Os06g0153900 (Os06g0153900)

NCBI

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Finding cDNAs

UGID:373164 UniGene Os.21058 Oryza sativa (rice) Os06g0153900

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Os06g0153900 (Os06g0153900)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001056843.1	Os06g0153900	O. sativa	100.0	233
NP_850403.1	thiol methyltransferase, putative	A. thaliana	70.7	198

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	leaf; stem; root; unspecified tissue; mixed; callus; other; panicle

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AK101884.1	Oryza sativa Japonica Group cDNA clone:J033070L07, full insert sequence	P
AK061306.1	Oryza sativa Japonica Group cDNA clone:006-301-H08, full insert sequence	P
NM_001063378.1	Oryza sativa (japonica cultivar-group) Os06g0153900 (Os06g0153900) mRNA, complete cds	P

EST sequences (10 of 38) [Show all sequences]

AA753674.1	Clone 97BS0163	other		A
BQ907656.1	Clone P014A12	leaf		A
BQ908900.1	Clone T016H06	leaf		PA
CA754080.1	Clone BR040009000_PLATE_B03_18_027.ab1	root		P
CB629174.1	Clone OSIIEb05D13	leaf	5' read	P
CB629175.1	Clone OSIIEb05D13	leaf	3' read	P
CB629176.1	Clone OSIIEb05D14	leaf	5' read
CB647113.1	Clone OSJNEb09O08	leaf	5' read	P
CB671863.1	Clone OSJNEe05K03	leaf	3' read	P
CB676119.1	Clone OSJNEe12D06	leaf	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria