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Sample GSM24238 Query DataSets for GSM24238
Status Public on May 27, 2005
Title WLOVA1
Sample type RNA
 
Channel 1
Source Name Ref Pool 2
Organism(s) Mus musculus
Extracted molecule total RNA
 
Channel 2
Source Name WLOVA1
Organism(s) Mus musculus
Extracted molecule total RNA
 
 
Description Total RNA from whole lung
no amplification-cDNA
OVA
 
Submission date May 27, 2004
Contact name Michael E. Salazar
Phone (415) 514-4371
URL http://arrays.ucsf.edu
Organization name University of California, San Francisco
Department
Lab Functional Genomics Core Laboratories
Street address 1550 Fourth Street, RM 545
City San Francisco
State/province CA
ZIP/Postal code 94158
Country USA
 
Platform ID GPL1196
Series (1)
GSE1438 Differential Gene Expression due to direct effects of IL-13 on Airway Epithelial Cells

Data table header descriptions
ID_REF
X
Y
Dia.
F635 Median
F635 Mean
F635 SD
B635 Median
B635 Mean
B635 SD
% > B635+1SD
% > B635+2SD
F635 % Sat.
F532 Median
F532 Mean
F532 SD
B532 Median
B532 Mean
B532 SD
% > B532+1SD
% > B532+2SD
F532 % Sat.
VALUE log ratio (log2 of PRE_VALUE)
Ratio of Means (635/532)
Median of Ratios (635/532)
Mean of Ratios (635/532)
Ratios SD (635/532)
Rgn Ratio (635/532)
Rgn R™ (635/532)
F Pixels
B Pixels
Sum of Medians
Sum of Means
Log Ratio (635/532)
F635 Median - B635
F532 Median - B532
F635 Mean - B635
F532 Mean - B532
F635 Total Intensity
F532 Total Intensity
SNR 635
SNR 532
Flags
Normalize
PRE_VALUE Ratio of Medians (635/532)

Data table
ID_REF X Y Dia. F635 Median F635 Mean F635 SD B635 Median B635 Mean B635 SD % > B635+1SD % > B635+2SD F635 % Sat. F532 Median F532 Mean F532 SD B532 Median B532 Mean B532 SD % > B532+1SD % > B532+2SD F532 % Sat. VALUE Ratio of Means (635/532) Median of Ratios (635/532) Mean of Ratios (635/532) Ratios SD (635/532) Rgn Ratio (635/532) Rgn R™ (635/532) F Pixels B Pixels Sum of Medians Sum of Means Log Ratio (635/532) F635 Median - B635 F532 Median - B532 F635 Mean - B635 F532 Mean - B532 F635 Total Intensity F532 Total Intensity SNR 635 SNR 532 Flags Normalize PRE_VALUE
1 1730 13230 110 7729 7684 1076 183 381 1605 100 100 0 10467 10516 1316 215 1123 5892 100 8 0 -0.4422223 0.728 0.719 0.727 1.149 0.696 0.892 80 612 17798 17802 -0.442 7546 10252 7501 10301 614721 841254 4.55 1.594 0 0 0.736
2 1930 13230 110 8590 8810 1348 176 185 75 100 100 0 5311 5698 1882 210 224 81 100 100 0 0.7215913 1.573 1.622 1.611 1.255 1.54 0.865 80 590 13515 14122 0.722 8414 5101 8634 5488 704837 455853 115 67.58 0 0 1.649
3 2130 13230 110 7845 7877 913 179 194 85 100 100 0 8112 8074 1073 207 226 93 100 100 0 -0.0439433 0.979 0.97 0.981 1.141 0.965 0.966 80 590 15571 15565 -0.044 7666 7905 7698 7867 630160 645900 90.388 84.387 0 0 0.97
4 2330 13230 110 16263 16051 1955 187 195 76 100 100 0 13833 13332 1973 205 216 84 100 100 0 0.2387873 1.209 1.177 1.215 1.152 1.189 0.964 80 590 29704 28991 0.238 16076 13628 15864 13127 1284079 1066563 208.632 156.143 0 0 1.18
5 2530 13230 110 2969 2964 460 179 188 71 100 100 0 2301 2283 317 214 226 89 100 100 0 0.4189993 1.346 1.347 1.346 1.166 1.357 0.95 80 590 4877 4854 0.419 2790 2087 2785 2069 237150 182634 39.099 23.112 0 0 1.337
6 2730 13230 110 11755 11755 1693 171 187 88 100 100 0 10381 10456 1275 207 228 169 100 100 0 0.1877683 1.13 1.116 1.127 1.142 1.137 0.961 80 598 21758 21833 0.187 11584 10174 11584 10249 940379 836446 131.455 60.521 0 0 1.139
7 2940 13230 110 1435 1477 337 169 182 92 100 100 0 1269 1259 295 202 216 80 100 100 0 0.2473203 1.237 1.261 1.25 1.304 1.228 0.867 80 598 2333 2365 0.247 1266 1067 1308 1057 118176 100729 14.076 13.038 0 0 1.187
8 3140 13220 100 623 618 130 167 177 84 100 100 0 314 327 89 193 218 322 5 0 0 1.9141823 3.366 3.47 3.521 2.005 4.037 0.269 80 504 577 585 1.914 456 121 451 134 49426 26187 5.25 0.339 0 0 3.769
9 3330 13220 110 2865 3039 1033 162 175 116 100 100 0 2073 3806 6247 187 241 729 100 91 0 0.5190393 0.795 1.424 1.23 1.721 0.279 0.453 80 598 4589 6496 0.519 2703 1886 2877 3619 243146 304499 24.69 4.89 0 0 1.433
10 3530 13210 90 1532 1503 262 164 187 144 100 100 0 792 805 195 193 208 86 100 100 0 1.1915633 2.188 2.076 2.278 1.441 2.273 0.81 52 412 1967 1951 1.191 1368 599 1339 612 78180 41847 9.139 6.942 0 0 2.284
11 3730 13220 110 6140 6052 839 161 178 146 100 100 0 3514 3539 553 194 203 84 100 100 0 0.8487983 1.761 1.763 1.77 1.161 1.768 0.952 80 598 9299 9236 0.849 5979 3320 5891 3345 484153 283129 40.233 39.714 0 0 1.801
12 3920 13220 110 6983 6920 1042 170 191 147 100 100 0 5320 5116 944 206 225 97 100 100 0 0.4135943 1.375 1.386 1.389 1.166 1.356 0.966 80 588 11927 11660 0.414 6813 5114 6750 4910 553565 409274 45.776 50.423 0 0 1.332
13 4130 13220 110 1159 1171 235 156 174 165 100 100 0 508 530 127 196 211 80 98 95 0 1.6848193 3.039 3.236 3.188 1.615 4.083 0.482 80 564 1315 1349 1.685 1003 312 1015 334 93652 42390 6.042 3.988 0 0 3.215
14 4330 13220 80 2916 2632 898 150 159 61 100 100 0 2338 2176 620 180 193 70 100 100 0 0.3583963 1.243 1.252 1.188 1.327 1.284 0.956 52 340 4924 4478 0.358 2766 2158 2482 1996 136874 113169 40.541 28.329 0 0 1.282
15 4520 13210 90 870 867 178 157 169 79 100 100 0 940 927 208 177 193 88 100 100 0 -0.0985063 0.947 0.959 0.956 1.477 0.939 0.781 52 412 1476 1460 -0.098 713 763 710 750 45075 48215 8.835 8.341 0 0 0.934
16 4730 13220 80 413 422 107 155 167 85 96 82 0 570 566 110 179 188 73 100 96 0 -0.5994623 0.69 0.698 0.666 1.712 0.728 0.663 52 340 649 654 -0.6 258 391 267 387 21927 29429 3 5.178 0 0 0.66
17 4930 13220 110 9555 9412 1362 152 167 76 100 100 0 4778 4632 943 180 192 73 100 100 0 1.0321013 2.08 2.081 2.113 1.227 2.082 0.949 80 588 14001 13712 1.032 9403 4598 9260 4452 752956 370520 121.645 60.822 0 0 2.045
18 5120 13210 80 383 384 116 160 173 74 88 73 0 299 304 79 180 192 77 67 32 0 0.9061213 1.806 1.879 1.965 2.863 2.167 0.139 52 332 342 348 0.906 223 119 224 124 19953 15785 2.851 1.455 0 0 1.874
19 5330 13220 120 7916 7108 2327 160 174 68 100 100 0 5987 5237 1862 191 203 78 98 97 0 0.4200783 1.377 1.378 1.451 1.427 1.36 0.975 120 679 13552 11994 0.42 7756 5796 6948 5046 852991 628392 101.971 64.538 0 0 1.338
20 5510 13210 80 334 340 140 184 207 137 61 15 0 231 234 66 222 254 283 0 0 0 4.0589233 13 5.032 4.07 2.719 4.887 0.071 52 318 159 168 4.059 150 9 156 12 17704 12156 0.971 -0.071 0 0 16.667

Total number of rows: 18240

Table truncated, full table size 3711 Kbytes.




Supplementary data files not provided

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