NCBI Protein banner
My NCBIMy NCBI help
[Sign In] [Register]
PubMed Nucleotide Protein Genome Structure PMC Taxonomy OMIM Books
 Search   for    
 Display   Show
  Range: from   to  Features:    
1:  NP_634836Reports  phenylalanyl-tRNA...[gi:21228914] BLink, Conserved Domains, Links
LOCUS       NP_634836                545 aa            linear   BCT 20-JUL-2008
DEFINITION  phenylalanyl-tRNA synthetase subunit beta [Methanosarcina mazei
            Go1].
ACCESSION   NP_634836
VERSION     NP_634836.1  GI:21228914
DBSOURCE    REFSEQ: accession NC_003901.1
KEYWORDS    .
SOURCE      Methanosarcina mazei Go1
  ORGANISM  Methanosarcina mazei Go1
            Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
            Methanosarcinaceae; Methanosarcina.
REFERENCE   1  (residues 1 to 545)
  AUTHORS   Deppenmeier,U., Johann,A., Hartsch,T., Merkl,R., Schmitz,R.A.,
            Martinez-Arias,R., Henne,A., Wiezer,A., Baumer,S., Jacobi,C.,
            Bruggemann,H., Lienard,T., Christmann,A., Bomeke,M., Steckel,S.,
            Bhattacharyya,A., Lykidis,A., Overbeek,R., Klenk,H.P.,
            Gunsalus,R.P., Fritz,H.J. and Gottschalk,G.
  TITLE     The genome of Methanosarcina mazei: evidence for lateral gene
            transfer between bacteria and archaea
  JOURNAL   J. Mol. Microbiol. Biotechnol. 4 (4), 453-461 (2002)
   PUBMED   12125824
REFERENCE   2  (residues 1 to 545)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 545)
  CONSRTM   NCBI Microbial Genomes Annotation Project
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JUN-2001) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from AAM32508.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Methanosarcina mazei Go1"
                     /strain="Go1"
                     /db_xref="taxon:192952"
     Protein         1..545
                     /product="phenylalanyl-tRNA synthetase subunit beta"
                     /EC_number="6.1.1.20"
                     /calculated_mol_wt=61318
     Region          1..544
                     /region_name="pheT"
                     /note="phenylalanyl-tRNA synthetase subunit beta;
                     Reviewed; PRK09616"
                     /db_xref="CDD:104058"
     Region          93..>229
                     /region_name="B3_4"
                     /note="B3/4 domain; cl01340"
                     /db_xref="CDD:120577"
     Region          281..341
                     /region_name="B5"
                     /note="tRNA synthetase B5 domain; pfam03484"
                     /db_xref="CDD:112309"
     Region          359..540
                     /region_name="PheRS_beta_core"
                     /note="Phenylalanyl-tRNA synthetase (PheRS) beta chain
                     core domain. PheRS belongs to class II aminoacyl-tRNA
                     synthetases (aaRS) based upon its structure. While class
                     II aaRSs generally aminoacylate the 3'-OH ribose of the
                     appropriate tRNA,  PheRS is an...; cd00769"
                     /db_xref="CDD:29814"
     Site            order(361..362,369,372,376,378,380..382,403..406,417,431,
                     440,445,447,449,473)
                     /site_type="other"
                     /note="dimer interface"
                     /db_xref="CDD:29814"
     Site            376..382
                     /site_type="other"
                     /note="motif 1"
                     /db_xref="CDD:29814"
     Site            423..426
                     /site_type="other"
                     /note="motif 3"
                     /db_xref="CDD:29814"
     Site            447..449
                     /site_type="other"
                     /note="motif 2"
                     /db_xref="CDD:29814"
     CDS             1..545
                     /gene="pheT"
                     /locus_tag="MM_2812"
                     /coded_by="complement(NC_003901.1:3374674..3376311)"
                     /note="catalyzes a two-step reaction, first charging a
                     phenylalanine molecule by linking its carboxyl group to
                     the alpha-phosphate of ATP, followed by transfer of the
                     aminoacyl-adenylate to its tRNA; forms a tetramer of
                     alpha(2)beta(2); binds two magnesium ions per tetramer;
                     type 1 subfamily"
                     /transl_table=11
                     /db_xref="GeneID:1481154"
ORIGIN      
        1 mpvitlhyed lekltgtdke tiikrvpmig adiervedey vdieffpdrp dlysvegaar
       61 amrgfldlet glpeyeikpy kvsisvsedi lkirpflgca vvrgvkftss sikslmdlqe
      121 dlhwglgrnr kkvsigvhdl knvkppfrym avdpgfefvp ldytekmsmt eilekhpkgt
      181 rfahlvsgfe kypiildadd nvlsfppiin gtltsvteet tdlfidvtgl geavytalni
      241 vvtalaergg eiefvrvirp ggeelvlpdl epeerllttg evksligmel pveeivkqle
      301 rmrfgacald ketvevrvpa yradilhnyd lvediakgyg yenikvkipe tytagmshpi
      361 slmrapvnei mvglgyyevm pftltsekvn fenmcrektd dvtyvlhpis edqtmlrttv
      421 lpnlleilal nqhrelpqki fefgevvsne ttgqhvaavs ihpqanftev yevvdafmre
      481 mmlsyevkes kdpaflegrr advyvngkkl gvfgelqpev iskfslgyav vgfeldlndl
      541 igkni
//

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH

 

Last update: Mon, 12 Jan 2009 Rev. 149544