R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|12321918|gb|AAG50997.1|AC036106_10 (AC036106) ATP citrate lyase, putative;
38389-41775 [Arabidopsis thaliana]
>gi|12322674|gb|AAG51326.1|AC020580_6 (AC020580) ATP citrate lyase,
putative; 3734-7120 [Arabidopsis thaliana]
Length = 608
Frame 3 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | || 608
0 150 300 450 600
Plus Strand HSPs:
Score = 539 (189.7 bits), Expect = 5.7e-51, P = 5.7e-51
Identities = 104/109 (95%), Positives = 109/109 (100%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
VELLQKFAR++FP+VKYMEYAVQVETYTL+KANNLVLNVDGAIGSLFLDLLAGSGMFTKQ
Sbjct: 500 VELLQKFARSNFPAVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 559
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYTK 329
EIDEIV+IGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYTK
Sbjct: 560 EIDEIVQIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYTK 608
>gi|9759429|dbj|BAB09916.1| (AB023034) ATP citrate lyase [Arabidopsis thaliana]
Length = 608
Frame 3 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | || 608
0 150 300 450 600
Plus Strand HSPs:
Score = 536 (188.7 bits), Expect = 1.2e-50, P = 1.2e-50
Identities = 104/109 (95%), Positives = 108/109 (99%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
VELLQKFAR++FPSVKYMEYAV VETYTL+KANNLVLNVDGAIGSLFLDLLAGSGMFTKQ
Sbjct: 500 VELLQKFARSNFPSVKYMEYAVTVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 559
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYTK 329
EIDEIV+IGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYTK
Sbjct: 560 EIDEIVQIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYTK 608
>gi|4775300|emb|CAB42597.1| (AJ238633) putative ATP-dependent citrate lyase
[Chlorella protothecoides]
Length = 242
Frame 3 hits (HSPs): ____________ ___________
__________________________________________________
Database sequence: | | | | | | 242
0 50 100 150 200
Plus Strand HSPs:
Score = 229 (80.6 bits), Expect = 4.1e-38, Sum P(2) = 4.1e-38
Identities = 43/52 (82%), Positives = 46/52 (88%), Frame = +3
Query: 174 TKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYTK 329
TK EID IV+IGYLNGLFVLAR+IGLIGH DQKRL QPLYRHPW+DVLY K
Sbjct: 191 TKVEIDSIVKIGYLNGLFVLARTIGLIGHCLDQKRLGQPLYRHPWDDVLYAK 242
Score = 205 (72.2 bits), Expect = 4.1e-38, Sum P(2) = 4.1e-38
Identities = 41/55 (74%), Positives = 48/55 (87%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSG 167
VELLQ++ARTHFPS +Y++YAV+VE YTL KA NLVLNVDG IG+LFLDLL SG
Sbjct: 100 VELLQRYARTHFPSTRYLDYAVEVEGYTLQKAANLVLNVDGCIGALFLDLL-NSG 153
>gi|5304837|emb|CAB46077.1| (AJ243483) ATP citrate lyase [Cyanophora paradoxa]
Length = 641
Frame 3 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 641
0 150 300 450 600
Plus Strand HSPs:
Score = 387 (136.2 bits), Expect = 2.5e-34, P = 2.5e-34
Identities = 69/109 (63%), Positives = 87/109 (79%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
V+LL ++A HFP+ KY+ +A VE YTLTK+NNL+LNVDG IG+LF D L S FT +
Sbjct: 504 VQLLSEYADRHFPTTKYLNFAKSVEAYTLTKSNNLILNVDGCIGALFCDFLVSSQCFTDE 563
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYTK 329
EI E+++IG +NGLFV AR+IGLIGH DQKRLKQPLYRHPW+D+LY +
Sbjct: 564 EIQEVLDIGTMNGLFVQARTIGLIGHALDQKRLKQPLYRHPWDDILYAE 612
>gi|11427238 ref|XP_008565.1| ATP citrate lyase [Homo sapiens]
Length = 261
Frame 3 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | | 261
0 50 100 150 200 250
Plus Strand HSPs:
Score = 335 (117.9 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 59/107 (55%), Positives = 80/107 (74%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
V++L+ + R HFP+ ++YA++VE T +K NL+LNVDG IG F+D+L G FT++
Sbjct: 147 VQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIGVAFVDMLRNCGSFTRE 206
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 323
E DE ++IG LNG+FVL RS+G IGH DQKRLKQ LYRHPW+D+ Y
Sbjct: 207 EADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 253
>gi|11359227|pir||T42753 probable ATP citrate (pro-S)-lyase (EC 4.1.3.8) -
fission yeast (Schizosaccharomyces pombe) (fragment)
>gi|1749596|dbj|BAA13855.1| (D89194) similar to Rat ATP
citrate-lyase, SWISS-PROT Accession Number P16638
[Schizosaccharomyces pombe]
Length = 323
Frame 3 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | | | | 323
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 330 (116.2 bits), Expect = 8.0e-29, P = 8.0e-29
Identities = 60/107 (56%), Positives = 79/107 (73%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
VEL++ + + +FPS K ++YA+ VE T +K +NL+LNVDG I F+DLL G FT +
Sbjct: 215 VELVKGYVKKNFPSTKLLDYALAVENVTTSKKDNLILNVDGCIAVCFVDLLRNCGAFTLE 274
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 323
E +E + +G LNG+FVL RSIGLIGH DQKRL+ PLYRHPW+D LY
Sbjct: 275 EANEYINLGILNGMFVLGRSIGLIGHHLDQKRLRAPLYRHPWDDFLY 321
>gi|11359228|pir||T50320 probable ATP citrate lyase [imported] - fission yeast
(Schizosaccharomyces pombe) >gi|6723921|emb|CAB66451.1| (AL136536)
probable ATP citrate lyase [Schizosaccharomyces pombe]
Length = 615
Frame 3 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 615
0 150 300 450 600
Plus Strand HSPs:
Score = 330 (116.2 bits), Expect = 4.0e-28, P = 4.0e-28
Identities = 60/107 (56%), Positives = 79/107 (73%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
VEL++ + + +FPS K ++YA+ VE T +K +NL+LNVDG I F+DLL G FT +
Sbjct: 507 VELVKGYVKKNFPSTKLLDYALAVENVTTSKKDNLILNVDGCIAVCFVDLLRNCGAFTLE 566
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 323
E +E + +G LNG+FVL RSIGLIGH DQKRL+ PLYRHPW+D LY
Sbjct: 567 EANEYINLGILNGMFVLGRSIGLIGHHLDQKRLRAPLYRHPWDDFLY 613
>gi|603074|gb|AAB60340.1| (U18197) ATP:citrate lyase [Homo sapiens]
Length = 1101
Frame 3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | | | 1101
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 335 (117.9 bits), Expect = 4.6e-28, P = 4.6e-28
Identities = 59/107 (55%), Positives = 80/107 (74%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
V++L+ + R HFP+ ++YA++VE T +K NL+LNVDG IG F+D+L G FT++
Sbjct: 987 VQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIGVAFVDMLRNCGSFTRE 1046
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 323
E DE ++IG LNG+FVL RS+G IGH DQKRLKQ LYRHPW+D+ Y
Sbjct: 1047 EADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1093
>gi|4501865 ref|NP_001087.1| ATP citrate lyase [Homo sapiens]
>gi|1703083|sp|P53396|ACLY_HUMAN ATP-CITRATE (PRO-S-)-LYASE
(CITRATE CLEAVAGE ENZYME) >gi|105392|pir||S21173 ATP citrate
(pro-S)-lyase - human >gi|28935|emb|CAA45614.1| (X64330)
ATP-citrate (pro-S-)-lyase [Homo sapiens]
Length = 1105
Frame 3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | | | 1105
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 335 (117.9 bits), Expect = 4.6e-28, P = 4.6e-28
Identities = 59/107 (55%), Positives = 80/107 (74%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
V++L+ + R HFP+ ++YA++VE T +K NL+LNVDG IG F+D+L G FT++
Sbjct: 991 VQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIGVAFVDMLRNCGSFTRE 1050
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 323
E DE ++IG LNG+FVL RS+G IGH DQKRLKQ LYRHPW+D+ Y
Sbjct: 1051 EADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1097
>gi|8392839 ref|NP_058683.1| ATP citrate lyase [Rattus norvegicus]
>gi|113116|sp|P16638|ACLY_RAT ATP-CITRATE (PRO-S-)-LYASE (CITRATE
CLEAVAGE ENZYME) >gi|111396|pir||A35007 ATP citrate (pro-S)-lyase
(EC 4.1.3.8) - rat >gi|203490|gb|AAA74463.1| (J05210) ATP
citrate-lyase [Rattus norvegicus]
Length = 1100
Frame 3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | | | 1100
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 334 (117.6 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 60/107 (56%), Positives = 80/107 (74%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
V++L+ F + HFP+ ++YA++VE T +K NL+LNVDG IG F+D+L G FT++
Sbjct: 986 VQILKDFVKQHFPATPLLDYALEVEKITTSKKPNLILNVDGFIGVAFVDMLRNCGSFTRE 1045
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 323
E DE V+IG LNG+FVL RS+G IGH DQKRLKQ LYRHPW+D+ Y
Sbjct: 1046 EADEYVDIGALNGVFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1092
>gi|1703082|sp|P53585|ACLY_CAEEL PROBABLE ATP-CITRATE (PRO-S-)-LYASE (CITRATE
CLEAVAGE ENZYME) >gi|7498057|pir||T29496 hypothetical protein
D1005.1 - Caenorhabditis elegans >gi|1326262|gb|AAB00585.1|
(U58727) coded for by C. elegans cDNA yk133b7.5; coded for by C.
elegans cDNA yk133b7.3; coded for by C. elegans cDNA CEESE58F;
strong similarity to ATP citrate lyase and the alpha chain of
succinyl-coa synthases [Caenorhabditis elegans]
Length = 1106
Frame 3 hits (HSPs): ______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | | | 1106
0 150 300 450 600 750 900 1050
__________________
Annotated Domains:
DOMO DM07845: 1..513
DOMO DM01167: SUCCINATE--COALIGASE(ADP-FORMIN 515..801
DOMO DM07844: 803..1105
Entrez active site: PHOSPHORYLATED IN THE COURS 760
PFAM ligase-CoA: CoA-ligases 642..793
PRODOM PD010086: ACLY(3) 1..430
PRODOM PD191737: ACLY(1) P90731(1) 432..477
PRODOM PD014373: ACLY(3) P90731(1) Q13037(1) 492..638
PRODOM PD002034: SUCD(8) SUCA(5) ACLY(3) 640..760
PRODOM PD013870: ACLY(3) P90731(1) Q13037(1) 762..873
PRODOM PD000990: CISY(35) CISZ(7) ACLY(3) 875..1078
PRODOM PD039315: ACLY(1) P90731(1) 1080..1102
__________________
Plus Strand HSPs:
Score = 326 (114.8 bits), Expect = 4.2e-27, P = 4.2e-27
Identities = 66/110 (60%), Positives = 79/110 (71%), Frame = +3
Query: 3 VELLQKFA--RTHFPS-VKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMF 173
VE+L++FA + F EYA++VE T K NL+LNVDGAI LF+D+L SGMF
Sbjct: 987 VEILKRFAMDKKEFAQETPLFEYALEVEKITTAKKPNLILNVDGAIAILFVDILRHSGMF 1046
Query: 174 TKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 323
TKQE +E +EIG LNGLFVL RSIG IGH DQ RLKQ LYRHPW+D+ Y
Sbjct: 1047 TKQEAEETIEIGSLNGLFVLGRSIGFIGHYLDQSRLKQGLYRHPWDDISY 1096
>gi|1841540|gb|AAB47486.1| (U87317) ATP citrate lyase [Drosophila melanogaster]
Length = 391
Frame 3 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | 391
0 150 300
Plus Strand HSPs:
Score = 309 (108.8 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 55/107 (51%), Positives = 76/107 (71%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
V+++++F +FP+ ++YA++VE T K NL+LNVDG I + F+D+L SG FT +
Sbjct: 278 VKIIKEFVLENFPACPLLKYALEVEKITTNKKPNLILNVDGVIATAFVDMLRNSGSFTSE 337
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 323
E E + +G +N LFVL RSIG IGH DQKRLKQ LYRHPW+D+ Y
Sbjct: 338 EAQEYINVGAINSLFVLGRSIGFIGHYMDQKRLKQGLYRHPWDDISY 384
>gi|9229902|dbj|BAB00624.1| (AB036847) ATP citrate-lyase [Ciona intestinalis]
Length = 1101
Frame 3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | | | 1101
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 321 (113.0 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 60/107 (56%), Positives = 79/107 (73%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
V +L++F +++FPS ++YA++VE T K NL+LNVDG IG F+DLL G G FT++
Sbjct: 987 VVILKEFVKSNFPSTPLLDYALEVEKVTTAKKPNLILNVDGFIGVTFVDLLRGCGCFTEE 1046
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 323
E E V+IG LNG+FVL RS+G IGH DQ RLKQ LYRHPW+D+ Y
Sbjct: 1047 EAREYVQIGALNGVFVLGRSMGFIGHYLDQLRLKQGLYRHPWDDISY 1093
>gi|4107343|emb|CAA12224.1| (AJ224922) ATP citrate lyase [Sordaria macrospora]
>gi|7160185|emb|CAB76165.1| (AJ243817) ATP citrate lyase, subunit 1
[Sordaria macrospora]
Length = 674
Frame 3 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 674
0 150 300 450 600
Plus Strand HSPs:
Score = 313 (110.2 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 57/107 (53%), Positives = 78/107 (72%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
VEL++++ + FPS K ++YA+ VET T +K +NL+LNVDG I F+DLL G F+ +
Sbjct: 547 VELVKEYVKAKFPSSKLLDYALAVETVTTSKKDNLILNVDGCIAVCFVDLLRNCGAFSTE 606
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 323
E ++ + +G LNGLFVL RSIGLI H DQKRL+ LYRHPW+D+ Y
Sbjct: 607 EAEDYLSMGVLNGLFVLGRSIGLIAHYLDQKRLRTGLYRHPWDDITY 653
>gi|7494888|pir||T18713 hypothetical protein B0365.1 - Caenorhabditis elegans
>gi|3873757|emb|CAB02690.1| (Z81028) Similarity to Human ATP
citrate lyase (TR:G603074), contains similarity to Pfam domain:
PF00549 (CoA-ligases), Score=254.2, E-value=5.6e-73, N=1~cDNA EST
yk1f3.3 comes from this gene~cDNA EST yk9g5.5 comes from this
gene~cDNA EST yk1f3.5 comes>
Length = 1099
Frame 3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | | | 1099
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 313 (110.2 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 61/110 (55%), Positives = 78/110 (70%), Frame = +3
Query: 3 VELLQKFA--RTHFPS-VKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMF 173
VE+L++FA + F ++YA++VE T K NL+LNVDGAI +F+D+L SGMF
Sbjct: 983 VEILKRFALNKKEFAQETPLLDYALEVEKITTAKKPNLILNVDGAIAIIFVDILRNSGMF 1042
Query: 174 TKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 323
T E E++EIG LNG+FVL RSIG IGH DQ RLKQ LYRHPW+D+ Y
Sbjct: 1043 TTAEAQEVIEIGALNGMFVLGRSIGFIGHYLDQSRLKQGLYRHPWDDISY 1092
>gi|7303012|gb|AAF58082.1| (AE003808) ATPCL gene product [Drosophila
melanogaster]
Length = 1086
Frame 3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | | | 1086
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 309 (108.8 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 55/107 (51%), Positives = 76/107 (71%), Frame = +3
Query: 3 VELLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQ 182
V+++++F +FP+ ++YA++VE T K NL+LNVDG I + F+D+L SG FT +
Sbjct: 973 VKIIKEFVLENFPACPLLKYALEVEKITTNKKPNLILNVDGVIATAFVDMLRNSGSFTSE 1032
Query: 183 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 323
E E + +G +N LFVL RSIG IGH DQKRLKQ LYRHPW+D+ Y
Sbjct: 1033 EAQEYINVGAINSLFVLGRSIGFIGHYMDQKRLKQGLYRHPWDDISY 1079
>gi|12407237|dbj|BAB21376.1| (AB054670) ATP-citrate lyase alpha-subunit
[Chlorobium limicola]
Length = 608
Frame 3 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | || 608
0 150 300 450 600
Plus Strand HSPs:
Score = 139 (48.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 35/82 (42%), Positives = 45/82 (54%), Frame = +3
Query: 54 MEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQEIDEIVEIGYLNGLFVL 233
++YA++VE T K NL+LNVDG IG + +DL D + LNG FVL
Sbjct: 521 LDYALEVEKVTTAKKGNLILNVDGTIGCILMDL------------D--FPVHSLNGFFVL 566
Query: 234 ARSIGLIGHTFDQKRLKQPLYR 299
AR+IG+IGH DQ L R
Sbjct: 567 ARTIGMIGHWIDQNNQNSRLIR 588
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.346 0.156 0.496
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.363 0.159 0.702
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.363 0.161 0.584
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.357 0.153 0.539
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.341 0.146 0.480
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.348 0.150 0.487
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 199 199 10. 77 3 12 22 0.093 35
31 0.10 38
+2 0 200 200 10. 77 3 12 22 0.094 35
31 0.10 38
+1 0 200 199 10. 77 3 12 22 0.093 35
31 0.10 38
-1 0 200 200 10. 77 3 12 22 0.094 35
31 0.10 38
-2 0 200 200 10. 77 3 12 22 0.094 35
31 0.10 38
-3 0 199 199 10. 77 3 12 22 0.093 35
31 0.10 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 17
No. of states in DFA: 595 (59 KB)
Total size of DFA: 237 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 188.06u 1.01s 189.07t Elapsed: 00:00:38
Total cpu time: 188.09u 1.03s 189.12t Elapsed: 00:00:38
Start: Thu Jan 17 02:11:18 2002 End: Thu Jan 17 02:11:56 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000