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Finding cDNAs
UGID:909164     UniGene Hs.518417     Homo sapiens (human)   STX6 Order cDNA clone, Links
Clone 23570 mRNA sequence (STX6)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001114975.1 PREDICTED: similar to syntaxin 6 M. mulatta 100.0 254
XP_514037.2 PREDICTED: syntaxin 6 isoform 2 P. troglodytes 100.0 254
NP_005810.1 syntaxin 6 H. sapiens 100.0 254
NP_067408.1 syntaxin 6 M. musculus 99.6 254
NP_001085148.1 hypothetical protein LOC432227 X. laevis 85.4 253
NP_001017879.1 syntaxin 6 D. rerio 84.0 255
NP_995814.1 Syntaxin 6 CG7736-PD, isoform D D. melanogaster 54.8 322

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; testis; mixed; kidney; eye; muscle; pancreas; embryonic tissue; skin; esophagus; larynx; bone marrow; nerve; mouth; uterus; heart; ovary; thymus; bone; pharynx; placenta; lung; intestine; lymph node; connective tissue; blood; ear; bladder; liver; prostate; mammary gland; trachea; thyroid; spleen; cervix; spinal cord; salivary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q25.3
UniSTS entry: Chr 1 SHGC-76008
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

NM_005819.4 Homo sapiens syntaxin 6 (STX6), mRNA PA
CR541873.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0133D for gene STX6, syntaxin 6; complete cds, without stopcodon P
CR541856.1 Homo sapiens full open reading frame cDNA clone RZPDo834F0632D for gene STX6, syntaxin 6; complete cds, incl. stopcodon P
CR612118.1 full-length cDNA clone CS0DB002YB07 of Neuroblastoma Cot 10-normalized of Homo sapiens (human)
CR610805.1 full-length cDNA clone CS0DI027YO10 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR609438.1 full-length cDNA clone CS0DL005YM12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) P
CR608098.1 full-length cDNA clone CS0DC014YC09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR591752.1 full-length cDNA clone CS0DC027YE24 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
BC009944.2 Homo sapiens syntaxin 6, mRNA (cDNA clone MGC:12919 IMAGE:4122224), complete cds PA
AK312440.1 Homo sapiens cDNA, FLJ92788, Homo sapiens syntaxin 6 (STX6), mRNA P
AK299063.1 Homo sapiens cDNA FLJ57566 complete cds, highly similar to Syntaxin-6 P
AJ002078.1 Homo sapiens mRNA for syntaxin 6, complete CDS P
AF038202.1 Homo sapiens clone 23570 mRNA sequence A

EST sequences (314)

AA975205.1 Clone IMAGE:1555438 kidney 3' read A
AI000344.1 Clone IMAGE:1637014 kidney 3' read
AI024932.1 Clone IMAGE:1639300 testis 3' read A
AI073357.1 Clone IMAGE:1679398 skin 3' read A
AI090548.1 Clone IMAGE:1691553 heart 3' read
AI128954.1 Clone IMAGE:1663188 skin 3' read A
AI129004.1 Clone IMAGE:1663280 skin 3' read A
AI142729.1 Clone IMAGE:1634202 mixed 3' read A
AI144442.1 Clone IMAGE:1708873 heart 3' read
CB053812.1 Clone IMAGE:3291029 uncharacterized tissue 3' read
CB053813.1 Clone IMAGE:3291029 uncharacterized tissue 5' read
BX100212.1 Clone IMAGp998A021962_;_IMAGE:795529 testis
CB131343.1 Clone L13SNU387-5-F09 liver 5' read
AI278493.1 Clone IMAGE:1892615 placenta 3' read
AI083723.1 Clone IMAGE:1750482 brain 3' read
AI241392.1 Clone IMAGE:1850393 mixed 3' read A
AI339089.1 Clone IMAGE:1933979 mixed 3' read P
R38287.1 Clone IMAGE:23570 brain 3' read A
R39232.1 Clone IMAGE:23392 brain 3' read
AI357294.1 Clone IMAGE:2001476 lymph node 3' read
AI358490.1 Clone IMAGE:2005695 pancreas 3' read A
AI394427.1 Clone IMAGE:2111583 mixed 3' read
CB216038.1 Clone IMAGE:5937571 uterus 5' read
CB218373.1 Clone IMAGE:5795345 bone 5' read
CB218372.1 Clone IMAGE:5795345 bone 3' read
AI439917.1 Clone IMAGE:2135114 lymph node 3' read A
R52889.1 Clone IMAGE:41768 brain 5' read
AI492907.1 Clone IMAGE:2029570 kidney 3' read
AI535693.1 prostate 3' read
AI535716.1 prostate 3' read
AI535755.1 prostate 3' read
AI400727.1 Clone IMAGE:2115868 mixed 3' read
AI401353.1 Clone IMAGE:2113567 mixed 3' read A
AI627488.1 Clone IMAGE:2285373 kidney 3' read A
AI627503.1 Clone IMAGE:2285379 kidney 3' read A
AI627735.1 Clone IMAGE:2279540 uterus 3' read A
AI651124.1 Clone IMAGE:2304138 uncharacterized tissue 3' read
R43669.1 Clone IMAGE:22733 brain 3' read A
AI656068.1 Clone IMAGE:2243515 uncharacterized tissue 3' read
AI699974.1 Clone IMAGE:2242778 uncharacterized tissue 3' read
CB250396.1 Clone UI-CF-FN0-age-c-09-0-UI lung 3' read A
AI740832.1 Clone IMAGE:2366066 mixed 3' read A
AI765774.1 Clone IMAGE:2400001 kidney 3' read A
BX280773.1 Clone IMAGp998C1911628_;_IMAGE:5248842 brain P
BX283398.1 Clone IMAGp958F161415_;_IMAGE:4644111 intestine
AI884823.1 Clone IMAGE:2431669 brain 3' read A
AI916089.1 Clone IMAGE:2393202 intestine 3' read
AI917496.1 Clone IMAGE:2237995 uncharacterized tissue 3' read
AI942237.1 Clone IMAGE:2461341 kidney 3' read A
AI638839.1 Clone IMAGE:2242531 uncharacterized tissue 3' read
Z42051.1 Clone c-06h09 brain
BX332008.2 Clone CS0DC006YK12 uncharacterized tissue 5' read P
BX344777.2 Clone CS0DB002YB07 uncharacterized tissue 5' read
BX352741.2 Clone CS0DB002YB07 uncharacterized tissue 3' read
BX352742.2 Clone CS0DB002YB07 uncharacterized tissue 5' read
BX403067.2 Clone CS0DB002YB07 uncharacterized tissue 3' read
BX419935.2 Clone CS0DF022YA10 brain 5' read P
AI962598.1 Clone IMAGE:2475059 uncharacterized tissue 3' read A
BX456866.2 Clone CS0CAP004YD17 thymus 5' read
BX463992.2 Clone CS0DF022YA10 brain 3' read
BX463993.2 Clone CS0DF022YA10 brain 5' read P
CD365180.1 Clone UI-H-FT2-bjn-j-02-0-UI lung 3' read A
AW008580.1 Clone IMAGE:2502547 brain 3' read A
AW013889.1 Clone IMAGE:2708663 uncharacterized tissue 3' read A
BX475062.1 Clone DKFZp686F13174 muscle 5' read P
BX475069.1 Clone DKFZp686G12174 muscle 5' read P
AW025741.1 Clone IMAGE:2516113 uncharacterized tissue 3' read A
BX488314.1 Clone DKFZp686H11269 muscle 5' read P
AW043915.1 Clone IMAGE:2554535 mixed 3' read A
AW044572.1 Clone IMAGE:2555148 mixed 3' read
AW068974.1 Clone HBMSC_cr39e11 bone marrow 3' read A
AW078976.1 Clone IMAGE:2576905 kidney 3' read A
Z44267.1 Clone c-1wf02 brain
Z40225.1 Clone c-1wf02 brain 3' read
AW090657.1 Clone IMAGE:2591166 brain 3' read
AW104308.1 Clone IMAGE:2603595 mixed 3' read A
CF135675.1 Clone IMAGE:3090446 lymph node 5' read P
CF137125.1 Clone IMAGE:3092002 lymph node 5' read P
AW188205.1 Clone IMAGE:2664813 mixed 3' read A
BP431460.1 Clone LEU4090_8_E7
F10321.1 Clone c-3dd02 brain 3' read A
AW264865.1 Clone IMAGE:2752736 lung 3' read A
AW270898.1 Clone IMAGE:2768792 kidney 3' read A
AW271758.1 Clone IMAGE:2769962 kidney 3' read A
F13155.1 Clone c-3je06 brain
F10757.1 Clone c-3je06 brain 3' read
F13279.1 Clone c-3lb10 brain
F10878.1 Clone c-3lb10 brain 3' read A
CK005479.1 Clone IMAGE:30722044 brain 5' read
CK024009.1 Clone IMAGE:30722487 brain 5' read
R67264.1 Clone IMAGE:41768 brain 3' read A
BX955915.1 Clone DKFZp781K0574 uncharacterized tissue 5' read P
AW843854.1 intestine P
AW844046.1 intestine P
AW874186.1 Clone IMAGE:3126255 thyroid 3' read
CN483917.1 Clone hw39h07 eye 5' read
CN293562.1 embryonic tissue 5' read P
CN293561.1 embryonic tissue 5' read P
AW960786.1 uncharacterized tissue
AW975420.1 uncharacterized tissue
AW978216.1 uncharacterized tissue P
BE005150.1 mammary gland
BE217875.1 Clone IMAGE:3174988 lung 3' read A
BE218204.1 Clone IMAGE:3175438 lung 3' read
CV027866.1 mixed 5' read P
CR744580.1 Clone IMAGp998J102639_;_IMAGE:1055721 testis 5' read
BP214994.1 Clone CCR02475 brain 5' read P
BP298275.1 Clone MPC05322 uncharacterized tissue 5' read P
BP352175.1 Clone T3R07053 esophagus 5' read P
BP278997.1 Clone KGR03566 brain 5' read P
H42139.1 Clone IMAGE:182440 mammary gland 5' read
H42140.1 Clone IMAGE:182440 mammary gland 3' read
BE672116.1 Clone IMAGE:3222314 uncharacterized tissue 3' read
CX761779.1 Clone IMAGE:7770011 embryonic tissue 3' read P
BE712464.1 pharynx P
CX868110.1 Clone IMAGE:7473494 embryonic tissue 3' read A
CX868191.1 Clone IMAGE:7473494 embryonic tissue 5' read
BE766470.1 brain
DN601564.1 Clone IMAGE:7482223 embryonic tissue 5' read
DN990778.1 Clone TC108182 brain 5' read P
BE893126.1 Clone IMAGE:3922348 skin 5' read P
BE893304.1 Clone IMAGE:3922037 skin 5' read
BP425009.1 Clone HIE08669r intestine 3' read
BF035815.1 Clone IMAGE:3862017 ovary 5' read
BF105135.1 Clone IMAGE:4042499 kidney 5' read P
BF089103.1 larynx
CR995224.1 Clone RZPDp9016I2117 uncharacterized tissue 5' read P
AU124682.1 Clone NT2RM4000388 testis 5' read
AU128288.1 Clone NT2RP2003150 testis 5' read P
BF216014.1 Clone IMAGE:4093936 brain 5' read
BF304875.1 Clone IMAGE:4122224 muscle 5' read P
BF448961.1 Clone IMAGE:4090994 nerve 3' read
H63639.1 Clone IMAGE:207188 mixed 5' read
DA038018.1 Clone BGGI12000450 uncharacterized tissue 5' read P
DA038227.1 Clone BGGI12000736 uncharacterized tissue 5' read P
DA306581.1 Clone BRHIP2023184 brain 5' read
BF674205.1 Clone IMAGE:4273520 prostate 5' read P
DA085908.1 Clone BRACE2040406 brain 5' read
DA170463.1 Clone BRAMY2032500 brain 5' read
DA242744.1 Clone BRAWH3040797 brain 5' read P
DA322579.1 Clone BRHIP3016294 brain 5' read P
DA349932.1 Clone BRSSN2012353 brain 5' read
DA212312.1 Clone BRAWH3001751 brain 5' read P
DA023633.1 Clone ASTRO2006007 brain 5' read P
DA324569.1 Clone BRHIP3019149 brain 5' read P
DA174736.1 Clone BRAMY2037920 brain 5' read P
DA110482.1 Clone BRACE3027516 brain 5' read P
DA335598.1 Clone BRHIP3035632 brain 5' read P
DA263555.1 Clone BRCAN2016300 brain 5' read
DA153271.1 Clone BRAMY2011728 brain 5' read P
DA310006.1 Clone BRHIP2027804 brain 5' read
DA298933.1 Clone BRHIP2012807 brain 5' read P
DA311923.1 Clone BRHIP3000736 brain 5' read
DA161598.1 Clone BRAMY2021850 brain 5' read
DA155816.1 Clone BRAMY2014861 brain 5' read
DA457319.1 Clone CTONG3002876 mouth 5' read P
DA692713.1 Clone NT2NE2012714 5' read
DA498976.1 Clone FCBBF3012523 brain 5' read P
DA550834.1 Clone HCHON1000011 connective tissue 5' read
DA649957.1 Clone MESAN2003308 kidney 5' read P
DA511479.1 Clone FCBBF3028577 brain 5' read P
DA512054.1 Clone FCBBF4000490 brain 5' read
DA440762.1 Clone CTONG2009470 mouth 5' read P
DA515281.1 Clone FEBRA2003313 brain 5' read P
DA444210.1 Clone CTONG2014315 mouth 5' read
DA491333.1 Clone FCBBF3002767 brain 5' read
DA557066.1 Clone HCHON2007646 connective tissue 5' read
DA557131.1 Clone HCHON2007723 connective tissue 5' read P
AW615123.1 Clone IMAGE:2951154 uncharacterized tissue 3' read
BF057223.1 Clone IMAGE:3444632 uncharacterized tissue 3' read A
DA492404.1 Clone FCBBF3004099 brain 5' read
DA447331.1 Clone CTONG2018684 mouth 5' read
DA453930.1 Clone CTONG2026973 mouth 5' read P
DA519685.1 Clone FEBRA2009295 brain 5' read
DA375873.1 Clone BRTHA2007317 brain 5' read P
DA526663.1 Clone FEBRA2018562 brain 5' read
DA611356.1 Clone IMR322009421 brain 5' read
DA690820.1 Clone NT2NE2010341 5' read
AU148495.1 Clone NT2RM4000388 testis 3' read
DA836637.1 Clone PLACE6002341 placenta 5' read P
DA954634.1 Clone SPLEN2033001 spleen 5' read
DB041971.1 Clone TESTI2029187 testis 5' read
DA989013.1 Clone SYNOV4000195 connective tissue 5' read
DA727134.1 Clone NT2RI3009297 testis 5' read P
DB004458.1 Clone TBAES2007202 mammary gland 5' read
DA734178.1 Clone NT2RP2004619 testis 5' read
DA768797.1 Clone OCBBF2000998 brain 5' read
DA702059.1 Clone NT2RI2004866 5' read P
DA807660.1 Clone OCBBF3023360 brain 5' read
DA744385.1 Clone NT2RP7008921 testis 5' read P
DA711703.1 Clone NT2RI2017636 5' read P
BF530893.1 Clone IMAGE:4215284 brain 5' read
DA746229.1 Clone NT2RP7011227 testis 5' read P
DA786075.1 Clone OCBBF2023058 brain 5' read
DA792660.1 Clone OCBBF2032263 brain 5' read
DA787136.1 Clone OCBBF2024581 brain 5' read
BF513194.1 Clone IMAGE:3070173 uncharacterized tissue 3' read A
BF573629.1 Clone IMAGE:4251889 skin 5' read
BF589090.1 Clone IMAGE:3266971 mixed 3' read
DA802373.1 Clone OCBBF3006786 brain 5' read P
DA829276.1 Clone PLACE1002716 placenta 5' read
DA730979.1 Clone NT2RM4001457 testis 5' read
DB258126.1 Clone UTERU2014559 uterus 5' read
DB148238.1 Clone THYMU3024125 thymus 5' read P
DB121803.1 Clone THYMU2030549 thymus 5' read
DB109366.1 Clone THYMU2012063 thymus 5' read
DB123312.1 Clone THYMU2032353 thymus 5' read
DB202401.1 Clone TRACH2012533 trachea 5' read P
DB363009.1 Clone NT2RM4001457 testis 3' read
DB141017.1 Clone THYMU3014249 thymus 5' read
DB129624.1 Clone THYMU2040032 thymus 5' read
DB220147.1 Clone TRACH3010394 trachea 5' read P
DB365452.1 Clone NT2RP2003150 testis 3' read A
DB374029.1 Clone PLACE1002716 placenta 3' read A
H88014.1 Clone IMAGE:252758 ear 5' read
H88237.1 Clone IMAGE:252758 ear 3' read
BF813957.1 intestine P
BF832532.1 larynx
BF973273.1 Clone IMAGE:4330892 uterus 5' read P
BF940943.1 Clone IMAGE:3174713 brain 3' read
N22099.1 Clone IMAGE:253957 ear 3' read A
BF900769.1 blood
BF900779.1 blood P
BF918123.1 uterus P
DB531498.1 Clone H023014I19 brain 3' read
DB465033.1 Clone H023014I19 brain 5' read P
BG054817.1 Clone IMAGE:3441375 brain 3' read
DB522089.1 Clone H013074H11 testis 3' read
DB539522.1 Clone H023049D01 brain 3' read A
BG256961.1 Clone IMAGE:4478818 uncharacterized tissue 5' read P
BG260404.1 Clone IMAGE:4479272 bladder 5' read
BG260855.1 Clone IMAGE:4480548 bladder 5' read
AL526403.3 Clone CS0DC014YC09 uncharacterized tissue 3' read
AL526444.3 Clone CS0DC014YC09 uncharacterized tissue 5' read P
AL527857.3 Clone CS0DC027YE24 uncharacterized tissue 5' read P
AL528699.3 Clone CS0DD001YJ12 uncharacterized tissue 5' read P
AL545354.3 Clone CS0DI027YO10 placenta 5' read P
AL556927.3 Clone CS0DK012YE13 cervix 5' read P
AL560849.3 Clone CS0DL005YM12 uncharacterized tissue 5' read P
AL562510.3 Clone CS0DC011YO16 uncharacterized tissue 3' read
AL562997.3 Clone CS0DC027YE24 uncharacterized tissue 3' read P
AL571114.3 Clone CS0DI027YO10 placenta 3' read P
AL582196.3 Clone CS0DL005YM12 uncharacterized tissue 3' read P
BG332647.1 Clone IMAGE:4550364 lung 5' read P
BG391820.1 Clone IMAGE:4537398 uncharacterized tissue 5' read
BG403423.1 Clone IMAGE:4526329 bladder 5' read
AL589380.1 Clone DKFZp451M2115 spinal cord 5' read
BG468353.1 Clone IMAGE:4644111 intestine 5' read
BG480801.1 Clone IMAGE:4653413 placenta 5' read P
DT219890.1 brain
N50679.1 Clone IMAGE:280836 brain 3' read
N52259.1 Clone IMAGE:284362 brain 3' read
BG827385.1 Clone IMAGE:4901286 muscle 5' read P
BI094484.1 Clone IMAGE:4994175 placenta 5' read
BJ990758.1 Clone hkmt-1226 liver 5' read P
BJ990759.1 Clone hkmt-1226 liver 3' read
DC369517.1 Clone NT2RI3003909 testis 5' read P
DC333951.1 Clone BRHIP3017866 brain 5' read
BI870396.1 Clone IMAGE:5405603 liver 5' read
BI914492.1 Clone IMAGE:5246469 brain 5' read
BI917353.1 Clone IMAGE:5248842 brain 5' read P
BM013610.1 Clone IMAGE:5415309 mammary gland 5' read
BM450161.1 Clone IMAGE:5528202 skin 5' read P
BM551560.1 Clone IMAGE:5548042 skin 5' read
BM675536.1 Clone UI-E-EJ1-ajg-h-13-0-UI eye 3' read A
BM675695.1 Clone UI-E-EJ1-ajg-m-02-0-UI eye 3' read A
BM711473.1 Clone UI-E-DX1-agv-o-03-0-UI eye 5' read P
BM804985.1 Clone IMAGE:5725749 ovary 5' read
BQ004369.1 Clone IMAGE:5841122 connective tissue 3' read A
BQ006272.1 Clone IMAGE:5845523 connective tissue 3' read A
BQ225769.1 Clone IMAGE:6062492 skin 5' read A
BQ301509.1 thyroid P
BQ336269.1 blood
BQ420812.1 Clone IMAGE:6016172 uncharacterized tissue 5' read
BQ671607.1 Clone IMAGE:6254861 salivary gland 5' read P
BQ688781.1 Clone IMAGE:6249345 pancreas 5' read
BG117770.1 Clone IMAGE:4445293 liver 5' read
BG118925.1 Clone IMAGE:4442552 liver 5' read
BG121084.1 Clone IMAGE:4450922 liver 5' read
BM931670.1 Clone UI-E-EJ1-ajg-m-02-0-UI eye 5' read A
BM931734.1 Clone UI-E-EJ1-ajg-h-13-0-UI eye 5' read A
BQ954021.1 Clone IMAGE:6464880 uterus 5' read P
BU429568.1 Clone IMAGE:3064508 lymph node 5' read
BU179596.1 Clone IMAGE:6023678 lung 5' read P
BU507481.1 Clone IMAGE:6501421 uterus 5' read P
C00121.1 uncharacterized tissue
AA148128.1 Clone IMAGE:588466 intestine 5' read
BU626097.1 Clone UI-H-FG1-bgq-m-19-0-UI bone 3' read A
BU633621.1 Clone UI-H-FL1-bgv-c-06-0-UI bone 3' read A
AA195374.1 Clone IMAGE:665484 mixed 3' read
AA195501.1 Clone IMAGE:665483 mixed 5' read
BU660697.1 Clone cl63b09 blood 5' read
BU685759.1 Clone UI-CF-DU1-adm-j-05-0-UI lung 3' read A
BU687412.1 Clone UI-CF-EC1-adv-l-15-0-UI lung 3' read A
BU688313.1 Clone UI-CF-EC1-aea-a-04-0-UI lung 3' read A
BU853515.1 Clone IMAGE:6620410 testis 5' read
BU902578.1 Clone IMAGE:6526409 uterus 5' read P
BU928945.1 Clone IMAGE:6654982 brain 5' read
T75195.1 Clone IMAGE:22733 brain 5' read
CA427338.1 Clone UI-H-FH1-bfi-m-03-0-UI bone 3' read A
T75458.1 Clone IMAGE:23392 brain 5' read
CA449492.1 Clone UI-H-EI1-ayt-b-06-0-UI connective tissue 3' read A
T77306.1 Clone IMAGE:23570 brain 5' read
AA337478.1 uterus 5' read
AA337908.1 uterus 5' read P
AA459657.1 Clone IMAGE:795529 testis 3' read A
AA459780.1 Clone IMAGE:795529 testis 5' read
AA522643.1 Clone IMAGE:982288 bone
AA508523.1 Clone IMAGE:957746 prostate
AA532794.1 Clone IMAGE:925288 intestine 3' read
AA620939.1 Clone IMAGE:1055648 testis 3' read
AA653116.1 Clone IMAGE:1126171 kidney 3' read
AA715406.1 Clone IMAGE:1233425 bone
AA805570.1 Clone IMAGE:1341253 lymph node 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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