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UniSTS:46811 Links
DXS8041
Homo sapiens chromosome X, loci CHDS3 and PLAC1, polymorphic
Pan troglodytes chromosome X

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:GCAAGACTCCGTCTCAAATAATAAC
Reverse primer:TTCCTGCTACCTGCAATTCC
PCR product size:144-164 (bp), Homo sapiens
GenBank Accession:Z52951

   Homo sapiens
Name: DXS8041
Also known as: AFMa342zf5 GDB:608871 HSA342ZF5 SHGC-21241
Polymorphism info: on genetic map

Cross References Help
Gene GeneID:10761
 Symbol:PLAC1
 Description:placenta-specific 1
 Position:Xq26
Gene GeneID:387573
 Symbol:CHDS3
 Description:Coronary heart disease, susceptibility to, 3
 Position:Xq23-q26

Mapping InformationHelp
DXS8041 Sequence Map: Chr X|HuRef Map Viewer
  Position: 123102583-123102739 (bp)
 
DXS8041 Sequence Map: Chr X Map Viewer
  Position: 133531399-133531554 (bp)
 
DXS8041 Sequence Map: Chr X|Celera Map Viewer
  Position: 134090552-134090707 (bp)
 
AFMa342zf5 Genethon Map: Chr X Map Viewer
  Position: 151.70 (cM)
 
AFMa342zf5 Marshfield Map: Chr X Map Viewer
  Position: 82.84 (cM)
 
SHGC-21241 TNG Map: Chr X Map Viewer
  Position: 28566 (cR50000)
  Lod score: 4.5
  Reference Interval: 105
 
AFMa342zf5 GeneMap99-G3 Map: Chr X Map Viewer
  Position: 4166 (cR10000)
  Lod score: F
  Reference Interval: DXS1047-DXS998

Electronic PCR results Help
Genomic (5 of 8)[Show All Hits]
Z52951.1 101 .. 256 (156 bp)  
AC004383.1 154261 .. 154416 (156 bp)  
CH003518.1 99104643 .. 99104799 (157 bp)  
CH471107.2 14296127 .. 14296282 (156 bp)  
CM000274.1 134090552 .. 134090707 (156 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AL590875.9 208829 .. 208980 (152 bp)  
 
Working Draft phase 2 (from GenBank HTGS division) (1)
AC004387.2 99138 .. 99293 (156 bp)  
 
Whole Genome Shotgun sequences (3)
AADC01148181.1 244578 .. 244734 (157 bp)  
AADB02037286.1 547025 .. 547180 (156 bp)  
ABBA01042457.1 3366 .. 3522 (157 bp)  
 

   Pan troglodytes
Name: DXS8041
Polymorphism info:  
Mapping InformationHelp
DXS8041 Sequence Map: Chr X Map Viewer
  Position: 134048166-134048289 (bp)

Electronic PCR results Help
Genomic (1)
CM000336.1 134048166 .. 134048289 (124 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01122841.1 227 .. 350 (124 bp)  
AACZ02222150.1 5737 .. 5860 (124 bp)  
 

 

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