R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|9759318|dbj|BAB09685.1| (AP002544) gb|AAF00668.1~gene_id:MBL20.8~similar to
unknown protein [Arabidopsis thaliana]
Length = 202
Frame 1 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | || 202
0 50 100 150 200
Plus Strand HSPs:
Score = 579 (203.8 bits), Expect = 3.3e-55, P = 3.3e-55
Identities = 117/184 (63%), Positives = 140/184 (76%), Frame = +1
Query: 55 STTIDVP-ESSNVAKGKAVLTAPPRP----GGWKKGVAIMDFILRLGAIAAALGAAATMG 219
S +DVP ESS+V KGKA L R GG+K+G++I DF+LRL AI AAL AAATMG
Sbjct: 5 SIAVDVPAESSSVIKGKAPLLGLARDHTGSGGYKRGLSIFDFLLRLAAIVAALAAAATMG 64
Query: 220 TSDQTLPFFTQFFQFEASYDSFTSFQFFVITMALVGGYLVLSLPFSFVAIIRPHAAGPRL 399
TSD+TLPFFTQF QFEASYD +FQFFV+ +A+V GYLVLSLPFS V I+RP A PRL
Sbjct: 65 TSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPLAVAPRL 124
Query: 400 FLIILDTVFLTLATASGASAAAKVYLAHNGNQDSNWLAICNQFGDFCAQTSSAVVSSFVA 579
L++LDT L L TA+ ++AAA VYLAHNGN ++NWL IC QFGDFC +TS AVVS+F +
Sbjct: 125 LLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAFAS 184
Query: 580 VVVL 591
V L
Sbjct: 185 VTFL 188
>gi|12322903|gb|AAG51441.1|AC008153_14 (AC008153) unknown protein; 80797-81587
[Arabidopsis thaliana]
Length = 204
Frame 1 hits (HSPs): ______________________________________________
__________________________________________________
Database sequence: | | | | | | 204
0 50 100 150 200
Plus Strand HSPs:
Score = 578 (203.5 bits), Expect = 4.2e-55, P = 4.2e-55
Identities = 121/184 (65%), Positives = 140/184 (76%), Frame = +1
Query: 55 STTIDVP-ESSNVAKGKAVLTAPPRP------GGWKKGVAIMDFILRLGAIAAALGAAAT 213
ST IDVP ESS+ KGKA L R GG+ +G+AI DF+LRL AI AAL AAAT
Sbjct: 5 STFIDVPAESSSAMKGKAPLIGVARDHTTSGSGGYNRGLAIFDFLLRLAAIVAALAAAAT 64
Query: 214 MGTSDQTLPFFTQFFQFEASYDSFTSFQFFVITMALVGGYLVLSLPFSFVAIIRPHAAGP 393
MGTSD+TLPFFTQF QFEASYD +FQFFVI MALVGGYLVLSLP S V I+RP A P
Sbjct: 65 MGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISVVTILRPLATAP 124
Query: 394 RLFLIILDTVFLTLATASGASAAAKVYLAHNGNQDSNWLAICNQFGDFCAQTSSAVVSSF 573
RL L++LDT L L TA+ +SAAA YLAH+GNQ++NWL IC QFGDFC ++S AVVS+F
Sbjct: 125 RLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSGAVVSAF 184
Query: 574 VAVV 585
V+VV
Sbjct: 185 VSVV 188
>gi|4678222|gb|AAD26967.1|AC007135_4 (AC007135) unknown protein [Arabidopsis
thaliana]
Length = 206
Frame 1 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | | 206
0 50 100 150 200
Plus Strand HSPs:
Score = 519 (182.7 bits), Expect = 7.5e-49, P = 7.5e-49
Identities = 104/191 (54%), Positives = 133/191 (69%), Frame = +1
Query: 49 KMSTTIDVPESSNVAKG---------KAVLTAPPRPGGWKKGVAIMDFILRLGAIAAALG 201
K STTIDV E S V K K A GG K+G+AI DF+LRL AIA +G
Sbjct: 3 KESTTIDVGEPSTVTKSSSHVVKDAKKKGFVAVASRGGAKRGLAIFDFLLRLAAIAVTIG 62
Query: 202 AAATMGTSDQTLPFFTQFFQFEASYDSFTSFQFFVITMALVGGYLVLSLPFSFVAIIRPH 381
AA+ M T+++TLPFFTQF QF+A YD +FQ+FVI +A+V YLVLSLPFS V+I+RPH
Sbjct: 63 AASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVAVVASYLVLSLPFSIVSIVRPH 122
Query: 382 AAGPRLFLIILDTVFLTLATASGASAAAKVYLAHNGNQDSNWLAICNQFGDFCAQTSSAV 561
A PRL L+I DT+ +TL T++ A+AA+ YLAHNGNQ +NWL IC QFGDFC S+AV
Sbjct: 123 AVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQFGDFCQNVSTAV 182
Query: 562 VSSFVAVVVLV 594
V+ +A++ +
Sbjct: 183 VADSIAILFFI 193
>gi|5306261|gb|AAD41993.1|AC006233_16 (AC006233) unknown protein [Arabidopsis
thaliana]
Length = 221
Frame 1 hits (HSPs): ____________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 482 (169.7 bits), Expect = 6.3e-45, P = 6.3e-45
Identities = 91/156 (58%), Positives = 113/156 (72%), Frame = +1
Query: 127 PGGWKKGVAIMDFILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTSFQFFV 306
P GWK+GVAI DF+LRL A A+ AAA M T+++TLPFFTQF QF+A Y + FV
Sbjct: 52 PAGWKRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMSSFV 111
Query: 307 ITMALVGGYLVLSLPFSFVAIIRPHAAGPRLFLIILDTVFLTLATASGASAAAKVYLAHN 486
I ++VGGYL LSLPFS V I+RP A PRLFLI+ DTV + L + +++AA VYLAHN
Sbjct: 112 IVNSIVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIVYLAHN 171
Query: 487 GNQDSNWLAICNQFGDFCAQTSSAVVSSFVAVVVLV 594
GN SNWL +C QFGDFC TS AVV+SF+A +L+
Sbjct: 172 GNSSSNWLPVCQQFGDFCQGTSGAVVASFIAATLLM 207
>gi|11357888|pir||T49964 hypothetical protein F8M21.180 - Arabidopsis thaliana
>gi|7671498|emb|CAB89339.1| (AL353993) putative protein
[Arabidopsis thaliana]
Length = 187
Frame 1 hits (HSPs): __________________________________________
__________________________________________________
Database sequence: | | | | | 187
0 50 100 150
Plus Strand HSPs:
Score = 397 (139.8 bits), Expect = 6.4e-36, P = 6.4e-36
Identities = 74/157 (47%), Positives = 106/157 (67%), Frame = +1
Query: 124 RPGGWKKGVAIMDFILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTSFQFF 303
+ G + +AI++FILR+ A +G+A MGT+ +TLPFFTQF +F+A Y+ + FF
Sbjct: 17 KSGLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFF 76
Query: 304 VITMALVGGYLVLSLPFSFVAIIRPHAAGPRLFLIILDTVFLTLATASGASAAAKVYLAH 483
V+ A+V GYL+LSL +FV I++ R+ LIILD L L T+ +SAAA VYLAH
Sbjct: 77 VVANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAH 136
Query: 484 NGNQDSNWLAICNQFGDFCAQTSSAVVSSFVAVVVLV 594
NGN +NW AIC QF FC + S +++ SF+A+V+L+
Sbjct: 137 NGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLI 173
>gi|5080791|gb|AAD39301.1|AC007576_24 (AC007576) Hypothetical protein
[Arabidopsis thaliana]
Length = 209
Frame 1 hits (HSPs): _____________________________________
__________________________________________________
Database sequence: | | | | | | 209
0 50 100 150 200
Plus Strand HSPs:
Score = 325 (114.4 bits), Expect = 2.7e-28, P = 2.7e-28
Identities = 65/151 (43%), Positives = 95/151 (62%), Frame = +1
Query: 142 KGVAIMDFILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTSFQFFVITMAL 321
KG++++ F+LRL A+ +G+A MGT+ +++ +Q + Y + FFV+ A+
Sbjct: 46 KGISVLGFVLRLFAVFGTIGSALAMGTTHESVVSLSQLVLLKVKYSDLPTLMFFVVANAI 105
Query: 322 VGGYLVLSLPFSFVAIIRPHAAGPRLFLIILDTVFLTLATASGASAA-AKVYLAHNGNQD 498
GGYLVLSLP S I A R+ L+++DTV L L + SGASAA A VYLAH GN
Sbjct: 106 SGGYLVLSLPVSIFHIFSTQAKTSRIILLVVDTVMLALVS-SGASAATATVYLAHEGNTT 164
Query: 499 SNWLAICNQFGDFCAQTSSAVVSSFVAVVVLV 594
+NW IC QF FC + S +++ SF AV++L+
Sbjct: 165 ANWPPICQQFDGFCERISGSLIGSFCAVILLM 196
>gi|4206208|gb|AAD11596.1|AAD11596 (AF071527) hypothetical protein [Arabidopsis
thaliana] >gi|4263041|gb|AAD15310.1| (AC005142) hypothetical
protein [Arabidopsis thaliana] >gi|7270677|emb|CAB77839.1|
(AL161497) hypothetical protein [Arabidopsis thaliana]
Length = 164
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | 164
0 50 100 150
Plus Strand HSPs:
Score = 201 (70.8 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 50/143 (34%), Positives = 74/143 (51%), Frame = +1
Query: 166 ILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTSFQFFVITMALVGGYLVLS 345
+LRL A AAL A M TS + F EA Y +F++FVI A+V Y
Sbjct: 12 VLRLAAFGAALAALIVMITSRERASFLA--ISLEAKYTDMAAFKYFVIANAVVSVY---- 65
Query: 346 LPFSFVAIIRPHAAGPRLFLIILDTVFLTLATASGASAAAKVYLAHNGNQDSNWLAICNQ 525
SF+ + P + F+++LD V L T+S ++A A + GN ++ WL IC Q
Sbjct: 66 ---SFLVLFLPKESLLWKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQ 122
Query: 526 FGDFCAQTSSAVVSSFVAVVVLV 594
FC Q + A+++ FVA+V+ V
Sbjct: 123 VPKFCDQITGALIAGFVALVLYV 145
>gi|7485922|pir||T00891 hypothetical protein F21B7.5 - Arabidopsis thaliana
>gi|9280651|gb|AAF86520.1|AC002560_13 (AC002560) F21B7.30
[Arabidopsis thaliana]
Length = 164
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | 164
0 50 100 150
Plus Strand HSPs:
Score = 192 (67.6 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 48/143 (33%), Positives = 73/143 (51%), Frame = +1
Query: 166 ILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTSFQFFVITMALVGGYLVLS 345
+LR A AALGA M TS + FF A Y +F++FVI A+V Y
Sbjct: 12 VLRFAAFCAALGAVIAMITSRERSSFFV--ISLVAKYSDLAAFKYFVIANAIVTVY---- 65
Query: 346 LPFSFVAIIRPHAAGPRLFLIILDTVFLTLATASGASAAAKVYLAHNGNQDSNWLAICNQ 525
SF+ + P + F+++LD + L T+S ++A A + GN ++ WL IC Q
Sbjct: 66 ---SFLVLFLPKESLLWKFVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQ 122
Query: 526 FGDFCAQTSSAVVSSFVAVVVLV 594
FC Q + A+++ VA+V+ V
Sbjct: 123 VPRFCDQITGALIAGLVALVLYV 145
>gi|6437548|gb|AAF08575.1|AC011623_8 (AC011623) unknown protein [Arabidopsis
thaliana]
Length = 199
Frame 1 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 199
0 50 100 150
Plus Strand HSPs:
Score = 180 (63.4 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 56/186 (30%), Positives = 88/186 (47%), Frame = +1
Query: 55 STTIDVPESSNVAKGKAVLTAPPRPGGWKKGVAIMDFILRLGAIAAALGAAATMGTSDQT 234
ST PE+ A T PP +D I R+ +A L A M TSDQT
Sbjct: 3 STENPDPETGKSEPIPASATPPPSSAASFLDCRKIDIITRVLLFSATLTALIVMVTSDQT 62
Query: 235 ----LPFFTQFFQFEASYDSFTSFQFFVITMALVGGYLVLSLPFSFVAIIRPH-AAGPRL 399
LP + A ++ +F +FV+ + + Y ++S S +++P A +
Sbjct: 63 EMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVASFYALISTLVSISLLLKPEFTAQFSI 122
Query: 400 FLIILDTVFL-TLATASGASAAAKVYLAHNGNQDSNWLAICNQFGDFCAQ-TSSAVVSSF 573
+L LD V L LA+A+G +A Y+A GN++ W ICN + FC +S +S F
Sbjct: 123 YLASLDMVMLGILASATG-TAGGVAYIALKGNEEVGWNKICNVYDKFCRYIATSLALSLF 181
Query: 574 VAVVVLV 594
++++LV
Sbjct: 182 ASLLLLV 188
>gi|5734748|gb|AAD50013.1|AC007651_8 (AC007651) Unknown protein [Arabidopsis
thaliana]
Length = 204
Frame 1 hits (HSPs): ____________________________________
__________________________________________________
Database sequence: | | | | | | 204
0 50 100 150 200
Plus Strand HSPs:
Score = 165 (58.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 43/150 (28%), Positives = 75/150 (50%), Frame = +1
Query: 145 GVAIMDFILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTSFQFFVITMALV 324
G+ + +LRL + + A M +T F + SY + T+F++ V +
Sbjct: 29 GIRTAETMLRLAPVGLCVAALVVMLKDSETNEFGS------ISYSNLTAFRYLVHANGIC 82
Query: 325 GGYLVLSLPFSFVAIIRPHAAGPRLFLII-LDTVFLTLATASGASAAAKVYLAHNGNQDS 501
GY +LS + A+ R + PR++ LD + L A+GA +A +YLA+NG+
Sbjct: 83 AGYSLLSA--AIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAI 140
Query: 502 NWLAICNQFGDFCAQ-TSSAVVSSFVAVVVLV 594
W C+ +G FC + T+S +++ FV +V
Sbjct: 141 TWSDACSSYGGFCHRATASVIITFFVVCFYIV 172
>gi|9758708|dbj|BAB09162.1| (AB017065) gene_id:MFC16.23~pir||T10581~similar to
unknown protein [Arabidopsis thaliana]
Length = 197
Frame 1 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | | 197
0 50 100 150
Plus Strand HSPs:
Score = 165 (58.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 45/149 (30%), Positives = 77/149 (51%), Frame = +1
Query: 169 LRLGAIAAALGAAATMGTSDQTLPFF------TQF-FQFEASYDSFTSFQFFVITMALVG 327
LRL A +A L AA MG + +T F T F A +D +F FFV+ A+V
Sbjct: 22 LRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFVFFVVANAMVS 81
Query: 328 GYLVLSLPFSFVAIIRPHAAGPRLFLI-ILDTVFLTLATASGASAAAKVYLAHNGNQDSN 504
+ +L + + G RL + ILD + +TL +A+ +AA + NGN+ +
Sbjct: 82 FHNLLMIALQIFGG-KMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNKHAR 140
Query: 505 WLAICNQFGDFCAQTSSAVVSSFVAVVVLV 594
W IC++F +C + A++++F V++++
Sbjct: 141 WDKICDRFATYCDHGAGALIAAFAGVILML 170
>gi|11692940|gb|AAG40073.1|AF324722_1 (AF324722) dl3845w [Arabidopsis thaliana]
>gi|11908074|gb|AAG41466.1|AF326884_1 (AF326884) unknown protein
[Arabidopsis thaliana]
Length = 193
Frame 1 hits (HSPs): ___________________________________________
__________________________________________________
Database sequence: | | | | | 193
0 50 100 150
Plus Strand HSPs:
Score = 153 (53.9 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 48/163 (29%), Positives = 76/163 (46%), Frame = +1
Query: 121 PRPGGWKKGVAIMDFILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTSFQ- 297
P G K ++ +LR AA L + M TS QT F FT+
Sbjct: 17 PGTGTTTKSCSMTQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPAAEFTNSPA 76
Query: 298 --FFVITMALVGGYLVLSLPFSFVAIIRPHAAGPRLFL--IILDTVFLTL-ATASGASAA 462
+FV+ +++ Y ++S F V+ + H+ L L I+D V + + A+A+GA
Sbjct: 77 LIYFVVALSVACFYSIVST-FVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGG 135
Query: 463 AKVYLAHNGNQDSNWLAICNQFGDFCAQTSSAV-VSSFVAVVVLV 594
YL GN++ W IC+ + FC A+ VS F +VV+L+
Sbjct: 136 V-AYLGLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLL 179
>gi|7339717|dbj|BAA92922.1| (AP001539) Similar to Arabidopsis thaliana
chromosome IV BAC T5L23; hypothetical protein. (AC005142) [Oryza
sativa]
Length = 162
Frame 1 hits (HSPs): ___________________________________________
__________________________________________________
Database sequence: | | | | | 162
0 50 100 150
Plus Strand HSPs:
Score = 130 (45.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 47/145 (32%), Positives = 71/145 (48%), Frame = +1
Query: 154 IMDFILRLGAIAAALGAAATMGTS-DQTLPFFTQFFQFEASYDSFTSFQFFVITMALVGG 330
I+ +LR+ A AA AA M S D+ + + + +A + S FFV A V
Sbjct: 9 IVAVVLRVAAAGAAAVAAVLMAMSHDEVIVYG---MEVQAKFRYTPSLVFFVAANAAVSA 65
Query: 331 --YLVLSLPFSFVAIIRPHAAGPRLFLIILDTVFLTLATASGASAAAKVYLAHNGNQDSN 504
+VL +P S + AA RL L++ D V + + A+A A L NGN +
Sbjct: 66 CSLVVLLVPSSTSKL----AA--RL-LLMADVVLGMVLAGAFAAAGAMAELGKNGNSHAG 118
Query: 505 WLAICNQFGDFCAQTSSAVVSSFVAVVV 588
W+AIC Q FC + SA+V+ +V+
Sbjct: 119 WIAICVQVPLFCDRVRSALVAGSATIVL 146
>gi|9279585|dbj|BAB01043.1| (AB022220) gb|AAD50013.1~gene_id:MLN21.16~similar
to unknown protein [Arabidopsis thaliana]
Length = 178
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | 178
0 50 100 150
Plus Strand HSPs:
Score = 130 (45.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 32/102 (31%), Positives = 51/102 (50%), Frame = +1
Query: 271 SYDSFTSFQFFVITMALVGGYLVLSLPFSFVAIIRPHAAGPRLFLIILDTVFLTLATASG 450
SY + +F + V + Y +LS + +A+ P + L +LD V + A+G
Sbjct: 55 SYSNIGAFMYLVSANGVCAAYSLLSA-LAILALPCPISKVQVRTLFLLDQVVTYVVLAAG 113
Query: 451 ASAAAKVYLAHNGNQDSNWLAICNQFGDFCAQTSSAVVSSFV 576
A +A VYLA+ GN W + C+ +G FC +VV +FV
Sbjct: 114 AVSAETVYLAYYGNIPITWSSACDSYGSFCHNALISVVFTFV 155
>gi|7430335|pir||A71421 hypothetical 15.5K protein - Arabidopsis thaliana
>gi|2244917|emb|CAB10339.1| (Z97339) hypothetical protein
[Arabidopsis thaliana] >gi|7268309|emb|CAB78603.1| (AL161542)
hypothetical protein [Arabidopsis thaliana]
Length = 146
Frame 1 hits (HSPs): _____________________________________________
__________________________________________________
Database sequence: | | | | 146
0 50 100
Plus Strand HSPs:
Score = 126 (44.4 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 40/132 (30%), Positives = 64/132 (48%), Frame = +1
Query: 214 MGTSDQTLPFFTQFFQFEASYDSFTSFQ---FFVITMALVGGYLVLSLPFSFVAIIRPHA 384
M TS QT F FT+ +FV+ +++ Y ++S F V+ + H+
Sbjct: 1 MVTSKQTKNIFLPGTPIRIPAAEFTNSPALIYFVVALSVACFYSIVST-FVTVSAFKKHS 59
Query: 385 AGPRLFL--IILDTVFLTL-ATASGASAAAKVYLAHNGNQDSNWLAICNQFGDFCAQTSS 555
L L I+D V + + A+A+GA YL GN++ W IC+ + FC
Sbjct: 60 CSAVLLLNLAIMDAVMVGIVASATGAGGGV-AYLGLKGNKEVRWGKICHIYDKFCRHVGG 118
Query: 556 AV-VSSFVAVVVLV 594
A+ VS F +VV+L+
Sbjct: 119 AIAVSLFASVVLLL 132
>gi|7486757|pir||T10581 hypothetical protein F9F13.40 - Arabidopsis thaliana
>gi|5262162|emb|CAB45805.1| (AL080253) putative protein
[Arabidopsis thaliana] >gi|7268835|emb|CAB79039.1| (AL161553)
putative protein [Arabidopsis thaliana]
Length = 197
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | 197
0 50 100 150
Plus Strand HSPs:
Score = 134 (47.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 42/161 (26%), Positives = 74/161 (45%), Frame = +1
Query: 130 GGWKKGVAIMDFILRLGAIAAALGAAATMGTSDQTLPFFTQFF-------QFEASYDSFT 288
GG K ++ LR+ A A L AA M + +T A +
Sbjct: 10 GGTTKSWKLL-LGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTP 68
Query: 289 SFQFFVITMALVGGYLVLSLPFSFVAIIRPHAAGPRLFLI-ILDTVFLTLATASGASAAA 465
+F FFVI +V + +L + + + G RL I ILD + TL +A+ +A
Sbjct: 69 AFVFFVIANVMVSFHNLLMIVVQIFSR-KLEYKGLRLLSIAILDMLNATLVSAAANAAVF 127
Query: 466 KVYLAHNGNQDSNWLAICNQFGDFCAQTSSAVVSSFVAVVVLV 594
L NGN+ + W +C++F +C + A++++F V++++
Sbjct: 128 VAELGKNGNKHAKWNKVCDRFTTYCDHGAGAIIAAFAGVILML 170
>gi|7269354|emb|CAB79413.1| (AL161562) putative protein [Arabidopsis thaliana]
Length = 170
Frame 1 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | | 170
0 50 100 150
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 36/141 (25%), Positives = 68/141 (48%), Frame = +1
Query: 169 LRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTSFQFFVITMALVGGYLVLSL 348
+R+ I AA+ + M T+ + + FEA Y ++F++ V V + +L
Sbjct: 21 MRVLTIGAAMASMWVMITNREVASVYG--IAFEAKYSYSSAFRYLVYAQIAVCAATLFTL 78
Query: 349 PFSFVAIIRPHAAGPRLFLIILDTVFLTLATASGASAAAKVYLAHNGNQDSNWLAICNQF 528
++ +A+ R F +L T LT +A A A A+ Y+ GN+ + WL IC
Sbjct: 79 VWACLAVRRRGLVFALFFFDLLTT--LTAISAFSA-AFAEGYVGKYGNKQAGWLPICGYV 135
Query: 529 GDFCAQTSSAVVSSFVAVVVL 591
+C++ + ++ SF + ++L
Sbjct: 136 HGYCSRVTISLAMSFASFILL 156
>gi|4263779|gb|AAD15439.1| (AC006068) hypothetical protein [Arabidopsis
thaliana]
Length = 246
Frame 1 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | | 246
0 50 100 150 200
Plus Strand HSPs:
Score = 131 (46.1 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 38/150 (25%), Positives = 61/150 (40%), Frame = +1
Query: 148 VAIMDFILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTSFQFFVITMALVG 327
V + + ILR AL AA + T Q F Q +A + + V+ +
Sbjct: 27 VRVTELILRCLVCVLALVAAILIATDVQVREIF--MIQKKAKFTDMKALVLLVVVNGIAA 84
Query: 328 GYLVLSLPFSFVAIIRPHA--AGPRLFLIIL-DTVFLTLATASGASAAAKVYLAHNGNQD 498
GY ++ V +++ + P + I D L A A+AA A G +
Sbjct: 85 GYSLVQAVRCVVGLMKGRVLFSKPLAWAIFFGDQAVAYLCVAGVAAAAQSAAFAKLGEPE 144
Query: 499 SNWLAICNQFGDFCAQTSSAVVSSFVAVVVLV 594
W+ ICN +G FC Q + S+ A + +V
Sbjct: 145 LQWMKICNMYGKFCNQVGEGIASALFACIGMV 176
>gi|7485071|pir||C71421 hypothetical protein - Arabidopsis thaliana
>gi|2244919|emb|CAB10341.1| (Z97339) hypothetical protein
[Arabidopsis thaliana] >gi|7268311|emb|CAB78605.1| (AL161542)
hypothetical protein [Arabidopsis thaliana]
Length = 190
Frame 1 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 190
0 50 100 150
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 45/176 (25%), Positives = 82/176 (46%), Frame = +1
Query: 76 ESSNVAKGKAVLTAPPRPGGWKKGVAIMDFILRLGAIAAALGAAATMGTSDQT------- 234
ES N G + + G +KG ++ +R+ A+ + AA +G + QT
Sbjct: 4 ESKNKVDGME-MEKGKKESGSRKG---LELTMRVLALVLTMVAATVLGVAKQTKVVPIKL 59
Query: 235 ---LPFFTQFFQFEASYDSFTSFQFFVITMALVGGYLVLSLPFSFVAIIRPHAAGPRLFL 405
LP +ASY ++F + + A+ GY +S+ V I + + L
Sbjct: 60 IPTLPPLNVSTTAKASY--LSAFVYNISANAIACGYTAISIVI--VMISKGKRSKSLLMA 115
Query: 406 IIL-DTVFLTLATASGASAAAKVYLAHNGNQDSNWLAICNQFGDFCAQTSSAVVSSFVAV 582
+++ D + + L +S +A A + +GN+ W +C FG FC Q + +V + +A
Sbjct: 116 VLIGDLMMVALLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAITLIAS 175
Query: 583 VVLV 594
VV +
Sbjct: 176 VVFM 179
>gi|7485049|pir||B71421 hypothetical protein - Arabidopsis thaliana
>gi|2244918|emb|CAB10340.1| (Z97339) hypothetical protein
[Arabidopsis thaliana] >gi|7268310|emb|CAB78604.1| (AL161542)
hypothetical protein [Arabidopsis thaliana]
Length = 190
Frame 1 hits (HSPs): __________________________________________
__________________________________________________
Database sequence: | | | | | 190
0 50 100 150
Plus Strand HSPs:
Score = 120 (42.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 41/158 (25%), Positives = 77/158 (48%), Frame = +1
Query: 133 GWKKGVAIMDFILRLGAIAAALGAAATMGTSDQT----------LPFFTQFFQFEASYDS 282
G +KGV + +R+ A+ + AA +G + QT LP +ASY
Sbjct: 22 GSRKGV---ELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASY-- 76
Query: 283 FTSFQFFVITMALVGGYLVLSLPFSFVAIIRPHAAGPRLFLIILDTVFLTLATASGASAA 462
++F + + A+ GY +S+ + + I R + L +++L + + SG AA
Sbjct: 77 LSAFVYNISVNAIACGYTAISI--AILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAA 134
Query: 463 AKVYLAH-NGNQDSNWLAICNQFGDFCAQTSSAVVSSFVAVVVLV 594
+ + L +GN+ W +C FG FC + + ++ + +A VV +
Sbjct: 135 SAIGLMGLHGNKHVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFM 179
>gi|7485449|pir||T05525 hypothetical protein F13M23.180 - Arabidopsis thaliana
(fragment) >gi|4455247|emb|CAB36746.1| (AL035523) putative protein
[Arabidopsis thaliana]
Length = 140
Frame 1 hits (HSPs): ____________________________________________
__________________________________________________
Database sequence: | | | | 140
0 50 100
Plus Strand HSPs:
Score = 106 (37.3 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 33/126 (26%), Positives = 59/126 (46%), Frame = +1
Query: 169 LRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTSFQFFVITMALVGGYLVLSL 348
+R+ I AA+ + M T+ + + FEA Y ++F++ V V + +L
Sbjct: 20 MRVLTIGAAMASMWVMITNREVASVYG--IAFEAKYSYSSAFRYLVYAQIAVCAATLFTL 77
Query: 349 PFSFVAIIRPHAAGPRLFLIILDTVFLTLATASGASAAAKVYLAHNGNQDSNWLAICNQF 528
++ +A+ R F +L T LT +A A A A+ Y+ GN+ + WL IC
Sbjct: 78 VWACLAVRRRGLVFALFFFDLLTT--LTAISAFSA-AFAEGYVGKYGNKQAGWLPICGYV 134
Query: 529 GDFCAQ 546
+C++
Sbjct: 135 HGYCSR 140
>gi|7485479|pir||T04237 hypothetical protein F14M19.110 - Arabidopsis thaliana
>gi|4539301|emb|CAB39604.1| (AL049480) putative mitochondrial
protein [Arabidopsis thaliana] >gi|7269434|emb|CAB79438.1|
(AL161564) putative mitochondrial protein [Arabidopsis thaliana]
Length = 618
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | 618
0 150 300 450 600
Plus Strand HSPs:
Score = 110 (38.7 bits), Expect = 0.011, P = 0.011
Identities = 31/145 (21%), Positives = 63/145 (43%), Frame = +1
Query: 160 DFILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTSFQFFVITMALVGGYLV 339
+ ILRL + L + +G QT + S+ + + + +V Y +
Sbjct: 8 EVILRLCIVFFLLLTSCLIGLDSQTKEI--AYIHKNVSFRYLLALEAELYIDVVVAAYNL 65
Query: 340 LSLPFSFVAIIRPHAAGPRLFLIILDTVFLTLATASGASAAAKVYLAHNGNQDSNWLAIC 519
+ L + + + P+ F +LD + A ++AA L G+++ W+ C
Sbjct: 66 VQLGLGWYNV-EQKTSNPKWFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSRELQWMKWC 124
Query: 520 NQFGDFCAQTSSAVVSSFVAVVVLV 594
+F FC Q SA++ +++A ++V
Sbjct: 125 YKFTRFCFQMGSAIILNYIAAALMV 149
>gi|7485055|pir||B71431 hypothetical protein - Arabidopsis thaliana
>gi|2245000|emb|CAB10420.1| (Z97341) LET1 like protein [Arabidopsis
thaliana] >gi|7268394|emb|CAB78686.1| (AL161544) LET1 like protein
[Arabidopsis thaliana]
Length = 578
Frame 1 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | 578
0 150 300 450
Plus Strand HSPs:
Score = 107 (37.7 bits), Expect = 0.023, P = 0.023
Identities = 39/164 (23%), Positives = 66/164 (40%), Frame = +1
Query: 106 VLTAPPRPGGWKKGVAIMD-------FILRLGAIAAALGAAATMGTSDQTLPFFTQFFQF 264
+L A PGG++ + ++D +LR AL A + T + FT +
Sbjct: 110 ILGAEICPGGYRSKMKLIDRRMRLTELLLRCSISVFALLALILVVTDTEVKLIFT--IKK 167
Query: 265 EASYDSFTSFQFFVITMALVGGYLVLSLPFSFVAIIRPHA--AGPRLFLIIL-DTVFLTL 435
A Y + F V+ + Y +L V ++ + P + D L
Sbjct: 168 TAKYTDMKAVVFLVVANGIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYL 227
Query: 436 ATASGASAAAKVYLAHNGNQDSNWLAICNQFGDFCAQTSSAVVSSF 573
A+ A+ A +A G +D W+ +C +G FC Q + V S+F
Sbjct: 228 NVAAIAATAESGVIAREGEEDLQWMRVCTMYGKFCNQMAIGVSSAF 273
>gi|9758278|dbj|BAB08777.1| (AB005232) gb|AAD50013.1~gene_id:MBG8.25~similar to
unknown protein [Arabidopsis thaliana]
Length = 194
Frame 1 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | 194
0 50 100 150
Plus Strand HSPs:
Score = 97 (34.1 bits), Expect = 0.048, P = 0.047
Identities = 34/136 (25%), Positives = 61/136 (44%), Frame = +1
Query: 154 IMDFILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTSFQFFVITMALVGGY 333
I+D LRL + ++ T+ ++ P + Y+S ++ V A+ Y
Sbjct: 31 IIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNL-----EYNSIMGLKYMVGVSAISAIY 85
Query: 334 LVLSLPFSFVAIIRPHAAGPRLFLIILDTVFLTLATASGASAAAKVYLAHNGNQDSNWLA 513
+LS S+V + A LF I D V + T S A A VYL + G++ W
Sbjct: 86 ALLSTVSSWVTCLVSKAW---LFFIP-DQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSE 141
Query: 514 ICNQFGDFCAQTSSAV 561
+C+ + +C++ + A+
Sbjct: 142 MCSSYPHYCSKLTIAL 157
>gi|421047|pir||A47307 heat-stable enterotoxin 1, EAST1 - Escherichia coli
>gi|290422|gb|AAA20885.1| (L11241) heat-stable enterotoxin 1
[Escherichia coli]
Length = 38
Frame 3 hits (HSPs): _________________________________________
Annotated Domains: ________
__________________________________________________
Database sequence: | | | 38
0 20
__________________
Annotated Domains:
PROSITE CYTOCHROME_C: Cytochrome c family heme-b 24..29
__________________
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 6.8, P = 1.0
Identities = 11/31 (35%), Positives = 15/31 (48%), Frame = +3
Query: 408 YLRHCVSDFGHC*WCFSCCQSLLGTQWEPRL 500
Y+R S + C WC + C S G +P L
Sbjct: 6 YIRRPASSYASCIWCTTACASCHGRTTKPSL 36
>gi|1477961|gb|AAB36317.1| (S81691) enterotoxin 1 [Escherichia coli,
enterotoxigenic, H10707-P, CFA-I+ plasmid pCS1, Peptide Plasmid, 38
aa] >gi|5453435|gb|AAD43571.1|AF160993_1 (AF160993) heat-stable
enterotoxin 1 [Escherichia coli]
>gi|5453437|gb|AAD43572.1|AF160994_1 (AF160994) heat-stable
enterotoxin 1 [Escherichia coli]
>gi|5453439|gb|AAD43573.1|AF160995_1 (AF160995) heat-stable
enterotoxin 1 [Escherichia coli]
>gi|5453441|gb|AAD43574.1|AF160996_1 (AF160996) heat-stable
enterotoxin 1 [Escherichia coli]
>gi|5453443|gb|AAD43575.1|AF160997_1 (AF160997) heat-stable
enterotoxin 1 [Escherichia coli]
>gi|5453445|gb|AAD43576.1|AF160998_1 (AF160998) heat-stable
enterotoxin 1 [Escherichia coli]
>gi|5453453|gb|AAD43580.1|AF161002_1 (AF161002) heat-stable
enterotoxin 1 [Escherichia coli] >gi|7649755|dbj|BAA94855.1|
(AB042002) heat-stable enterotoxin 1 [Escherichia coli]
>gi|7649757|dbj|BAA94856.1| (AB042003) heat-stable enterotoxin 1
[Escherichia coli] >gi|7649812|dbj|BAA94857.1| (AB042004)
heat-stable enterotoxin 1 [Escherichia coli]
>gi|7649814|dbj|BAA94858.1| (AB042005) heat-stable enterotoxin 1
[Escherichia coli] >gi|7649816|dbj|BAA94859.1| (AB042006)
heat-stable enterotoxin 1 [Escherichia coli]
>gi|10567526|gb|AAG18472.1|AF143819_1 (AF143819) heat-stable toxin
1; EAST1 [Escherichia coli]
Length = 38
Frame 3 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | 38
0 20
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 6.8, P = 1.0
Identities = 11/31 (35%), Positives = 15/31 (48%), Frame = +3
Query: 408 YLRHCVSDFGHC*WCFSCCQSLLGTQWEPRL 500
Y+R S + C WC + C S G +P L
Sbjct: 6 YIRRPASSYASCIWCATACASCHGRTTKPSL 36
>gi|5453451|gb|AAD43579.1|AF161001_1 (AF161001) heat-stable enterotoxin 1
[Escherichia coli]
Length = 38
Frame 3 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | 38
0 20
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 6.8, P = 1.0
Identities = 11/31 (35%), Positives = 15/31 (48%), Frame = +3
Query: 408 YLRHCVSDFGHC*WCFSCCQSLLGTQWEPRL 500
Y+R S + C WC + C S G +P L
Sbjct: 6 YIRRPTSSYASCIWCATACASCHGRTTKPSL 36
>gi|182753|gb|AAA35857.1| (M16282) unidentified open reading frame [Homo
sapiens]
Length = 80
Frame 2 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | | 80
0 20 40 60
Plus Strand HSPs:
Score = 61 (21.5 bits), Expect = 8.8, P = 1.0
Identities = 13/38 (34%), Positives = 20/38 (52%), Frame = +2
Query: 464 PKFTWHTMGTKTRTGLPYATNLETSVHRPVQQWCHPSL 577
P F+WH G++T L + +T +R +W H SL
Sbjct: 4 PSFSWHPYGSQTCCCLTFPVVHKTWGNRETLKWGHLSL 41
>gi|5453447|gb|AAD43577.1|AF160999_1 (AF160999) heat-stable enterotoxin 1
[Escherichia coli] >gi|5453449|gb|AAD43578.1|AF161000_1 (AF161000)
heat-stable enterotoxin 1 [Escherichia coli]
Length = 38
Frame 3 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | 38
0 20
Plus Strand HSPs:
Score = 61 (21.5 bits), Expect = 8.8, P = 1.0
Identities = 11/31 (35%), Positives = 15/31 (48%), Frame = +3
Query: 408 YLRHCVSDFGHC*WCFSCCQSLLGTQWEPRL 500
Y+R S + C WC + C S G +P L
Sbjct: 6 YIRRPTSSYASCIWCATVCASCHGRTTKPSL 36
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.350 0.154 0.634
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.352 0.153 0.589
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.324 0.134 0.396
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.350 0.153 0.578
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.334 0.140 0.448
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.352 0.155 0.611
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 197 197 10. 76 3 12 22 0.092 35
31 0.10 38
+2 0 197 197 10. 76 3 12 22 0.092 35
31 0.10 38
+1 0 198 198 10. 76 3 12 22 0.093 35
31 0.10 38
-1 0 198 198 10. 76 3 12 22 0.093 35
31 0.10 38
-2 0 197 197 10. 76 3 12 22 0.092 35
31 0.10 38
-3 0 197 197 10. 76 3 12 22 0.092 35
31 0.10 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 29
No. of states in DFA: 597 (59 KB)
Total size of DFA: 246 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 204.21u 1.20s 205.41t Elapsed: 00:00:37
Total cpu time: 204.27u 1.23s 205.50t Elapsed: 00:00:37
Start: Thu Jan 17 04:06:48 2002 End: Thu Jan 17 04:07:25 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000