LOCUS XM_858378 3596 bp mRNA linear MAM 30-AUG-2005
DEFINITION PREDICTED: Canis familiaris similar to zinc finger CCCH-type domain
containing 7, transcript variant 5 (LOC479848), mRNA.
ACCESSION XM_858378
VERSION XM_858378.1 GI:73958913
KEYWORDS .
SOURCE Canis lupus familiaris (dog)
ORGANISM Canis lupus familiaris
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae;
Canis.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from an annotated genomic sequence
(NW_876321) using gene prediction method: GNOMON, supported by mRNA
and EST evidence.
Also see:
Documentation of NCBI's Annotation Process
FEATURES Location/Qualifiers
source 1..3596
/organism="Canis lupus familiaris"
/mol_type="mRNA"
/sub_species="familiaris"
/db_xref="taxon:9615"
/chromosome="6"
/breed="boxer"
gene 1..3596
/gene="LOC479848"
/note="Derived by automated computational analysis using
gene prediction method: GNOMON. Supporting evidence
includes similarity to: 2 mRNAs, 136 ESTs, 11 Proteins"
/db_xref="GeneID:479848"
CDS 13..2334
/gene="LOC479848"
/codon_start=1
/product="similar to zinc finger CCCH-type domain
containing 7 isoform 5"
/protein_id="XP_863471.1"
/db_xref="GI:73958914"
/db_xref="GeneID:479848"
/translation="MSSVSEERRKRQQNIKEGLQFIQSPLSYPGTQEQYAVYLRALVR
NLFNEGNDVYREHDWNNSISQYTEALNIAGYAKSEEIVIPKEIIEKLHINRIACYSNM
GFHDQVLEECDAVLSLNASNCKALYRKSKALNDLGRYREAYDSVAKCSLAVPQDEHVI
KLTQELAQKLGFKIRKAYVRAELSLKSVPGDGATKALNCSVEDIEPDLLTPRQEAVPA
VSVPASSFSHQVGSELASVPIMPLTSILPLQVEESPLPSTVLANGGKTPFAMPEAFVD
DGDMVLGDEIDDLLDSAPEANETVMPSALVRGALPAASVPPSIPFSASLLGTLPIGAR
YAPPPSFSELYPPLTTSLEDFCSSLNSFSMSDSKRDLSTSTSREGTALSGSNSSLLLM
NGPGNLFASESFLGISSHPRNDFGNFFGSAVTKPPSSVTPRHPLEGTHELRQACQICF
VKSGPKLMDFTYHANIDHKCKKDILIGRIKNVDDKSWKKIRPRPTKTNYEGPYYICKD
VAAEEECRYSGHCTFAYCQEEIDIWTLERKGAFSREAFFGGNGKINLTVFKLLQEHLG
EFIFLCEKCFDHKPRMISKRNKDNSTSCSHPVTKHEFEDNKCLVHILRETTVKYSKIR
SLRGQCQLDLCRHEVRYGCLREDECFYAHSLVELKVWILQNETGISHDAIAQESKRYW
QNLEANVPGAQVLGNQIMPGSLNMKIKFVCAQCLRNGQVIEPDKNRKYCSAKARHSWT
RDRRAMRVMSIEPVQSYCFWEKMSICWELFLCS"
STS 3420..3572
/gene="LOC479848"
/standard_name="RH65161"
/db_xref="UniSTS:84528"
STS 3422..3578
/gene="LOC479848"
/standard_name="RH76661"
/db_xref="UniSTS:92790"
ORIGIN
1 gtgtggggta acatgtccag tgtgtccgag gagagaagaa aaaggcagca gaacattaag
61 gaaggactgc agtttataca gtcaccactg tcatatccag gaacacagga acaatatgcg
121 gtatatttac gtgctcttgt gagaaatctt tttaatgaag gcaatgatgt ttatcgggaa
181 catgattgga acaactcaat aagccagtac acagaagctt tgaatatagc tggttatgca
241 aagtctgaag aaattgtcat ccctaaagaa ataattgaaa aactgcatat aaatcgtatt
301 gcttgctatt ctaatatggg tttccatgat caagttttag aagagtgtga tgcagtcctc
361 agtttaaatg ccagtaactg caaagctctg tatcggaaat ctaaggctct caatgactta
421 ggaagataca gagaggctta tgactctgta gcaaagtgct ccttggcagt gcctcaggat
481 gaacatgtaa taaaactaac tcaagaacta gctcagaaat tgggatttaa gataagaaaa
541 gcatatgtta gggccgagct ctcattaaaa tcagttcctg gggatggggc taccaaggct
601 ttgaactgtt ctgtggaaga tatcgagcca gatttattaa ctccgaggca ggaagcagtt
661 cccgctgtct ctgtacctgc atccagtttc tctcaccaag ttggaagtga gctggcctca
721 gttcctatca tgcccttaac ttctattttg ccactgcaag tggaagagag ccctctgcca
781 tcaacagtgt tggcaaacgg aggaaagact ccctttgcta tgccagaagc ttttgtggat
841 gatggagata tggtccttgg ggatgaaata gatgaccttc ttgattcggc ccctgaagcc
901 aatgaaaccg ttatgccatc agcgttagtc agaggagccc tcccggcagc cagcgtcccc
961 cctagcatac ccttctccgc atctctgtta ggcaccctgc ccattggtgc gaggtatgct
1021 cctccaccct ccttctcaga gctgtatcca cctttgacta catccttaga agatttctgc
1081 tcttctttaa attcattttc aatgagtgat tccaagcgag atctgtccac ctcaacttct
1141 agagagggaa cagcgcttag cggcagtaat tcttcccttt tacttatgaa tggaccaggc
1201 aacttatttg cttctgagag tttcctggga atttcaagcc accccagaaa tgactttgga
1261 aacttttttg gaagtgcagt tactaaacca ccttcatcag tgaccccaag acatcccctc
1321 gaaggaaccc atgaactgag acaagcttgt cagatctgtt ttgtaaaatc aggccctaag
1381 ttaatggatt ttacttacca tgctaatatt gatcataaat gtaagaagga tattttaatt
1441 ggtagaataa agaatgttga cgataaatca tggaaaaaaa tacgtccaag accaacaaaa
1501 acaaattatg agggacctta ttatatatgt aaagatgttg ctgctgagga ggaatgtaga
1561 tactcaggcc actgcacgtt cgcttattgc caagaagaga tagacatatg gacgctggag
1621 cggaaagggg ctttcagcag agaggctttc tttggtggca atggaaagat caacctcacc
1681 gtattcaaac ttctccaaga gcaccttgga gagtttatat tcctttgtga gaaatgtttt
1741 gatcataagc ctagaatgat aagtaaaaga aataaagata attctacttc ttgttctcac
1801 ccggttacaa agcatgagtt tgaagacaat aagtgccttg tccacatttt gcgagagaca
1861 acagtaaaat actccaaaat acgttctctt cgtggtcagt gtcagctgga tttatgtcga
1921 catgaggttc gatatggctg tttaagggaa gatgagtgct tttatgcgca cagtcttgta
1981 gaacttaaag tctggatatt gcaaaatgaa acaggtatct cacatgatgc tattgctcaa
2041 gaatcgaagc gatattggca aaatttggaa gcgaacgtac ctggagctca ggtacttggc
2101 aatcaaataa tgcctggatc tcttaatatg aagataaaat ttgtgtgtgc tcaatgtctg
2161 agaaatggtc aagtcattga accagacaaa aacagaaaat attgtagtgc aaaagcaagg
2221 cactcgtgga ccagagatcg gcgtgcgatg agagtgatgt ccatcgaacc tgtgcaatca
2281 tattgcttct gggaaaaaat gtcaatatgt tgggaactgt tcctttgctc atagtcctga
2341 ggaacgggaa gtgtggactt acatgaagga gaatgggata caagatatgg agcagtttta
2401 tgaactctgg ctaaagagtc aaaaaaacga aaaaagtgat gatgtagcaa gtcagtcaaa
2461 caaggaaaac ggaaaacaaa ttcacatgcc gacagattac gccgaagtga ccgtgaactt
2521 tcactgctgg atgtgtggga agaactgtaa cagtgagaag cagtggcaag gccacatctc
2581 ttcagagaag cacaaagaga aggtttttca caccgaggat gatcagtact gctggcagca
2641 ccgctttcca acagggtatt ttagtatttg tgataggtat acaaatggca cctgcacaga
2701 aggaaacggc tgtaaatttg cacatgggaa tgctgagctc catgagtggg aagaaagaag
2761 ggatgcccta aagatgaagc tcaacaaagc aagaaaagat cacttaatcg ccccaaatga
2821 taatgacttt ggaaaatata gttttttgtt taaagattta aactaatatg ctggctttta
2881 tgtatgtaac ctaatcaaag cattgaccag aaaaattgaa agtgttgtaa ggcacgtagc
2941 agaggagctg cagattttct gcttgtattg gcgtctttcg tacctcctga gcagcaaccc
3001 acagtaggta ggaaaacggg ctgtttaaca ggtctggcca tgctctcatg gcaccattgg
3061 catcatatgg cgaagtgacc gctacccagt tgccatctgt tgaacagact tttggatgaa
3121 gtgtgttggg gaagaggatg aggttatgtc taagacgact ccttgagttg gtccttcaga
3181 taagaaccat catggtgaga gaatagacac ttgcactagg ggtcagaata cactatggat
3241 gaaattcttc acatgtttta aatggaacga atttgtttaa tataataaag tttgctactt
3301 atctgtacgt aggttgctaa aaaggatttt cttaactcag attttaagcc aaataaccat
3361 ttaacactag tacatgttaa atggggtatt tttctgtatt tgtatgtttc actatcataa
3421 gggaactaag gataatgtgc attgagaata ttttgaaaaa taatcagttg actcaaattt
3481 tatttcttgg tcttttgctg tttaaatgat gattttgaaa gattacactt gtactgttgg
3541 tattgtgtag tgtatggacc aatattgcct gtaataaaga ttttatatat agatgt
//