG + +F T HA+ + T+ G ELLIH+G+DTV +DGKGFT V
Sbjct: 528 TVAVEPADGKIVAPCDGEVSNIFETGHAVCITTEAGGELLIHIGIDTVKMDGKGFTKKVS 587
Query: 584 QGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELKK 643
G KV G +L+ D++ IK AGY TT +I+TNT + + E++ ++++ L K
Sbjct: 588 DGDKVHAGDILVETDLEEIKNAGYQTTTMMILTNTDEFGNVTKAEPAEVKTTSKVMTLTK 647
>gi|94995272|ref|YP_603370.1| PTS system, trehalose-specific IIBC component / PTS system,
trehalose-specific IIA component [Streptococcus pyogenes
MGAS10750]
gi|94548780|gb|ABF38826.1| PTS system, trehalose-specific IIBC component / PTS system,
trehalose-specific IIA component [Streptococcus pyogenes
MGAS10750]
Length = 674
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 207/660 (31%), Positives = 318/660 (48%), Gaps = 64/660 (9%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AK ++ +GGK+NI + HC TR+RF L D +KA+ + K V GQ+Q
Sbjct: 4 FEQDAKSLLTAIGGKENIKAVTHCATRMRFVLNDNNKANVKEIEKISVVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N R + +++ +F P++ +
Sbjct: 64 VIIGNDVPVFYNDFTAVSGIEGVSKEAAKSAAKSNQNALQRVMTMLAEIFTPIIPAIIVG 123
Query: 124 GMIKGVVAIMAALGV----AKTDGAYVVLNAAGD-------------------------G 154
G+I G I+ ++ + + +V +AAGD
Sbjct: 124 GLILGFRNILESVPFEFLGQQVEKGKLVFDAAGDPVWNTIVRVSPFWSGVNHFLWLPGEA 183
Query: 155 LFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIF 214
+F FLP+ + + ++ Q + +G LV P + ++ AGTP
Sbjct: 184 IFHFLPVGITWSVTRKMGTTQILGIVLGICLVSPQLLNAYAV--------AGTPAAEIAK 235
Query: 215 S-----TFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLL 269
+ FF + I Y + V+P + A + A +E ++K IP+VV + VPF +L+
Sbjct: 236 NWVWDFGFFTINRI----GYQAQVIPALLAGLSLAYLEIFWRKRIPEVVSMIFVPFLSLI 291
Query: 270 ITVPLAFLVIGPVMSW--ASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GL 325
+ LA V+GP+ W + + G+ L+G + GA + LV+ GLH
Sbjct: 292 PALILAHTVLGPI-GWIIGKGISFVVLAGLTGPVKWLFGAIFGALYAPLVITGLHHMTNA 350
Query: 326 VPLAILELQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVT 383
+ ++ L IA+ AQ A+ +M EE+ ++S+PA ISA GVT
Sbjct: 351 IDTQLIADTATRTTGLWPMIALSNIAQGSAVFAYYLMNRHEEREAEISLPAAISAYLGVT 410
Query: 384 EPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLI 443
EPA++G+ + PF+ I + G F+V+ +G GL P F+ A N +I
Sbjct: 411 EPALFGVNVKYVYPFVAGMIGSGIAGLLSTTFNVQANSIGVGGL---PGFM-AINVKYMI 466
Query: 444 HFLIAIVANFVLGFGLTQLIKIPNLFGGPS------EKDAAESLDSEKERVSAGITEQVV 497
F I + V+ LT + ++ E +E+ + + T +
Sbjct: 467 PFFICMAVAIVVPMFLTFFFRKSHIMTKTEDEAKLPETPVSEAPAATAPHKTMQGTVITL 526
Query: 498 TSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATD 557
TSPL GEV AL + D VFA G MG+G ++P+ G +VAP D + +LFPT HAI L T
Sbjct: 527 TSPLTGEVKALSEAVDPVFAQGVMGQGALLQPTEGVLVAPCDAEVSVLFPTKHAICLVTT 586
Query: 558 DGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTN 617
+G ELL+H+GMDTV L G+GF A V QG +VK GQ L+ FDI I EAGY TP++VTN
Sbjct: 587 EGLELLMHIGMDTVNLAGQGFEALVKQGDQVKAGQTLIQFDIAAISEAGYATETPLVVTN 646
>gi|15675853|ref|NP_270027.1| putative PTS system enzyme II [Streptococcus pyogenes M1 GAS]
gi|71911597|ref|YP_283147.1| PTS system, trehalose-specific IIBC component [Streptococcus
pyogenes MGAS5005]
gi|13623086|gb|AAK34748.1| putative PTS system enzyme II [Streptococcus pyogenes M1 GAS]
gi|71854379|gb|AAZ52402.1| PTS system, trehalose-specific IIBC component [Streptococcus
pyogenes MGAS5005]
Length = 674
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 208/662 (31%), Positives = 319/662 (48%), Gaps = 68/662 (10%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AK ++ +GGK+NI + HC TR+RF L D +KA+ + K V GQ+Q
Sbjct: 4 FEQDAKSLLTAIGGKENIKVVTHCATRMRFVLNDNNKANVKEIEKISVVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+ I G A A N R + +++ +F P++ +
Sbjct: 64 VIIGNDVPVFYNDFTAVSSIEGVSKEAAKSAAKSNQNALQRVMTMLAEIFTPIIPAIIVG 123
Query: 124 GMIKGVVAIMAALGV----AKTDGAYVVLNAAGD-------------------------G 154
G+I G I+ ++ + + +V +AAGD
Sbjct: 124 GLILGFRNILESVPFEFLGQQVEKGKLVFDAAGDPVWNTIVRVSPFWSGVNHFLWLPGEA 183
Query: 155 LFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIF 214
+F FLP+ + + ++ Q + +G LV P + ++ AGTP
Sbjct: 184 IFHFLPVGITWSVTRKMGTTQILGIVLGICLVSPQLLNAYAV--------AGTPAAEIAK 235
Query: 215 S-----TFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLL 269
+ FF + I Y + V+P + A + A +E ++K IP+VV + VPF +L+
Sbjct: 236 NWVWDFGFFTINRI----GYQAQVIPALLAGLSLAYLEIFWRKRIPEVVSMIFVPFLSLI 291
Query: 270 ITVPLAFLVIGPV-MSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GLV 326
+ LA V+GP+ + + + G+ L+G + GA + LV+ GLH +
Sbjct: 292 PALILAHTVLGPIGWTIGKGISFVVLAGLTGPVKWLFGAIFGALYAPLVITGLHHMTNAI 351
Query: 327 PLAILELQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTE 384
++ L IA+ AQ A+ +M EE+ ++S+PA ISA GVTE
Sbjct: 352 DTQLIADTATRTTGLWPMIALSNIAQGSAVFAYYLMNRHEEREAEISLPAAISAYLGVTE 411
Query: 385 PAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIH 444
PA++G+ + PF+ I + G F+V+ +G GL P F+ A N +I
Sbjct: 412 PALFGVNVKYVYPFVAGMIGSGIAGLLSTTFNVQANSIGVGGL---PGFM-AINVKYMIP 467
Query: 445 FLIAIVANFVLGFGLTQLIKIPNLFGGPSEK---------DAAESLDSEKERVSAGITEQ 495
F I + V+ LT + ++ ++ DA + K IT
Sbjct: 468 FFICMAVAIVVPMFLTFFFRKSHIMTKTEDEAKLPETPVSDAPVATAPHKTMQGTVIT-- 525
Query: 496 VVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLA 555
+TSPL GEV AL + D VFA G MG+G ++P+ G +VAP D + +LFPT HAI L
Sbjct: 526 -LTSPLTGEVKALSEAVDPVFAQGVMGQGALLQPTEGVLVAPCDAEVSVLFPTKHAICLV 584
Query: 556 TDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIV 615
T +G ELL+H+GMDTV LDG+GF A V QG +VK GQ L+ FDI I EAGY TP++V
Sbjct: 585 TTEGLELLMHIGMDTVNLDGQGFEALVKQGDQVKAGQTLIQFDIAAISEAGYATETPLVV 644
Query: 616 TN 617
TN
Sbjct: 645 TN 646
>gi|71904430|ref|YP_281233.1| PTS system, trehalose-specific IIBC component [Streptococcus
pyogenes MGAS6180]
gi|71803525|gb|AAX72878.1| PTS system, trehalose-specific IIBC component [Streptococcus
pyogenes MGAS6180]
Length = 674
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 208/662 (31%), Positives = 319/662 (48%), Gaps = 68/662 (10%)
Query: 5 YTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQ 64
+ + AK ++ +GGK+NI + HC TR+RF L D +KA+ + K V GQ+Q
Sbjct: 4 FEQDAKSLLTAIGGKENIKAVTHCATRMRFVLNDNNKANVKEIEKISVVKGTFTNAGQFQ 63
Query: 65 VVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEG-NLFDRFIALVSGLFQPMLGTLSAA 123
V+IGN VP Y V+GI G A A N + + +++ +F P++ +
Sbjct: 64 VIIGNDVPVFYNDFTAVSGIEGVSKEAAKSAAKSNQNALQQVMTMLAEIFTPIIPAIIVG 123
Query: 124 GMIKGVVAIMAALGV----AKTDGAYVVLNAAGD-------------------------G 154
G+I G I+ ++ + + +V +AAGD
Sbjct: 124 GLILGFRNILESVPFEFLGQQVEKGKLVFDAAGDPVWNTIVRVSPFWSGVNHFLWLPGEA 183
Query: 155 LFQFLPLILAITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIF 214
+F FLP+ + + ++ Q +G LV P + ++ AGTP
Sbjct: 184 IFHFLPVGITWSVTRKMGTTQILGTVLGICLVSPQLLNAYAV--------AGTPAAEIAK 235
Query: 215 S-----TFFGLPIIFPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLL 269
+ FF + I Y + V+P + A + A +E ++K IP+VV + VPF +L+
Sbjct: 236 NWVWDFGFFTINRI----GYQAQVIPALLAGLSLAYLEIFWRKRIPEVVSMIFVPFLSLI 291
Query: 270 ITVPLAFLVIGPV-MSWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHW--GLV 326
+ LA V+GP+ + + + G+ L+G + GA + LV+ GLH +
Sbjct: 292 PALILAHTVLGPIGWTIGKGISFVVLAGLTGPVKWLFGAIFGALYAPLVITGLHHMTNAI 351
Query: 327 PLAILELQKGPGVILVASIAIC-FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTE 384
++ L IA+ AQ A+ +M EE+ ++S+PA ISA GVTE
Sbjct: 352 DTQLIADTATRTTGLWPMIALSNIAQGSAVFAYYLMNRHEEREAEISLPAAISAYLGVTE 411
Query: 385 PAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIH 444
PA++G+ + PF+ I + G F+V+ +G GL P F+ A N +I
Sbjct: 412 PALFGVNVKYVYPFVAGMIGSGIAGLLSTTFNVQANSIGVGGL---PGFM-AINVKYMIP 467
Query: 445 FLIAIVANFVLGFGLTQLIKIPNLFGGPSEK---------DAAESLDSEKERVSAGITEQ 495
F I +V V+ L + ++ ++ DA + K IT
Sbjct: 468 FFICMVVAIVVPMFLAFFFRKSHIMTKTEDEAKLPETPVSDAPVATAPHKTMQGTVIT-- 525
Query: 496 VVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLA 555
+TSPL GEV AL + D VFA G MG+G ++P+ G +VAP D + +LFPT HAI L
Sbjct: 526 -LTSPLTGEVKALSEAVDPVFAQGVMGQGALLQPTEGVLVAPCDAEVSVLFPTKHAICLV 584
Query: 556 TDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIV 615
T +G ELL+H+GMDTV LDG+GF A V QG +VK GQ L+ FDI I EAGY TP++V
Sbjct: 585 TTEGLELLMHIGMDTVNLDGQGFEALVKQGDQVKAGQTLIQFDIAAISEAGYATETPLVV 644
Query: 616 TN 617
TN
Sbjct: 645 TN 646
>gi|71904191|ref|YP_280994.1| PTS system, sucrose-specific IIABC component [Streptococcus
pyogenes MGAS6180]
gi|71803286|gb|AAX72639.1| PTS system, sucrose-specific IIABC component [Streptococcus
pyogenes MGAS6180]
Length = 627
Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 206/653 (31%), Positives = 325/653 (49%), Gaps = 41/653 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D ++A +++ +GG++N+ + HC TRLR + DE K D + D V GQY
Sbjct: 2 DNRQIATEVIEALGGRENVRSVAHCATRLRVMVHDEGKIDKEKAEAIDKVKGAFFNSGQY 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
Q++ G V ++Y+ V+ + + S + +GN+F R I +F P++ + A
Sbjct: 62 QMIFGTGTVNNIYDEVVALGLPTSSTSEQKAEAGKQGNIFQRAIRTFGDVFVPIIPAIVA 121
Query: 123 AGMIKGV------VAIMAALGVAKTDGAYVVLNAA-GDGLFQFLPLILAITAAKRFKMNQ 175
G+ GV AIM GV + +++ D F +LP ++A +A + F N
Sbjct: 122 TGLFMGVRGLVTQPAIMDLFGVHEYGENFLMYTRILTDTAFVYLPALVAWSAFRVFGGNP 181
Query: 176 FTALAIGFALV---YPN--IAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+ +G LV PN + AS KPL TFFG P Y
Sbjct: 182 IIGIVLGLMLVSNELPNAWVVASGGDVKPL---------------TFFGF---VPVVGYQ 223
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLV 290
TVLP GAK+EK K +P+ + + + PF T I L VIGPV +LV
Sbjct: 224 GTVLPAFFVGLVGAKLEKWLHKKVPEALDLLVTPFLTFAIMSTLGLFVIGPVFHSLENLV 283
Query: 291 GALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIAICF 349
A + + G+++G Q++V+ G+H L A L G A
Sbjct: 284 LAGTQAVLHLPFGIAGLIVGGIQQLIVVTGIHHIFNFLEAQLIANTGKDPFNAYLTAATA 343
Query: 350 AQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTG 409
AQAGA L + ++TK K++ L+ P+ +SAL G+TEPAI+G+ L F+ I GAL G
Sbjct: 344 AQAGATLAVAVKTKSTKLKGLAFPSTLSALLGITEPAIFGVNLRYPKVFVSGLIGGALGG 403
Query: 410 AYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLF 469
F + G G+ +P + N L+ +L+ ++ + FG+ +
Sbjct: 404 WVAGLFGIAGT---GFGITVLPGTLLYLNGH-LLQYLVTMLVGLGVAFGIAYTWGYQD-- 457
Query: 470 GGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEP 529
E +++ ++ + E+ + SPL G VV L D VF+SGAMG+G+AI+P
Sbjct: 458 ---RETLPLPAVEVDQTADQPALAEETLYSPLNGTVVDLAAVSDPVFSSGAMGQGLAIKP 514
Query: 530 SVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVK 589
+ +P DG + ++F T HA + + GAE+L+H+G+DTV++ G GF + V G VK
Sbjct: 515 EDNTLYSPVDGKVEIVFETGHAYAITSSQGAEVLLHIGIDTVSMAGDGFESLVAVGQAVK 574
Query: 590 KGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
KG LL FD I EAG TT +IVTN+A+Y+ +++LA+G + +G+Q+ +K
Sbjct: 575 KGDLLGHFDPSKIAEAGLDDTTMMIVTNSADYQSVDILAQGHVLIGDQVALIK 627
>gi|94991118|ref|YP_599218.1| PTS system, sucrose-specific IIABC component [Streptococcus
pyogenes MGAS10270]
gi|94544626|gb|ABF34674.1| PTS system, sucrose-specific IIABC component [Streptococcus
pyogenes MGAS10270]
Length = 627
Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 207/653 (31%), Positives = 325/653 (49%), Gaps = 41/653 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D ++A +++ +GG++N+ + HC TRLR + DE K D + D V GQY
Sbjct: 2 DNRQIAAEVIEALGGRENVRSVAHCATRLRVMVYDEGKIDKEKAEAIDKVKGAFFNSGQY 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
Q++ G V ++Y+ V+ + + S + +GN+F R I +F P++ + A
Sbjct: 62 QMIFGTGTVNNIYDEVVALGLPTSSTSEQKAEAGKQGNIFQRAIRTFGDVFVPIIPAIVA 121
Query: 123 AGMIKGV------VAIMAALGVAKTDGAYVVLNAA-GDGLFQFLPLILAITAAKRFKMNQ 175
G+ GV AIM GV + +++ D F +LP ++A +A + F N
Sbjct: 122 TGLFMGVRGLVTQPAIMDLFGVHEYGENFLMYTRILTDTAFVYLPALVAWSAFRVFGGNP 181
Query: 176 FTALAIGFALV---YPN--IAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+ +G LV PN + AS KPL TFFG P Y
Sbjct: 182 IIGIVLGLMLVSNELPNAWVVASGGDVKPL---------------TFFGF---VPVVGYQ 223
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLV 290
TVLP GAK+EK K +P+ + + + PF T I L LVIGPV +LV
Sbjct: 224 GTVLPAFFVGLVGAKLEKWLHKKVPEALDLLVTPFLTFAIMSILGLLVIGPVFHSLENLV 283
Query: 291 GALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIAICF 349
A + + G+++G Q++V+ G+H L A L G A
Sbjct: 284 LAGTQAVLHLPFGIAGLIVGGIQQLIVVTGIHHIFNFLEAQLIANTGKDPFNAYLTAATA 343
Query: 350 AQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTG 409
AQAGA L + ++TK K++ L+ P+ +SAL G+TEPAI+G+ L F+ I GAL G
Sbjct: 344 AQAGATLAVAVKTKSTKLKGLAFPSTLSALLGITEPAIFGVNLRYPKVFVSGLIGGALGG 403
Query: 410 AYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLF 469
F + G G+ +P + N L+ +L+ + + FG+ +
Sbjct: 404 WVAGLFGIAGT---GFGITVLPGTLLYLNGQ-LLQYLVTMFVGLGVAFGIAYTWGYQD-- 457
Query: 470 GGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEP 529
E +++ ++ + E+ + SPL G VV L D VF+SGAMG+G+AI+P
Sbjct: 458 ---RETLPLPAVEVDQTADQPALAEETLYSPLNGTVVDLSAVSDPVFSSGAMGQGLAIKP 514
Query: 530 SVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVK 589
+ +P DG + ++F T HA + + GAE+L+H+G+DTV++ G GF + V G VK
Sbjct: 515 EDNTLYSPVDGKVEIVFETGHAYAITSSQGAEVLLHIGIDTVSMAGDGFESLVAVGQAVK 574
Query: 590 KGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
KG LL FD I EAG TT +IVTN+A+Y+ +++LA+G + +G+Q+ +K
Sbjct: 575 KGDLLGHFDPSKIAEAGLDDTTMMIVTNSADYQSVDILAQGHVLIGDQVALIK 627
>gi|21911105|ref|NP_665373.1| putative sucrose-specific PTS permease, enzyme II [Streptococcus
pyogenes MGAS315]
gi|28895210|ref|NP_801560.1| putative sucrose-specific PTS permease, enzyme II [Streptococcus
pyogenes SSI-1]
gi|21905315|gb|AAM80176.1| putative sucrose-specific PTS permease, enzyme II [Streptococcus
pyogenes MGAS315]
gi|28810456|dbj|BAC63393.1| putative sucrose-specific PTS permease, enzyme II [Streptococcus
pyogenes SSI-1]
Length = 627
Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats.
Identities = 205/653 (31%), Positives = 325/653 (49%), Gaps = 41/653 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D ++A +++ +GG++N+ + HC TRLR + DE K D + D V GQY
Sbjct: 2 DNRQIAAEVIEALGGRENVRSVAHCATRLRVMVYDEGKIDKEKAEAIDKVKGAFFNSGQY 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
Q++ G V ++Y+ V+ + + S + +GN+F R I +F P++ + A
Sbjct: 62 QMIFGTGTVNNIYDEVVALGLPTSSTSEQKAEAGKQGNIFQRAIRTFGDVFVPIIPAIVA 121
Query: 123 AGMIKGV------VAIMAALGVAKTDGAYVVLNAA-GDGLFQFLPLILAITAAKRFKMNQ 175
G+ GV AIM GV + +++ D F +LP ++A +A + F N
Sbjct: 122 TGLFMGVRGLVTQPAIMDLFGVHEYGENFLMYTRILTDTAFVYLPALVAWSAFRVFGGNP 181
Query: 176 FTALAIGFALV---YPN--IAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+ +G LV PN + AS KPL TFFG P Y
Sbjct: 182 IIGIVLGLMLVSNELPNAWVVASGGDVKPL---------------TFFGF---IPVVGYQ 223
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLV 290
TVLP GAK+EK K +P+ + + + PF T I L VIGPV +LV
Sbjct: 224 GTVLPAFFVGLVGAKLEKWLHKKVPEALDLLVTPFLTFAIMSTLGLFVIGPVFHSLENLV 283
Query: 291 GALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIAICF 349
A + + G+++G Q++V+ G+H L A L G A
Sbjct: 284 LAGTQAVLHLPFGIAGLIVGGIQQLIVVTGIHHIFNFLEAQLIANTGKDPFNAYLTAATA 343
Query: 350 AQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTG 409
AQAGA L + ++TK K++ L+ P+ +SAL G+TEPAI+G+ L F+ I GAL G
Sbjct: 344 AQAGATLAVAIKTKSTKLKGLAFPSTLSALLGITEPAIFGVNLRYPKVFVSGLIGGALGG 403
Query: 410 AYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLF 469
F + G G+ +P + N L+ +L+ ++ + F + + +
Sbjct: 404 WVAGLFGIAGT---GFGITVLPGTLLYLNGQ-LLQYLVTMLVGLGVAFAIAYIWGYQD-- 457
Query: 470 GGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEP 529
E +++ ++ + E+ + SPL G VV L D VF+SGAMG+G+AI+P
Sbjct: 458 ---RETLPLPAVEVDQTADQPALAEETLYSPLNGTVVDLSAVSDPVFSSGAMGQGLAIKP 514
Query: 530 SVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVK 589
+ +P DG + ++F T HA + + GAE+L+H+G+DTV++ G GF + V G VK
Sbjct: 515 DDNTLYSPVDGKVEIVFETGHAYAITSSQGAEVLLHIGIDTVSMAGDGFESLVAVGQAVK 574
Query: 590 KGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
KG LL FD I EAG TT +IVTN+A+Y+ +++LA+G + +G+Q+ +K
Sbjct: 575 KGDLLGHFDPSKIAEAGLDDTTMMIVTNSADYQSVDILAQGHVLIGDQVALIK 627
>gi|154496800|ref|ZP_02035496.1| hypothetical protein BACCAP_01093 [Bacteroides capillosus ATCC
29799]
gi|150274052|gb|EDN01152.1| hypothetical protein BACCAP_01093 [Bacteroides capillosus ATCC
29799]
Length = 643
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 199/637 (31%), Positives = 315/637 (49%), Gaps = 36/637 (5%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
+Y + ++ ++GGK+NI + HC+TR+RF L D SKAD+ + V GQ+
Sbjct: 3 NYQADVQALLEYIGGKENIRAVSHCMTRMRFVLVDPSKADSAKIESIPAVKGTFTQAGQF 62
Query: 64 QVVIGNHVPDVYETVLKVAGISGEGSVDADDDAVEGN--LFDRFIALVSGLFQPMLGTLS 121
QV+IGN V Y AGI G S DA A + N L R + + +F P++ L
Sbjct: 63 QVIIGNDVAIFYNQFTAYAGIEGV-SKDAVKAAAKSNQSLIQRIVGTLGEIFAPIIPALI 121
Query: 122 AAGMIKGVVAIMAALGVAKT------------DGAYVVLNAAGDGLFQFLPLILAITAAK 169
G+I G I+ + G Y L G+ +F LP+ + + K
Sbjct: 122 CGGLILGFRNIIGEINFFADGTMSLADVSQFWSGVYDFLWLIGEAVFHLLPVGIVWSITK 181
Query: 170 RFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSY 229
+ Q + +G LV P + F+ T P++ FG + Y
Sbjct: 182 KMGTTQILGIVLGLTLVSPQLLNGFSV---------ATAETIPVWD--FGFAQV-QMIGY 229
Query: 230 LSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDL 289
V+ + A + +EK FKK P+++ + +VPF +L+ V +A V+GP+ D
Sbjct: 230 QGQVISAMLAGFVLVYLEKFFKKHCPEMISMIVVPFCSLVPAVIIAHTVVGPIGWKIGDA 289
Query: 290 VGAL-FTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAIC 348
+ A+ + G+ L+ G + +VM GLH + + G IL IA+
Sbjct: 290 IAAVVYMGLTSNVKWLFAAAFGLFYAPIVMTGLHHMTNAIDSQLVNLYDGTILWPMIALS 349
Query: 349 -FAQAGALLNI-MMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGA 406
AQ A+L + +++ K E+ +Q++IPA IS GVTEPA++G+ + P + I A
Sbjct: 350 NIAQGSAVLAMSVLQKKNERAQQVNIPACISCYLGVTEPALFGVNMKYGFPLVCGMIGSA 409
Query: 407 LTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIP 466
+ V+ +G GL I S + FL A+ A V+ F LT +I
Sbjct: 410 VAAVISISTGVEAYSIGVGGLPGILSI----KPQFWLSFLAAMAAAIVIPFVLTFIIGKR 465
Query: 467 NLFGGPSEKDAAESLDS-EKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGV 525
L + +D+A ++ + + E+ A V SP+ G ++ L+ PD VF+ G +G+GV
Sbjct: 466 KLSAAGNAQDSAPAVSAPQAEQQPAQAGSGAVKSPITGRIIPLDQIPDQVFSQGILGEGV 525
Query: 526 AIEPSVGEVVAPADG-VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQ 584
IEP+ EVVAP DG V ++ + HA G+ D+G E+LIHVGMDTV + G GF HV +
Sbjct: 526 GIEPTGTEVVAPGDGTVCSVMEDSKHACGIQLDNGVEVLIHVGMDTVEMAGDGFQLHVQE 585
Query: 585 GSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANY 621
G +V+ G L++FD + I++AG+PVTT +VT +A +
Sbjct: 586 GDRVRLGDKLITFDPEKIRKAGHPVTTAFVVTESAGH 622
>gi|94994997|ref|YP_603095.1| PTS system, sucrose-specific IIABC component [Streptococcus
pyogenes MGAS10750]
gi|94548505|gb|ABF38551.1| PTS system, sucrose-specific IIABC component [Streptococcus
pyogenes MGAS10750]
Length = 627
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 206/653 (31%), Positives = 324/653 (49%), Gaps = 41/653 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D ++A +++ +GG++N+ + HC TRLR + DE K D + D V GQY
Sbjct: 2 DNRQIATEVIEALGGRENVRSVAHCATRLRVMVYDEGKIDKEKAEAIDKVKGAFFNSGQY 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
Q++ G V ++Y+ V+ + + S + +GN+F R I +F P++ + A
Sbjct: 62 QMIFGTGTVNNIYDEVVALGLPTSSTSEQKAEAGKQGNIFQRAIRTFGDVFVPIIPAIVA 121
Query: 123 AGMIKGV------VAIMAALGVAKTDGAYVVLNAA-GDGLFQFLPLILAITAAKRFKMNQ 175
G+ GV AIM GV + +++ D F +LP ++A +A + F N
Sbjct: 122 TGLFMGVRGLVTQPAIMDLFGVHEHGENFLMYTRILTDTAFVYLPALVAWSAFRVFGGNP 181
Query: 176 FTALAIGFALV---YPN--IAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+ +G LV PN + AS KPL TFFG P Y
Sbjct: 182 IIGIVLGLMLVSNELPNAWVVASGGDVKPL---------------TFFGF---VPVVGYQ 223
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLV 290
TVLP GAK+EK K +P+ + + + PF T I L VIGPV +LV
Sbjct: 224 GTVLPAFFVGLVGAKLEKWLHKKVPEALDLLVTPFLTFAIMSILGLFVIGPVFHSLENLV 283
Query: 291 GALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIAICF 349
A + + G+++G Q++V+ G+H L A L G A
Sbjct: 284 LAGTQAVLHLPFGIAGLIVGGIQQLIVVTGIHHIFNFLEAQLIANTGKDPFNAYLTAAIA 343
Query: 350 AQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTG 409
AQAGA L + ++TK K++ L+ P+ +SAL G+TEPAI+G+ L F+ I GAL G
Sbjct: 344 AQAGATLAVAVKTKSPKLKGLAFPSTLSALLGITEPAIFGVNLRYPKVFVSGLIGGALGG 403
Query: 410 AYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLF 469
F + G G+ +P + N L+ +L+ ++ + F + +
Sbjct: 404 WVAGLFGIAGT---GFGITVLPGTLLYLNGQ-LLQYLVTMLVGLGVAFAIAYTWGYQD-- 457
Query: 470 GGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEP 529
E +++ ++ + E+ + SPL G VV L D VF+SGAMG+G+AI+P
Sbjct: 458 ---RETLPLPAVEVDQTADQPALAEETLYSPLNGTVVDLAAVSDPVFSSGAMGQGLAIKP 514
Query: 530 SVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVK 589
+ +P DG + ++F T HA + + GAE+L+H+G+DTV++ G GF + V G VK
Sbjct: 515 EDNTLYSPVDGKVEIVFETGHAYAITSSQGAEVLLHIGIDTVSMAGDGFESLVAVGQAVK 574
Query: 590 KGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
KG LL FD I EAG TT +IVTN+A+Y+ +++LA+G I +G+Q+ +K
Sbjct: 575 KGDLLGHFDPSKIAEAGLDDTTMMIVTNSADYQSVDILAQGHILIGDQVALIK 627
>gi|71911355|ref|YP_282905.1| PTS system, sucrose-specific IIABC component [Streptococcus
pyogenes MGAS5005]
gi|71854137|gb|AAZ52160.1| PTS system, sucrose-specific IIABC component [Streptococcus
pyogenes MGAS5005]
Length = 627
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 205/653 (31%), Positives = 323/653 (49%), Gaps = 41/653 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D ++A +++ +GG++N+ + HC TRLR + DE K D + D V GQY
Sbjct: 2 DNRQIAAEVIEALGGRENVRSVAHCATRLRVMVYDEGKIDKEKAEAIDKVKGAFFNSGQY 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
Q++ G V ++Y+ V+ + + S + GN+F R I +F P++ + A
Sbjct: 62 QMIFGTGTVNNIYDEVVALGLPTSSTSEQKAEAGKHGNIFQRAIRTFGDVFVPIIPAIVA 121
Query: 123 AGMIKGV------VAIMAALGVAKTDGAYVVLNAA-GDGLFQFLPLILAITAAKRFKMNQ 175
G+ GV AIM GV + +++ D F +LP ++A +A + F N
Sbjct: 122 TGLFMGVRGLVTQPAIMDLFGVHEYGENFLMYTRILTDTAFVYLPALVAWSAFRVFGGNP 181
Query: 176 FTALAIGFALV---YPN--IAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+ +G LV PN + AS KPL TFFG P Y
Sbjct: 182 IIGIVLGLMLVSNELPNAWVVASGGDVKPL---------------TFFGF---VPVVGYQ 223
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLV 290
TVLP GAK+EK K +P+ + + + PF T I L VIGPV +LV
Sbjct: 224 GTVLPAFFVGLVGAKLEKWLHKKVPEALDLLVTPFLTFAIMSTLGLFVIGPVFHSLENLV 283
Query: 291 GALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIAICF 349
A + + G+++G Q++V+ G+H L A L G A
Sbjct: 284 LAGTQAVLHLPFGIAGLIVGGIQQLIVVTGIHHIFNFLEAQLIANTGKDPFNAYLTAATA 343
Query: 350 AQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTG 409
AQAGA L + ++TK K++ L+ P+ +SAL G+TEPAI+G+ L F+ I GAL G
Sbjct: 344 AQAGATLAVAVKTKSTKLKGLAFPSTLSALLGITEPAIFGVNLRYPKVFVSGLIGGALGG 403
Query: 410 AYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLF 469
F + G G+ +P + N L+ +L+ ++ + F + +
Sbjct: 404 WVAGLFGIAGT---GFGITVLPGTLLYLNGQ-LLQYLVTMLVGLGVAFAIAYTWGYQD-- 457
Query: 470 GGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEP 529
E +++ ++ + E+ + SPL G VV L D VF+SGAMG+G+AI+P
Sbjct: 458 ---RETLPLPAVEVDQTADQPALAEETLYSPLNGTVVDLSAVSDPVFSSGAMGQGLAIKP 514
Query: 530 SVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVK 589
+ +P DG + ++F T HA + + GAE+L+H+G+DTV++ G GF + V G VK
Sbjct: 515 EDNTLYSPVDGKVEIVFETGHAYAITSSQGAEVLLHIGIDTVSMAGDGFESLVAVGQAVK 574
Query: 590 KGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
KG LL FD I EAG TT +IVTN+A+Y+ +++LA+G + +G+Q+ +K
Sbjct: 575 KGDLLGHFDPSKIAEAGLDDTTMMIVTNSADYQSVDILAQGHVLIGDQVALIK 627
>gi|94989176|ref|YP_597277.1| PTS system, sucrose-specific IIABC component [Streptococcus
pyogenes MGAS9429]
gi|94542684|gb|ABF32733.1| PTS system, sucrose-specific IIABC component [Streptococcus
pyogenes MGAS9429]
Length = 627
Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 205/653 (31%), Positives = 324/653 (49%), Gaps = 41/653 (6%)
Query: 4 DYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQY 63
D ++A +++ +GG++N+ + HC TRLR + DE K D + D V GQY
Sbjct: 2 DNRQIAAEVIEALGGRENVRSVAHCATRLRVMVYDEGKIDKEKAEAIDKVKGAFFNSGQY 61
Query: 64 QVVIGN-HVPDVYETVLKVAGISGEGSVDADDDAVEGNLFDRFIALVSGLFQPMLGTLSA 122
Q++ G V ++Y+ V+ + + S + +GN+F R I +F P++ + A
Sbjct: 62 QMIFGTGTVNNIYDEVVALGLPTSSTSEQKAEAGKQGNIFQRAIRTFGDVFVPIIPAIVA 121
Query: 123 AGMIKGV------VAIMAALGVAKTDGAYVVLNAA-GDGLFQFLPLILAITAAKRFKMNQ 175
G+ GV AIM GV + +++ D F +LP ++A +A + F N
Sbjct: 122 TGLFMGVRGLVTQPAIMDLFGVHEYGENFLMYTRILTDTAFVYLPALVAWSAFRVFGGNP 181
Query: 176 FTALAIGFALV---YPN--IAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYL 230
+ +G LV PN + AS KPL TFFG P Y
Sbjct: 182 IIGIVLGLMLVSNELPNAWVVASGGDVKPL---------------TFFGF---VPVVGYQ 223
Query: 231 STVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLV 290
TVLP GAK+EK K +P+ + + + PF T I L VIGPV +LV
Sbjct: 224 GTVLPAFFVGLVGAKLEKWLHKKVPEALDLLVTPFLTFAIMSTLGLFVIGPVFHSLENLV 283
Query: 291 GALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPL-AILELQKGPGVILVASIAICF 349
A + + G+++G Q++V+ G+H L A L G A
Sbjct: 284 LAGTQAVLHLPFGIAGLIVGGIQQLIVVTGIHHIFNFLEAQLIANTGKDPFNAYLTAATA 343
Query: 350 AQAGALLNIMMRTKEEKVRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISGALTG 409
AQAGA L + ++TK K++ L+ P+ +SAL G+TEPAI+G+ L F+ I GAL G
Sbjct: 344 AQAGATLAVAVKTKSTKLKGLAFPSTLSALLGITEPAIFGVNLRYPKVFVSGLIGGALGG 403
Query: 410 AYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLF 469
F + G G+ +P + N L+ +L+ ++ + F + +
Sbjct: 404 WVAGLFGIAGT---GFGITVLPGTLLYLNGQ-LLQYLVTMLVGLGVAFAIAYTWGYQD-- 457
Query: 470 GGPSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEP 529
E +++ ++ + E+ + SPL G VV L D VF+SGAMG+G+AI+P
Sbjct: 458 ---RETLPLPAVEVDQTADQPALAEETLYSPLNGTVVDLAAVSDPVFSSGAMGQGLAIKP 514
Query: 530 SVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVK 589
+ +P DG + ++F T HA + + GAE+L+H+G+DTV++ G GF + V G VK
Sbjct: 515 EDNTLYSPVDGKVEIVFETGHAYAITSSQGAEVLLHIGIDTVSMAGDGFESLVAVGQAVK 574
Query: 590 KGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLLELK 642
KG LL FD I EAG TT +IVTN+A+Y+ +++LA+G + +G+Q+ +K
Sbjct: 575 KGDLLGHFDPSKIAEAGLDDTTMMIVTNSADYQSVDILAQGHVLIGDQVALIK 627
>gi|116511978|ref|YP_809194.1| sucrose-specific PTS system IIBC component [Lactococcus lactis
subsp. cremoris SK11]
gi|116107632|gb|ABJ72772.1| sucrose-specific PTS system IIBC component [Lactococcus lactis
subsp. cremoris SK11]
Length = 645
Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats.
Identities = 214/671 (31%), Positives = 337/671 (50%), Gaps = 71/671 (10%)
Query: 8 LAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQYQVVI 67
+A++I +VGG N+ KL+HC+TR+R ++ D+SK + L DGV+ VV+ QVVI
Sbjct: 9 IAREIYENVGGTQNVKKLIHCMTRVRMTIIDDSKVNLAGLKAIDGVMGVVE-DETLQVVI 67
Query: 68 G-NHVPDVYETVLKVAGIS-GEGSVDADDDAVEGNL----------------FDRFIALV 109
G V V + ++ G+ GE +A+ +++ + F + +
Sbjct: 68 GPGTVNKVAQAMVDTVGVRLGEAFPNAEGQSIDDLMAKTKSEAKEKYNKPSKFKAVLNTI 127
Query: 110 SGLFQPMLGTLSAAGMIKGVVAIMAALGVAKTDGAYV-VLNAAGDGLFQFLPLILAITAA 168
S +F P++ AG+I G+ + A A T ++ VL G+F +L + + I +A
Sbjct: 128 SKIFVPLIPAFVGAGLIGGLDLVTAGTLDAATWTQFITVLKIIQSGIFSYLAIYVGINSA 187
Query: 169 KRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASS 228
+ F A+G + ++ E PL +F G+ + S+
Sbjct: 188 QEFGATP----ALGGVIGAVSLLTGMNPELPLKNIFNGSAL-----------------SA 226
Query: 229 YLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMS-WAS 287
++ VI AVW + +EK +K IPD + + + P LL+ I P+ +S
Sbjct: 227 GQGGIIGVIFAVWLLSILEKQLRKFIPDSIDIIVTPTIGLLVIGFAEIFAIMPIAGVISS 286
Query: 288 DLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGVILVASIAI 347
LVGA+ I + G VLG + +VMFGLH L P+ + + K L+ +A+
Sbjct: 287 SLVGAI-NFILQVGGGISGFVLGVLFLPMVMFGLHQILTPIHLEMIAKTGSTQLLPILAM 345
Query: 348 CFA-QAGALLNIMMRTKEEK-VRQLSIPAFISALFGVTEPAIYGITLPMRLPFIMTCISG 405
A Q GA + + +R +++K +L A + G+ EP IYGITLP+ PFI CI G
Sbjct: 346 AGAGQVGAAIALWLRLRKDKEFVELVKGALPVGILGIGEPLIYGITLPLGRPFITACIGG 405
Query: 406 ALTGAYLAFFDVKMQV-MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIK 464
+ GA + + +G GL +P + L+ L A V F+ +
Sbjct: 406 GIGGAIIGSLGQAGAIAIGPSGLALLPLIANGKWWVYLLGLLGAYVGGFIATY------- 458
Query: 465 IPNLFGGPSEKDAAESLDSEKERV-------------SAGITEQVVTSPLAGEVVALEDT 511
LFG P KDA E D+ + V + + V++SPL G V L
Sbjct: 459 ---LFGIP--KDAKEKADNYGKSVQMETLQPTLRVVTTPEFSSSVISSPLDGNVKELSSI 513
Query: 512 PDAVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTV 571
D VF+SG +GKGVAIEP+ GE+V+P +GV+ +FPT HAIGL +D+G E+LIH+GMDTV
Sbjct: 514 EDEVFSSGMLGKGVAIEPTNGEIVSPVNGVVSTVFPTKHAIGLTSDEGVEILIHIGMDTV 573
Query: 572 ALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGE 631
AL+G+GF + V Q +V+KG LL+ D + IKEAG TP+++TN+ Y++I +
Sbjct: 574 ALNGEGFESFVKQNDRVRKGDLLVRADFEKIKEAGLSTITPVVITNSDTYREIIITHGAT 633
Query: 632 IQLGNQLLELK 642
I G ++ +K
Sbjct: 634 ISKGQEIFTVK 644
>gi|154505191|ref|ZP_02041929.1| hypothetical protein RUMGNA_02704 [Ruminococcus gnavus ATCC 29149]
gi|153794670|gb|EDN77090.1| hypothetical protein RUMGNA_02704 [Ruminococcus gnavus ATCC 29149]
Length = 443
Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats.
Identities = 168/468 (35%), Positives = 263/468 (56%), Gaps = 37/468 (7%)
Query: 178 ALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVI 237
A+ + AL+YP+ A+++A + L TF +P++ SY S+V+P++
Sbjct: 2 AVGVAAALLYPDRTAAYSAGEAL---------------TFLKIPVVL--VSYTSSVIPIV 44
Query: 238 AAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGI 297
+V+A +K+EKG KKI+P V K F+ P +L I VP +LVIGP+ + + +TG+
Sbjct: 45 ISVYALSKLEKGLKKIVPTVCKTFLTPLLSLAIMVPATYLVIGPIADTVGKALASGYTGL 104
Query: 298 YDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILEL-QKGPGVILVASIAICFAQAGALL 356
+PV+ G +LG W VMFG+HWG VP+ + + + G + + AQAGA L
Sbjct: 105 VGLNPVIAGGLLGLIWPAAVMFGVHWGFVPIVMNNIAEYGRDTLFTITGPNNMAQAGATL 164
Query: 357 NIMMRTKEEKVRQLSIPAFISA-LFGVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFF 415
+ ++TK++ V++L+ PA +SA L G+TEPAIYG+TL + PF + + + GA +A
Sbjct: 165 GVFLKTKDKSVKELAGPAALSAVLAGITEPAIYGVTLRFKRPFFIGAVFSGIAGAIVAAA 224
Query: 416 DVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAI----VANFVLGFGLTQLIKIPNLFGG 471
+ G + +P +I LI IA + + G+ L K
Sbjct: 225 GTGAPTLLGTSILTLPGYIGVGFVGFLIACAIAYFGSAIVTYFFGYSDDMLPKKEEKKEE 284
Query: 472 PSEKDAAESLDSEKERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSV 531
P E A+ ++ + +P++G+V+ L + D FA G +G+G A+ P
Sbjct: 285 PQEIIPAK--------------DEALLAPVSGKVIPLSEVRDEAFAGGILGQGAAVIPEN 330
Query: 532 GEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKG 591
GE+ AP DGVI +++PT HA+G+ +D GAE+LIHVGMDTV L+G F V G VK G
Sbjct: 331 GEICAPCDGVISVMYPTGHAVGIKSDIGAEILIHVGMDTVTLNGSCFAVKVKAGDYVKAG 390
Query: 592 QLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQLGNQLL 639
QLL+ +I+ IK+ G +TTP+IV NTA+Y QI+ +A+ ++ G LL
Sbjct: 391 QLLVRANIEGIKKEGLDITTPVIVANTADYMQIKTVAEESVKSGEVLL 438
>gi|38233741|ref|NP_939508.1| PTS system, glucose-specific IIABC component [Corynebacterium
diphtheriae NCTC 13129]
gi|38200002|emb|CAE49671.1| PTS system, glucose-specific IIABC component [Corynebacterium
diphtheriae]
Length = 676
Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 203/668 (30%), Positives = 330/668 (49%), Gaps = 68/668 (10%)
Query: 7 ELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQ-YQV 65
+ A+ I+ +GG NIT HC TRLRF L D SK D L V+ V GG+ YQV
Sbjct: 8 DTARAILDGIGGASNITSFTHCATRLRFELADASKVDKAALDSIPKVMGAVPQGGRNYQV 67
Query: 66 VIGNHVPDVYETVLKVAGISGEGSVDADDDAV-----EGNL--FDRFIALVSGLFQPMLG 118
VIG V +VY+ + + + DAD A +G L D F +S F+P+LG
Sbjct: 68 VIGGDVANVYDDMTHLPEMKSAAPSDADIKAAARAKSKGKLPWMDSFFEYLSDSFRPILG 127
Query: 119 TLSAAGMIKGVVAIMAALGVAK-----TDGAYVVLNAAGDGLFQFLPLILAITAAKRFKM 173
L A +I A++ A + ++V ++A +F FLP+++A A K+ ++
Sbjct: 128 VLLGASLIIAFTAVLDAFHIVDFRADDKSASWVFVDAMWRSVFYFLPVMVAFNAGKKLRI 187
Query: 174 NQFTALAIGFALVYPN---IAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFP---AS 227
+ + AI FAL P + S TAE +PIF G+ + FP +
Sbjct: 188 DPWVPAAIMFALFTPEFLGLKESSTAECVTNAALGTETCHAPIF----GINMTFPDYGGN 243
Query: 228 SYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWAS 287
++ ++ +AAV + KGF+K+IP V + VPF TL+I +P+ +IGP +WA
Sbjct: 244 VFVPLIMAAVAAV-----VYKGFQKVIPTAVHMVFVPFLTLVIMIPVTAFIIGPFGTWAG 298
Query: 288 DLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-------KGP-GV 339
+ +G + + + +P ++ + + + LV GLHW L L ++ +Q +GP G
Sbjct: 299 NGIGLGLSWMNENAPFVFALAIPLLYPFLVPLGLHWPLNALMLINIQTLGYDFIQGPMGT 358
Query: 340 ILVASIAICFAQAGALLNIMMRTKEEKVRQLSIPAFISALFG-VTEPAIYGITLPMRLPF 398
A CF +L + +R K+ +RQ + A + L G ++EP++YGI L + +
Sbjct: 359 WNFA----CFGATAGVLALSIRDKDTVMRQTAGSALAAGLLGGISEPSLYGIHLRFKRVY 414
Query: 399 ---IMTCISGALTGAYLA--FFDVKMQVMGGMGLFAIPSFIEASNSMT--LIHFLIAIVA 451
+ C +G LT A L+ F V + + F A M L+ F +A +A
Sbjct: 415 PRMLAGCFAGGLTIAVLSTIFEPVTTNAFVFTSIPTMFVFNPAWIYMVSILVAFTVAFLA 474
Query: 452 NFVLGFGLTQLIKIPNLFGGPSEKDAAESLDSEK----------ERVSAGITEQVVTSPL 501
F+ + T+ + F + +D+A+ + + + E V SP+
Sbjct: 475 IFITDYRTTE--EKAEFF---ARRDSADDVPAATVPSATTPAPAAAAANPAGECKVGSPI 529
Query: 502 AGEVVALEDTPDAVFASGAMGKGVAIEPSVG-----EVVAPADGVIRLLFPTNHAIGLAT 556
+GEV+ + + D VF++G +G GV + P+ EV +P G ++ + HA G+ T
Sbjct: 530 SGEVLPMAEIADPVFSAGTLGDGVGVNPTATAGAGTEVYSPVSGTVKSAMKSGHAYGIKT 589
Query: 557 DDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVT 616
DDG E+L+H+G+DTV + G+GFT V +G +V+ GQ L + D D ++ AGY T + VT
Sbjct: 590 DDGVEVLVHIGIDTVQMKGEGFTPAVQKGDRVEAGQKLATVDYDKVRAAGYGTTIVVAVT 649
Query: 617 NTANYKQI 624
NT K +
Sbjct: 650 NTKAMKAV 657
>gi|3098512|gb|AAC27701.1| glucose permease [Corynebacterium ammoniagenes]
Length = 661
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 216/670 (32%), Positives = 327/670 (48%), Gaps = 53/670 (7%)
Query: 9 AKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAGGQ-YQVVI 67
A++I+A +GG DNI HC TRLRF L D KAD D L V+ V GG+ YQVVI
Sbjct: 10 AEEILAGIGGADNIASFTHCATRLRFELNDAFKADKDKLDAIPKVMGAVPQGGRNYQVVI 69
Query: 68 GNHVPDVYETVLKVAGI-SGEGSVDADDDA-VEGNL--FDRFIALVSGLFQPMLGTLSAA 123
G V VY ++++ G+ + V A A +G + D +S F+P+LG L A
Sbjct: 70 GGDVASVYNEMVQLPGVRKSDADVKAASRAKTQGKMPWLDTAFEYLSDSFRPILGVLLGA 129
Query: 124 GMIKGVVAIMAALGVAKTDG-----AYVVLNAAGDGLFQFLPLILAITAAKRFKMNQFTA 178
+I A+M A GV T + ++A +F FLP+++A A + +++ +
Sbjct: 130 SLIIAFTAVMEAFGVVDTRADDKAAIWFFIDAMWRSVFYFLPVMVAYNAGNKLRIDPWVP 189
Query: 179 LAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFST-FFGLPIIFPASSYLSTV-LPV 236
A+ AL P E P+ + + S G+ + P Y V +P+
Sbjct: 190 AAVMLALFTPEFLG--LKENPVANCVVDEALGTETCSIDLLGINVALP--DYGGNVFVPL 245
Query: 237 IAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTG 296
I A+ A A I KGF+KIIP V + VPF TLL T+P+ ++IGP W +G
Sbjct: 246 IMALVA-AGIYKGFQKIIPSAVHMVFVPFLTLLFTIPITAVLIGPFGVWLGSTIGVGLAW 304
Query: 297 IYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-------KGPGVILVASIAICF 349
+ +P ++ I++ + LV GLHW L L ++ ++ +GP + A CF
Sbjct: 305 MNGNAPFVFAILIPMLYPFLVPLGLHWPLNALMLVNIEALGYDFIQGP---MGAWNFACF 361
Query: 350 AQAGALLNIMMRTKEEKVRQLSIPAFISALFG-VTEPAIYGITLPMRLPF---IMTCISG 405
A+L I MR K+ ++RQ S A + LFG ++EP++YGI L + + ++ C +G
Sbjct: 362 GATAAVLAISMREKDPEMRQTSGSALAAGLFGGISEPSLYGIHLRFKRIYPRMLVGCFAG 421
Query: 406 ALTGAYL--AFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLI 463
LT A L A V L IP F S +T + A L T
Sbjct: 422 GLTIAILGTASGGVTTNAFVFTSLLTIPVF---SPMLTYTIAVAVAFAVAFLLIYFTD-- 476
Query: 464 KIPNLFGGPSEKDAAESLDSEKERVSAGITEQV----------VTSPLAGEVVALEDTPD 513
+ EK+A+ +E V +G + + SP+ G V LE+ D
Sbjct: 477 -----YRTAEEKEASRERAAEAGLVPSGTNPETEASTTTETADLVSPVDGMAVKLENIDD 531
Query: 514 AVFASGAMGKGVAIEPSVGEVVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVAL 573
VFASG +G G+ I P G + +P G I + T HA G+ TDDG E+L+H+G++TV +
Sbjct: 532 KVFASGTLGNGIGIVPVNGNIQSPVAGTIATVTKTGHAFGIKTDDGVEVLVHIGINTVRM 591
Query: 574 DGKGFTAHVVQGSKVKKGQLLLSFDIDTIKEAGYPVTTPIIVTNTANYKQIEVLAKGEIQ 633
G+GF V +G V G L D+D IKEAGY T + VTNT ++ +A+G ++
Sbjct: 592 KGEGFEPKVAKGDVVSIGTPLAEVDLDKIKEAGYDNTVVVTVTNTKAMGEVASIAEGAVK 651
Query: 634 LGNQLLELKK 643
G ++ +K+
Sbjct: 652 AGEAVVAIKR 661
>gi|82393807|gb|ABB72199.1| glucose permease [Brevibacterium flavum]
Length = 675
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 205/684 (29%), Positives = 330/684 (48%), Gaps = 89/684 (13%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MA T ++ I+ ++GG DNIT + HC TRLRF +KD+S D + V+ VV G
Sbjct: 1 MASKLTTTSQHILENLGGPDNITSMTHCATRLRFQVKDQSIVDQQEIDSDPSVLGVVPQG 60
Query: 61 GQ-YQVVIGNHVPDVYETVLKVAGI-------SGEGSVDADDDAVEG--NLFDRFIALVS 110
QVV+G V + Y+ +LK+ G+ + E S + V G + D +S
Sbjct: 61 STGMQVVMGGSVANYYQEILKLDGMQHFADGEATESSSKKEYGGVRGKYSWIDYAFEFLS 120
Query: 111 GLFQPMLGTLSAAGMIKGVVAIMAALGVA-------KTDGAYVVLNAAGDGLFQFLPLIL 163
F+P+L L A +I ++ + G+ + YV L++ +F FLP+++
Sbjct: 121 DTFRPILWALLGASLIITLLVLADTFGLQDFRAPMDEQPDTYVFLHSMWRSVFYFLPIMV 180
Query: 164 AITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPII 223
TAA++ N++ AI AL+ P A +A + T FG+P++
Sbjct: 181 GATAARKLGANEWIGAAIPAALLTPEFLALGSAGDTV---------------TVFGIPMV 225
Query: 224 FPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVM 283
+ Y + P + A +EKG KKIIP+ V++ VPFF+LLI +P ++GP
Sbjct: 226 L--NDYSGQLFPPLIAAIGLYWVEKGLKKIIPEAVQMVFVPFFSLLIMIPATAFLLGPFG 283
Query: 284 SWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-------KG 336
+ + L I +FSP + IV+ + LV GLHW L + I + +G
Sbjct: 284 IGVGNGISNLLEAINNFSPFILSIVIPLLYPFLVPLGLHWPLNAIMIQNINTLGYDFIQG 343
Query: 337 PGVILVASIAICFAQAGALLNIMMRTKEEKVRQLS-IPAFISALFGVTEPAIYGITLPMR 395
P + A CF + + ++ + + +RQ+S L G++EP++YG+ L +
Sbjct: 344 P---MGAWNFACFGLVTGVFLLSIKERNKAMRQVSLGGMLAGLLGGISEPSLYGVLLRFK 400
Query: 396 LPF---IMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAI-VA 451
+ + C++GA+ + FD+K L IP+ + + I I VA
Sbjct: 401 KTYFRLLPGCLAGAIV---MGIFDIKAYAFVFTSLLTIPAM------DPWLGYTIGIAVA 451
Query: 452 NFVLGFGLTQLIKIPN------LFGGPSEKDAAESLDSE--------------------- 484
FV F + L N ++K A E L +E
Sbjct: 452 FFVSMFLVLALDYRSNEERDEARAKVAADKQAEEDLKAEANAIPAGAGAGAGAAAGAATA 511
Query: 485 ---KERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADGV 541
K R++AG + +TSP + + L + PD +FA+G +G G+AI+P+ VVAPAD
Sbjct: 512 VAAKPRLAAGQLVE-ITSPSKAKAIPLSEVPDPIFAAGKLGPGIAIQPTGNTVVAPADAT 570
Query: 542 IRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDIDT 601
+ L+ + HA+ L D G E+L+HVG+DTV L G+GFT HV + +VK G L++FD D
Sbjct: 571 VILVQKSGHAVALRLDSGVEILVHVGLDTVQLGGEGFTVHVERRQQVKAGDPLITFDADF 630
Query: 602 IKEAGYPVTTPIIVTNTANYKQIE 625
I+ P+ TP++V+N A + +IE
Sbjct: 631 IRSKDLPLITPVVVSNAAKFGEIE 654
>gi|76798556|ref|ZP_00780788.1| beta-glucoside permease IIABC component [Streptococcus agalactiae
18RS21]
gi|76586090|gb|EAO62616.1| beta-glucoside permease IIABC component [Streptococcus agalactiae
18RS21]
Length = 501
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 178/509 (34%), Positives = 278/509 (54%), Gaps = 28/509 (5%)
Query: 125 MIKGVVAIMAALGVAKTDGAYVV-LNAAGDGLFQFLPLILAITAAKRFKMNQFTALAIGF 183
M+K + ++ LG+A + V +N GD + F+P+++A +AA RFK+ A +G
Sbjct: 1 MLKVIGILLPMLGIASSSSQTVAFINFFGDAAYYFMPIMIAYSAASRFKVTPVLAATVGG 60
Query: 184 ALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPIIFPASSYLSTVLPVIAAVWAG 243
L++P KPL + FG P+ +SY S+V+P++ V+
Sbjct: 61 ILLHPAFVTMVAEGKPL---------------SLFGAPVTL--ASYGSSVIPILIMVFLM 103
Query: 244 AKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVMSWASDLVGALFTGIYDFSPV 303
IE+ KI+P V+K F+ P +LI+ LA +V+GP+ + + IY +P
Sbjct: 104 QYIERWINKIVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGKGLSSAMLSIYHVAPW 163
Query: 304 LYGIVLGAAWQVLVMFGLHWGLVPLAILELQKGPGV-ILVASIAICFAQAGALLNIMMRT 362
L +LGA ++VM G+HW P+ + P V IL A +A AQ A L + ++
Sbjct: 164 LALSILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAVKA 223
Query: 363 KEEKVRQLSIPAFISALF-GVTEPAIYGITLPMRLPFIMTCISGALTGAYLAFFDVKMQV 421
K+++ RQ++ A +SAL G+TEPA+YG+TL + P ISG L GAY+ ++
Sbjct: 224 KQKQTRQVAFAAGLSALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAYIGLVNIASYT 283
Query: 422 MGGMGLFAIPSFIEASNSMTLIHFLIAIVANFVLGFGLTQLIKIPNLFGGPSEKDAAESL 481
+ +P +I + +IA +A +L F +T + I G +EK + +
Sbjct: 284 FVVPSIIGLPQYINPQGGNNFSNAVIAAIATIILTFIITWFLGIDE---GENEKSSINA- 339
Query: 482 DSEKERVSAGITE-QVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGEVVAPADG 540
E + +G+++ + + SP+ G V+ L PD F+S +G+G+AI PSVGEV AP DG
Sbjct: 340 -QEHTHIRSGLSKKETLYSPMVGNVLPLSKVPDETFSSKLLGEGLAITPSVGEVYAPFDG 398
Query: 541 VIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQLLLSFDID 600
I LFPT HAI L D G E+LIH+G+DTV L+G+GF V G VK+GQLLL DID
Sbjct: 399 EIISLFPTKHAIALKDDKGVEVLIHIGIDTVELNGEGFEQLVKVGDFVKRGQLLLRMDID 458
Query: 601 TIKEAGYPVTTPIIVTNTANYKQIEVLAK 629
I GY + +P++VTN+ + Q+E++ K
Sbjct: 459 FISSKGYSLISPVVVTNSID--QLEIIVK 485
>gi|19552574|ref|NP_600576.1| phosphotransferase system IIC component,
glucose/maltose/N-acetylglucosamine-specific
[Corynebacterium glutamicum ATCC 13032]
gi|62390243|ref|YP_225645.1| GLUCOSE-SPECIFIC ENZYME II BC COMPONENT OF PTS [Corynebacterium
glutamicum ATCC 13032]
gi|22001842|sp|Q46072|PTN3B_CORGL PTS system mannose-specific EIIBCA component (EIIBCA-Man)
(EII-Man/EIII-Man) [Includes: Mannose-specific
phosphotransferase enzyme IIB component (PTS system
mannose-specific EIIB component); Mannose permease IIC
component (PTS system mannose-specific EIIC component);
Mannose-specific phosphotransferase enzyme IIA component
(PTS system mannose-specific EIIA component)]
gi|405150|gb|AAA53546.1| phosphoenolpyruvate sugar phosphotransferase
gi|21324128|dbj|BAB98753.1| Phosphotransferase system IIC components,
glucose/maltose/N-acetylglucosamine-specific
[Corynebacterium glutamicum ATCC 13032]
gi|41325580|emb|CAF21369.1| GLUCOSE-SPECIFIC ENZYME II BC COMPONENT OF PTS [Corynebacterium
glutamicum ATCC 13032]
gi|744234|prf||2014259A phosphoenolpyruvate sugar phosphotransferase
Length = 683
Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats.
Identities = 208/692 (30%), Positives = 330/692 (47%), Gaps = 97/692 (14%)
Query: 1 MAKDYTELAKDIVAHVGGKDNITKLVHCVTRLRFSLKDESKADTDYLMKRDGVVTVVKAG 60
MA T ++ I+ ++GG DNIT + HC TRLRF +KD+S D + V+ VV G
Sbjct: 1 MASKLTTTSQHILENLGGPDNITSMTHCATRLRFQVKDQSIVDQQEIDSDPSVLGVVPQG 60
Query: 61 GQ-YQVVIGNHVPDVYETVLKVAGI-------SGEGSVDADDDAVEG--NLFDRFIALVS 110
QVV+G V + Y+ +LK+ G+ + E S + V G + D +S
Sbjct: 61 STGMQVVMGGSVANYYQEILKLDGMKHFADGEATESSSKKEYGGVRGKYSWIDYAFEFLS 120
Query: 111 GLFQPMLGTLSAAGMIKGVVAIMAALGVA-------KTDGAYVVLNAAGDGLFQFLPLIL 163
F+P+L L A +I ++ + G+ + YV L++ +F FLP+++
Sbjct: 121 DTFRPILWALLGASLIITLLVLADTFGLQDFRAPMDEQPDTYVFLHSMWRSVFYFLPIMV 180
Query: 164 AITAAKRFKMNQFTALAIGFALVYPNIAASFTAEKPLYTLFAGTPIESPIFSTFFGLPII 223
TAA++ N++ AI AL+ P A +A + T FGLP++
Sbjct: 181 GATAARKLGANEWIGAAIPAALLTPEFLALGSAGDTV---------------TVFGLPMV 225
Query: 224 FPASSYLSTVLPVIAAVWAGAKIEKGFKKIIPDVVKVFIVPFFTLLITVPLAFLVIGPVM 283
+ Y V P + A +EKG KKIIP+ V++ VPFF+LLI +P ++GP
Sbjct: 226 L--NDYSGQVFPPLIAAIGLYWVEKGLKKIIPEAVQMVFVPFFSLLIMIPATAFLLGPFG 283
Query: 284 SWASDLVGALFTGIYDFSPVLYGIVLGAAWQVLVMFGLHWGLVPLAILELQ-------KG 336
+ + L I +FSP + IV+ + LV GLHW L + I + +G
Sbjct: 284 IGVGNGISNLLEAINNFSPFILSIVIPLLYPFLVPLGLHWPLNAIMIQNINTLGYDFIQG 343
Query: 337 PGVILVASIAICFAQAGALLNIMMRTKEEKVRQLS-IPAFISALFGVTEPAIYGITLPMR 395
P + A CF + + ++ + + +RQ+S L G++EP++YG+ L +
Sbjct: 344 P---MGAWNFACFGLVTGVFLLSIKERNKAMRQVSLGGMLAGLLGGISEPSLYGVLLRFK 400
Query: 396 LPF---IMTCISGALTGAYLAFFDVKMQVMGGMGLFAIPSFIEASNSMTLIHFLIAI-VA 451
+ + C++G G + FD+K L IP+ + + I I VA
Sbjct: 401 KTYFRLLPGCLAG---GIVMGIFDIKAYAFVFTSLLTIPAM------DPWLGYTIGIAVA 451
Query: 452 NFVLGFGLTQLIKIPN------LFGGPSEKDAAESLDSE--------------------- 484
FV F + L N ++K A E L +E
Sbjct: 452 FFVSMFLVLALDYRSNEERDEARAKVAADKQAEEDLKAEANATPAAPVAAAGAGAGAGAG 511
Query: 485 -----------KERVSAGITEQVVTSPLAGEVVALEDTPDAVFASGAMGKGVAIEPSVGE 533
K +++AG +V SPL G+ + L + PD +FA+G +G G+AI+P+
Sbjct: 512 AAAGAATAVAAKPKLAAGEVVDIV-SPLEGKAIPLSEVPDPIFAAGKLGPGIAIQPTGNT 570
Query: 534 VVAPADGVIRLLFPTNHAIGLATDDGAELLIHVGMDTVALDGKGFTAHVVQGSKVKKGQL 593
VVAPAD + L+ + HA+ L D G E+L+HVG+DTV L G+GFT HV + +VK G
Sbjct: 571 VVAPADATVILVQKSGHAVALRLDSGVEILVHVGLDTVQLGGEGFTVHVERRQQVKAGDP 630
Query: 594 LLSFDIDTIKEAGYPVTTPIIVTNTANYKQIE 625
L++FD D I+ P+ TP++V+N A + +IE
Sbjct: 631 LITFDADFIRSKDLPLITPVVVSNAAKFGEIE 662
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.323 0.140 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,318,694,253
Number of Sequences: 5470121
Number of extensions: 103179747
Number of successful extensions: 293248
Number of sequences better than 1.0e-05: 500
Number of HSP's better than 0.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 288449
Number of HSP's gapped (non-prelim): 1627
length of query: 643
length of database: 1,894,087,724
effective HSP length: 139
effective length of query: 504
effective length of database: 1,133,740,905
effective search space: 571405416120
effective search space used: 571405416120
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 133 (55.8 bits)