# cumulative hits at level: 3 from root 
# for bio.clean
RNA localization	120
glucose homeostasis	2
lymph gland hemopoiesis	4
viral assembly, maturation, egress, and release	2
ion homeostasis	93
cholesterol homeostasis	1
signal transduction	968
biopolymer metabolism	1806
thermoregulation	3
autophagy	20
posttranscriptional gene silencing	6
positive regulation of cellular process	266
locomotor rhythm	25
learning	41
regulation of pole plasm oskar mRNA localization	39
cell maturation	4
cell death	635
embryonic development (sensu Metazoa)	127
mating behavior	15
female sex differentiation	13
regulation of cell differentiation	112
cell aging	16
regulation of growth	85
respiratory tube development	16
transport	1752
chromosome segregation	190
initiation of viral infection	4
adult locomotory behavior	35
sporulation	195
regulation of signal transduction	139
cell proliferation	200
regulation of neurogenesis	19
cell division	545
spore germination	28
nuclear division	9
cell growth	90
dorsal/ventral pattern formation	13
memory	3
carbon utilization	282
urea cycle intermediate metabolism	22
bristle morphogenesis	7
spermatid cell differentiation	128
positive regulation of gene expression, epigenetic	1
cellularization (sensu Metazoa)	15
regulation of body fluids	85
cell organization and biogenesis	1004
cell-cell signaling	255
primary sex determination	2
germ-line stem cell maintenance	1
tissue death	111
sexual reproduction	465
protein secretion	29
reproductive physiological process	8
meristem maintenance	1
muscle contraction	91
muscle cell differentiation	5
cell killing	30
anterior/posterior pattern formation	88
response to endogenous stimulus	575
cellular morphogenesis	279
myeloid blood cell differentiation	12
nitrogen compound metabolism	242
regulation of cell growth	67
regulation of development, heterochronic	8
hormone secretion	15
cellular morphogenesis during differentiation	49
vesicle fusion	21
secondary metabolism	447
establishment of localization	1752
regulation of metabolism	1791
biosynthesis	2219
female sex determination	2
photosynthesis, dark reaction	64
epithelial cell differentiation	13
photosynthesis, light reaction	352
cone cell differentiation	3
germ-line sex determination	11
response to stress	1895
cell motility	272
negative regulation of cellular process	293
positive regulation of enzyme activity	107
regulation of lyase activity	1
symbiosis, mutualism through parasitism	68
blood coagulation	22
cellular metabolism	6306
circulation	26
olfactory behavior	29
mesoderm morphogenesis	1
organ growth	10
response to external stimulus	1600
genitalia morphogenesis	1
pole cell development	3
secretory pathway	195
respiratory gaseous exchange	7
organogenesis	621
larval development (sensu Nematoda)	17
lymphocyte differentiation	46
viral genome replication	35
synaptic vesicle to endosome fusion	5
eye pigmentation	7
plasmid maintenance	30
molting cycle	4
response to biotic stimulus	1647
determination of adult life span	64
conjugation	77
root morphogenesis	1
neurophysiological process	330
budding cell bud growth	25
regulation of cellular physiological process	518
negative regulation of development	38
imaginal disc pattern formation	6
regulation of transferase activity	91
body growth	7
regulation of meristem development	9
neuron cell differentiation	20
meristem growth	1
regulation of coagulation	4
sperm competition	6
somatic sex determination	2
neurotransmitter secretion	97
oocyte differentiation	23
morphogenesis of an epithelium	41
male sex differentiation	4
eggshell pattern formation (sensu Insecta)	3
cell homeostasis	140
regulation of viral genome replication	32
asexual reproduction	37
regulation of fusion of sperm to egg plasma membrane	2
catabolism	1542
circadian behavior	57
immune response	702
negative regulation of enzyme activity	37
vacuole fusion, non-autophagic	31
visual learning	7
blastoderm segmentation	55
cell adhesion	221
sleep	34
circadian rhythm	60
negative regulation of physiological process	409
embryonic morphogenesis	58
eye pigment precursor transport	1
proximal/distal pattern formation	15
maintenance of localization	28
positive regulation of physiological process	272
behavioral response to cocaine	5
locomotion	7
regulation of photosynthesis	16
menstrual cycle	3
gravitactic behavior	5
oviposition	1
plasma membrane fusion	4
tube morphogenesis	34
excretion	68
response to extracellular stimulus	68
bone remodeling	3
embryonic pattern specification	58
regulation of secretion	22
post-embryonic hemopoiesis	4
regulation of cell adhesion	21
larval development (sensu Insecta)	13
intercellular bridge organization and biogenesis	7
hormone-mediated signaling	144
osmoregulation	6
nodulation	50
primary metabolism	5730
development of primary sexual characteristics	32
anagen	4
positive regulation of development	57
mitotic cell cycle, embryonic	18
vasculogenesis	8
vasculature development	32
hemocyte differentiation (sensu Arthropoda)	18
extracellular matrix organization and biogenesis	28
metamorphosis (sensu Insecta)	195
cell cycle	873
regulation of bicoid mRNA localization	3
spermatid cell development	124
cell fate commitment	52
entry into host cell	4
gonadal mesoderm development	10
appendage morphogenesis	37
appendage segmentation	3
regulation of hydrolase activity	76
dorsal trunk growth	1
DNA methylation	12
regulation of organismal physiological process	70
viral genome expression	80
blastocyst growth	1
protein localization	466
flower development	28
filamentous growth	81
axis specification	111
keratinocyte differentiation	2
digestion	43
determination of symmetry	3
behavioral response to ethanol	3
cell activation	48
photoreceptor cell differentiation	66
water homeostasis	62
macromolecule metabolism	3898
vulval development (sensu Nematoda)	14
imaginal disc growth	17
negative regulation of gene expression, epigenetic	49
myoblast differentiation	2
adipocyte differentiation	7
# cumulative hits at level: 3 from root 
# for bio.clean
RNA localization	144
glucose homeostasis	4
lymph gland hemopoiesis	6
viral assembly, maturation, egress, and release	3
ion homeostasis	118
cholesterol homeostasis	3
signal transduction	1129
biopolymer metabolism	2287
autophagy	21
thermoregulation	4
posttranscriptional gene silencing	10
positive regulation of cellular process	319
locomotor rhythm	20
learning	47
regulation of pole plasm oskar mRNA localization	51
cell maturation	3
cell death	787
embryonic development (sensu Metazoa)	149
mating behavior	19
female sex differentiation	13
cell aging	21
regulation of cell differentiation	137
regulation of growth	99
respiratory tube development	19
transport	2326
chromosome segregation	210
initiation of viral infection	4
adult locomotory behavior	42
regulation of signal transduction	168
sporulation	223
cell proliferation	272
regulation of neurogenesis	29
cell division	591
spore germination	32
nuclear division	7
cell growth	103
dorsal/ventral pattern formation	18
memory	6
carbon utilization	223
urea cycle intermediate metabolism	21
bristle morphogenesis	7
spermatid cell differentiation	142
positive regulation of gene expression, epigenetic	3
cellularization (sensu Metazoa)	22
cell organization and biogenesis	1286
regulation of body fluids	133
cell-cell signaling	340
germ-line stem cell maintenance	1
primary sex determination	2
tissue death	139
sexual reproduction	555
protein secretion	41
reproductive physiological process	11
muscle contraction	76
muscle cell differentiation	7
cell killing	21
anterior/posterior pattern formation	119
response to endogenous stimulus	631
cellular morphogenesis	342
myeloid blood cell differentiation	15
regulation of cell growth	75
nitrogen compound metabolism	291
regulation of development, heterochronic	6
hormone secretion	27
cellular morphogenesis during differentiation	55
vesicle fusion	34
secondary metabolism	480
regulation of metabolism	2115
establishment of localization	2326
biosynthesis	2882
female sex determination	2
photosynthesis, dark reaction	82
epithelial cell differentiation	12
photosynthesis, light reaction	236
germ-line sex determination	12
cone cell differentiation	1
response to stress	2269
cell motility	264
negative regulation of cellular process	369
positive regulation of enzyme activity	133
regulation of lyase activity	2
symbiosis, mutualism through parasitism	64
blood coagulation	30
cellular metabolism	7636
olfactory behavior	37
circulation	37
mesoderm morphogenesis	1
organ growth	9
response to external stimulus	1935
genitalia morphogenesis	3
pole cell development	3
secretory pathway	277
respiratory gaseous exchange	9
larval development (sensu Nematoda)	15
organogenesis	751
viral genome replication	50
lymphocyte differentiation	58
synaptic vesicle to endosome fusion	12
eye pigmentation	16
plasmid maintenance	96
molting cycle	2
response to biotic stimulus	1848
determination of adult life span	67
conjugation	70
endothelial cell differentiation	1
neurophysiological process	436
budding cell bud growth	35
regulation of cellular physiological process	636
negative regulation of development	51
dosage compensation	4
imaginal disc pattern formation	6
regulation of transferase activity	114
body growth	9
regulation of meristem development	6
neuron cell differentiation	31
regulation of coagulation	7
sperm competition	5
somatic sex determination	2
neurotransmitter secretion	138
oocyte differentiation	29
male sex determination	1
morphogenesis of an epithelium	47
eggshell pattern formation (sensu Insecta)	3
male sex differentiation	7
cell homeostasis	170
regulation of viral genome replication	47
asexual reproduction	56
regulation of fusion of sperm to egg plasma membrane	4
catabolism	1927
mating type determination	5
circadian behavior	71
immune response	737
negative regulation of enzyme activity	43
vacuole fusion, non-autophagic	41
visual learning	8
blastoderm segmentation	77
cell adhesion	292
sleep	48
circadian rhythm	75
negative regulation of physiological process	536
DNA methylation during embryonic development	1
embryonic morphogenesis	64
eye pigment precursor transport	3
proximal/distal pattern formation	13
positive regulation of physiological process	342
maintenance of localization	37
behavioral response to cocaine	3
locomotion	8
regulation of photosynthesis	5
menstrual cycle	1
gravitactic behavior	3
oviposition	2
plasma membrane fusion	6
excretion	115
tube morphogenesis	44
bone remodeling	14
response to extracellular stimulus	91
embryonic pattern specification	81
regulation of secretion	41
post-embryonic hemopoiesis	6
regulation of cell adhesion	23
larval development (sensu Insecta)	18
notum morphogenesis	3
intercellular bridge organization and biogenesis	5
hormone-mediated signaling	162
osmoregulation	6
nodulation	76
primary metabolism	7012
development of primary sexual characteristics	31
anagen	2
positive regulation of development	65
mitotic cell cycle, embryonic	25
vasculogenesis	12
vasculature development	39
hemocyte differentiation (sensu Arthropoda)	32
metamorphosis (sensu Insecta)	235
cell cycle	1008
extracellular matrix organization and biogenesis	42
regulation of bicoid mRNA localization	3
spermatid cell development	138
cell fate commitment	68
entry into host cell	4
gonadal mesoderm development	10
appendage morphogenesis	36
regulation of hydrolase activity	91
appendage segmentation	3
regulation of organismal physiological process	82
DNA methylation	17
dorsal trunk growth	2
viral genome expression	118
blastocyst growth	2
protein localization	641
flower development	35
filamentous growth	94
axis specification	154
keratinocyte differentiation	2
digestion	64
determination of symmetry	2
behavioral response to ethanol	3
cell activation	60
water homeostasis	102
photoreceptor cell differentiation	79
vulval development (sensu Nematoda)	12
macromolecule metabolism	4834
negative regulation of gene expression, epigenetic	69
imaginal disc growth	18
myoblast differentiation	1
adipocyte differentiation	9