BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= TF1036
(345 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|150007663|ref|YP_001302406.1| iron(III) ABC transporter ... 466 e-130
gi|154492943|ref|ZP_02032569.1| hypothetical protein PARMER... 463 e-129
gi|53713482|ref|YP_099474.1| iron(III) ABC transporter puta... 460 e-128
gi|156860226|gb|EDO53657.1| hypothetical protein BACUNI_029... 457 e-127
gi|150005590|ref|YP_001300334.1| iron(III) ABC transporter ... 443 e-123
gi|34540469|ref|NP_904948.1| iron compound ABC transporter,... 368 e-100
gi|150010248|ref|YP_001304991.1| iron(III) ABC transporter ... 268 3e-70
gi|156858590|gb|EDO52021.1| hypothetical protein BACUNI_045... 267 8e-70
gi|21673250|ref|NP_661315.1| iron(III) ABC transporter, per... 263 8e-69
gi|148657196|ref|YP_001277401.1| transport system permease ... 261 4e-68
gi|75812444|ref|YP_320063.1| transport system permease prot... 259 1e-67
gi|68552679|ref|ZP_00592066.1| transport system permease pr... 257 7e-67
gi|88601590|ref|YP_501768.1| transport system permease prot... 257 7e-67
gi|124002394|ref|ZP_01687247.1| permease protein of iron(II... 256 1e-66
gi|154491849|ref|ZP_02031475.1| hypothetical protein PARMER... 251 4e-65
gi|17231524|ref|NP_488072.1| permease protein of iron(III) ... 249 2e-64
gi|67917542|ref|ZP_00511148.1| transport system permease pr... 248 3e-64
gi|76260847|ref|ZP_00768475.1| transport system permease pr... 242 3e-62
gi|150004597|ref|YP_001299341.1| iron(III) ABC transporter ... 241 4e-62
gi|86133177|ref|ZP_01051759.1| iron(III) ABC transporter, p... 237 7e-61
gi|149372082|ref|ZP_01891352.1| iron(III) ABC transporter, ... 236 1e-60
gi|91216390|ref|ZP_01253357.1| iron(III) ABC transporter, p... 236 1e-60
gi|86142722|ref|ZP_01061161.1| permease protein of iron(III... 235 4e-60
gi|150025520|ref|YP_001296346.1| Probable ABC-type iron(III... 232 3e-59
gi|113938276|ref|ZP_01424145.1| transport system permease p... 232 3e-59
gi|126661897|ref|ZP_01732896.1| transport system permease p... 232 3e-59
gi|50841596|ref|YP_054823.1| transporter (putative iron (II... 230 1e-58
gi|120435438|ref|YP_861124.1| ABC-type transporter permease... 229 1e-58
gi|156742222|ref|YP_001432351.1| transport system permease ... 229 1e-58
gi|88803366|ref|ZP_01118892.1| iron(III) ABC transporter, p... 229 2e-58
gi|146297848|ref|YP_001192439.1| transport system permease ... 229 2e-58
gi|86132362|ref|ZP_01050957.1| permease protein of iron(III... 226 1e-57
gi|88711967|ref|ZP_01106054.1| permease protein of iron(III... 226 1e-57
gi|126646695|ref|ZP_01719205.1| permease protein of iron(II... 225 3e-57
gi|83857626|ref|ZP_00951154.1| iron(III) ABC transporter, p... 223 1e-56
gi|60680710|ref|YP_210854.1| putative iron transport-relate... 222 3e-56
gi|88806449|ref|ZP_01121966.1| permease protein of iron(III... 221 4e-56
gi|53712511|ref|YP_098503.1| putative iron(III) ABC transpo... 221 5e-56
gi|89891466|ref|ZP_01202971.1| ABC-type iron (III) transpor... 218 6e-55
gi|156109620|gb|EDO11365.1| hypothetical protein BACOVA_032... 216 2e-54
gi|153808821|ref|ZP_01961489.1| hypothetical protein BACCAC... 212 3e-53
gi|53714315|ref|YP_100307.1| iron(III) ABC transporter perm... 209 3e-52
gi|29347361|ref|NP_810864.1| Fe3+ ABC transporter, permease... 207 6e-52
gi|34540448|ref|NP_904927.1| iron compound ABC transporter,... 207 6e-52
gi|29347509|ref|NP_811012.1| Fe3+ ABC transporter, permease... 207 7e-52
gi|68231781|ref|ZP_00570943.1| transport system permease pr... 202 2e-50
gi|126700619|ref|YP_001089516.1| putative iron ABC transpor... 197 6e-49
gi|118579686|ref|YP_900936.1| transport system permease pro... 196 2e-48
gi|15895707|ref|NP_349056.1| Hemin permease [Clostridium ac... 195 4e-48
gi|153810498|ref|ZP_01963166.1| hypothetical protein RUMOBE... 193 1e-47
gi|156107102|gb|EDO08847.1| hypothetical protein BACOVA_047... 191 5e-47
gi|28211050|ref|NP_781994.1| iron(III) dicitrate transport ... 187 9e-46
gi|42526260|ref|NP_971358.1| iron compound ABC transporter,... 185 3e-45
gi|106895384|ref|ZP_01362480.1| transport system permease p... 184 5e-45
gi|139436918|ref|ZP_01771078.1| Hypothetical protein COLAER... 155 3e-36
gi|153853697|ref|ZP_01995053.1| hypothetical protein DORLON... 155 3e-36
gi|145953444|ref|ZP_01802452.1| hypothetical protein CdifQ_... 154 6e-36
gi|91773082|ref|YP_565774.1| ABC Fe3+-siderophore transport... 152 3e-35
gi|77361989|ref|YP_341563.1| Hemin ABC-transport system per... 152 4e-35
gi|150400552|ref|YP_001324318.1| transport system permease ... 151 5e-35
gi|90409211|ref|ZP_01217322.1| heme/hemin ABC transporter, ... 148 5e-34
gi|126652593|ref|ZP_01724757.1| YvrB [Bacillus sp. B14905] ... 147 8e-34
gi|16120619|ref|NP_403932.1| hemin transport system permeas... 146 2e-33
gi|152970718|ref|YP_001335827.1| vtamin B12-transporter per... 145 3e-33
gi|89211194|ref|ZP_01189569.1| transport system permease pr... 145 4e-33
gi|124485909|ref|YP_001030525.1| hypothetical protein Mlab_... 144 6e-33
gi|123440714|ref|YP_001004706.1| hemin transport system per... 144 6e-33
gi|146311387|ref|YP_001176461.1| transport system permease ... 144 1e-32
gi|77962548|ref|ZP_00826367.1| COG0609: ABC-type Fe3+-sider... 143 1e-32
gi|77973335|ref|ZP_00828884.1| COG0609: ABC-type Fe3+-sider... 143 1e-32
gi|77957437|ref|ZP_00821493.1| COG0609: ABC-type Fe3+-sider... 143 2e-32
gi|72162784|ref|YP_290441.1| FecCD-family membrane transpor... 142 3e-32
gi|146311394|ref|YP_001176468.1| transport system permease ... 142 4e-32
gi|77978157|ref|ZP_00833590.1| COG0609: ABC-type Fe3+-sider... 141 6e-32
gi|20092441|ref|NP_618516.1| iron ABC transporter, permease... 140 1e-31
gi|62423984|ref|ZP_00379137.1| COG0609: ABC-type Fe3+-sider... 140 1e-31
gi|157083189|gb|ABV12867.1| hypothetical protein CKO_01738 ... 140 1e-31
gi|124004901|ref|ZP_01689744.1| transport system permease p... 140 1e-31
gi|121998135|ref|YP_001002922.1| transport system permease ... 140 1e-31
gi|2738774|gb|AAB94548.1| HutC [Vibrio cholerae] 140 2e-31
gi|150420985|gb|EDN13270.1| putative hemin ABC transporter,... 139 2e-31
gi|153934272|ref|YP_001383347.1| iron chelate uptake ABC tr... 139 3e-31
gi|74311969|ref|YP_310388.1| vitamin B12 transport permease... 139 3e-31
gi|116214970|ref|ZP_01481109.1| hypothetical protein VchoR_... 139 3e-31
gi|148378965|ref|YP_001253506.1| iron(III) dicitrate ABC tr... 139 4e-31
gi|121586685|ref|ZP_01676469.1| hemin ABC transporter, perm... 139 4e-31
gi|153212347|ref|ZP_01948129.1| hemin ABC transporter, perm... 138 4e-31
gi|153938502|ref|YP_001390325.1| iron chelate uptake ABC tr... 138 4e-31
gi|156934282|ref|YP_001438198.1| hypothetical protein ESA_0... 138 4e-31
gi|153801391|ref|ZP_01955977.1| hemin ABC transporter, perm... 138 5e-31
gi|125622833|gb|EAZ51151.1| hemin ABC transporter, permease... 138 6e-31
gi|15601668|ref|NP_233299.1| hemin ABC transporter, permeas... 137 8e-31
gi|20808280|ref|NP_623451.1| ABC-type cobalamin/Fe3+-sidero... 137 9e-31
gi|116221899|ref|ZP_01487301.1| hypothetical protein VchoV5... 137 9e-31
gi|20089997|ref|NP_616072.1| iron ABC transporter, permease... 137 1e-30
gi|116750166|ref|YP_846853.1| transport system permease pro... 137 1e-30
gi|116190969|ref|ZP_01480704.1| hypothetical protein VchoM_... 137 1e-30
gi|150397540|ref|YP_001328007.1| transport system permease ... 137 1e-30
gi|150398886|ref|YP_001322653.1| transport system permease ... 137 1e-30
gi|88601501|ref|YP_501679.1| transport system permease prot... 136 2e-30
gi|38233234|ref|NP_939001.1| Iron-related transport system ... 136 2e-30
gi|56413673|ref|YP_150748.1| vtamin B12-transporter permeas... 136 2e-30
gi|73669376|ref|YP_305391.1| iron(III) dicitrate transport ... 136 2e-30
gi|5006425|gb|AAD37494.1|AF109162_2 HmuU [Corynebacterium d... 136 2e-30
gi|20977619|gb|AAM28271.1| BhuU [Bordetella avium] >gi|1154... 136 2e-30
gi|118590143|ref|ZP_01547546.1| putative iron ABC transport... 136 2e-30
gi|16764691|ref|NP_460306.1| vtamin B12-transporter permeas... 136 2e-30
gi|156744284|ref|YP_001434413.1| transport system permease ... 136 2e-30
gi|28210665|ref|NP_781609.1| putative iron(III) dicitrate t... 136 2e-30
gi|50841568|ref|YP_054795.1| ABC transporter [Propionibacte... 136 2e-30
gi|124521694|ref|ZP_01696561.1| transport system permease p... 135 3e-30
gi|50120774|ref|YP_049941.1| hemin transport system permeas... 135 3e-30
gi|16760554|ref|NP_456171.1| vtamin B12-transporter permeas... 135 3e-30
gi|104783667|ref|YP_610165.1| ABC transporter, permease com... 135 3e-30
gi|15966183|ref|NP_386536.1| PUTATIVE HEMIN TRANSPORT SYSTE... 135 3e-30
gi|106893910|ref|ZP_01361033.1| transport system permease p... 135 4e-30
gi|82777059|ref|YP_403408.1| vitamin B12 transport permease... 135 5e-30
gi|157085140|gb|ABV14818.1| hypothetical protein CKO_03742 ... 135 5e-30
gi|21323155|dbj|BAB97783.1| ABC-type transporter, permease ... 135 6e-30
gi|11907952|gb|AAG41410.1|AF304009_3 permease [Corynebacter... 134 6e-30
gi|62179929|ref|YP_216346.1| vtamin B12-transporter permeas... 134 7e-30
gi|21228170|ref|NP_634092.1| Iron(III) dicitrate transport ... 134 7e-30
gi|145294508|ref|YP_001137329.1| hypothetical protein cgR_0... 134 7e-30
gi|73668706|ref|YP_304721.1| iron ABC transporter, permease... 134 7e-30
gi|148657668|ref|YP_001277873.1| transport system permease ... 134 8e-30
gi|19551636|ref|NP_599638.1| ABC-type transporter, permease... 134 9e-30
gi|84705172|ref|ZP_01018595.1| hemin ABC transporter permea... 134 9e-30
gi|116253439|ref|YP_769277.1| transmembrane permease compon... 134 1e-29
gi|121542625|ref|ZP_01674346.1| ABC-type Fe3+-siderophore t... 134 1e-29
gi|124530855|ref|ZP_01701360.1| transport system permease p... 133 1e-29
gi|76796307|ref|ZP_00778672.1| transport system permease pr... 133 2e-29
gi|37526526|ref|NP_929870.1| hypothetical protein plu2635 [... 133 2e-29
gi|149910542|ref|ZP_01899181.1| vtamin B12-transporter perm... 133 2e-29
gi|20089829|ref|NP_615904.1| hemin permease [Methanosarcina... 133 2e-29
gi|118050350|ref|ZP_01518900.1| transport system permease p... 133 2e-29
gi|29827142|ref|NP_821776.1| ABC transporter iron(III)/side... 132 2e-29
gi|109646556|ref|ZP_01370460.1| transport system permease p... 132 2e-29
gi|88601560|ref|YP_501738.1| transport system permease prot... 132 3e-29
gi|118068730|ref|ZP_01536980.1| transport system permease p... 132 3e-29
gi|119875041|ref|ZP_01642163.1| transport system permease p... 132 3e-29
gi|92114543|ref|YP_574471.1| transport system permease prot... 132 3e-29
gi|116753745|ref|YP_842863.1| transport system permease pro... 132 3e-29
gi|13277334|emb|CAC34394.1| HmuU protein [Rhizobium legumin... 132 4e-29
gi|73668013|ref|YP_304028.1| Fe(III) dicitrate ABC transpor... 132 4e-29
gi|148378304|ref|YP_001252845.1| iron(III) transport system... 132 4e-29
gi|75195784|ref|ZP_00705854.1| COG4139: ABC-type cobalamin ... 131 6e-29
gi|153938043|ref|YP_001389671.1| iron chelate uptake ABC tr... 131 6e-29
gi|20092717|ref|NP_618792.1| hemin ABC transporter, permeas... 131 7e-29
gi|18310199|ref|NP_562133.1| probable ABC transporter [Clos... 131 8e-29
gi|26247962|ref|NP_754002.1| vtamin B12-transporter permeas... 131 8e-29
gi|75177391|ref|ZP_00697480.1| COG4139: ABC-type cobalamin ... 131 8e-29
gi|87122087|ref|ZP_01077971.1| hemin ABC transporter, perme... 130 8e-29
gi|20090992|ref|NP_617067.1| Fe(III) dicitrate ABC transpor... 130 9e-29
gi|16129667|ref|NP_416226.1| vitamin B12 transporter subuni... 130 9e-29
gi|24112893|ref|NP_707403.1| vtamin B12-transporter permeas... 130 9e-29
gi|118443298|ref|YP_878158.1| iron (III) dicitrate transpor... 130 1e-28
gi|157080300|gb|ABV20008.1| vitamin B12 import system perme... 130 1e-28
gi|83590309|ref|YP_430318.1| transport system permease prot... 130 1e-28
gi|123442456|ref|YP_001006435.1| putative vitamin B12 trans... 130 1e-28
gi|73669751|ref|YP_305766.1| iron(III) ABC transporter, per... 130 1e-28
gi|77980152|ref|ZP_00835567.1| COG4139: ABC-type cobalamin ... 130 1e-28
gi|110641833|ref|YP_669563.1| vitamin B12 transport system ... 130 2e-28
gi|63033842|gb|AAY28216.1| FtrD [Streptomyces hygroscopicus] 130 2e-28
gi|124486532|ref|YP_001031148.1| hypothetical protein Mlab_... 130 2e-28
gi|77959229|ref|ZP_00823251.1| COG4139: ABC-type cobalamin ... 129 2e-28
gi|110805479|ref|YP_688999.1| vitamin B12 transport permeas... 129 2e-28
gi|110802229|ref|YP_698438.1| ABC transporter, permease pro... 129 2e-28
gi|15802123|ref|NP_288145.1| vtamin B12-transporter permeas... 129 2e-28
gi|75513789|ref|ZP_00736165.1| COG4139: ABC-type cobalamin ... 129 2e-28
gi|82543921|ref|YP_407868.1| vitamin B12 transport permease... 129 2e-28
gi|77975259|ref|ZP_00830795.1| COG4139: ABC-type cobalamin ... 129 3e-28
gi|145622243|ref|ZP_01778204.1| transport system permease p... 129 3e-28
gi|73670202|ref|YP_306217.1| Fe(III) dicitrate ABC transpor... 129 3e-28
gi|89893880|ref|YP_517367.1| hypothetical protein DSY1134 [... 129 3e-28
gi|120556436|ref|YP_960787.1| transport system permease pro... 129 3e-28
gi|150403390|ref|YP_001330684.1| transport system permease ... 129 3e-28
gi|83648116|ref|YP_436551.1| ABC-type Fe3+-siderophore tran... 129 4e-28
gi|33603630|ref|NP_891190.1| putative hemin permease [Borde... 128 4e-28
gi|83586014|ref|ZP_00924652.1| COG4139: ABC-type cobalamin ... 128 4e-28
gi|150400551|ref|YP_001324317.1| transport system permease ... 128 4e-28
gi|26250139|ref|NP_756179.1| Putative permease of iron comp... 128 5e-28
gi|75190748|ref|ZP_00704015.1| COG4139: ABC-type cobalamin ... 128 5e-28
gi|145443|gb|AAA23526.1| cytoplasmic membrane protein 128 5e-28
gi|88602599|ref|YP_502777.1| transport system permease prot... 128 6e-28
gi|75241410|ref|ZP_00725261.1| COG4139: ABC-type cobalamin ... 128 6e-28
gi|33598676|ref|NP_886319.1| putative hemin permease [Borde... 128 6e-28
gi|75242699|ref|ZP_00726443.1| COG0609: ABC-type Fe3+-sider... 128 7e-28
gi|152971612|ref|YP_001336721.1| vtamin B12-transporter per... 127 8e-28
gi|18310024|ref|NP_561958.1| probable ferric ion ABC transp... 127 8e-28
gi|20092173|ref|NP_618248.1| iron(III) ABC transporter, per... 127 9e-28
gi|33591573|ref|NP_879217.1| putative hemin permease [Borde... 127 9e-28
gi|20092264|ref|NP_618339.1| iron ABC transporter, permease... 127 1e-27
gi|15902979|ref|NP_358529.1| ABC transporter membrane-spann... 127 1e-27
gi|82778665|ref|YP_405014.1| putative permease of iron comp... 127 1e-27
gi|153897882|ref|ZP_02018449.1| transport system permease p... 127 1e-27
gi|15900904|ref|NP_345508.1| iron-compound ABC transporter,... 127 1e-27
gi|153811050|ref|ZP_01963718.1| hypothetical protein RUMOBE... 127 1e-27
gi|18478641|gb|AAL73226.1|AF338658_1 membrane permease PiaA... 127 1e-27
gi|15804050|ref|NP_290086.1| putative permease of iron comp... 127 1e-27
gi|71279080|ref|YP_267908.1| putative vitamin B12 transport... 127 1e-27
gi|15613645|ref|NP_241948.1| ferrichrome ABC transporter (p... 127 2e-27
gi|116516465|ref|YP_816394.1| iron-compound ABC transporter... 126 2e-27
gi|147918916|ref|YP_687358.1| putative ABC-type transport s... 126 2e-27
gi|49474051|ref|YP_032093.1| Hemin ABC transporter, permeas... 126 2e-27
gi|148984988|ref|ZP_01818231.1| iron-compound ABC transport... 126 2e-27
gi|148269870|ref|YP_001244330.1| transport system permease ... 126 2e-27
gi|20090098|ref|NP_616173.1| iron(III) ABC transporter, per... 126 2e-27
gi|15833640|ref|NP_312413.1| putative hemin permease [Esche... 126 2e-27
gi|85858075|ref|YP_460277.1| ABC-type Fe3+-siderophore tran... 126 2e-27
gi|146310239|ref|YP_001175313.1| transport system permease ... 126 2e-27
gi|77962220|ref|ZP_00826043.1| COG4139: ABC-type cobalamin ... 126 2e-27
gi|154496812|ref|ZP_02035508.1| hypothetical protein BACCAP... 126 3e-27
gi|15891255|ref|NP_356927.1| hypothetical protein AGR_L_229... 126 3e-27
gi|118065822|ref|ZP_01534082.1| transport system permease p... 125 3e-27
gi|15642963|ref|NP_228005.1| iron(III) ABC transporter, per... 125 3e-27
gi|88860912|ref|ZP_01135548.1| Hemin ABC-transport system p... 125 3e-27
gi|149179882|ref|ZP_01858387.1| ferric ion ABC transpoter (... 125 3e-27
gi|154504376|ref|ZP_02041114.1| hypothetical protein RUMGNA... 125 3e-27
gi|15891544|ref|NP_357216.1| hypothetical protein AGR_L_286... 125 3e-27
gi|28872668|ref|NP_795287.1| haemin ABC transporter, permea... 125 3e-27
gi|37526553|ref|NP_929897.1| vtamin B12-transporter permeas... 125 3e-27
gi|89893111|ref|YP_516598.1| hypothetical protein DSY0365 [... 125 4e-27
gi|15669899|ref|NP_247872.1| iron III dicitrate ABC transpo... 125 4e-27
gi|15669067|ref|NP_247871.1| iron(III) dicitrate transport ... 125 4e-27
gi|20090065|ref|NP_616140.1| iron ABC transporter, permease... 125 4e-27
gi|149006281|ref|ZP_01829993.1| iron-compound ABC transport... 125 4e-27
gi|157084089|gb|ABV13767.1| hypothetical protein CKO_02659 ... 125 5e-27
gi|118068745|ref|ZP_01536995.1| transport system permease p... 125 5e-27
gi|116754490|ref|YP_843608.1| transport system permease pro... 125 5e-27
gi|89892834|ref|YP_516321.1| hypothetical protein DSY0088 [... 125 5e-27
gi|109647856|ref|ZP_01371759.1| transport system permease p... 125 6e-27
gi|149191983|ref|ZP_01870212.1| putative hemin ABC transpor... 124 6e-27
gi|116753756|ref|YP_842874.1| transport system permease pro... 124 6e-27
gi|153094282|gb|EDN75146.1| possible hemin ABC superfamily ... 124 6e-27
gi|19704219|ref|NP_603780.1| Hemin transport system permeas... 124 6e-27
gi|118733160|ref|ZP_01581672.1| transport system permease p... 124 6e-27
gi|21465989|pdb|1L7V|A Chain A, Bacterial Abc Transporter I... 124 7e-27
gi|20090697|ref|NP_616772.1| iron(III) ABC transporter, per... 124 8e-27
gi|29376195|ref|NP_815349.1| iron compound ABC transporter,... 124 8e-27
gi|134045452|ref|YP_001096938.1| transport system permease ... 124 9e-27
gi|55978402|ref|YP_145458.1| hemin ABC transporter, permeas... 124 9e-27
gi|50120762|ref|YP_049929.1| vtamin B12-transporter permeas... 124 9e-27
gi|156448990|ref|ZP_02055374.1| transport system permease p... 124 9e-27
gi|121602651|ref|YP_988773.1| hemin ABC transporter, permea... 124 1e-26
gi|106893290|ref|ZP_01360416.1| transport system permease p... 124 1e-26
gi|34763547|ref|ZP_00144484.1| Hemin transport system perme... 124 1e-26
gi|89099447|ref|ZP_01172323.1| ferric ion ABC transpoter (p... 124 1e-26
gi|77920648|ref|YP_358463.1| ABC-type Fe3+-siderophore tran... 124 1e-26
gi|78356666|ref|YP_388115.1| iron(III) dicitrate transport ... 124 1e-26
gi|28210670|ref|NP_781614.1| iron(III) dicitrate transport ... 123 1e-26
gi|56459225|ref|YP_154506.1| ABC-type hemin transport syste... 123 1e-26
gi|28900277|ref|NP_799932.1| putative hemin ABC transporter... 123 1e-26
gi|77461020|ref|YP_350527.1| transport system permease prot... 123 1e-26
gi|148322408|gb|EDK87658.1| heme ABC superfamily ATP bindin... 123 1e-26
gi|28210501|ref|NP_781445.1| iron(III) dicitrate transport ... 123 2e-26
gi|94314296|ref|YP_587505.1| transport system permease prot... 123 2e-26
gi|28210885|ref|NP_781829.1| putative ferrichrome ABC trans... 123 2e-26
gi|149908303|ref|ZP_01896967.1| putative iron ABC transport... 123 2e-26
gi|150402355|ref|YP_001329649.1| transport system permease ... 123 2e-26
gi|124486110|ref|YP_001030726.1| hypothetical protein Mlab_... 123 2e-26
gi|126180270|ref|YP_001048235.1| transport system permease ... 123 2e-26
gi|109672707|ref|ZP_01374942.1| iron chelatin ABC transport... 123 2e-26
gi|88601533|ref|YP_501711.1| transport system permease prot... 123 2e-26
gi|86742916|ref|YP_483316.1| transport system permease prot... 123 2e-26
gi|123441783|ref|YP_001005767.1| putative FecCD-family memb... 123 2e-26
gi|71737364|ref|YP_277263.1| haemin ABC transporter, permea... 122 2e-26
gi|15895260|ref|NP_348609.1| ABC-type iron (III) transport ... 122 2e-26
gi|22125807|ref|NP_669230.1| vtamin B12-transporter permeas... 122 2e-26
gi|21219514|ref|NP_625293.1| Fe uptake system integral memb... 122 3e-26
gi|91773039|ref|YP_565731.1| ABC Fe3+-siderophore transport... 122 3e-26
gi|89205311|ref|ZP_01183882.1| transport system permease pr... 122 3e-26
gi|57641954|ref|YP_184432.1| ABC-type iron(III)-siderophore... 122 3e-26
gi|88799510|ref|ZP_01115087.1| hemin ABC transporter, perme... 122 4e-26
gi|110680643|ref|YP_683650.1| putative hemin ABC transport ... 122 4e-26
gi|94984233|ref|YP_603597.1| transport system permease prot... 122 4e-26
gi|75188998|ref|ZP_00702265.1| COG0609: ABC-type Fe3+-sider... 122 4e-26
gi|16132109|ref|NP_418708.1| KpLE2 phage-like element; iron... 122 4e-26
gi|145298627|ref|YP_001141468.1| vitamin B12 import system ... 122 4e-26
gi|82779334|ref|YP_405683.1| citrate-dependent iron transpo... 122 4e-26
gi|110735145|gb|ABG89143.1| hemin ABC transport system perm... 122 4e-26
gi|83586668|ref|ZP_00925300.1| COG0609: ABC-type Fe3+-sider... 122 5e-26
gi|3044095|gb|AAC13286.1| ABC-type permease [Pseudomonas ae... 122 5e-26
gi|126738905|ref|ZP_01754601.1| transport system permease p... 122 5e-26
gi|16273375|ref|NP_439622.1| iron chelatin ABC transporter ... 122 5e-26
gi|116252461|ref|YP_768299.1| putative iron ABC transporter... 122 5e-26
gi|147919232|ref|YP_687032.1| ABC-type transport system, pe... 121 6e-26
gi|119476239|ref|ZP_01616590.1| hemin ABC transporter, perm... 121 6e-26
gi|152969090|ref|YP_001334199.1| putative ABC transporter p... 121 6e-26
gi|77635563|ref|ZP_00797646.1| COG4139: ABC-type cobalamin ... 121 6e-26
gi|116754347|ref|YP_843465.1| transport system permease pro... 121 6e-26
gi|16122645|ref|NP_405958.1| vtamin B12-transporter permeas... 121 6e-26
gi|86135917|ref|ZP_01054496.1| hypothetical protein MED193_... 121 6e-26
gi|16121593|ref|NP_404906.1| putative FecCD-family membrane... 121 6e-26
gi|53732804|ref|ZP_00349576.1| COG0609: ABC-type Fe3+-sider... 121 6e-26
gi|90416891|ref|ZP_01224820.1| putative hemin ABC transport... 121 6e-26
gi|90408432|ref|ZP_01216593.1| putative FecCD-family ABC tr... 121 6e-26
gi|85712330|ref|ZP_01043380.1| ABC-type hemin transport sys... 121 7e-26
gi|45358745|ref|NP_988302.1| Iron(III) dicitrate transport ... 121 7e-26
gi|74314753|ref|YP_313172.1| citrate-dependent iron transpo... 121 7e-26
gi|15615853|ref|NP_244157.1| ferrichrome ABC transporter (p... 121 7e-26
gi|69934757|ref|ZP_00629788.1| transport system permease pr... 121 8e-26
gi|152994884|ref|YP_001339719.1| transport system permease ... 121 8e-26
gi|77634355|ref|ZP_00796457.1| COG0609: ABC-type Fe3+-sider... 120 9e-26
gi|119470509|ref|ZP_01613212.1| putative Iron-compound ABC ... 120 9e-26
gi|11498997|ref|NP_070231.1| iron (III) ABC transporter, pe... 120 9e-26
gi|65321894|ref|ZP_00394853.1| COG0609: ABC-type Fe3+-sider... 120 1e-25
gi|110679897|ref|YP_682904.1| FecCD-family membrane transpo... 120 1e-25
gi|30264596|ref|NP_846973.1| iron compound ABC transporter,... 120 1e-25
gi|117620632|ref|YP_857244.1| vitamin B12 import system per... 120 1e-25
gi|118479681|ref|YP_896832.1| iron compound ABC transporter... 120 1e-25
gi|51246831|ref|YP_066715.1| iron (III) ABC transporter, pe... 120 1e-25
gi|51893072|ref|YP_075763.1| iron ABC transporter permease ... 120 1e-25
gi|90419179|ref|ZP_01227089.1| putative ABC-type Fe3+-sider... 120 1e-25
gi|109672435|ref|ZP_01374673.1| iron ABC transporter, perme... 120 1e-25
gi|153810310|ref|ZP_01962978.1| hypothetical protein RUMOBE... 120 1e-25
gi|1621210|emb|CAA66711.1| fbiD [Bacillus intermedius] 120 1e-25
gi|148643454|ref|YP_001273967.1| iron(III) ABC transporter,... 120 1e-25
gi|146296083|ref|YP_001179854.1| transport system permease ... 120 1e-25
gi|119356283|ref|YP_910927.1| transport system permease pro... 120 2e-25
gi|18977282|ref|NP_578639.1| iron (III) ABC transporter, pe... 120 2e-25
gi|84683926|ref|ZP_01011828.1| putative hemin transport sys... 120 2e-25
gi|106887791|ref|ZP_01355071.1| transport system permease p... 120 2e-25
gi|42526689|ref|NP_971787.1| iron compound ABC transporter,... 120 2e-25
gi|114843387|ref|ZP_01453852.1| transport system permease p... 120 2e-25
gi|89095140|ref|ZP_01168065.1| hemin ABC transporter, perme... 120 2e-25
gi|19705265|ref|NP_602760.1| Hemin transport system permeas... 120 2e-25
gi|91775959|ref|YP_545715.1| transport system permease prot... 120 2e-25
gi|15668258|ref|NP_247051.1| hemin permease (hemU) [Methano... 119 2e-25
gi|86358869|ref|YP_470761.1| hemin transport system, permea... 119 2e-25
gi|50842268|ref|YP_055495.1| ABC-type transporter, permease... 119 2e-25
gi|111075277|gb|ABH04959.1| hemin ABC transporter system pe... 119 2e-25
gi|119860470|ref|ZP_01641864.1| transport system permease p... 119 2e-25
gi|118443942|ref|YP_877528.1| iron compound ABC transporter... 119 2e-25
gi|16265006|ref|NP_437798.1| putative iron ABC transporter ... 119 2e-25
gi|150019313|ref|YP_001311567.1| transport system permease ... 119 3e-25
gi|91228740|ref|ZP_01262651.1| putative hemin ABC transport... 119 3e-25
gi|56963602|ref|YP_175333.1| ferric ion ABC transporter per... 119 3e-25
gi|52141138|ref|YP_085691.1| iron compound ABC transporter,... 119 3e-25
gi|68535382|ref|YP_250087.1| putative iron ABC transport sy... 119 3e-25
gi|20806885|ref|NP_622056.1| ABC-type cobalamin/Fe3+-sidero... 119 3e-25
gi|50122164|ref|YP_051331.1| ABC transporter permease (FecC... 119 4e-25
gi|77361480|ref|YP_341055.1| Iron-compound ABC transporter ... 119 4e-25
gi|76795367|ref|ZP_00777740.1| transport system permease pr... 119 4e-25
gi|150018522|ref|YP_001310776.1| transport system permease ... 119 4e-25
gi|49475289|ref|YP_033330.1| Hemin ABC transporter, permeas... 119 4e-25
gi|126651444|ref|ZP_01723648.1| iron(III) dicitrate transpo... 118 5e-25
gi|153829430|ref|ZP_01982097.1| iron chelate uptake ABC tra... 118 5e-25
gi|147675213|ref|YP_001216810.1| putative vitamin B12 ABC t... 118 5e-25
gi|124485973|ref|YP_001030589.1| hypothetical protein Mlab_... 118 5e-25
gi|26246201|ref|NP_752240.1| hypothetical protein c0296 [Es... 118 5e-25
gi|42783495|ref|NP_980742.1| iron compound ABC transporter,... 118 5e-25
gi|90425094|ref|YP_533464.1| transport system permease prot... 118 5e-25
gi|153941046|ref|YP_001390703.1| iron chelate uptake ABC tr... 118 5e-25
gi|85059517|ref|YP_455219.1| hemin ABC transporter permease... 118 6e-25
gi|92115205|ref|YP_575133.1| transport system permease prot... 118 7e-25
gi|153212287|ref|ZP_01948075.1| vitamin B12 ABC transporter... 118 7e-25
gi|126180041|ref|YP_001048006.1| transport system permease ... 118 7e-25
gi|90423474|ref|YP_531844.1| transport system permease prot... 117 7e-25
gi|15641257|ref|NP_230889.1| vtamin B12-transporter permeas... 117 7e-25
gi|153894929|ref|ZP_02015512.1| transport system permease p... 117 8e-25
gi|150398885|ref|YP_001322652.1| transport system permease ... 117 8e-25
gi|86747294|ref|YP_483790.1| transport system permease prot... 117 8e-25
gi|89206330|ref|ZP_01184890.1| transport system permease pr... 117 8e-25
gi|126731686|ref|ZP_01747491.1| ABC transporter, membrane s... 117 8e-25
gi|46255249|ref|YP_006161.1| hemin transport system permeas... 117 9e-25
gi|116219910|ref|ZP_01485367.1| hypothetical protein VchoV5... 117 9e-25
gi|116216523|ref|ZP_01482373.1| hypothetical protein VchoR_... 117 9e-25
gi|150376560|ref|YP_001313156.1| transport system permease ... 117 9e-25
gi|114843981|ref|ZP_01454439.1| transport system permease p... 117 9e-25
gi|52081809|ref|YP_080600.1| putative iron transport system... 117 1e-24
gi|148379317|ref|YP_001253858.1| iron ABC transporter, perm... 117 1e-24
gi|77456819|ref|YP_346324.1| transport system permease prot... 117 1e-24
gi|113938287|ref|ZP_01424156.1| transport system permease p... 117 1e-24
gi|83954138|ref|ZP_00962858.1| iron compound ABC transporte... 117 1e-24
gi|109897465|ref|YP_660720.1| transport system permease pro... 117 1e-24
gi|49478681|ref|YP_038580.1| iron compound ABC transporter,... 117 1e-24
gi|83815203|ref|YP_446821.1| hemin ABC transporter, permeas... 117 1e-24
gi|95930904|ref|ZP_01313634.1| transport system permease pr... 117 1e-24
gi|154150529|ref|YP_001404147.1| transport system permease ... 117 1e-24
gi|83942963|ref|ZP_00955423.1| iron compound ABC transporte... 117 1e-24
gi|153801925|ref|ZP_01956511.1| vitamin B12 ABC transporter... 117 1e-24
gi|152994440|ref|YP_001339275.1| transport system permease ... 117 1e-24
gi|70732574|ref|YP_262337.1| heme/hemin ABC transporter, pe... 117 1e-24
gi|17230732|ref|NP_487280.1| permease protein of ferrichrom... 117 1e-24
gi|106894804|ref|ZP_01361918.1| transport system permease p... 117 1e-24
gi|59797892|sp|Q9KSL2|BTUC_VIBCH Vitamin B12 import system ... 117 1e-24
gi|150379712|ref|ZP_01918809.1| transport system permease p... 117 1e-24
gi|107103806|ref|ZP_01367724.1| hypothetical protein PaerPA... 117 2e-24
gi|90578040|ref|ZP_01233851.1| putative FecCD-family ABC tr... 117 2e-24
gi|116185786|ref|ZP_01475690.1| hypothetical protein VEx2w_... 117 2e-24
gi|53688900|ref|ZP_00112106.2| COG0609: ABC-type Fe3+-sider... 116 2e-24
gi|15603173|ref|NP_246246.1| HemU [Pasteurella multocida su... 116 2e-24
gi|149203161|ref|ZP_01880132.1| transport system permease p... 116 2e-24
gi|116753760|ref|YP_842878.1| transport system permease pro... 116 2e-24
gi|149908240|ref|ZP_01896904.1| haemin ABC transporter, per... 116 2e-24
gi|124486194|ref|YP_001030810.1| hypothetical protein Mlab_... 116 2e-24
gi|57640642|ref|YP_183120.1| ABC-type iron(III)-siderophore... 116 2e-24
gi|126733655|ref|ZP_01749402.1| putative hemin ABC transpor... 116 2e-24
gi|95929786|ref|ZP_01312527.1| transport system permease pr... 116 2e-24
gi|30022443|ref|NP_834074.1| Ferrichrome transport system p... 116 2e-24
gi|75911093|ref|YP_325389.1| transport system permease prot... 116 2e-24
gi|152970699|ref|YP_001335808.1| iron ABC transporter, perm... 116 2e-24
gi|47566554|ref|ZP_00237376.1| ferrichrome transport permea... 116 2e-24
gi|127511647|ref|YP_001092844.1| transport system permease ... 116 2e-24
gi|88770234|gb|ABD51671.1| EitB [Escherichia coli APEC O1] 116 2e-24
gi|83954921|ref|ZP_00963599.1| permease protein of ABC tran... 116 2e-24
gi|153832978|ref|ZP_01985645.1| iron(III) dicitrate transpo... 116 2e-24
gi|16329183|ref|NP_439911.1| iron(III) dicitrate transport ... 116 3e-24
gi|16080370|ref|NP_391197.1| hypothetical protein BSU33170 ... 116 3e-24
gi|149907532|ref|ZP_01896279.1| putative hemin ABC transpor... 116 3e-24
gi|15603013|ref|NP_246085.1| hypothetical protein PM1148 [P... 115 3e-24
gi|84060930|ref|YP_444142.1| EitB [Escherichia coli] >gi|60... 115 3e-24
gi|126178553|ref|YP_001046518.1| transport system permease ... 115 3e-24
gi|154687443|ref|YP_001422604.1| FhuG [Bacillus amyloliquef... 115 3e-24
gi|73669883|ref|YP_305898.1| hypothetical protein Mbar_A239... 115 3e-24
gi|76257950|ref|ZP_00765607.1| transport system permease pr... 115 3e-24
gi|90407107|ref|ZP_01215296.1| iron(III) dicitrate transpor... 115 3e-24
gi|60650916|gb|AAX31541.1| putative ABC transporter permeas... 115 3e-24
gi|156976467|ref|YP_001447373.1| hypothetical protein VIBHA... 115 3e-24
gi|61657461|emb|CAI44374.1| putative, iron(III) ABC transpo... 115 3e-24
gi|150376224|ref|YP_001312820.1| transport system permease ... 115 4e-24
gi|26991372|ref|NP_746797.1| heme/hemin ABC transporter, pe... 115 4e-24
gi|77918078|ref|YP_355893.1| hemin permease [Pelobacter car... 115 4e-24
gi|61657435|emb|CAI44350.1| putative iron(III) ABC transpor... 115 4e-24
gi|85860933|ref|YP_463135.1| ABC-type Fe3+-siderophore tran... 115 4e-24
gi|118479531|ref|YP_896682.1| iron compound ABC transporter... 115 4e-24
gi|95928835|ref|ZP_01311581.1| transport system permease pr... 115 4e-24
gi|75812434|ref|YP_320053.1| transport system permease prot... 115 4e-24
gi|118047922|ref|ZP_01516546.1| transport system permease p... 115 4e-24
gi|106893272|ref|ZP_01360398.1| iron compounds ABC transpor... 115 4e-24
gi|154498783|ref|ZP_02037161.1| hypothetical protein BACCAP... 115 4e-24
gi|83943539|ref|ZP_00955998.1| permease protein of ABC tran... 115 5e-24
gi|153951720|ref|YP_001398896.1| putative hemin ABC transpo... 115 5e-24
gi|114562053|ref|YP_749566.1| transport system permease pro... 115 5e-24
gi|126359926|ref|ZP_01716917.1| transport system permease p... 115 5e-24
gi|109897811|ref|YP_661066.1| transport system permease pro... 115 5e-24
gi|13471234|ref|NP_102803.1| permease protein of ABC transp... 115 5e-24
gi|154687431|ref|YP_001422592.1| YvrB [Bacillus amyloliquef... 115 5e-24
gi|14591055|ref|NP_143130.1| ferrichrome transport permease... 115 6e-24
gi|59711828|ref|YP_204604.1| hemin transport system permeas... 114 6e-24
gi|118727352|ref|ZP_01575955.1| transport system permease p... 114 6e-24
gi|153954331|ref|YP_001395096.1| Predicted ABC transporter,... 114 6e-24
gi|15801424|ref|NP_287441.1| putative iron compound ABC tra... 114 6e-24
gi|125718385|ref|YP_001035518.1| ABC-type Fe3+-siderophore ... 114 7e-24
gi|90411263|ref|ZP_01219275.1| ABC transporter permease (Fe... 114 7e-24
gi|30264438|ref|NP_846815.1| iron compound ABC transporter,... 114 7e-24
gi|115351747|ref|YP_773586.1| transport system permease pro... 114 7e-24
gi|148973953|ref|ZP_01811486.1| putative hemin ABC transpor... 114 7e-24
gi|73748485|ref|YP_307724.1| ABC-type cobalamin/Fe3+-sidero... 114 8e-24
gi|15599901|ref|NP_253395.1| probable permease of ABC trans... 114 8e-24
gi|89894831|ref|YP_518318.1| permease component of ABC-type... 114 8e-24
gi|82776534|ref|YP_402883.1| putative iron compound ABC tra... 114 8e-24
gi|18309775|ref|NP_561709.1| probable iron(III) dicitrate A... 114 9e-24
gi|110633796|ref|YP_674004.1| transport system permease pro... 114 9e-24
gi|149376858|ref|ZP_01894614.1| hemin ABC transporter, perm... 114 9e-24
gi|126658820|ref|ZP_01729964.1| iron(III) dicitrate transpo... 114 9e-24
gi|49187260|ref|YP_030512.1| iron compound ABC transporter,... 114 9e-24
gi|90022845|ref|YP_528672.1| putative transmembrane ABC tra... 114 9e-24
gi|57238628|ref|YP_179759.1| hemin ABC transporter, permeas... 114 1e-23
gi|34494603|emb|CAE46554.1| putative ABC-transporter permea... 114 1e-23
gi|37526742|ref|NP_930086.1| hypothetical protein plu2852 [... 114 1e-23
gi|115373260|ref|ZP_01460560.1| hemin ABC transporter perme... 114 1e-23
gi|38233678|ref|NP_939445.1| Putative iron transport membra... 114 1e-23
gi|118756216|ref|ZP_01603997.1| transport system permease p... 114 1e-23
gi|119509648|ref|ZP_01628794.1| iron(III) dicitrate transpo... 114 1e-23
gi|68550337|ref|ZP_00589788.1| transport system permease pr... 114 1e-23
gi|118580496|ref|YP_901746.1| transport system permease pro... 114 1e-23
gi|152994294|ref|YP_001339129.1| transport system permease ... 114 1e-23
gi|149188703|ref|ZP_01866994.1| vtamin B12-transporter perm... 114 1e-23
gi|114797228|ref|YP_760229.1| iron compound ABC transporter... 114 1e-23
gi|145637019|ref|ZP_01792683.1| hypothetical protein CGSHiH... 114 1e-23
gi|52137555|emb|CAH33822.1| HutC protein [Photobacterium da... 114 1e-23
gi|118737234|ref|ZP_01585638.1| transport system permease p... 114 1e-23
gi|146283589|ref|YP_001173742.1| probable permease of ABC t... 113 1e-23
gi|15889730|ref|NP_355411.1| hypothetical protein AGR_C_446... 113 1e-23
gi|57234536|ref|YP_181427.1| ABC-type cobalamin/Fe3+-sidero... 113 1e-23
gi|86153093|ref|ZP_01071298.1| hemin transport system perme... 113 1e-23
gi|149194425|ref|ZP_01871522.1| hemin permease (hemU) [Cami... 113 1e-23
gi|90578831|ref|ZP_01234641.1| putative hemin ABC transport... 113 2e-23
gi|56962855|ref|YP_174582.1| ferrichrome ABC transporter pe... 113 2e-23
gi|148974001|ref|ZP_01811534.1| putative iron(III) ABC tran... 113 2e-23
gi|86152301|ref|ZP_01070512.1| hemin ABC transporter, perme... 113 2e-23
gi|108743484|dbj|BAE95587.1| putative FecCD-family membrane... 113 2e-23
gi|46129167|ref|ZP_00202022.1| COG0609: ABC-type Fe3+-sider... 113 2e-23
gi|154174507|ref|YP_001407488.1| HmuU protein [Campylobacte... 113 2e-23
gi|42491190|emb|CAF25488.1| HuvC protein [Listonella anguil... 113 2e-23
gi|118471829|ref|YP_890285.1| Fe uptake system integral mem... 113 2e-23
gi|42527735|ref|NP_972833.1| iron compound ABC transporter,... 113 2e-23
gi|28170651|emb|CAD61865.1| putative EhuU protein [Enteroba... 113 2e-23
gi|148380851|ref|YP_001255392.1| iron compounds ABC transpo... 113 2e-23
gi|152977565|ref|YP_001377082.1| transport system permease ... 113 2e-23
gi|146306029|ref|YP_001186494.1| transport system permease ... 113 2e-23
gi|78484524|ref|YP_390449.1| transport system permease prot... 113 2e-23
gi|89076338|ref|ZP_01162675.1| putative FecCD-family ABC tr... 113 2e-23
gi|153938522|ref|YP_001392176.1| iron chelate uptake ABC tr... 113 2e-23
gi|86144494|ref|ZP_01062826.1| putative hemin ABC transport... 113 2e-23
gi|152988139|ref|YP_001347612.1| probable permease of ABC t... 112 2e-23
gi|84385339|ref|ZP_00988371.1| putative iron(III) ABC trans... 112 3e-23
gi|116050916|ref|YP_790260.1| putative permease of ABC tran... 112 3e-23
gi|86749814|ref|YP_486310.1| transport system permease prot... 112 3e-23
>gi|150007663|ref|YP_001302406.1| iron(III) ABC transporter putative permease protein
[Parabacteroides distasonis ATCC 8503]
gi|149936087|gb|ABR42784.1| iron(III) ABC transporter putative permease protein
[Parabacteroides distasonis ATCC 8503]
Length = 354
Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats.
Identities = 262/345 (75%), Positives = 308/345 (89%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVP 60
M+ L ++ I +I FLNLVLGSV IPL+SVW+I+ EP+ WQNI+WKSR+P
Sbjct: 1 MRHSNTLWMLAIVTAIFVLIFLNLVLGSVSIPLQSVWHIIWNLGNEPITWQNIIWKSRLP 60
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSK 120
Q++TALVAGAGLS+SGLQMQTVFRNPLAGPSVLGISSGAS+GVA V+LLSGS+GGVALSK
Sbjct: 61 QALTALVAGAGLSISGLQMQTVFRNPLAGPSVLGISSGASMGVAFVVLLSGSLGGVALSK 120
Query: 121 LGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSV 180
LG++GEIAL+IAA G+LSVM LIV+VSQKVKG+VTLLIIGVMIGYVANA+IGV K+FSV
Sbjct: 121 LGFMGEIALSIAAVIGSLSVMALIVYVSQKVKGNVTLLIIGVMIGYVANAVIGVLKFFSV 180
Query: 181 EEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLN 240
EEDIRAYVIWGLGSFARVSGNQMTLF+ +M IL+PLSFLLIKT+NL+LLGD YA+NLGLN
Sbjct: 181 EEDIRAYVIWGLGSFARVSGNQMTLFVILMTILIPLSFLLIKTMNLMLLGDSYARNLGLN 240
Query: 241 IKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSL 300
IKRARL VI+ +G+LTAIVTAYCGP+IFLGLAVPHLCR + +TSDHR+LMPA + G++L
Sbjct: 241 IKRARLLVITSAGVLTAIVTAYCGPIIFLGLAVPHLCRAIFQTSDHRILMPAVLFAGAAL 300
Query: 301 ALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKNEMSE 345
AL+CNLIARMPGFEGALPVNS+TAL+GAP+V VLF KRKNE++E
Sbjct: 301 ALICNLIARMPGFEGALPVNSVTALVGAPVVASVLFRKRKNELNE 345
>gi|154492943|ref|ZP_02032569.1| hypothetical protein PARMER_02585 [Parabacteroides merdae ATCC
43184]
gi|154087248|gb|EDN86293.1| hypothetical protein PARMER_02585 [Parabacteroides merdae ATCC
43184]
Length = 337
Score = 463 bits (1191), Expect = e-129, Method: Composition-based stats.
Identities = 269/335 (80%), Positives = 307/335 (91%)
Query: 11 FISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGA 70
I SI+ FLNLVLGSV IPL+SVWNI+CG +EPV WQNIVWKSR+PQ++TALVAGA
Sbjct: 3 LIVASILVLMFLNLVLGSVSIPLKSVWNIICGLGDEPVTWQNIVWKSRLPQALTALVAGA 62
Query: 71 GLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALT 130
GL++SGLQMQTVFRNPLAGPSVLGISSGAS+GVA V+LLSGS+GGVALSKLG++GEIAL+
Sbjct: 63 GLAISGLQMQTVFRNPLAGPSVLGISSGASMGVAFVVLLSGSLGGVALSKLGFMGEIALS 122
Query: 131 IAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIW 190
IAA G+LSVM LIV+VSQKVKG+VTLLIIGVMIGYVANA+IGV K+FSVEEDIRAYVIW
Sbjct: 123 IAAVIGSLSVMALIVYVSQKVKGNVTLLIIGVMIGYVANAVIGVLKFFSVEEDIRAYVIW 182
Query: 191 GLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVIS 250
GLGSF+RVSGNQM LF+ IM IL+PLSFLLIKTLNL+LLGDGYA+NLGLNIKRARL VI+
Sbjct: 183 GLGSFSRVSGNQMMLFVAIMAILIPLSFLLIKTLNLMLLGDGYARNLGLNIKRARLLVIT 242
Query: 251 CSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARM 310
+G+LTAIVTAYCGPVIFLGLAVPHLCR + +TSDHRVLMPA + G++LAL+CNLIARM
Sbjct: 243 SAGVLTAIVTAYCGPVIFLGLAVPHLCRAIFQTSDHRVLMPAVLFAGAALALVCNLIARM 302
Query: 311 PGFEGALPVNSITALIGAPIVVYVLFSKRKNEMSE 345
PGFEGALPVNS+TALIGAP+V VLF KRKNE++E
Sbjct: 303 PGFEGALPVNSVTALIGAPVVASVLFRKRKNELNE 337
>gi|53713482|ref|YP_099474.1| iron(III) ABC transporter putative permease protein [Bacteroides
fragilis YCH46]
gi|60681726|ref|YP_211870.1| putative iron transport related membrane protein [Bacteroides
fragilis NCTC 9343]
gi|52216347|dbj|BAD48940.1| iron(III) ABC transporter putative permease protein [Bacteroides
fragilis YCH46]
gi|60493160|emb|CAH07941.1| putative iron transport related membrane protein [Bacteroides
fragilis NCTC 9343]
Length = 345
Score = 460 bits (1183), Expect = e-128, Method: Composition-based stats.
Identities = 268/345 (77%), Positives = 315/345 (91%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVP 60
MKR T+ +++ I+ SI FF LNL+LGSV IP+ SVWNI+ G +E V+WQNI+WKSRVP
Sbjct: 1 MKRPTIPLMLLIAASIFVFFLLNLLLGSVSIPIGSVWNILWGGTDESVIWQNIIWKSRVP 60
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSK 120
Q++TALVAGAGLS+SGLQMQTVFRNPLAGPSVLGISSGASLGVA V+LLSG+ GGVALSK
Sbjct: 61 QALTALVAGAGLSISGLQMQTVFRNPLAGPSVLGISSGASLGVAFVVLLSGAFGGVALSK 120
Query: 121 LGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSV 180
LGY+GE+AL++AA GALSVM LIV+VSQKVKG+VTLLIIGVMIGYVA+A+IGV KYFSV
Sbjct: 121 LGYMGEVALSLAAVIGALSVMALIVYVSQKVKGNVTLLIIGVMIGYVASAVIGVLKYFSV 180
Query: 181 EEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLN 240
EEDIRAYVIWGLGSFARVSG+QMTLF+ IM++L+PLSFLLIKT+NL+LLGDGYA+NLGLN
Sbjct: 181 EEDIRAYVIWGLGSFARVSGDQMTLFVCIMVVLIPLSFLLIKTMNLMLLGDGYARNLGLN 240
Query: 241 IKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSL 300
IKRARL VISCSG+L AIVTAYCGP++F+GLAVPHLCR + TSDHR+LMPA +L G+SL
Sbjct: 241 IKRARLLVISCSGVLVAIVTAYCGPIMFIGLAVPHLCRAIFHTSDHRILMPATLLAGASL 300
Query: 301 ALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKNEMSE 345
AL+CNL+ARMPGFEGALPVNS+TAL+GAP+V VLF KRK+E+SE
Sbjct: 301 ALVCNLVARMPGFEGALPVNSVTALVGAPVVASVLFRKRKSELSE 345
>gi|156860226|gb|EDO53657.1| hypothetical protein BACUNI_02936 [Bacteroides uniformis ATCC 8492]
Length = 346
Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats.
Identities = 267/345 (77%), Positives = 312/345 (90%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVP 60
+KR + +++ SI FF LNL+ GSVHIPLRSVWNI+ G+ +E V+WQNI+WKSRVP
Sbjct: 2 IKRPILPLMLLTLASIFLFFLLNLLFGSVHIPLRSVWNILWGNTDESVIWQNIIWKSRVP 61
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSK 120
Q++TALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVA V+LLSG++GGVALS+
Sbjct: 62 QALTALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVACVVLLSGAMGGVALSR 121
Query: 121 LGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSV 180
LGY+GE+AL++AA GAL+VM LIV+VSQKVKG+VTLLIIGVMIGYVA+A+IGV KYFSV
Sbjct: 122 LGYMGEVALSVAAIIGALAVMALIVYVSQKVKGNVTLLIIGVMIGYVASAVIGVLKYFSV 181
Query: 181 EEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLN 240
EEDIRAYVIWGLGSFARVSG+QM LF+ IM +LLPLSFLLIKT+NLLLLGDGYA+NLGLN
Sbjct: 182 EEDIRAYVIWGLGSFARVSGDQMVLFVCIMAVLLPLSFLLIKTMNLLLLGDGYARNLGLN 241
Query: 241 IKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSL 300
IKRARL VISCSG+L AIVTAYCGP++F+GLAVPHLCR + +SDHRVLMPA +L G+SL
Sbjct: 242 IKRARLLVISCSGVLVAIVTAYCGPIMFIGLAVPHLCRAIFHSSDHRVLMPATLLVGASL 301
Query: 301 ALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKNEMSE 345
AL+CNLIARMPGFEGALPVNS+TAL+GAP+V VLF KRK E++E
Sbjct: 302 ALVCNLIARMPGFEGALPVNSVTALVGAPVVASVLFRKRKGELNE 346
>gi|150005590|ref|YP_001300334.1| iron(III) ABC transporter putative permease protein [Bacteroides
vulgatus ATCC 8482]
gi|149934014|gb|ABR40712.1| iron(III) ABC transporter putative permease protein [Bacteroides
vulgatus ATCC 8482]
Length = 345
Score = 443 bits (1139), Expect = e-123, Method: Composition-based stats.
Identities = 276/345 (80%), Positives = 318/345 (92%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVP 60
MKR ++ I SI FFFLNLVLGSV IPLR+VWNI+ G+ E V+WQNI+WKSRVP
Sbjct: 1 MKRPVAFYMLLIMASIFLFFFLNLVLGSVSIPLRAVWNILWGTGNESVIWQNIIWKSRVP 60
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSK 120
Q++TAL AGAGLSVSGLQMQTVFRNPLAGPSVLGISSGAS+GVA V+LLSGS+GGVALSK
Sbjct: 61 QALTALAAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASMGVAFVVLLSGSLGGVALSK 120
Query: 121 LGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSV 180
LG++GEIALTIAA AG+LS+M LIVFVSQKV+G+VTLLIIGVMIGY+ANA+IGV K+FSV
Sbjct: 121 LGFMGEIALTIAAIAGSLSIMALIVFVSQKVRGNVTLLIIGVMIGYIANAVIGVLKFFSV 180
Query: 181 EEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLN 240
EEDIRAYVIWGLGSFARVSG+QMTLFI IM++LLPLSFLL+KTLNLLLLGD YA+NLGLN
Sbjct: 181 EEDIRAYVIWGLGSFARVSGDQMTLFICIMVVLLPLSFLLVKTLNLLLLGDAYARNLGLN 240
Query: 241 IKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSL 300
IKRARL VI+CSG+L AIVTAYCGP+IFLGLAVPHLCRG+ RTSDHR+LMPA++L G+SL
Sbjct: 241 IKRARLLVITCSGVLVAIVTAYCGPIIFLGLAVPHLCRGMFRTSDHRILMPASLLAGASL 300
Query: 301 ALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKNEMSE 345
AL+CNLIARMPGFEGALPVNS+TAL+GAP+V+ VLF+KR+NEM+E
Sbjct: 301 ALVCNLIARMPGFEGALPVNSVTALVGAPVVMSVLFNKRRNEMNE 345
>gi|34540469|ref|NP_904948.1| iron compound ABC transporter, permease protein [Porphyromonas
gingivalis W83]
gi|34396782|gb|AAQ65847.1| iron compound ABC transporter, permease protein [Porphyromonas
gingivalis W83]
Length = 356
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 221/336 (65%), Positives = 273/336 (81%), Gaps = 3/336 (0%)
Query: 8 VLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCG---SAEEPVVWQNIVWKSRVPQSIT 64
+L + +++ F +NL LGSV IP+ ++ + E +V NI+WKSR+P+++T
Sbjct: 15 ILAALGGAVLILFGVNLFLGSVAIPMSEIFRHLFSDRPEGGEALVHYNILWKSRLPEALT 74
Query: 65 ALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYI 124
A AGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVA V+LLSGS+GGVALS LGY+
Sbjct: 75 AAFAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVALVVLLSGSLGGVALSSLGYM 134
Query: 125 GEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDI 184
GE+A+ IAA G+L+VM LIVFVS KV+ VTLLIIGVMIGYVA A+IGVFK+FS+EEDI
Sbjct: 135 GEVAMNIAAAVGSLAVMGLIVFVSTKVRSHVTLLIIGVMIGYVATAVIGVFKFFSIEEDI 194
Query: 185 RAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRA 244
RAYVIWGLGSF+R + +Q++ F +M+I +P LL+K LNLLLLG+ YA+NLGLN +RA
Sbjct: 195 RAYVIWGLGSFSRATDSQLSFFAILMLIFIPAGMLLVKQLNLLLLGESYARNLGLNTRRA 254
Query: 245 RLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLC 304
RL VIS +G+L A VTAYCGP+ FLG+AVPHL R + TSDHR+LMPA L GS+LAL C
Sbjct: 255 RLLVISSAGLLIATVTAYCGPIGFLGMAVPHLARVIFHTSDHRILMPATCLIGSALALFC 314
Query: 305 NLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
N+IARMPGFEGALPVNS+TAL+GAPI+V VLF +R+
Sbjct: 315 NIIARMPGFEGALPVNSVTALVGAPIIVTVLFRRRR 350
>gi|150010248|ref|YP_001304991.1| iron(III) ABC transporter putative permease protein
[Parabacteroides distasonis ATCC 8503]
gi|149938672|gb|ABR45369.1| iron(III) ABC transporter putative permease protein
[Parabacteroides distasonis ATCC 8503]
Length = 344
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 154/313 (49%), Positives = 230/313 (73%), Gaps = 1/313 (0%)
Query: 27 GSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNP 86
G+V IPL V +I+ G + + WQNIV +SR+PQ+ITAL+AGA L+ SGL +QT+FRNP
Sbjct: 27 GAVPIPLDHVMDILLGKGSDKIAWQNIVLQSRLPQAITALLAGASLATSGLLLQTLFRNP 86
Query: 87 LAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVF 146
LAGPS+LGIS GA+LGVA+++L G G + G +A+ +AA GA ++ LI++
Sbjct: 87 LAGPSILGISDGANLGVAAIMLYFGGTLG-QFTDWPISGYMAVILAAFVGACVILGLIIY 145
Query: 147 VSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLF 206
S KVK +V LLIIG+MIGY+A+++I + Y+S + + A+V+WGLG+F+ VS Q+ F
Sbjct: 146 FSAKVKNNVMLLIIGIMIGYLASSVISILNYYSSTDRVHAFVMWGLGNFSGVSLEQLPFF 205
Query: 207 IYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPV 266
+I L L+ LLIK LN LLLG+ YA NLG+ IKR R+ ++ C+G+LTA TA+CGP+
Sbjct: 206 GTCALIGLLLAILLIKPLNALLLGEMYAANLGIRIKRTRIAILLCTGVLTATTTAFCGPI 265
Query: 267 IFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALI 326
F+GLAVPH+ R +L +S+H++L+P +LTGS +ALLCN++ +PG LP+N++T ++
Sbjct: 266 SFVGLAVPHIARLMLGSSNHKMLVPVTMLTGSCVALLCNMLMVVPGSNTILPLNAVTPML 325
Query: 327 GAPIVVYVLFSKR 339
GAP+++YV+ +++
Sbjct: 326 GAPVIIYVIVNRK 338
>gi|156858590|gb|EDO52021.1| hypothetical protein BACUNI_04575 [Bacteroides uniformis ATCC 8492]
Length = 342
Score = 267 bits (682), Expect = 8e-70, Method: Composition-based stats.
Identities = 159/331 (48%), Positives = 232/331 (70%), Gaps = 2/331 (0%)
Query: 10 IFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAG 69
I + V I+ F NL++GSV IP V+ I+ G E W I+W+SR+PQ++TAL+ G
Sbjct: 9 IGLGVVILLLFAGNLLVGSVSIPPADVFRILLGGEGEKASWSFILWESRLPQALTALLCG 68
Query: 70 AGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIAL 129
L+V GL +QT F+NPLAGPS+LGI++GASLGVA V+LL G G + G ++
Sbjct: 69 GALAVCGLMLQTAFKNPLAGPSILGINAGASLGVAFVMLLFG--GSITAGVFSLSGFFSV 126
Query: 130 TIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVI 189
+ A GA+ +M LI+F S +K +V LLI G+MIGY+A++ I + +F+ E +++Y+I
Sbjct: 127 LLGAFIGAMLIMALILFFSTLIKSNVMLLITGIMIGYIASSAIALLNFFATAEGVQSYMI 186
Query: 190 WGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVI 249
WGLG+F VS QM F + I+ L S LLIK LN LLLG+ YA+NLG+NI+ R +++
Sbjct: 187 WGLGNFGGVSLQQMPAFALVTIVGLFGSLLLIKPLNALLLGERYAENLGVNIRCVRNWLL 246
Query: 250 SCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIAR 309
+G+LTA+ TA+CGPV F+GLAVPH+ R +L T++H L+P IL+G ++ALLCNLI
Sbjct: 247 IITGLLTAVTTAFCGPVAFIGLAVPHVARMILGTANHNSLLPVTILSGGAVALLCNLICV 306
Query: 310 MPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+PG G +P+N++T +IGAP+++YV+ S+RK
Sbjct: 307 LPGEAGIIPLNAVTPIIGAPVIIYVILSQRK 337
>gi|21673250|ref|NP_661315.1| iron(III) ABC transporter, permease protein, putative [Chlorobium
tepidum TLS]
gi|21646336|gb|AAM71657.1| iron(III) ABC transporter, permease protein, putative [Chlorobium
tepidum TLS]
Length = 362
Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats.
Identities = 157/318 (49%), Positives = 232/318 (72%), Gaps = 1/318 (0%)
Query: 23 NLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTV 82
++ LGSV IPL+SV I+ GS +EPV WQ IV R+P++ITA++AGA LS SGLQMQT+
Sbjct: 38 DIALGSVSIPLKSVVAILFGSDQEPVAWQKIVTTIRLPKAITAVIAGAALSASGLQMQTL 97
Query: 83 FRNPLAGPSVLGISSGASLGVASVILLSGSIGGV-ALSKLGYIGEIALTIAATAGALSVM 141
FRNPLAGPSVLGIS+GASLGVA V+L+SGS A+ +LG G + IA++ GA +V+
Sbjct: 98 FRNPLAGPSVLGISAGASLGVAMVMLVSGSAANAFAIRQLGLGGSWLIVIASSLGAAAVL 157
Query: 142 TLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGN 201
+++ ++ K+K +V LLI+G+M+G + ++I +++YFS E I+ Y+IW GS V GN
Sbjct: 158 LVVLAIAVKIKDNVVLLIVGIMVGNITVSLISIWQYFSEPEQIQDYLIWTFGSLGGVLGN 217
Query: 202 QMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTA 261
Q+ + ++ L +SF K LN++LLG+ YAK+LG++ R+ VI+ + +L VT
Sbjct: 218 QLWVLGIVVGAGLLVSFAASKPLNVMLLGENYAKSLGMSTFSIRITVIAATSLLAGSVTG 277
Query: 262 YCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNS 321
+CGP+ F+G+AVPHL R +L TSDHR LMP++ L G+ L L+C++IA+MPG + LP+N
Sbjct: 278 FCGPIGFIGIAVPHLTRSILNTSDHRFLMPSSCLVGAILMLVCDIIAQMPGNQTTLPINV 337
Query: 322 ITALIGAPIVVYVLFSKR 339
+TALIG+P+V++V+ +R
Sbjct: 338 VTALIGSPVVIWVIIRQR 355
>gi|148657196|ref|YP_001277401.1| transport system permease protein [Roseiflexus sp. RS-1]
gi|148569306|gb|ABQ91451.1| transport system permease protein [Roseiflexus sp. RS-1]
Length = 371
Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats.
Identities = 162/323 (50%), Positives = 233/323 (72%)
Query: 16 IVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVS 75
++ F L+L GSV IPL V I+ G E W I++ R+P+++TA +AGA L VS
Sbjct: 40 MILAFLLSLSFGSVRIPLEQVLTILLGGQAERASWTTIIYDFRLPKALTAALAGAALGVS 99
Query: 76 GLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATA 135
GLQMQT+FRNPLA P VLG+SSGASLGVA V+L G L+ G IG ++L AA+
Sbjct: 100 GLQMQTLFRNPLADPFVLGVSSGASLGVALVVLSVGVANTTLLAVTGLIGNLSLAAAASI 159
Query: 136 GALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSF 195
GA +V+ L++ ++Q+V+ SVTLLI+G+MIGY+A AI+ + YFS+ E I+AY+ WG GSF
Sbjct: 160 GAGAVLALVLTLAQRVQNSVTLLILGLMIGYIAGAIVSLLLYFSIAERIQAYIAWGFGSF 219
Query: 196 ARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGIL 255
V+ ++M + ++ I L L+ +L K+LN LLLG+ YA++LG++I+RAR +++ S +L
Sbjct: 220 GGVTWSRMHVLAPVVGIGLLLALILTKSLNALLLGEAYARSLGVDIRRARTGIVASSALL 279
Query: 256 TAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEG 315
VTA+CGP+ FLG+A+PHLCR LLR++DHR+L+PA IL G++ ALL +L A+ PG
Sbjct: 280 AGAVTAFCGPIAFLGIAIPHLCRALLRSADHRLLIPACILVGATTALLADLFAQAPGMSV 339
Query: 316 ALPVNSITALIGAPIVVYVLFSK 338
LP+N+ITALIGAP V+++L +
Sbjct: 340 VLPLNAITALIGAPTVIWILLRR 362
>gi|75812444|ref|YP_320063.1| transport system permease protein [Anabaena variabilis ATCC 29413]
gi|75705200|gb|ABA24874.1| transport system permease protein [Anabaena variabilis ATCC 29413]
Length = 359
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 152/332 (45%), Positives = 232/332 (69%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITAL 66
L + +S+ +V F L+L LGSV IP++ V NI+ G E W NI+ K R+P+++TA
Sbjct: 22 LAFLLLSIGLVVAFLLDLALGSVSIPIQEVINILLGQEPEKATWANIILKFRLPKAVTAT 81
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGE 126
+AGA L VSGLQMQT+F+NPLAGP VLGISSGASLGVA V+L + L+ LG I +
Sbjct: 82 LAGAALGVSGLQMQTLFKNPLAGPFVLGISSGASLGVALVVLTASVATPNLLNDLGIITD 141
Query: 127 IALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRA 186
L IAA+ GA +V+ L++ V+++V+ ++TLLI+G++ GY +AI+ + FS E I++
Sbjct: 142 FGLVIAASLGAAAVLGLMLVVARRVQETMTLLILGLLFGYATSAIVSILLQFSSRERIQS 201
Query: 187 YVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARL 246
Y++W GSFA V+ Q+ + I +++ L ++ L K+LN LLLG+ YA++LGL +++AR
Sbjct: 202 YIMWTFGSFAGVTWKQLIVLIPVIVCSLLVAVLQSKSLNALLLGEAYARSLGLTVEKARF 261
Query: 247 YVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNL 306
+I + IL +TA+CGP+ FLG+A+PHLCR L +SDHR+L+P ++ G LAL+ +L
Sbjct: 262 SIIGSASILAGGITAFCGPIAFLGVAIPHLCRSLFMSSDHRILIPGVMIMGGILALVADL 321
Query: 307 IARMPGFEGALPVNSITALIGAPIVVYVLFSK 338
+++ + LP+N+ITALIG P+V +V+ +
Sbjct: 322 FSQLAVSQMVLPLNAITALIGTPVVTWVILRR 353
>gi|68552679|ref|ZP_00592066.1| transport system permease protein [Prosthecochloris aestuarii DSM
271]
gi|68240479|gb|EAN22753.1| transport system permease protein [Prosthecochloris aestuarii DSM
271]
Length = 362
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 149/314 (47%), Positives = 225/314 (71%), Gaps = 1/314 (0%)
Query: 27 GSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNP 86
GSV IPL SV +I+ G+ + W IV R+P+++TA++AGA LSVSGLQMQT+FRNP
Sbjct: 42 GSVRIPLPSVVSILMGNGSDIEAWDKIVTYIRLPKALTAVLAGAALSVSGLQMQTLFRNP 101
Query: 87 LAGPSVLGISSGASLGVASVILLSGSIGGV-ALSKLGYIGEIALTIAATAGALSVMTLIV 145
LAGPSVLGIS+GASLGVA V+L SGS A+ +LG G + I+AT GA V+ +++
Sbjct: 102 LAGPSVLGISAGASLGVAMVMLASGSAANAFAIRQLGLGGSWLIVISATLGAACVLLVVL 161
Query: 146 FVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTL 205
++ ++K ++ LLI+G+M+G + ++I +++YFS E+I+ Y+IW GS V GNQ+ +
Sbjct: 162 AIAVRIKDNIVLLIVGIMVGNMTVSLISIWQYFSEPEEIQDYLIWTFGSLGGVLGNQLWV 221
Query: 206 FIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGP 265
++ I L +SF K+LN++LLG+ YA++LG++ R+ VI+ + +L VT +CGP
Sbjct: 222 LAAVIGIGLLVSFAASKSLNVMLLGENYARSLGMSTFYVRVTVIAATSLLAGSVTGFCGP 281
Query: 266 VIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITAL 325
+ F+G+AVPHL R +L TSDHR LMP L G+ + L+C++IA+MPG + LP+N++TAL
Sbjct: 282 IGFIGIAVPHLTRSILDTSDHRFLMPGVCLMGALVMLVCDIIAQMPGSQTTLPINAVTAL 341
Query: 326 IGAPIVVYVLFSKR 339
IG+P+V++V+ R
Sbjct: 342 IGSPVVIWVIMKNR 355
>gi|88601590|ref|YP_501768.1| transport system permease protein [Methanospirillum hungatei JF-1]
gi|88187052|gb|ABD40049.1| transport system permease protein [Methanospirillum hungatei JF-1]
Length = 360
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 147/321 (45%), Positives = 226/321 (70%), Gaps = 1/321 (0%)
Query: 24 LVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVF 83
LVLGSV IP + I+ G W I++ R+P+++ L AGA L+++GL MQT+F
Sbjct: 36 LVLGSVAIPYPEIVRILTGQGSSHDSWIMIIYNFRLPKAMVGLCAGACLAIAGLFMQTLF 95
Query: 84 RNPLAGPSVLGISSGASLGVASVILLSGSIGGVA-LSKLGYIGEIALTIAATAGALSVMT 142
RNPLAGP VLG+S+GA LGVA V+L +G+ G + L LG+ G + + IAA+ G+ V+
Sbjct: 96 RNPLAGPDVLGLSAGAGLGVAIVVLSAGTAGASSILGNLGFFGSVGIAIAASFGSGLVLL 155
Query: 143 LIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQ 202
+I+ VS++V+ S+TLLI+G+M GY AN+ I + +F++ E I+AY IW GSF + +Q
Sbjct: 156 MILAVSKRVQNSMTLLILGLMFGYTANSFISILMHFALAERIQAYTIWSFGSFGGATWDQ 215
Query: 203 MTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAY 262
+ + + ++ L S LIK LN+LLLGD YA+++GL++ R R + + +L+ +VTA+
Sbjct: 216 IQVLVLFAVLGLIYSISLIKHLNVLLLGDQYAESMGLDLIRTRNKIFIITAVLSGVVTAF 275
Query: 263 CGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSI 322
CGP+ F+G++VPHLCR L T++H +L+PA IL G+ LAL ++IA +PG+ LP+N+I
Sbjct: 276 CGPIGFIGISVPHLCRALFATANHCILIPACILLGACLALTADIIASVPGYSITLPLNAI 335
Query: 323 TALIGAPIVVYVLFSKRKNEM 343
T+LIGAP+V++++FSK +N M
Sbjct: 336 TSLIGAPVVIWIIFSKSRNGM 356
>gi|124002394|ref|ZP_01687247.1| permease protein of iron(III) ABC transporter [Microscilla marina
ATCC 23134]
gi|123992223|gb|EAY31591.1| permease protein of iron(III) ABC transporter [Microscilla marina
ATCC 23134]
Length = 360
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 148/333 (44%), Positives = 239/333 (71%), Gaps = 1/333 (0%)
Query: 8 VLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALV 67
+L+ ++ ++V F ++L LGSV IPL+ + I+ G W NI+ + RVPQ+ITA++
Sbjct: 22 LLVGLATALVVVFVIDLTLGSVAIPLKQIIQIIAGQDSGNFAWNNIIHQIRVPQAITAML 81
Query: 68 AGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGV-ALSKLGYIGE 126
AGA LS+ GLQMQT+FRNPLAGPS+LGI++G+SLGVA ++L SGS+ GV ++ G +
Sbjct: 82 AGAALSLGGLQMQTLFRNPLAGPSILGITAGSSLGVAVIMLASGSVIGVTSIVSTGLLSS 141
Query: 127 IALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRA 186
+ +AA G+ V+ L++ VS +++ +V +LI+G+M+G + A++ V++YFS E I+
Sbjct: 142 WLIVMAAVTGSAMVLALVLLVSLRIRDNVVVLIVGMMVGNITIALVSVWQYFSEPEQIQD 201
Query: 187 YVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARL 246
Y++W GS V+ + + + + + +S L+ KTLN LLLG+ YA++LGL+I+R+R+
Sbjct: 202 YLMWTFGSLGGVTHHHLMVLSMAVGAGIVVSLLITKTLNTLLLGENYAQSLGLSIRRSRI 261
Query: 247 YVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNL 306
VI+ + +L VTA+CGP+ F+G+AVPHL R LL +SDHR+L+PA + G+ L L+C++
Sbjct: 262 LVIAVTSLLAGSVTAFCGPIGFVGIAVPHLTRSLLNSSDHRLLVPAVCMLGAVLMLICDI 321
Query: 307 IARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
IA++PG LP+N++TAL+GAP+V++V+ +R
Sbjct: 322 IAKVPGSHVTLPINAVTALVGAPVVIFVIVKRR 354
>gi|154491849|ref|ZP_02031475.1| hypothetical protein PARMER_01473 [Parabacteroides merdae ATCC
43184]
gi|154088090|gb|EDN87135.1| hypothetical protein PARMER_01473 [Parabacteroides merdae ATCC
43184]
Length = 344
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 158/314 (50%), Positives = 234/314 (74%), Gaps = 3/314 (0%)
Query: 27 GSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNP 86
G+V IP+ SV NI+ G E + WQNIV +SR PQ++TAL+AGA L+VSGL +QT+FRNP
Sbjct: 27 GAVSIPVESVVNILLGEGTERLAWQNIVLQSRFPQAVTALLAGASLAVSGLLLQTLFRNP 86
Query: 87 LAGPSVLGISSGASLGVASVIL-LSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
LAGPS+LGIS GA+LGVA+++L GS+ V + L G +A+ +AA +GA ++ LI+
Sbjct: 87 LAGPSILGISDGANLGVAAIMLYFGGSLSMV--TDLPISGYLAVIMAAFSGAACILGLII 144
Query: 146 FVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTL 205
+ S KVK +V LLIIG+MIGY+A+++I V Y++ + + A+V+WGLG+F+ VS Q+
Sbjct: 145 YFSAKVKNNVMLLIIGIMIGYLASSLISVLNYYASTDKVHAFVMWGLGNFSGVSLQQLPY 204
Query: 206 FIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGP 265
F I L L+ LLIK LN LLLG+ YA NLG+ I+R R+ ++ C+G+LTA TA+CGP
Sbjct: 205 FAGFTCIGLLLAILLIKPLNALLLGEMYAANLGIKIRRTRILILLCTGLLTATTTAFCGP 264
Query: 266 VIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITAL 325
+ F+GLAVPH+ R +L +S+H++L+P +LTGS +ALLCNL+ +PG LP+N++T +
Sbjct: 265 ISFIGLAVPHVARLMLGSSNHKMLVPVTLLTGSCIALLCNLLMVLPGTHNILPLNAVTPM 324
Query: 326 IGAPIVVYVLFSKR 339
+GAP+++YV+ +++
Sbjct: 325 LGAPVIIYVIVNRK 338
>gi|17231524|ref|NP_488072.1| permease protein of iron(III) ABC transporter [Nostoc sp. PCC 7120]
gi|17133167|dbj|BAB75731.1| permease protein of iron(III) ABC transporter [Nostoc sp. PCC 7120]
Length = 362
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 150/336 (44%), Positives = 233/336 (69%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITAL 66
L+ + + ++ F L+L LGSV IP+ V NI+ G E +I+ K R+P+++TA
Sbjct: 23 LIFSVLLIGLLCAFLLDLALGSVDIPINEVVNILLGQEPEKATHAHIILKFRLPKALTAT 82
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGE 126
+AGA L VSGLQMQT+F+NPLAGP VLGISSGASLGVA V+L + L+ LG I +
Sbjct: 83 LAGAALGVSGLQMQTLFKNPLAGPFVLGISSGASLGVALVVLTASVTTPTLLTDLGIISD 142
Query: 127 IALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRA 186
L IAA+ GA SV+ +++ VS++V+ ++TLLI+G++ GY +AI+ + FS +E I+
Sbjct: 143 FGLVIAASLGAASVLGMMLVVSRRVQDTMTLLILGLLFGYATSAIVSILLQFSSKERIQN 202
Query: 187 YVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARL 246
Y++W GSFA V+ Q+ + I ++++ L ++ L K+LN LLLG+ YA++LGL +++ R
Sbjct: 203 YIMWTFGSFAGVTWKQLIVLIPVIVLSLLVAVLQSKSLNALLLGETYARSLGLTVQKTRF 262
Query: 247 YVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNL 306
+I+ + IL +TA+CGP+ FLG+A+PHLCR L TSDHR+L+P+ I+ G+ LAL+ +L
Sbjct: 263 SIITSASILAGAITAFCGPIAFLGVAIPHLCRSLFNTSDHRMLIPSVIIMGAILALIADL 322
Query: 307 IARMPGFEGALPVNSITALIGAPIVVYVLFSKRKNE 342
+++ + LP+N+ITALIG P+V +V+ + +
Sbjct: 323 FSQLWVSQMVLPLNAITALIGTPVVTWVILRRNSQK 358
>gi|67917542|ref|ZP_00511148.1| transport system permease protein [Chlorobium limicola DSM 245]
gi|67784845|gb|EAM44218.1| transport system permease protein [Chlorobium limicola DSM 245]
Length = 364
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 148/314 (47%), Positives = 224/314 (71%), Gaps = 1/314 (0%)
Query: 27 GSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNP 86
GSV IPL SV I+ G E W+ I+ R+P++ TA++AGA LSVSGLQMQT+FRNP
Sbjct: 44 GSVQIPLESVIGILLGRGAEHPAWEKIITAIRLPKAATAVIAGAALSVSGLQMQTLFRNP 103
Query: 87 LAGPSVLGISSGASLGVASVILLSG-SIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
LAGPSVLGIS+GASLGVA V+L SG + A+ +LG+ G + IAAT GA++V+ +++
Sbjct: 104 LAGPSVLGISAGASLGVAVVMLASGGAANAFAIRQLGFGGSWLIVIAATLGAMAVLLIVL 163
Query: 146 FVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTL 205
++ +++ +V LLI+G+M+G + ++I +++YFS E I+ Y+IW GS V G Q+ +
Sbjct: 164 GIAVRIRDNVVLLIVGIMVGNITISLISIWQYFSEPEQIQDYLIWTFGSLGGVLGPQLAV 223
Query: 206 FIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGP 265
++ + L +SF K+LN+LLLG+ YA++LG++ R+ VI+ + +L VT +CGP
Sbjct: 224 LGAVVALGLLVSFSASKSLNVLLLGENYARSLGMSTFFVRVSVIAATSLLAGSVTGFCGP 283
Query: 266 VIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITAL 325
+ F+G+AVPHL R +L TSDHR LMP+ L G L L C+++A+MPG + LP+N++TAL
Sbjct: 284 IGFIGIAVPHLTRSMLDTSDHRFLMPSCCLVGGILMLACDIVAQMPGTQTTLPINAVTAL 343
Query: 326 IGAPIVVYVLFSKR 339
IG+P+V++V+ +R
Sbjct: 344 IGSPVVIWVIMKQR 357
>gi|76260847|ref|ZP_00768475.1| transport system permease protein [Chloroflexus aurantiacus
J-10-fl]
gi|76164280|gb|EAO58432.1| transport system permease protein [Chloroflexus aurantiacus
J-10-fl]
Length = 362
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 158/334 (47%), Positives = 235/334 (70%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITAL 66
LVL+ + + F L+L LGSV IP V +I+ E W I++ R+P+++TA
Sbjct: 24 LVLLAMVGVTLCIFLLSLSLGSVSIPPEQVLSILLYQEAERKSWVTIIYDFRLPKALTAA 83
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGE 126
+AGA L VSGLQMQT+FRNPLA P VLGISSGASLGVA V+L G+ L+ G +G
Sbjct: 84 LAGAALGVSGLQMQTLFRNPLADPFVLGISSGASLGVAIVVLSVGAANTALLAVAGLLGN 143
Query: 127 IALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRA 186
++L +AA+ GA VM +I+ ++Q+V+ S+TLLI+G+MIGYV +A++ + YFS+ E I+A
Sbjct: 144 VSLVVAASLGAGMVMMIILTLAQRVRSSITLLILGLMIGYVTSAVVSLLLYFSIAERIQA 203
Query: 187 YVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARL 246
Y+ W G+F V+ +QM + + I L L+ LL K LN LLLG+ YA+++G++I+ AR
Sbjct: 204 YIAWSFGNFGGVTWSQMQVLAPTIGIGLILALLLTKVLNALLLGEAYARSMGMDIQLARC 263
Query: 247 YVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNL 306
++ S +L +TA+CGP+ FLG+A+PHLCR L RT+DHR+L+PA + G+++ALL +L
Sbjct: 264 GIVLSSSVLAGTITAFCGPIAFLGIAIPHLCRALFRTADHRILLPACMWIGATIALLGDL 323
Query: 307 IARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
IA++PG+ LP+N+I AL GAPIV++V+ + +
Sbjct: 324 IAQVPGYSIVLPLNAINALFGAPIVMWVVLQRYR 357
>gi|150004597|ref|YP_001299341.1| iron(III) ABC transporter putative permease protein [Bacteroides
vulgatus ATCC 8482]
gi|149933021|gb|ABR39719.1| iron(III) ABC transporter putative permease protein [Bacteroides
vulgatus ATCC 8482]
Length = 343
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 154/318 (48%), Positives = 226/318 (71%), Gaps = 2/318 (0%)
Query: 23 NLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTV 82
NL+ GSV+IP +VW+I+ G+ E W IVW+SR+PQ+ITAL+ G L+ SGL +QT
Sbjct: 23 NLLFGSVNIPADAVWHILTGNEVEKASWSFIVWESRLPQAITALLCGMALAASGLMLQTT 82
Query: 83 FRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMT 142
F NPLA PS+LGISSGASLGVA +++L+G+ G + G +++ I A G++ VM
Sbjct: 83 FNNPLADPSILGISSGASLGVA-LVMLAGA-GTITAGVFTLSGFLSVIIGAFIGSMLVMG 140
Query: 143 LIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQ 202
+I+F S +K S+ LLIIG+MIGY+ ++ I + +FS E + +Y+IWG+G+F VS Q
Sbjct: 141 IILFFSTLIKNSIMLLIIGIMIGYITSSAISLLNFFSTAEGVHSYMIWGMGNFGGVSLQQ 200
Query: 203 MTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAY 262
+ F + + L ++ LLIK LN LLLG YA+NLG+NI+R R ++ +G+LTA TA+
Sbjct: 201 LPFFSLVTMAGLLITILLIKPLNALLLGTRYAENLGINIRRTRNLLLVATGLLTATTTAF 260
Query: 263 CGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSI 322
CGP+ F+GLAVPH+ R +L TS+H L+P +LTG ++ALLCN I +PG G +P+N++
Sbjct: 261 CGPISFIGLAVPHIARLMLGTSNHNSLLPVTMLTGGAIALLCNFICILPGEAGIIPLNAV 320
Query: 323 TALIGAPIVVYVLFSKRK 340
T +IGAPI++YV+ ++RK
Sbjct: 321 TPVIGAPIIIYVIVNQRK 338
>gi|86133177|ref|ZP_01051759.1| iron(III) ABC transporter, permease protein, putative
[Tenacibaculum sp. MED152]
gi|85820040|gb|EAQ41187.1| iron(III) ABC transporter, permease protein, putative [Polaribacter
dokdonensis MED152]
Length = 323
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 143/321 (44%), Positives = 218/321 (67%), Gaps = 2/321 (0%)
Query: 20 FFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQM 79
FF+N+ LGSV IP+ ++ + G W I+ R+P++ITA++ G+GLS+ GL M
Sbjct: 2 FFVNVSLGSVSIPIEDIFTTLFGGLPTKESWTTIILNYRLPKAITAILVGSGLSICGLLM 61
Query: 80 QTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALS 139
QT+FRNPLAGP VLGISSGASLGVA +IL S +GG+ +S + +L IAA+ GA
Sbjct: 62 QTLFRNPLAGPFVLGISSGASLGVALLILGSSFLGGILISP--NLSSWSLPIAASLGAFL 119
Query: 140 VMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVS 199
V+T ++ + KV+ +++LIIG+M G + +A+I V YFS E I+ Y+ W GS +S
Sbjct: 120 VLTAVIVAANKVRNIMSILIIGLMFGSLTSALISVLAYFSQAEQIQQYLFWSFGSLGNLS 179
Query: 200 GNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIV 259
++++F I I + S ++IK LN LLG+ YAK+LG+NIKR R ++ + IL ++
Sbjct: 180 WTEISVFASIYGIGMLGSLIIIKPLNSFLLGENYAKSLGINIKRNRNIILLITSILAGVI 239
Query: 260 TAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPV 319
TA+ GP+ F+GLAVPH+ + L TS+H++L+P+ L G + L+C+ IA++P E LP+
Sbjct: 240 TAFSGPIAFVGLAVPHIAKLLFTTSNHKILIPSVALLGGIILLICDAIAQLPTSEFTLPI 299
Query: 320 NSITALIGAPIVVYVLFSKRK 340
N+IT+L GAP+V+++L K+K
Sbjct: 300 NAITSLFGAPVVIWLLIRKKK 320
>gi|149372082|ref|ZP_01891352.1| iron(III) ABC transporter, permease protein, putative [unidentified
eubacterium SCB49]
gi|149354849|gb|EDM43411.1| iron(III) ABC transporter, permease protein, putative [unidentified
eubacterium SCB49]
Length = 344
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 149/324 (45%), Positives = 223/324 (68%), Gaps = 2/324 (0%)
Query: 17 VFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSG 76
+ FF+N+ LGSV+IP + + + E VW I+++ R+P++ITA+VAG GL++SG
Sbjct: 20 IVVFFINVSLGSVYIPFKEIITGLFTGNTEKSVWSLILFEYRIPKAITAIVAGGGLAISG 79
Query: 77 LQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAG 136
L MQTVFRNPLAGP VLG+SSGASLGVA +IL +G+ GG+ LG +L IAA G
Sbjct: 80 LLMQTVFRNPLAGPFVLGLSSGASLGVALLILGAGAFGGIFGMLLG--NSWSLVIAAALG 137
Query: 137 ALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFA 196
+ V+ ++ ++ KVK ++ +LIIG+M G V A++GV YFS E ++ YV W LGS
Sbjct: 138 SFLVLLAVLAMTVKVKDTMAILIIGLMFGSVTAAVVGVLSYFSSAEQLQQYVFWSLGSLG 197
Query: 197 RVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILT 256
S + + + I L ++ K+LN LLLG+ YAK++G+NIK+ L++I + IL
Sbjct: 198 NQSWTGVFILVSCFITGLIIALATSKSLNALLLGENYAKSMGINIKKQTLFIIIATSILA 257
Query: 257 AIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGA 316
+TA+ GP+ F+GLAVPHL R +++TS+H VL+PA L G+ L L+C+ IA++P E +
Sbjct: 258 GSITAFAGPIAFVGLAVPHLTRQIIKTSNHLVLIPAVTLMGAILLLVCDTIAQIPFSEYS 317
Query: 317 LPVNSITALIGAPIVVYVLFSKRK 340
LP+N+IT+++GAP+V+++L KRK
Sbjct: 318 LPINAITSIVGAPVVIWLLIRKRK 341
>gi|91216390|ref|ZP_01253357.1| iron(III) ABC transporter, permease protein, putative
[Psychroflexus torquis ATCC 700755]
gi|91185528|gb|EAS71904.1| iron(III) ABC transporter, permease protein, putative
[Psychroflexus torquis ATCC 700755]
Length = 340
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 137/319 (42%), Positives = 217/319 (68%), Gaps = 2/319 (0%)
Query: 22 LNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQT 81
L+L LGSV IP+ V I+ G E W+ I+ R+P+++TAL+ G+GL++SGL MQT
Sbjct: 21 LSLSLGSVSIPIDEVLKILLGLTTENSTWEYIIVNYRLPKTLTALLIGSGLAISGLLMQT 80
Query: 82 VFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVM 141
+FRNPLAGP VLG+SSGASLGVA +++ +G G+ + + ++ +AA+ G++ VM
Sbjct: 81 LFRNPLAGPYVLGLSSGASLGVAILLMGAGLFSGIFGEFM--FSKWSIILAASLGSILVM 138
Query: 142 TLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGN 201
++ +QKVK ++TLLIIG+M+ + +A++ V YFS E+++ Y+ W GS ++
Sbjct: 139 LAVLATAQKVKDTMTLLIIGLMVASLTSAVVSVLAYFSNAEELQLYIFWSFGSLGNLAWG 198
Query: 202 QMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTA 261
++ L I L L+ + +K LN LLLG+ YAK++G+ + R R+ +I + I TA
Sbjct: 199 EVGLLSLCWCIGLGLALICLKNLNALLLGENYAKSMGVKLNRNRILIILSTSIFAGSATA 258
Query: 262 YCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNS 321
+ GP+ F+GLAVPHL R L+ T+DH+VL+P I G+ L +LC++IA++PG E LP+N+
Sbjct: 259 FAGPIAFVGLAVPHLVRQLVTTNDHKVLLPNIIFGGAFLMILCDIIAQLPGSESTLPINA 318
Query: 322 ITALIGAPIVVYVLFSKRK 340
+T++ GAP+V+++L KRK
Sbjct: 319 VTSIFGAPVVIWLLVRKRK 337
>gi|86142722|ref|ZP_01061161.1| permease protein of iron(III) ABC transporter [Flavobacterium sp.
MED217]
gi|85830754|gb|EAQ49212.1| permease protein of iron(III) ABC transporter [Leeuwenhoekiella
blandensis MED217]
Length = 342
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 145/332 (43%), Positives = 220/332 (66%), Gaps = 5/332 (1%)
Query: 11 FISVSIVFF--FFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVA 68
FIS+ IV F N+ LGSV IPL ++ I+ G W I+ R+P+++ A++
Sbjct: 11 FISLGIVLLILFLSNIALGSVKIPLTAILKILLGDDSVKEAWTYIILDYRIPKALAAVLT 70
Query: 69 GAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIA 128
G+GL+V+GL MQT+F+NPLAGP VLGISSGASLGVA IL ++G A+ G I
Sbjct: 71 GSGLAVAGLMMQTLFKNPLAGPFVLGISSGASLGVAFFILGGSALGLTAVIAPNSWGTI- 129
Query: 129 LTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYV 188
IAA+ G+ +V+++++ V+ +V+ ++ LLIIG+M G + +A++ + YFS E+++ Y+
Sbjct: 130 --IAASLGSFAVLSVVILVAARVRDAMALLIIGLMFGSLTSAVVSILAYFSPAEELQRYM 187
Query: 189 IWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYV 248
W GS +S + + I L L+ + K+LN LLLGD YA+ LG++++++R +
Sbjct: 188 FWSFGSLGDISWKALGILSVCYFIGLLLALSITKSLNSLLLGDHYAQTLGVSLQKSRFII 247
Query: 249 ISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIA 308
+ + IL +TA+ GP+ F+GLAVPHL R S+H VLMPA IL G+ L LLC++IA
Sbjct: 248 LIATSILAGSLTAFVGPIAFVGLAVPHLIRQWFTASNHWVLMPACILGGAVLMLLCDIIA 307
Query: 309 RMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+MP F LP+N+IT+LIGAPIV+++L K+K
Sbjct: 308 QMPWFAFTLPINAITSLIGAPIVIWLLIRKKK 339
>gi|150025520|ref|YP_001296346.1| Probable ABC-type iron(III)-transport system, permease component
[Flavobacterium psychrophilum JIP02/86]
gi|149772061|emb|CAL43537.1| Probable ABC-type iron(III)-transport system, permease component
[Flavobacterium psychrophilum JIP02/86]
Length = 342
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 137/338 (40%), Positives = 223/338 (65%), Gaps = 3/338 (0%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
KR T+L I + + F FF+N+ GSV IP + V+ + G W+ I+ R+P+
Sbjct: 5 KRNTILFFALI-IGLFFLFFINISFGSVTIPFKEVYTSLTGGQASKSTWEYIILNYRLPK 63
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
+ITA++ G GLSVSGL MQT+FRNPLAGP VLG+SSGASLGVA VIL + + + +
Sbjct: 64 AITAILVGMGLSVSGLLMQTLFRNPLAGPYVLGLSSGASLGVAFVILGASYLPAILANY- 122
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVE 181
++ + +A+ +G+L V+ L++ VS++++ + +LI+G+M A A++ V YFS
Sbjct: 123 -FLSPYGIMLASCSGSLLVLFLVLLVSKQMRDTTIILIVGLMFSSFAGAVVSVLTYFSSA 181
Query: 182 EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNI 241
E ++ + W +GS +S NQ+ + + I L LS + IK L+ LLLG+ YA+++G+N
Sbjct: 182 EQLQKFTFWSMGSLGNLSWNQIVILFTSVTIGLFLSIMNIKALDALLLGENYARSMGINF 241
Query: 242 KRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLA 301
K+A+L +I + +L +TA+ GP+ F+GLAVPH+ + + TS+H VL + +L G+ +
Sbjct: 242 KKAKLVIIIATSLLAGSITAFAGPIAFIGLAVPHIAKIVFHTSNHWVLFWSTLLFGAIIM 301
Query: 302 LLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
L C+++++MPG LP+N+IT++IGAP+V+++L KR
Sbjct: 302 LFCDMVSQMPGTNITLPINAITSIIGAPVVIWLLVRKR 339
>gi|113938276|ref|ZP_01424145.1| transport system permease protein [Herpetosiphon aurantiacus ATCC
23779]
gi|113900066|gb|EAU19059.1| transport system permease protein [Herpetosiphon aurantiacus ATCC
23779]
Length = 391
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 138/341 (40%), Positives = 214/341 (62%), Gaps = 3/341 (0%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
KR + + + V + L+L SV IPL SV +I+ G W+ I+ R+P+
Sbjct: 48 KRRNIWLFGLLIVLSMVGVVLSLTWSSVDIPLSSVADILLGRPTAQPAWRTIIVDIRLPR 107
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
ITA++ G L ++GLQ+QT+FRNPLA P LG+SSGASLGVA VILL+ S G++ + L
Sbjct: 108 IITAILVGMALGLAGLQLQTIFRNPLAEPFTLGVSSGASLGVALVILLAPS-SGISFAAL 166
Query: 122 G--YIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFS 179
G G + +A G LSV+ +++ V+ +V+ +L++GV++ + A++ V +F+
Sbjct: 167 GSNVFGNLGTVGSAIVGGLSVLGIMMVVASRVRDMTIILLLGVILSAMTYALVTVLIFFA 226
Query: 180 VEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGL 239
E RA+V W LGSF RV ++ F+ + +I ++ L K LN LLLG+ YA++ G+
Sbjct: 227 NESQTRAFVEWQLGSFTRVRWGELRYFVPVTVIGALIACLTTKHLNALLLGEHYAQSSGI 286
Query: 240 NIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSS 299
N++RAR ++ + I+ V AY GP+ F+G+A+PHL RGL +TSDHRVL+PA ILTG
Sbjct: 287 NVQRARWIIMGSASIMAGTVVAYAGPIGFVGIAIPHLARGLFKTSDHRVLVPATILTGIP 346
Query: 300 LALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
AL C ++A +P LP+++ T+L GAP+ +VL ++
Sbjct: 347 FALACGILAEVPSSSLQLPIDAATSLFGAPVAAWVLLRMKR 387
>gi|126661897|ref|ZP_01732896.1| transport system permease protein [Flavobacteria bacterium BAL38]
gi|126625276|gb|EAZ95965.1| transport system permease protein [Flavobacteria bacterium BAL38]
Length = 341
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 134/318 (42%), Positives = 216/318 (67%), Gaps = 2/318 (0%)
Query: 23 NLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTV 82
N+ LGSV IPL+ V + W+ I+W R P++ITA++ G GLS+SGL MQT+
Sbjct: 25 NISLGSVSIPLKEVVKGLLSQEMSKESWEIILWNFRFPKAITAILVGIGLSMSGLLMQTL 84
Query: 83 FRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMT 142
FRNPLAGP VLG+SSGASLGVA +IL +G + S ++ + IA++ G+ V+
Sbjct: 85 FRNPLAGPYVLGLSSGASLGVAFIILGTGFLPTFISSF--FLSNYGIVIASSLGSFLVLM 142
Query: 143 LIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQ 202
++ VSQK+K ++ +LI+G+M G +AI+ V YF+ E ++ + W +GS + +S N+
Sbjct: 143 AVLLVSQKLKDTMAILIVGLMFGSFTSAIVSVLSYFTTAEKLQKFTFWSMGSISNLSWNE 202
Query: 203 MTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAY 262
++L ++I + +SF++IK LN LLLG+ YA+++G+N K+ R +I + IL +TA+
Sbjct: 203 ISLLSVFVVIGIGISFMVIKPLNALLLGEKYAQSIGINYKKTRFLIIIATSILAGSITAF 262
Query: 263 CGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSI 322
GP+ F+GLAVPH+ + L +TS+H VL + +L G+ + L C+ IA++PG + LP+N+I
Sbjct: 263 TGPIAFIGLAVPHMAKLLFQTSNHLVLFWSTLLVGAIVMLCCDTIAQVPGNDITLPINAI 322
Query: 323 TALIGAPIVVYVLFSKRK 340
T++IGAP+V+++L K++
Sbjct: 323 TSVIGAPVVIWLLVRKKR 340
>gi|50841596|ref|YP_054823.1| transporter (putative iron (III) permease) [Propionibacterium acnes
KPA171202]
gi|50839198|gb|AAT81865.1| transporter (putative iron (III) permease) [Propionibacterium acnes
KPA171202]
Length = 379
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 145/335 (43%), Positives = 217/335 (64%), Gaps = 8/335 (2%)
Query: 3 RYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQS 62
R+T+L IF++V++ L LGSV+IPL V +V G V I+ R P++
Sbjct: 41 RFTILAAIFVAVTLA-----GLALGSVNIPLGDVMTVVTGGTNVDPVSMTIIHDVREPRT 95
Query: 63 ITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVAL--SK 120
ITAL+ GA L +SGL+MQT+FRNPLA P VLGISSGASLGVA V+L + + G A S
Sbjct: 96 ITALLVGAALGMSGLEMQTLFRNPLADPYVLGISSGASLGVALVVLSTSASAGAATFASG 155
Query: 121 LGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSV 180
LG ++ + +AA GA V+ +++ + + S LL++GVMIGY ++ + V +
Sbjct: 156 LGIGPDLLIMVAAALGAAVVLLIVMLAGRFIHSSTILLLLGVMIGYFVSSGVTVLLSRAS 215
Query: 181 EEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLN 240
E I Y W GS+ V+ + + + I++ ++ S LL K LN LLLG+ YA+ +G+N
Sbjct: 216 PELIAQYTRWQFGSYHGVTWQNLRVMVPIIVAMILASLLLAKPLNALLLGERYAQTMGMN 275
Query: 241 IKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSL 300
+K R +++ + IL TA+CGP+ FLG+A+PHL RG+L T+DHR L+P ILTGSSL
Sbjct: 276 LKVVRTLLVASTAILAGAATAFCGPIGFLGIAIPHLTRGVLGTADHRHLLPGCILTGSSL 335
Query: 301 ALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
AL+ +++A++PG + LPVN++ A+ GAP+V+ +L
Sbjct: 336 ALMADILAQLPG-DDVLPVNAVNAVFGAPVVMVIL 369
>gi|120435438|ref|YP_861124.1| ABC-type transporter permease protein [Gramella forsetii KT0803]
gi|117577588|emb|CAL66057.1| ABC-type transporter permease protein [Gramella forsetii KT0803]
Length = 343
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 141/339 (41%), Positives = 229/339 (67%), Gaps = 3/339 (0%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
K+YT+ +I + ++++ LN+ LGSV+IP+ V + G E W+ I+ R+P+
Sbjct: 5 KKYTI-AIILLFLAVIITALLNISLGSVNIPIEEVTASLLGFEVEKNTWRYIILNYRLPK 63
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
+ITA++ G+GL+VSGL MQT+FRNPLAGP VLG+SSGASLGVA ++ + S+ G + + +
Sbjct: 64 AITAIITGSGLAVSGLLMQTLFRNPLAGPYVLGLSSGASLGVA-IVFMGASVFGASFATI 122
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVE 181
+ E +L IA++ G+L V+ ++ S +++ ++ +LIIG+M + AI+ V YFS
Sbjct: 123 -LLSEWSLVIASSLGSLLVLFAVILASIRLRDTMAILIIGLMFASLTAAIVSVLAYFSPA 181
Query: 182 EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNI 241
++ YV W GS +S N++ + II + ++ IK LN LLLG+ YA++LG NI
Sbjct: 182 SQLQQYVFWSYGSLGDLSWNEVLILGLFWIIGILIAIGSIKNLNSLLLGEQYARSLGTNI 241
Query: 242 KRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLA 301
++ R +I + +L +TA+ GP+ F+GLAVPHL R ++ +++H L+PA I G+ L
Sbjct: 242 RKNRFMIIIATSLLAGSITAFAGPIAFVGLAVPHLIRQIIPSANHITLVPAVIFGGAILM 301
Query: 302 LLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
L+C++IA++PG E +LP+N+IT+LIGAP+V+++L KRK
Sbjct: 302 LICDIIAQLPGSEFSLPINAITSLIGAPVVIWLLVRKRK 340
>gi|156742222|ref|YP_001432351.1| transport system permease protein [Roseiflexus castenholzii DSM
13941]
gi|156233550|gb|ABU58333.1| transport system permease protein [Roseiflexus castenholzii DSM
13941]
Length = 374
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 161/332 (48%), Positives = 228/332 (68%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITAL 66
L L+ + +V F L+L GSV IPL V I+ G E W+ I++ R+P+++TA
Sbjct: 34 LALVTMFGVLVGAFVLSLSFGSVRIPLEQVLMILLGGEAERATWKTIIFDFRLPKALTAT 93
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGE 126
+AGA L VSGLQMQT+FRNP+A P VLG+SSGASLGVA V+L G L+ G G
Sbjct: 94 LAGAALGVSGLQMQTLFRNPMADPFVLGVSSGASLGVALVVLSVGVANTTLLTVAGLPGN 153
Query: 127 IALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRA 186
++L AA+ GA +V+ L + ++Q+V+ SVTLLI+G+MIGY+ +A++ + YFS+ E I+A
Sbjct: 154 MSLAAAASIGAGAVLVLALTLAQRVQSSVTLLILGLMIGYLTSAVVSLLLYFSIAERIQA 213
Query: 187 YVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARL 246
YV W GSF V+ QM + + L L+ +L K LN LLLG+ YA+++GLNI+R R+
Sbjct: 214 YVAWSFGSFGGVTWTQMRVLAPAISAGLLLALVLAKALNALLLGEAYARSMGLNIRRTRV 273
Query: 247 YVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNL 306
I+ S +L VTA+CGP+ FLG+A+PHLCR LLR++DHRVL+PA L G++ ALL +L
Sbjct: 274 GTIASSAVLAGTVTAFCGPIAFLGIAIPHLCRALLRSADHRVLIPACALVGATAALLADL 333
Query: 307 IARMPGFEGALPVNSITALIGAPIVVYVLFSK 338
A+ PG LP+N+I ALIGAP VV+++ +
Sbjct: 334 AAQAPGTSVVLPLNAIMALIGAPTVVWIILRR 365
>gi|88803366|ref|ZP_01118892.1| iron(III) ABC transporter, permease protein, putative [Polaribacter
irgensii 23-P]
gi|88780932|gb|EAR12111.1| iron(III) ABC transporter, permease protein, putative [Polaribacter
irgensii 23-P]
Length = 342
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 138/314 (43%), Positives = 210/314 (66%), Gaps = 2/314 (0%)
Query: 27 GSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNP 86
GSV IP + +I+ G+ W I+ RVP++ITA++ G+GLSV+GL MQT+FRNP
Sbjct: 28 GSVSIPFYDILDILTGNISIKESWLTIILNFRVPKAITAILVGSGLSVAGLLMQTLFRNP 87
Query: 87 LAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVF 146
LAGP VLGISSGAS GVA IL G L+ I +L IA++ GA V++ ++
Sbjct: 88 LAGPFVLGISSGASFGVALFILGGSLFSGFLLTN--SISYWSLPIASSLGAFFVLSAVIV 145
Query: 147 VSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLF 206
+ KVK ++++LIIG+M G + A+I + YFS I+ ++ W GS +S N++ +F
Sbjct: 146 AANKVKNTMSILIIGLMFGSLTAALISILTYFSEASQIQQFLFWSFGSLGNLSWNELFIF 205
Query: 207 IYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPV 266
I I + + +IK LN LLLG+ YAK+ G+NIK++R ++ + ILT ++TA+ GP+
Sbjct: 206 SSIYGISILATLTIIKPLNSLLLGENYAKSTGINIKKSRNIILLITSILTGVITAFAGPI 265
Query: 267 IFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALI 326
F+GLAVPH+ R + T++H+VL+PA +L G+ + L+C+ IA++P E LP+N+IT+L
Sbjct: 266 AFIGLAVPHIARIIFSTANHKVLIPAVLLLGAIVMLICDTIAQLPASEFTLPINAITSLF 325
Query: 327 GAPIVVYVLFSKRK 340
GAPIV+++L K+K
Sbjct: 326 GAPIVIWLLIRKKK 339
>gi|146297848|ref|YP_001192439.1| transport system permease protein [Flavobacterium johnsoniae UW101]
gi|146152266|gb|ABQ03120.1| transport system permease protein [Flavobacterium johnsoniae UW101]
Length = 322
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 140/323 (43%), Positives = 217/323 (67%), Gaps = 10/323 (3%)
Query: 20 FFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQM 79
FF ++ LGSV IPL+ V++ + G W+ I+ R+P++ITA++ G GLS+SGL M
Sbjct: 2 FFASISLGSVTIPLKDVFSSLTGGHAAKSTWEYIIINYRLPKAITAVLVGTGLSISGLLM 61
Query: 80 QTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGG----VALSKLGYIGEIALTIAATA 135
QT+FRNPLAGP VLG+SSGASLGVA VIL +G + +ALS G + IA+T
Sbjct: 62 QTLFRNPLAGPYVLGLSSGASLGVAFVILGAGFLPSFLSVIALSSYG------IVIASTF 115
Query: 136 GALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSF 195
G+ V+ L++ VSQ+++ ++ +LI+G+M G AI+ V YFS E ++ + W +GS
Sbjct: 116 GSTLVLLLVLIVSQRLRDTMAILIVGLMFGSFTTAIVSVLTYFSTAEQLQKFTFWSMGSL 175
Query: 196 ARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGIL 255
+S + + + + + I L LS IK LN LLLG+ YAK++GLN +ARL +I + IL
Sbjct: 176 GNLSWSTIGILTFCVGIGLLLSAKSIKPLNALLLGENYAKSMGLNFNQARLIIIFATSIL 235
Query: 256 TAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEG 315
+ +TA+ GP+ F+GLAVPH+ + +TS+H +L + + GS + L C+++++MPGF+
Sbjct: 236 SGAITAFAGPIAFIGLAVPHIAKLTFQTSNHTILFWSTLFFGSIIMLFCDIVSQMPGFDV 295
Query: 316 ALPVNSITALIGAPIVVYVLFSK 338
LP+N+IT++IGAP+V+++L K
Sbjct: 296 TLPINAITSIIGAPVVIWLLVRK 318
>gi|86132362|ref|ZP_01050957.1| permease protein of iron(III) ABC transporter [Cellulophaga sp.
MED134]
gi|85817281|gb|EAQ38464.1| permease protein of iron(III) ABC transporter [Dokdonia donghaensis
MED134]
Length = 341
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 143/339 (42%), Positives = 223/339 (65%), Gaps = 4/339 (1%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
K Y + I + V +V F +N+ LGSV+IP V + + G W I+ R+P+
Sbjct: 4 KSYIIPFCILVFV-LVLCFIVNISLGSVNIPFTEVISGLLGGDVSKTSWLYIIVDYRLPK 62
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
+ITA++AGAGL+VSGL MQT+FRNPLAGP VLGISSGASLGVA IL ++G LS
Sbjct: 63 AITAIIAGAGLAVSGLLMQTLFRNPLAGPFVLGISSGASLGVALYILGGTALG---LSST 119
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVE 181
G+ L ++A+ G+ V+ +++ V+ ++K ++ LLIIG+M+G + +A++ V YFS
Sbjct: 120 LLSGKWGLIVSASVGSFLVLLMVLGVATRIKDTMALLIIGLMVGSLTSAVVSVLAYFSKA 179
Query: 182 EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNI 241
E+++ +V W GS VS + + I + + +K+LN LLLGD YA+ +G
Sbjct: 180 EELQRFVFWSFGSLGDVSWRGVGILSICFFIGIMGAVFCLKSLNSLLLGDAYARTIGTKF 239
Query: 242 KRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLA 301
++RL +I + +L +TA+ GP+ F+GLAVPHL R L+ T++HR+L+PA I+ G+ L
Sbjct: 240 SQSRLLIIIATSLLAGSITAFAGPIAFIGLAVPHLVRQLIPTANHRILLPAVIIGGAILM 299
Query: 302 LLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
L+C+ IA++P E LP+N+I+A++GAP+V+++L K+K
Sbjct: 300 LVCDTIAQVPYSEYTLPINAISAMVGAPVVIWLLVRKKK 338
>gi|88711967|ref|ZP_01106054.1| permease protein of iron(III) ABC transporter [Flavobacteriales
bacterium HTCC2170]
gi|88709373|gb|EAR01606.1| permease protein of iron(III) ABC transporter [Flavobacteriales
bacterium HTCC2170]
Length = 322
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 138/318 (43%), Positives = 218/318 (68%), Gaps = 2/318 (0%)
Query: 23 NLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTV 82
N+ LGSV IP + GS W IVW RVP+++TA++ G GL++SGL MQT+
Sbjct: 4 NISLGSVSIPFSETVKAILGSELNNGSWSYIVWNYRVPKALTAILVGGGLALSGLLMQTL 63
Query: 83 FRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMT 142
FRNPLAGP VLGISSGASLG A +I+ + G +G IG+I+L IA++ G+ V+
Sbjct: 64 FRNPLAGPFVLGISSGASLGAALLIMGASLFSG--FYAIGMIGDISLAIASSIGSFLVLL 121
Query: 143 LIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQ 202
++V V+ ++K ++ LLIIG+M G + A++ V YF+ E ++ Y+ W GS ++ Q
Sbjct: 122 VVVIVAYRIKDTMALLIIGLMFGSITAAVVSVLSYFTDAEKLQQYIYWSFGSVGNLTWQQ 181
Query: 203 MTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAY 262
+ + + I+ I + LS L IK LN LLLG+ YA++LG+++K++R +I+ +G+L +TA+
Sbjct: 182 LVILLAIVFIGVILSVLSIKALNSLLLGETYARSLGVDLKKSRYLIIAATGLLAGGITAF 241
Query: 263 CGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSI 322
GP+ F+GLAVPHL R + T+DHR+L+PA ++ G+ L L+C+ +A++P LP+N+I
Sbjct: 242 AGPIAFIGLAVPHLTRQIFNTTDHRILVPAVLIYGAILMLICDTVAQLPNSANVLPINAI 301
Query: 323 TALIGAPIVVYVLFSKRK 340
T+++GAP+V+++L K+K
Sbjct: 302 TSIVGAPVVIWLLVRKKK 319
>gi|126646695|ref|ZP_01719205.1| permease protein of iron(III) ABC transporter [Algoriphagus sp.
PR1]
gi|126576743|gb|EAZ80991.1| permease protein of iron(III) ABC transporter [Algoriphagus sp.
PR1]
Length = 342
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 140/334 (41%), Positives = 219/334 (65%), Gaps = 3/334 (0%)
Query: 5 TVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSIT 64
T L L+ ++ ++ F LN+ LGSV+I + + + I+ R+P+++
Sbjct: 6 TTLFLVGGAILLIIAFLLNVSLGSVYISIPEIIQGIFTGEWAKTSHSQIILNYRLPKALV 65
Query: 65 ALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYI 124
A++AG GLS+SGLQMQT FRNPLAGP VLGISSGA LGVA +++L+G+I G A S
Sbjct: 66 AILAGFGLSLSGLQMQTFFRNPLAGPFVLGISSGAGLGVA-ILMLAGTIFGFANSS--DF 122
Query: 125 GEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDI 184
A+ +A T GA V+ ++FV+ ++K S+TLLI+G+M G +AII V Y+S E +
Sbjct: 123 NAWAIALAGTLGASLVLLAVIFVAWRIKDSMTLLIVGLMFGSGVSAIISVLSYYSNAESL 182
Query: 185 RAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRA 244
+ + +W +GS + +Q+ + I+++ + L+K+ N +LLG+ YAK++G+N R
Sbjct: 183 KLFTVWSMGSLGGLGWSQVWVLCIIILLGIIPVIALVKSYNAMLLGESYAKSMGVNPTRV 242
Query: 245 RLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLC 304
R +I +G+L +TA+CGPV F+G+AVPHL R + +T+DHR+L PAA + G L LLC
Sbjct: 243 RWLMIISTGLLAGSITAFCGPVAFIGIAVPHLARMVWKTADHRILFPAAGIFGGILLLLC 302
Query: 305 NLIARMPGFEGALPVNSITALIGAPIVVYVLFSK 338
+ I+++PG LP+N++T+LIGAPIV+ ++ K
Sbjct: 303 DSISQLPGSAQTLPINAVTSLIGAPIVISLVLKK 336
>gi|83857626|ref|ZP_00951154.1| iron(III) ABC transporter, permease protein, putative [Croceibacter
atlanticus HTCC2559]
gi|83848993|gb|EAP86862.1| iron(III) ABC transporter, permease protein, putative [Croceibacter
atlanticus HTCC2559]
Length = 340
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 135/321 (42%), Positives = 212/321 (66%), Gaps = 2/321 (0%)
Query: 20 FFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQM 79
F N+ LGSV IPL +V + G + W+ I+ R+P+++TA+ G+GL++SGL M
Sbjct: 19 FLTNISLGSVSIPLDNVLAALFGGDVDKESWRYIITDYRLPKALTAIFVGSGLALSGLLM 78
Query: 80 QTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALS 139
QT+FRNPLAGP VLGISSGASLGVA +I+ + GGV S L IA IA++ G+
Sbjct: 79 QTLFRNPLAGPYVLGISSGASLGVAIIIMGASLFGGVFASYLNSGYSIA--IASSLGSFL 136
Query: 140 VMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVS 199
V+ +V S +++ ++ +LIIG+M + +++ V YFS ++ Y+ W GS +
Sbjct: 137 VLLAVVVASARLRDTMAILIIGLMFASLTASVVSVLAYFSSAAQLQQYMFWSFGSLGNLG 196
Query: 200 GNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIV 259
++++ + I + +S +K LN LLLG+ YAK+LG+NIK+ R +I + +L +
Sbjct: 197 WQELSILGVTVGIGVIVSIFCLKNLNALLLGEHYAKSLGVNIKKNRFLIIVATSLLAGSI 256
Query: 260 TAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPV 319
TA+ GP+ F+GLAVPHL R +++T++H +LMPA + G+ L L+C+ IA++P E LP+
Sbjct: 257 TAFAGPIAFIGLAVPHLVRLVIKTTNHLILMPAVLCFGAILMLICDAIAQLPNSEFTLPI 316
Query: 320 NSITALIGAPIVVYVLFSKRK 340
N+IT+L+GAP+V+++L KRK
Sbjct: 317 NAITSLVGAPVVIWLLVRKRK 337
>gi|60680710|ref|YP_210854.1| putative iron transport-related family system permease protein
[Bacteroides fragilis NCTC 9343]
gi|60492144|emb|CAH06907.1| putative iron transport-related family system permease protein
[Bacteroides fragilis NCTC 9343]
Length = 334
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 125/317 (39%), Positives = 213/317 (67%), Gaps = 7/317 (2%)
Query: 20 FFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQM 79
F ++ +GSV + +R VWN GS + ++++ I+ R+P+++TA++AGA LSV+G+ M
Sbjct: 18 FLADIAIGSVSLSIRDVWNTFIGSNDN-LIYREIILNHRLPKALTAILAGASLSVAGVLM 76
Query: 80 QTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALS 139
QT+F NPLAGP VLG++SGASLGVA +IL + S+ ++ G + AA GA+
Sbjct: 77 QTLFHNPLAGPDVLGVTSGASLGVALLILGTSSLPLWLITGWGQV------TAAIIGAIG 130
Query: 140 VMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVS 199
V+ L++ VS K+ +++LLIIG+M G A AI+ + + S + ++ ++ W GS + V
Sbjct: 131 VLLLVIIVSIKIPQTISLLIIGMMFGNFAGAIVSILQSMSNPDTLKLFITWTFGSLSSVG 190
Query: 200 GNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIV 259
QM++ ++ + + LL K LN+LLLG YA LG+++ R RL++I + +L
Sbjct: 191 WEQMSVMAPVIACGILTALLLQKQLNILLLGKNYANGLGVSVPRLRLWIILATALLAGTS 250
Query: 260 TAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPV 319
TA+ GP+ F+G+ +PH+ RGL + +HR+++PA++L G+ L+C+LI+++PG +G LP+
Sbjct: 251 TAFTGPIAFIGITMPHVARGLFGSPNHRIILPASMLCGAITLLVCDLISQLPGMQGTLPI 310
Query: 320 NSITALIGAPIVVYVLF 336
N++TAL G+PI+V+++
Sbjct: 311 NAVTALFGSPIIVWIIL 327
>gi|88806449|ref|ZP_01121966.1| permease protein of iron(III) ABC transporter [Robiginitalea
biformata HTCC2501]
gi|88783281|gb|EAR14453.1| permease protein of iron(III) ABC transporter [Robiginitalea
biformata HTCC2501]
Length = 343
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 136/324 (41%), Positives = 216/324 (66%), Gaps = 4/324 (1%)
Query: 20 FFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQM 79
F +NL LGSV IPL ++ + G W I+ + R+P+++TA++ G+GL++ GL M
Sbjct: 22 FLVNLSLGSVDIPLGDIFRWMAGGPLGETSWGYILREYRLPKALTAIITGSGLALCGLLM 81
Query: 80 QTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALS 139
QT+FRNPLAGP VLGISSGASLG A +I+ + +G VA + + +++L IA++ G+L
Sbjct: 82 QTLFRNPLAGPFVLGISSGASLGAALLIMGASLLGPVAAA--WAVSDLSLAIASSMGSLL 139
Query: 140 VMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVS 199
V+ +V V+ ++K ++ LLI+G+M G + A++ V F+ E ++ Y+ W GS +
Sbjct: 140 VLLTVVAVATRLKDAMALLIVGLMFGSITAAVVTVLSSFAQAERLQQYIFWSYGSVGNLG 199
Query: 200 GNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIV 259
Q+ + + I +S ++K LN LLLG+ YA++LG+ I+R RL ++ +G+L +
Sbjct: 200 WGQLGVLALVFAIGTGISIGMLKGLNALLLGEAYAQSLGIPIRRLRLGILLATGLLAGGI 259
Query: 260 TAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPV 319
TA+ GP+ F+GLAVPHL R LL TSDHR LMP +L G+ L L+C+ +A+MP LP+
Sbjct: 260 TAFAGPIAFVGLAVPHLTRQLLGTSDHRQLMPGVLLYGAILMLICDTVAQMPYSSYVLPI 319
Query: 320 NSITALIGAPIVVYVLFSKRKNEM 343
N+IT+++GAP+V+++L R+N M
Sbjct: 320 NAITSVVGAPVVIWLLL--RRNRM 341
>gi|53712511|ref|YP_098503.1| putative iron(III) ABC transporter permease protein [Bacteroides
fragilis YCH46]
gi|52215376|dbj|BAD47969.1| putative iron(III) ABC transporter permease protein [Bacteroides
fragilis YCH46]
Length = 334
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 124/317 (39%), Positives = 212/317 (66%), Gaps = 7/317 (2%)
Query: 20 FFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQM 79
F ++ +GSV + +R VWN GS + ++++ I+ R+P+++TA++AGA LSV+G+ M
Sbjct: 18 FLADIAIGSVSLSIRDVWNTFIGSNDN-LIYREIILNHRLPKALTAILAGASLSVAGVLM 76
Query: 80 QTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALS 139
QT+F NPLAGP VLG++SGASLGVA + L + S+ ++ G + AA GA+
Sbjct: 77 QTLFHNPLAGPDVLGVTSGASLGVALLTLGTSSLPLWLITGWGQV------TAAIIGAIG 130
Query: 140 VMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVS 199
V+ L++ VS K+ +++LLIIG+M G A AI+ + + S + ++ ++ W GS + V
Sbjct: 131 VLLLVIIVSIKIPQTISLLIIGMMFGNFAGAIVSILQSMSNPDTLKLFITWTFGSLSSVG 190
Query: 200 GNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIV 259
QM++ ++ + + LL K LN+LLLG YA LG+++ R RL++I + +L
Sbjct: 191 WEQMSVMAPVIACGILTALLLQKQLNILLLGKNYANGLGVSVPRLRLWIILATALLAGTS 250
Query: 260 TAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPV 319
TA+ GP+ F+G+ +PH+ RGL + +HR+++PA++L G+ L+C+LI+++PG +G LP+
Sbjct: 251 TAFTGPIAFIGITMPHVARGLFGSPNHRIILPASMLCGAITLLVCDLISQLPGMQGTLPI 310
Query: 320 NSITALIGAPIVVYVLF 336
N++TAL G+PI+V+++
Sbjct: 311 NAVTALFGSPIIVWIIL 327
>gi|89891466|ref|ZP_01202971.1| ABC-type iron (III) transport system, permease component
[Flavobacteria bacterium BBFL7]
gi|89516240|gb|EAS18902.1| ABC-type iron (III) transport system, permease component
[Flavobacteria bacterium BBFL7]
Length = 319
Score = 218 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 134/321 (41%), Positives = 219/321 (68%), Gaps = 7/321 (2%)
Query: 19 FFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQ 78
F ++ LG+V I +W+++ G+ I+ + R+P+++ A++ GAGL+++GL
Sbjct: 2 LFIADICLGTVFIKPHKIWDVLLGNNTN-ASENYIITQMRLPRAVMAILTGAGLAIAGLL 60
Query: 79 MQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGAL 138
MQT+FRNPLAGP VLGISSGA LGVA V++ S +G A+S LG L A+ G++
Sbjct: 61 MQTLFRNPLAGPFVLGISSGAGLGVALVVMGSAVLGISAVSGLG------LVTASIIGSV 114
Query: 139 SVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARV 198
VM LI+ +S ++K ++ LLI+G+M+G +++A++G+ YFS E ++ YV W LGS +
Sbjct: 115 LVMMLIIMMSLRIKDTMGLLIVGLMVGSLSSAVVGILSYFSSSEQLKRYVFWSLGSLGNL 174
Query: 199 SGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAI 258
+ + +I++I L L++K LN +LLG+ YA++LG+NIK R +I + +L
Sbjct: 175 EWENILILAFILLISSLLVILILKPLNAMLLGETYARSLGINIKTTRWIIIIITSLLAGS 234
Query: 259 VTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALP 318
+TA+ GP+ F+GLAVPHL R LL T +H++L+P A+L G+SL L C++I+++P +LP
Sbjct: 235 ITAFAGPIAFIGLAVPHLARLLLPTVNHKILLPTAVLLGASLLLACDIISQLPFSNYSLP 294
Query: 319 VNSITALIGAPIVVYVLFSKR 339
+N++T+LIGAP+V++++ KR
Sbjct: 295 INAVTSLIGAPLVIWLILRKR 315
>gi|156109620|gb|EDO11365.1| hypothetical protein BACOVA_03269 [Bacteroides ovatus ATCC 8483]
Length = 338
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 133/333 (39%), Positives = 211/333 (63%), Gaps = 8/333 (2%)
Query: 3 RYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQS 62
+ T + I + + + +++ G +IP+ VW ++ G + + +NI+ R +
Sbjct: 6 KRTPFLFITLGIVTILLLLIDMATGDTYIPITKVWAVLTGGECDEMT-RNILLSIRFIRV 64
Query: 63 ITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLG 122
+ A + G LSVSGLQMQTVF+NPLA P +LG+SSGA LGVA IL + +G L
Sbjct: 65 VVAALIGIALSVSGLQMQTVFQNPLADPYLLGVSSGAGLGVALFILGAPLLGWAEFPILQ 124
Query: 123 YIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEE 182
+G + + G ++ + +S+KVK + +LI+GVMIGYVA AII + +Y S E
Sbjct: 125 SLGIVG---SGWIGTAIILLGVAIISRKVKNILGVLIMGVMIGYVAGAIIQILQYLSSAE 181
Query: 183 DIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIK 242
++ + +W +GS + ++ Q+ + I ++ I L +S IK+LNLLLLG+ YA+ +G+NIK
Sbjct: 182 QLKMFTLWSMGSLSHITVTQLGIMIPMLCIGLLISVACIKSLNLLLLGENYARTMGMNIK 241
Query: 243 RARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLAL 302
R+R+++ + +LT VTA+CGPV F+GLAVPH+ R L +DHR+L+P +LTG L
Sbjct: 242 RSRMFIFVSTALLTGTVTAFCGPVGFIGLAVPHVTRLLFNNADHRILVPGTMLTGLISML 301
Query: 303 LCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
LC++IA+ + LPVN ITAL+G P++++V+
Sbjct: 302 LCDIIAK----KFLLPVNCITALLGVPVILWVI 330
>gi|153808821|ref|ZP_01961489.1| hypothetical protein BACCAC_03121 [Bacteroides caccae ATCC 43185]
gi|149128647|gb|EDM19865.1| hypothetical protein BACCAC_03121 [Bacteroides caccae ATCC 43185]
Length = 338
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 133/334 (39%), Positives = 212/334 (63%), Gaps = 8/334 (2%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
+++T L+ I + + + +++ G +IP+ VW ++ G + + +NI+ R +
Sbjct: 5 RKHTALLFIALGIIALLLLVIDMATGDTYIPVSKVWAVLTGGECDEMT-RNILLSIRFIR 63
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
I A + G LSVSGLQMQTVF+NPLA P +LG+SSGA LGVA IL + +G S+
Sbjct: 64 VIVAALIGVALSVSGLQMQTVFQNPLADPYLLGVSSGAGLGVALFILGAPLLG---WSEF 120
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVE 181
+ + + + G ++ + +S+KVK + +LI+GVMIGYVA AII + +Y S
Sbjct: 121 PLLQSLGIVGSGWIGTAVILLGVAVISRKVKNILGVLIMGVMIGYVAGAIIQILQYLSSA 180
Query: 182 EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNI 241
E ++ + +W +GS ++ Q+ + ++ + L +S + IK LNLLLLG+ YA+ +G+NI
Sbjct: 181 EQLKMFTLWSMGSLGHITTTQLGIMTPMLCLGLLISIVCIKPLNLLLLGENYARTMGMNI 240
Query: 242 KRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLA 301
KR+R + + +LT VTA+CGPV F+GLAVPH+ R L +DHR+L+PA +LTG
Sbjct: 241 KRSRTLIFISTALLTGTVTAFCGPVGFIGLAVPHVTRLLFNNADHRILVPATMLTGLISM 300
Query: 302 LLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
LLC++IA+ + LPVN ITAL+G P++++V+
Sbjct: 301 LLCDIIAK----KFLLPVNCITALLGVPVILWVI 330
>gi|53714315|ref|YP_100307.1| iron(III) ABC transporter permease protein [Bacteroides fragilis
YCH46]
gi|52217180|dbj|BAD49773.1| iron(III) ABC transporter permease protein [Bacteroides fragilis
YCH46]
Length = 326
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 147/337 (43%), Positives = 216/337 (64%), Gaps = 18/337 (5%)
Query: 3 RYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQS 62
R T+L I I+++ V F L+L +G+V+IP+R VW + G + IV R+ ++
Sbjct: 4 RSTILFSILITLT-VGLFLLDLAVGAVNIPIRDVWAALTGGNCSRAT-EKIVLNIRLIKA 61
Query: 63 ITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLG 122
I AL+AGA LSVSGLQMQT+FRNPLAGP VLGISSGASLGVA V+L G
Sbjct: 62 IVALLAGAALSVSGLQMQTLFRNPLAGPYVLGISSGASLGVALVVL------------AG 109
Query: 123 YIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEE 182
I + AA GA V+ +I V Q++K + +LI+G+M A++ + +Y S EE
Sbjct: 110 IGSSIGIAGAAWVGAAVVLLVITAVGQRIKDIMVILILGMMFSSGVGAVVQILQYLSKEE 169
Query: 183 DIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIK 242
++A+VIW +G+ V+ Q+ + + + L L+ L IK LNLLL G+ YA +GLNI+
Sbjct: 170 SLKAFVIWTMGALGDVTSGQLLILVPSVFAGLLLAVLTIKPLNLLLFGEEYAVTMGLNIR 229
Query: 243 RARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLAL 302
R+R + + +L +TA+CGP+ F+GLA+PH+ R L + SDH VL+P IL+GSS+ L
Sbjct: 230 RSRSLLFLSTTLLAGTITAFCGPIGFIGLAMPHVTRMLFQNSDHHVLLPGTILSGSSILL 289
Query: 303 LCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
LC++I+++ LP+N+ITAL+G PIVV+V+ +
Sbjct: 290 LCDIISKI----FTLPINAITALLGIPIVVWVVLRNK 322
>gi|29347361|ref|NP_810864.1| Fe3+ ABC transporter, permease protein [Bacteroides
thetaiotaomicron VPI-5482]
gi|29339261|gb|AAO77058.1| Fe3+ ABC transporter, permease protein [Bacteroides
thetaiotaomicron VPI-5482]
gi|156860181|gb|EDO53612.1| hypothetical protein BACUNI_02891 [Bacteroides uniformis ATCC 8492]
Length = 326
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 146/337 (43%), Positives = 216/337 (64%), Gaps = 18/337 (5%)
Query: 3 RYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQS 62
R T+L I I+++ V F L+L +G+V+IP+R VW + G + IV R+ ++
Sbjct: 4 RSTILFSILITLT-VGLFLLDLAVGAVNIPIRDVWAALTGGNCSRAT-EKIVLNIRLIKA 61
Query: 63 ITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLG 122
I AL+AGA LSVSGLQMQT+FRNPLAGP VLGISSGASLGVA V+L G
Sbjct: 62 IVALLAGAALSVSGLQMQTLFRNPLAGPYVLGISSGASLGVALVVL------------AG 109
Query: 123 YIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEE 182
I + AA GA V+ +I V Q++K + +LI+G+M A++ + +Y S EE
Sbjct: 110 IGSSIGIAGAAWVGAAVVLLVITAVGQRIKDIMVILILGMMFSSGVGAVVQILQYLSKEE 169
Query: 183 DIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIK 242
++A+VIW +G+ V+ Q+ + + + L L+ L IK LNLLL G+ YA +GLNI+
Sbjct: 170 SLKAFVIWTMGALGDVTSGQLLILVPSVFAGLLLAVLTIKPLNLLLFGEEYAVTMGLNIR 229
Query: 243 RARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLAL 302
R+R + + +L +TA+CGP+ F+GLA+PH+ R L + SDH VL+P IL+G+S+ L
Sbjct: 230 RSRSLLFLSTTLLAGTITAFCGPIGFIGLAMPHVTRMLFQNSDHHVLLPGTILSGASILL 289
Query: 303 LCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
LC++I+++ LP+N+ITAL+G PIVV+V+ +
Sbjct: 290 LCDIISKI----FTLPINAITALLGIPIVVWVVLRNK 322
>gi|34540448|ref|NP_904927.1| iron compound ABC transporter, permease protein [Porphyromonas
gingivalis W83]
gi|34396761|gb|AAQ65826.1| iron compound ABC transporter, permease protein [Porphyromonas
gingivalis W83]
Length = 344
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 127/324 (39%), Positives = 212/324 (65%), Gaps = 1/324 (0%)
Query: 20 FFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQM 79
F +L+ GS+ I V + +E ++ R+P+++TAL AGAG+S++GLQM
Sbjct: 19 FVTDLIWGSLDISPADVLQALTNGSEMQTTNDYVIRNFRLPKALTALFAGAGISIAGLQM 78
Query: 80 QTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALS 139
Q++FRNPLA S+LGI+SGA LGVA I+ I G++L G + AA G++
Sbjct: 79 QSLFRNPLADTSILGINSGAGLGVALYIMSFTIIPGLSLHS-GTADTWGVATAACIGSML 137
Query: 140 VMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVS 199
V+ LI V+ ++ V++LI+GVM+G++A++ I + ++FS E ++ Y+IW GS A +
Sbjct: 138 VLLLISAVAAWLRDMVSVLIVGVMVGFLASSFISILQFFSDNEMLKGYLIWSFGSVAGTT 197
Query: 200 GNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIV 259
Q++L I I+ L LS L+ K +N L +G+ YA+++G++++R R+ +I + I+T +
Sbjct: 198 WRQLSLMIPIVSGGLFLSMLMPKYMNALNIGENYARSVGIHVERERIILIGITSIITGTI 257
Query: 260 TAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPV 319
TA+ GP+ FLG+AVPH R L ++SD+R+L+P +L G+ L L+C++I ++PG LP+
Sbjct: 258 TAFTGPIAFLGIAVPHFSRILFKSSDYRILLPGTMLCGALLMLVCDMITQVPGKGFVLPI 317
Query: 320 NSITALIGAPIVVYVLFSKRKNEM 343
N+IT++IGAP+V+ + RK +
Sbjct: 318 NAITSMIGAPVVIMTIARNRKKRL 341
>gi|29347509|ref|NP_811012.1| Fe3+ ABC transporter, permease [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339409|gb|AAO77206.1| Fe3+ ABC transporter, permease [Bacteroides thetaiotaomicron
VPI-5482]
Length = 312
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 132/312 (42%), Positives = 200/312 (64%), Gaps = 8/312 (2%)
Query: 24 LVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVF 83
+ G +IP+ VW ++ G + + +NI+ R + + A + G LSVSGLQMQTVF
Sbjct: 1 MATGDTYIPIPKVWAVLTGGECDEMT-RNILLSIRFIRVVVAGLIGIALSVSGLQMQTVF 59
Query: 84 RNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTL 143
+NPLA P +LG+SSGA LGVA IL + +G L G + + G ++
Sbjct: 60 QNPLADPYLLGVSSGAGLGVALFILGAPLLGWADFPLLQSAGIVG---SGWIGTAVILLG 116
Query: 144 IVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQM 203
+ +S+KVK + +LI+GVMIGYVA AII + +Y S E ++ + +W +GS + ++ Q+
Sbjct: 117 VAIISRKVKNILGVLIMGVMIGYVAGAIIQILQYLSSAEQLKMFTLWSMGSLSHITAGQL 176
Query: 204 TLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYC 263
++ I ++ I L LS IK+LNLLLLG+ YA+ +G++IKR+R V + +LT VTA+C
Sbjct: 177 SIMIPVVCIGLLLSVACIKSLNLLLLGENYARTMGMSIKRSRTLVFISTALLTGTVTAFC 236
Query: 264 GPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSIT 323
GPV F+GLAVPH+ R L +DHR+LMP +LTG L+C++IA+ + LPVN IT
Sbjct: 237 GPVGFIGLAVPHITRLLFDNADHRILMPGTMLTGLIAMLICDIIAK----KFLLPVNCIT 292
Query: 324 ALIGAPIVVYVL 335
AL+G P++++V+
Sbjct: 293 ALLGVPVILWVI 304
>gi|68231781|ref|ZP_00570943.1| transport system permease protein [Frankia sp. EAN1pec]
gi|68200650|gb|EAN14860.1| transport system permease protein [Frankia sp. EAN1pec]
Length = 364
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 144/334 (43%), Positives = 211/334 (63%)
Query: 6 VLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITA 65
+LVL ++V + F L L +GSV +PL ++ G+ W +V + R+P+++TA
Sbjct: 24 LLVLAGLAVGVAVLFLLALAVGSVAVPLDETLRVLFGAEPRDPRWSVVVGQIRLPRALTA 83
Query: 66 LVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIG 125
+AGA L V+GLQMQT+FRNPLA P LG+SSGASLGVA V+ G GG +++ G
Sbjct: 84 ALAGAALGVAGLQMQTLFRNPLADPYSLGVSSGASLGVALVVAGIGGSGGTFTAQVAGSG 143
Query: 126 EIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIR 185
+ IA AGA V+ ++ ++ V+ VTLL+IGV++G ++++ + ++ E
Sbjct: 144 RFGVVIAGAAGAAIVLAAVLLLANWVRSVVTLLVIGVILGSAVSSVVNLLLTWTAPERAI 203
Query: 186 AYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRAR 245
Y W LGSFA S + +F + L ++ +K LN LLLG+ YA+ LGL ++R R
Sbjct: 204 QYWTWSLGSFAGTSTGDLAVFAPAVGAGLLVALASVKPLNALLLGENYARTLGLRLRRVR 263
Query: 246 LYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCN 305
+ + +L VTA+CGPV FLG+AVPH+ R LL T+DHRVL+PA +LTG+ LAL C+
Sbjct: 264 AVTLLGASLLAGAVTAFCGPVAFLGIAVPHVARRLLGTADHRVLVPATLLTGAGLALACS 323
Query: 306 LIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+ A++PG LP+N ITAL+GAPIV+ VL R
Sbjct: 324 IAAQLPGTGIVLPINVITALVGAPIVIAVLLRAR 357
>gi|126700619|ref|YP_001089516.1| putative iron ABC transporter, permease protein [Clostridium
difficile 630]
gi|115252056|emb|CAJ69892.1| putative iron ABC transporter, permease protein [Clostridium
difficile 630]
Length = 341
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 122/339 (35%), Positives = 214/339 (63%), Gaps = 7/339 (2%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVP 60
M+ + I + +S++ F + + GSV I + V ++V + ++ I++ R+P
Sbjct: 7 MRIRNTTIFIVLIISMILTFLVCVAFGSVKIEFKEVIDVVLRGMDNTEHYK-IIYNIRIP 65
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSK 120
+ + +V GA L+VSG+ +Q F+NP+ P +LG+SSG++L VA +IL ++G
Sbjct: 66 RVLATMVGGACLAVSGILLQIFFKNPIVEPYILGVSSGSTLSVALMILGGYTLG------ 119
Query: 121 LGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSV 180
+ +++ +AA GAL VM++++ + KVK TLLIIG+M GYV + I V + F+
Sbjct: 120 FESVNSMSIFVAAFIGALIVMSIVILFANKVKNITTLLIIGIMTGYVCSGITNVLQSFAN 179
Query: 181 EEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLN 240
+ ++ + +W +GSF+ + ++ + I + I+ L ++ +IK LN LLG+ YAK++G+N
Sbjct: 180 SDKLKEFTMWSMGSFSGFTWEKVEILIIVGILGLLMTVFIIKPLNAFLLGEEYAKSIGIN 239
Query: 241 IKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSL 300
I+ R+ ++ S IL AIV+A+ GP+ F+GLAVP + + + +TSD+RVL+P I GS +
Sbjct: 240 IRFFRVLIVFISSILAAIVSAFAGPIGFIGLAVPQISKMIFKTSDNRVLIPVVIFLGSIV 299
Query: 301 ALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
LC+LI+R+ LP+++IT+L+GAPIVV +L ++
Sbjct: 300 TALCDLISRVILSPVELPISTITSLLGAPIVVMLLVKRK 338
>gi|118579686|ref|YP_900936.1| transport system permease protein [Pelobacter propionicus DSM 2379]
gi|118502396|gb|ABK98878.1| transport system permease protein [Pelobacter propionicus DSM 2379]
Length = 348
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 117/287 (40%), Positives = 191/287 (66%), Gaps = 6/287 (2%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
I+W R+P+++ A++ GA L++SGL +Q FRNP+ GP +LGISSGA++ V+ V+L + +
Sbjct: 65 IIWDIRIPRALGAVMGGAFLAISGLLLQVYFRNPIVGPYILGISSGATVMVSLVMLTTLT 124
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAII 172
+G L+ T+A+ GA +VM+LI+ ++ +VK +TLLI+G+M+GY+ A+
Sbjct: 125 VGFTVLNPY------MCTLASILGAYAVMSLILVIASRVKSGITLLIVGLMMGYLCGAVT 178
Query: 173 GVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDG 232
V + +E I+ +++W LGSF+ +++++ + LL L F L K LN LLG+
Sbjct: 179 AVLTALAEKEKIKGFILWELGSFSGFKWSEISMLALMGGALLVLVFALSKPLNAFLLGEE 238
Query: 233 YAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPA 292
YA ++G+NI+R R+ ++ + L +VTA GP+ F+G+AVPH+ R TSD+R+L+P
Sbjct: 239 YAASMGVNIRRFRVLILMSACALAGMVTALAGPIAFVGMAVPHMARLFFGTSDNRILIPG 298
Query: 293 AILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
A L G+++A LC+LIARM LP++SITA GAPIV+ +L ++
Sbjct: 299 ASLVGAAVASLCDLIARMVMSPVELPLSSITAFFGAPIVLTLLIRRK 345
>gi|15895707|ref|NP_349056.1| Hemin permease [Clostridium acetobutylicum ATCC 824]
gi|15025459|gb|AAK80396.1|AE007744_6 Hemin permease [Clostridium acetobutylicum ATCC 824]
Length = 342
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 127/319 (39%), Positives = 199/319 (62%), Gaps = 6/319 (1%)
Query: 20 FFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQM 79
F ++ GS+ I V+NI+ + IVW R P++I AL+ G+ LSVSGL +
Sbjct: 26 FIFSISTGSLKINFGEVFNILFKIGDFNDGDYQIVWNIRFPRAIGALIGGSALSVSGLLL 85
Query: 80 QTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALS 139
Q +F+NP+ P VLGISSGA+L VA V+L S G A S + +AA G+
Sbjct: 86 QVLFKNPIVEPYVLGISSGATLFVALVMLGGISFGFAASSPF------LVFLAALIGSTL 139
Query: 140 VMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVS 199
+M L++ + KVK VTLLIIG+M+GY+ +A+ V F+ ++ ++ + +W LGSF+ +
Sbjct: 140 IMFLVILFANKVKSVVTLLIIGIMVGYICSAVTNVLSAFADKQQLQFFTMWTLGSFSGFT 199
Query: 200 GNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIV 259
+ + +I I L +FL++K LN +LG+ YAK+LG+ IK R+ VI S +LTA+V
Sbjct: 200 WKNIYILFFIGIPSLLAAFLIVKPLNAFILGEQYAKSLGIKIKFFRIIVIIISSLLTAVV 259
Query: 260 TAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPV 319
TA+ GP+ F+GLAVPH+ R + +TS+ L+P IL G + +C++I+R LP+
Sbjct: 260 TAFAGPIAFIGLAVPHISRLIFKTSNTIFLIPGTILLGGIITSICDVISRTVFSPTELPI 319
Query: 320 NSITALIGAPIVVYVLFSK 338
+++TA IGAPIV++++ +
Sbjct: 320 SAVTAFIGAPIVIFLILKR 338
>gi|153810498|ref|ZP_01963166.1| hypothetical protein RUMOBE_00879 [Ruminococcus obeum ATCC 29174]
gi|149833677|gb|EDM88758.1| hypothetical protein RUMOBE_00879 [Ruminococcus obeum ATCC 29174]
Length = 344
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 126/334 (37%), Positives = 203/334 (60%), Gaps = 8/334 (2%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITAL 66
L I + V ++ F F N+ GS+ I L+ ++ I+ + + NIVW+ R+P+ + A+
Sbjct: 17 LSFIILIVLLLVFIFWNINSGSISISLKDIFQILFHKNGDETAY-NIVWEIRLPRILAAV 75
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGE 126
+ G LSVSG +QT F NP+AGP VLGISSGA L VA ++ VA S L
Sbjct: 76 ILGGALSVSGFLLQTFFGNPIAGPFVLGISSGAKLIVALTMIYLLGKSMVATSGL----- 130
Query: 127 IALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRA 186
+ +AA G+L M ++ +S+KVK L++ G+MIGY+ +AI F+ + +I
Sbjct: 131 --MILAAFTGSLISMGFVLLISRKVKQMSMLVVSGIMIGYICSAITDFVVTFADDSNIVN 188
Query: 187 YVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARL 246
W LGSF+ S + +++ ++ L L+FL+ K ++ LG+GYA+N+G+NIK R+
Sbjct: 189 LHNWSLGSFSGTSWDNVSVMAVVVFAALFLTFLMSKPISAYQLGEGYAQNMGVNIKAFRI 248
Query: 247 YVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNL 306
+I S IL+A VTA+ GP+ F+G+AVPHL + L++TS +++P L G+ L C+L
Sbjct: 249 ALILLSSILSACVTAFAGPISFVGIAVPHLIKSLMKTSKPLLVIPGCFLGGAVFCLFCDL 308
Query: 307 IARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
IAR L ++S+TA+ GAP+V+Y++ +++
Sbjct: 309 IARTAFAPTELSISSVTAVFGAPVVIYIMIRRKR 342
>gi|156107102|gb|EDO08847.1| hypothetical protein BACOVA_04703 [Bacteroides ovatus ATCC 8483]
Length = 326
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 135/314 (42%), Positives = 202/314 (64%), Gaps = 17/314 (5%)
Query: 26 LGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRN 85
+G+V +PL VW + G + P I+ R+ +++ AL+AGA LSVSGLQMQT+FRN
Sbjct: 26 VGAVAVPLGDVWAALTG-GDCPRATAKIILNIRLIKAVVALLAGAALSVSGLQMQTLFRN 84
Query: 86 PLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
PLAGP VLGISSGASLGVA V+L G I + AA GA V+ +I
Sbjct: 85 PLAGPYVLGISSGASLGVALVVLA------------GVGSSIGIAGAAWLGAAIVLVVIA 132
Query: 146 FVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTL 205
V ++K + +LI+G+M A++ + +Y + +E ++ +VIW +GS V+ NQ+ +
Sbjct: 133 AVGHRIKDIMVILILGMMFSSGIGAVVQILQYVANDESLKMFVIWTMGSLGDVTFNQLAV 192
Query: 206 FIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGP 265
I +I L L+ + IK LNLLL G+ YA +GLN++R+R + + +L VTA+CGP
Sbjct: 193 LIPSIIAGLLLAVITIKPLNLLLFGEEYAVTMGLNVRRSRGLLFLSTTLLAGTVTAFCGP 252
Query: 266 VIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITAL 325
+ F+GLA+PH+ R L R SDHRVL+P +L+G+S+ LLC+L++++ LP+N+ITAL
Sbjct: 253 IGFIGLAMPHVTRMLFRNSDHRVLVPGTVLSGASVLLLCDLVSKL----FTLPINAITAL 308
Query: 326 IGAPIVVYVLFSKR 339
+G PIVV+V+ +
Sbjct: 309 LGIPIVVWVVLRNK 322
>gi|28211050|ref|NP_781994.1| iron(III) dicitrate transport system permease protein fecD
[Clostridium tetani E88]
gi|28203489|gb|AAO35931.1| iron(III) dicitrate transport system permease protein fecD
[Clostridium tetani E88]
Length = 342
Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats.
Identities = 127/316 (40%), Positives = 199/316 (62%), Gaps = 10/316 (3%)
Query: 26 LGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRN 85
GSV I L+ V I+ ++I+ R+P++I LV GA L++SGL +Q F+N
Sbjct: 32 FGSVRIDLKEVIQIIFNKELSNSTNKDIIMDIRLPRAIATLVGGAALALSGLLLQIFFKN 91
Query: 86 PLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGY--IGEIALTIAATAGALSVMTL 143
P+ P +LGISSGA+L VA V+L GG +LG+ L A G+L VM L
Sbjct: 92 PIVEPYILGISSGATLFVALVML-----GGF---RLGFENPSPYVLVFGAFLGSLLVMML 143
Query: 144 IVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQM 203
+V + +VK +TLLIIG+M+GY+ +A+ + F+ +E + +++W GSF+ + N +
Sbjct: 144 VVVFAMRVKNIITLLIIGIMVGYICSAVTNILTAFADKEQLYGFIMWTKGSFSGFTWNNV 203
Query: 204 TLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYC 263
+ + I +L SF +K LN L+G+ YAK++G+NIK+ RL +I + ILTA+VTA+
Sbjct: 204 GVLTSVGIPILIASFFTVKPLNAFLMGEEYAKSMGVNIKKFRLIIILIASILTAVVTAFT 263
Query: 264 GPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSIT 323
GP+ F+GLAVPH+ R + +TSD+RVL+P ++ G+ + C+LI R LP+++IT
Sbjct: 264 GPIAFIGLAVPHISRLIFKTSDNRVLIPGTVILGAIVTAFCDLICRTLFAPIELPISAIT 323
Query: 324 ALIGAPIVVYVLFSKR 339
+ IGAPIV+Y++ +R
Sbjct: 324 SFIGAPIVIYLILKRR 339
>gi|42526260|ref|NP_971358.1| iron compound ABC transporter, permease protein, putative
[Treponema denticola ATCC 35405]
gi|41816372|gb|AAS11239.1| iron compound ABC transporter, permease protein, putative
[Treponema denticola ATCC 35405]
Length = 343
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 126/339 (37%), Positives = 205/339 (60%), Gaps = 6/339 (1%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
K+ ++V IF+S+ +F +N+V GSV L+ + +I G + N+++K R P+
Sbjct: 6 KKRIIIVFIFLSILFIFAVLINIVSGSVSFSLKDILDICIGERTPSTLEYNVLFKIRFPR 65
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
+ A++ G LS+SG +QT FRNP+AGP VLGISSGA L V +IL + + +AL+ L
Sbjct: 66 ILAAILFGIALSISGFLLQTFFRNPIAGPYVLGISSGARLFVGFIILTNFTFN-IALNSL 124
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVE 181
+ +A+ G+L M L++ +++V+ L+++G+MIGY+A+A F+ +
Sbjct: 125 -----FLVFLASAIGSLLSMLLVLVFAKRVRDISILIVVGIMIGYIASAGTNFMIAFASD 179
Query: 182 EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNI 241
I +W +GSF+ ++ + + I+I + F L K L LLG+ YAK++G+NI
Sbjct: 180 YKIAGLTMWSMGSFSGITWKMIRISSIIIIPSVIGVFCLSKPLQAYLLGENYAKSMGVNI 239
Query: 242 KRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLA 301
K RL +I S IL+A VT + GP+ F+G+AVPHL R + TS ++L+PA L G+S
Sbjct: 240 KNFRLVLIFLSSILSACVTGFAGPISFVGIAVPHLTRLTVSTSQPKILIPAVTLMGASFC 299
Query: 302 LLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
LL + AR L +++IT++IGAPIV++++ K K
Sbjct: 300 LLSDYFARTLFAPTELSLSTITSMIGAPIVIWLMVGKNK 338
>gi|106895384|ref|ZP_01362480.1| transport system permease protein [Clostridium sp. OhILAs]
gi|106773304|gb|EAT29892.1| transport system permease protein [Clostridium sp. OhILAs]
Length = 338
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 117/318 (36%), Positives = 196/318 (61%), Gaps = 6/318 (1%)
Query: 23 NLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTV 82
N+ GSV + L+S+ +++ G+ E + NI++K R+P+ I+A++ G LS+SG +QT
Sbjct: 25 NIRKGSVDLNLKSLMDVILGNRELSQLESNILFKIRLPRIISAILFGGALSISGFLLQTF 84
Query: 83 FRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMT 142
F+NP+ GP VLG+SSGA L V IL + SI + G + + A G++ VM+
Sbjct: 85 FKNPIVGPFVLGVSSGAKLFVGLFILTTISIPSLI------SGPFEMFLIAFVGSMLVMS 138
Query: 143 LIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQ 202
L++ ++ + L+++G+MIGYVA+A F+ E+ I W +G+F+ V+ +
Sbjct: 139 LVLLFAKSAESISVLIVVGIMIGYVASAGTDFMMTFASEQKIATLTTWSMGTFSGVTWDM 198
Query: 203 MTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAY 262
+ + I+I F L K L LLG+ YAK++G+NIK R+ +I+ S IL+A VTA+
Sbjct: 199 IKVSAIIIIPTTLSVFFLSKPLQGYLLGENYAKSMGINIKAFRIILITLSSILSACVTAF 258
Query: 263 CGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSI 322
GPV F+G+AVPHL R +TS+ ++L PA L G+S L+ + AR L ++++
Sbjct: 259 AGPVSFVGIAVPHLTRLTCKTSNPKILTPAIFLLGASFTLIADYFARTLFSPVELNISTV 318
Query: 323 TALIGAPIVVYVLFSKRK 340
T+ IGAP++++++ ++RK
Sbjct: 319 TSFIGAPLIIWLMLNRRK 336
>gi|139436918|ref|ZP_01771078.1| Hypothetical protein COLAER_00049 [Collinsella aerofaciens ATCC
25986]
gi|133776565|gb|EBA40385.1| Hypothetical protein COLAER_00049 [Collinsella aerofaciens ATCC
25986]
Length = 340
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 105/328 (32%), Positives = 189/328 (57%), Gaps = 8/328 (2%)
Query: 12 ISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAG 71
++V ++ NL +GSV +P + I+ G A + Q ++W+ R+P+ ++A++ G
Sbjct: 19 LAVVLIVLVGANLCIGSVLVPADHIPGILSGGAANSMESQ-VIWEIRLPRVLSAVLLGGA 77
Query: 72 LSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTI 131
LS+SG +QT F NP+A P +LG+SSGA VA ++ V L + A+
Sbjct: 78 LSLSGFLLQTFFNNPIADPFILGVSSGAKFVVALTMI-------VLLGANQAMSSPAMVA 130
Query: 132 AATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWG 191
AA G+L ++ ++ +++++ L++ GVM+GY+ +A F+ ++ I W
Sbjct: 131 AAFLGSLITISFVLLIARRISSMAMLIVAGVMVGYICSAATNFLIAFADDQSIVNLHNWS 190
Query: 192 LGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISC 251
LGSF+ S + + + ++I + F + K L+ LG+ YAK++G+N+ R R+ ++
Sbjct: 191 LGSFSGSSWDDVAVIAVVVITVSACVFAISKPLSAFQLGEAYAKSVGVNVARFRVVLVLL 250
Query: 252 SGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMP 311
+ +L+A VTA+ GPV F+G+AVPHL + L++S ++PA L G+ C+LIAR
Sbjct: 251 ASMLSACVTAFAGPVSFVGIAVPHLVKSALKSSKPIRVIPACFLGGAIFCAGCDLIARTL 310
Query: 312 GFEGALPVNSITALIGAPIVVYVLFSKR 339
L ++++TA+ GAP+V+ ++ KR
Sbjct: 311 FSPVELSISAVTAIFGAPVVIALMLKKR 338
>gi|153853697|ref|ZP_01995053.1| hypothetical protein DORLON_01044 [Dorea longicatena DSM 13814]
gi|149753447|gb|EDM63378.1| hypothetical protein DORLON_01044 [Dorea longicatena DSM 13814]
Length = 272
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 100/276 (36%), Positives = 167/276 (60%), Gaps = 7/276 (2%)
Query: 65 ALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYI 124
A + G LS+SG +QT F NP+AGP VLGISSGA + VA ++ L + ++
Sbjct: 2 AAILGGALSLSGFLLQTFFSNPIAGPFVLGISSGAKMMVALAMIF-------FLERYAFV 54
Query: 125 GEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDI 184
L +AA GAL I+ +S+K+K TLL+ G+MIGY+ +AI F+ + DI
Sbjct: 55 SSYTLIVAAFIGALISTGFILLLSRKMKHMATLLVGGIMIGYICSAITDFVVTFAEDSDI 114
Query: 185 RAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRA 244
W GSF+ ++ + + + + ++ + L+F L K + LG+ YA+++G+NI+
Sbjct: 115 VNLHGWSQGSFSGMNWSNVQVAVIVIGVTTVLTFFLSKPIGAYQLGEAYAQSMGVNIRFF 174
Query: 245 RLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLC 304
R+ +I S IL+A VTA+ GP+ F+G+AVP+L + LRTS V++P + G+ ++C
Sbjct: 175 RVALILLSSILSASVTAFAGPISFVGIAVPYLVKHALRTSKPLVVIPGTFVGGAVFCMIC 234
Query: 305 NLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+LIARM L ++++T++ GAP+V++++ +K
Sbjct: 235 DLIARMAFAPMELNISTVTSIFGAPVVIFMMVRGQK 270
>gi|145953444|ref|ZP_01802452.1| hypothetical protein CdifQ_04003434 [Clostridium difficile
QCD-32g58]
Length = 281
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 95/278 (34%), Positives = 171/278 (61%), Gaps = 7/278 (2%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVP 60
M+ + I + +S++ F + + GSV I + V ++V + ++ I++ R+P
Sbjct: 7 MRIRNTTIFIVLIISMILTFLVCVAFGSVKIEFKEVIDVVLRGMDNTEHYK-IIYNIRIP 65
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSK 120
+ + +V GA L+VSG+ +Q F+NP+ P +LG+SSG++L VA +IL ++G
Sbjct: 66 RVLATMVGGACLAVSGILLQIFFKNPIVEPYILGVSSGSTLSVALMILGGYTLG------ 119
Query: 121 LGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSV 180
+ +++ +AA GAL VM++++ + KVK TLLIIG+M GYV + I V + F+
Sbjct: 120 FESVNSMSIFVAAFIGALIVMSIVILFANKVKNITTLLIIGIMTGYVCSGITNVLQSFAN 179
Query: 181 EEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLN 240
+ ++ + +W +GSF+ + ++ + I + I+ L ++ +IK LN LLG+ YAK++G+N
Sbjct: 180 SDKLKEFTMWSMGSFSGFTWEKVEILIIVGILGLLMTVFIIKPLNAFLLGEEYAKSIGIN 239
Query: 241 IKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCR 278
I+ R+ ++ S IL AIV+A+ GP+ F+GLAVP + +
Sbjct: 240 IRFFRVLIVFISSILAAIVSAFAGPIGFIGLAVPQISK 277
>gi|91773082|ref|YP_565774.1| ABC Fe3+-siderophore transporter, inner membrane subunit
[Methanococcoides burtonii DSM 6242]
gi|91712097|gb|ABE52024.1| ABC Fe3+-siderophore transporter, inner membrane subunit
[Methanococcoides burtonii DSM 6242]
Length = 373
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 109/351 (31%), Positives = 186/351 (52%), Gaps = 21/351 (5%)
Query: 2 KRYTVLVLIFISVSIVFFFFLN---LVLGSVHIPLRSVWNIVCGS------AEEPVVWQN 52
+RY L F+ +V FL+ + +G + I + V+ I+ S E + Q
Sbjct: 32 QRYVGKKLFFLISMLVLVIFLSAFIVTIGPLEISVAEVYKILLSSLFPGYFTNEGLTSQ- 90
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVA-SVILLSG 111
IVW R+P+ I ++AG GL V G MQ V +NPLA P LGISSGA+ GVA + ++ G
Sbjct: 91 IVWNIRLPRIIAGIMAGFGLGVCGCVMQAVLKNPLASPFTLGISSGANFGVAVAAVMGVG 150
Query: 112 SIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAI 171
IGG L +G A L + +I + K S TL++ G+ I Y+ +++
Sbjct: 151 VIGGPYL----LVGN-----AFLFSMLCALFIIALANFKGATSETLILAGIAINYLFSSL 201
Query: 172 IGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGD 231
+F+YF+ +E +R V WG+G + S + ++ + + + PL +L LN++ +GD
Sbjct: 202 SDLFRYFATDEQLRIMVSWGMGDLSAFSWSNFSILLGVFVFCTPLLYLKANDLNIMAIGD 261
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
AK+LG++ R R++ + + +L A V + G + F+GL PH+ R ++ SDH+ L P
Sbjct: 262 ENAKSLGIDTNRVRMFTMLLASLLIATVVCFTGTIAFIGLVAPHMAR-MVVGSDHKYLFP 320
Query: 292 AAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKNE 342
A+ + G+ + + + +P +T+L+G P +Y++ K+K E
Sbjct: 321 ASGILGALILISADATGLNILRPTMIPTGIMTSLLGVPFFMYLILKKKKKE 371
>gi|77361989|ref|YP_341563.1| Hemin ABC-transport system permease [Pseudoalteromonas haloplanktis
TAC125]
gi|76876900|emb|CAI89117.1| Hemin ABC-transport system permease [Pseudoalteromonas haloplanktis
TAC125]
Length = 351
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 112/325 (34%), Positives = 174/325 (53%), Gaps = 7/325 (2%)
Query: 14 VSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLS 73
++ VF FF+ L G V++ L + I+ E + I+W+ R+P+ + A+V GAGL+
Sbjct: 24 LACVFMFFIALSKGGVNLSLSEIVAII-NQLETDSLKNAIIWQIRLPRIVLAMVVGAGLA 82
Query: 74 VSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAA 133
G MQ +FRNPLA P ++G+SSGA+LG + I+L S+ S LG A+ + A
Sbjct: 83 ACGCAMQAIFRNPLADPGLIGVSSGAALGAVATIVLGSSLFANFSSTLGVY---AVPVGA 139
Query: 134 TAGALSVMTLIVFVSQKVK--GSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWG 191
G +SV I +S ++LL+ G+ + + ++IG S E+ +R W
Sbjct: 140 FIGCISVCVFIYRLSAHSGQFTIISLLLAGIAVNAIVGSLIGGLTLISNEQQLRDLTFWS 199
Query: 192 LGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISC 251
+GS A M + I+++ + L L K LNL LLG+ AK+LG+N+ R + V C
Sbjct: 200 MGSLAGNHFAMMLPSLCIIVLSVVLLLRLAKPLNLYLLGEAQAKHLGINVTRLKKQVFIC 259
Query: 252 SGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMP 311
+ + T + G + F+G VPH+ R L+ DHR LMPA+IL G+ L +L AR
Sbjct: 260 TALCTGAAVSITGIIGFVGFIVPHIVR-LVLGPDHRYLMPASILGGALLLSFADLFARTV 318
Query: 312 GFEGALPVNSITALIGAPIVVYVLF 336
LP+ IT+ IG P + +L
Sbjct: 319 MLPAELPIGLITSAIGGPFFLIMLL 343
>gi|150400552|ref|YP_001324318.1| transport system permease protein [Methanococcus aeolicus Nankai-3]
gi|150013255|gb|ABR55706.1| transport system permease protein [Methanococcus aeolicus Nankai-3]
Length = 349
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 119/353 (33%), Positives = 201/353 (56%), Gaps = 24/353 (6%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
KR++VL+ + ++ I + ++ LG+V I + N + + I+ R+P+
Sbjct: 4 KRFSVLIGVLTTLLIATSIY-SMALGTVDIKNSEIINYLYDGTTGNTIKDKIITNLRMPR 62
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
++ A+VAG G++++G+ MQ FRNPLA P ++GI+SGASLGV I S L K
Sbjct: 63 TLGAVVAGVGIALAGILMQGYFRNPLADPYLMGIASGASLGVVLYIFTS------VLVKH 116
Query: 122 GYIGEI-ALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVAN----AIIGVFK 176
G+ I ++A G+ M +++ +++ VK + TLLI G+MIG +A+ AII + +
Sbjct: 117 GFPHSIYGFILSAYLGSFITMFVVINIARIVKQTSTLLICGLMIGAIASGLTTAIIYLGE 176
Query: 177 YFSVEED-IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFL----LIKTLNLLLLGD 231
Y EED + +++WG+GS ++ Q+ L + I+++P+S + L K L+ LLG+
Sbjct: 177 YIGEEEDQLSGFLLWGMGSVNNLTWEQIIL---MAIVVIPVSIICYVFLSKKLDANLLGE 233
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
YA ++G+NIK R ++I S ILTA + A+ GP+ F+GL P + R + +TS H +MP
Sbjct: 234 NYAISVGVNIKNLRTWLIILSCILTATIVAFTGPIAFVGLTCPIIARMICKTSKHLYVMP 293
Query: 292 AAILTGSSLALLCNLIAR----MPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
L G ++ ++I R +P LP+ +LIGAPI + + +K
Sbjct: 294 ITALLGGIFLIVADIITRPGVIIPTTSNNLPLLCPLSLIGAPIAIVIYLKIKK 346
>gi|90409211|ref|ZP_01217322.1| heme/hemin ABC transporter, permease protein [Psychromonas sp.
CNPT3]
gi|90309684|gb|EAS37858.1| heme/hemin ABC transporter, permease protein [Psychromonas sp.
CNPT3]
Length = 355
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 110/341 (32%), Positives = 184/341 (53%), Gaps = 25/341 (7%)
Query: 6 VLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITA 65
++ L+FISV ++ G + PL +V +++ A ++ + I+W R+P ++TA
Sbjct: 31 IMALLFISV------LFDISTGPGNFPLSTVLDVLWDKASHGIILEVIIWDHRMPVALTA 84
Query: 66 LVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIG 125
L+ GA L ++G MQT+ NPLA P LGISS AS G A I+ GV L+ IG
Sbjct: 85 LIVGAMLGMAGALMQTILNNPLAEPFTLGISSAASFGAALAIVF-----GVGLTP--NIG 137
Query: 126 EIALTIAA------TAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFS 179
+ +T+ A T GAL MT + K G+ T+++ G+ I + NA++ + +Y +
Sbjct: 138 SLLVTVNAFIFALCTCGALLAMTRV-----KGVGTQTIVLFGIAIFFAFNAMLAMMEYSA 192
Query: 180 VEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGL 239
E ++ + W LGS R S Q+ + +M+I+LP L L LGD A ++G+
Sbjct: 193 SETQLQRIIFWMLGSLGRASWQQLGMGSLMMLIILPFCMSRTWRLTALRLGDESAMSMGV 252
Query: 240 NIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSS 299
++KR R+ ++ C +L A A+ G + F+GL PH+ R +L D R +P + + G++
Sbjct: 253 DVKRLRIEMLICISLLAATSVAFVGIIGFVGLVGPHIAR-MLVGEDQRYFLPLSAMLGAT 311
Query: 300 LALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+ L +++++ PV ITALIG PI + ++ K
Sbjct: 312 MLSLTSIVSKSITPGIIYPVGIITALIGVPIFLIIIMRHSK 352
>gi|126652593|ref|ZP_01724757.1| YvrB [Bacillus sp. B14905]
gi|126590584|gb|EAZ84701.1| YvrB [Bacillus sp. B14905]
Length = 333
Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 108/330 (32%), Positives = 182/330 (55%), Gaps = 18/330 (5%)
Query: 16 IVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVS 75
++ + + +GSVHIP+ +WN S +E NI WK R+P+ + A + GA L+++
Sbjct: 15 LIISIWCGVAIGSVHIPIEVLWN---QSVDETAA--NIFWKIRLPRVLLAGLVGASLAIA 69
Query: 76 GLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATA 135
G Q + +NPLA P LGISSGAS+G I + SI V L AL +
Sbjct: 70 GAAFQGLLKNPLADPYTLGISSGASVGAVMTIFFNISIPVVGL--------YALPTFSMI 121
Query: 136 GALSVMTLIVFVSQKVKGSV---TLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGL 192
GA+ M +++ ++ V S+ TL++ GV+ ++I + S EE +R + W L
Sbjct: 122 GAIITMVIVMSFARVVDRSLKMETLILTGVIFSSFLGSLISLMIALSGEE-LRQVIGWLL 180
Query: 193 GSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCS 252
GS + + + I +I+ + + + LN+LL G+ AK+LG+N+K+++ ++
Sbjct: 181 GSVSMRGWPYVQMIIPFVIVGSLMLWTQRRELNVLLYGEERAKHLGVNVKKSKYLILVGG 240
Query: 253 GILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPG 312
+LT A G + F+GL VPH+ R ++ SDHR L+P + G++L ++C+L+AR
Sbjct: 241 SMLTGAAVAVSGTIGFVGLVVPHMTR-MIWGSDHRHLLPLSFFNGATLLIICDLVARTII 299
Query: 313 FEGALPVNSITALIGAPIVVYVLFSKRKNE 342
LP+ ITA IGAP+ Y+ + +R+ +
Sbjct: 300 LPRELPIGVITAFIGAPVFSYIFYKQRRGK 329
>gi|16120619|ref|NP_403932.1| hemin transport system permease protein HmuU [Yersinia pestis CO92]
gi|22124454|ref|NP_667877.1| ABC-type permease [Yersinia pestis KIM]
gi|45440290|ref|NP_991829.1| hemin transport system permease protein HmuU [Yersinia pestis
biovar Microtus str. 91001]
gi|51594692|ref|YP_068883.1| ABC hemin transporter, permease subunit HmuU [Yersinia
pseudotuberculosis IP 32953]
gi|77633613|ref|ZP_00795736.1| COG0609: ABC-type Fe3+-siderophore transport system, permease
component [Yersinia pestis Angola]
gi|89103653|ref|ZP_01176222.1| COG0609: ABC-type Fe3+-siderophore transport system, permease
component [Yersinia pestis biovar Orientalis str. IP275]
gi|108809992|ref|YP_653908.1| hemin transport system permease protein HmuU [Yersinia pestis
Antiqua]
gi|108813547|ref|YP_649314.1| hemin transport system permease protein HmuU [Yersinia pestis
Nepal516]
gi|145600937|ref|YP_001165013.1| hemin transport system permease protein HmuU [Yersinia pestis
Pestoides F]
gi|150260671|ref|ZP_01917399.1| hemin transport system permease protein HmuU [Yersinia pestis
CA88-4125]
gi|153950734|ref|YP_001402758.1| hemin ABC transporter, permease protein HmuU [Yersinia
pseudotuberculosis IP 31758]
gi|6226636|sp|Q56992|HMUU_YERPE Hemin transport system permease protein hmuU
gi|21957242|gb|AAM84128.1|AE013655_5 ABC-type permease [Yersinia pestis KIM]
gi|3776555|gb|AAC64869.1| ABC-type permease [Yersinia pestis]
gi|45435146|gb|AAS60706.1| hemin transport system permease protein HmuU [Yersinia pestis
biovar Microtus str. 91001]
gi|51587974|emb|CAH19577.1| ABC hemin transporter, permease subunit HmuU [Yersinia
pseudotuberculosis IP 32953]
gi|108777195|gb|ABG19714.1| hemin transport system permease protein HmuU [Yersinia pestis
Nepal516]
gi|108781905|gb|ABG15963.1| hemin transport system permease protein HmuU [Yersinia pestis
Antiqua]
gi|115346098|emb|CAL18966.1| hemin transport system permease protein HmuU [Yersinia pestis CO92]
gi|145212633|gb|ABP42040.1| hemin transport system permease protein HmuU [Yersinia pestis
Pestoides F]
gi|149290079|gb|EDM40156.1| hemin transport system permease protein HmuU [Yersinia pestis
CA88-4125]
gi|152962229|gb|ABS49690.1| hemin ABC transporter, permease protein HmuU [Yersinia
pseudotuberculosis IP 31758]
Length = 334
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 104/316 (32%), Positives = 178/316 (56%), Gaps = 14/316 (4%)
Query: 26 LGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRN 85
+G++ + R++WN A + W NI R+P+ + A+V G L+VSG MQ +FRN
Sbjct: 28 MGALSLSFRTLWNTSTNDAMWHI-WLNI----RLPRVLLAVVVGCALAVSGTIMQGLFRN 82
Query: 86 PLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
PLA P +LGISSGA+L V +I++ S+ + + + + A G+L++ T+I
Sbjct: 83 PLADPGLLGISSGAALCVGLIIVMPFSLPPL-------LALYSHMVGAFIGSLAISTIIF 135
Query: 146 FVSQKVKGSVT-LLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMT 204
+S+ G++ LL+ G+ I + A +GV Y S ++ +R + +W +GS + + +
Sbjct: 136 TLSRWGHGNLARLLLAGIAINALCGAAVGVLTYISDDQQLRQFSLWSMGSLGQAQWSTLL 195
Query: 205 LFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCG 264
+ +++ L L + LNLL LGD A LG+N+++A+L ++ S IL A G
Sbjct: 196 VASSLILPTCILGLLQARQLNLLQLGDEEAHYLGVNVRQAKLRLLLLSAILIGAAVAVSG 255
Query: 265 PVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITA 324
+ F+GL VPHL R + +DHR L+P A L G+ L L + +AR +PV +T+
Sbjct: 256 VIGFIGLVVPHLIR-MRIGADHRWLLPGAALGGACLLLTADTLARTLVAPAEMPVGLLTS 314
Query: 325 LIGAPIVVYVLFSKRK 340
L+G P ++++ +R+
Sbjct: 315 LLGGPYFLWLILRQRE 330
>gi|152970718|ref|YP_001335827.1| vtamin B12-transporter permease [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150955567|gb|ABR77597.1| vtamin B12-transporter permease [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 331
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 98/289 (33%), Positives = 165/289 (57%), Gaps = 12/289 (4%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLS 110
Q +W+ R+P+++ L+ GA L++SG MQ +F NPLA P +LGIS+GA +G+ + +LL
Sbjct: 52 QLFIWQIRLPRTLAVLLVGAALALSGAIMQALFENPLAEPGLLGISNGAGVGLIAAVLLG 111
Query: 111 GSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANA 170
G + AL + A GAL + +++ +++ + LL+ GV +G + +A
Sbjct: 112 K----------GVLPGWALGLCAIFGALLITFILLRFARRHLSTSRLLLAGVALGIICSA 161
Query: 171 IIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLG 230
++ YFS D+R + W +G F V Q+ L I ++ +L + L + LNLL LG
Sbjct: 162 LMTWAVYFSTSFDLRQLMYWMMGGFGGVDWQQLWLMIALLPVLCWVC-LQSQPLNLLALG 220
Query: 231 DGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLM 290
+ A+ LGL + R ++ +G + + A G + F+GL +PH+ R L SDHRVL+
Sbjct: 221 EVSARQLGLPLWLWRKLLVVATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLSDHRVLL 279
Query: 291 PAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
PA ++ G+S L ++IAR+ LP+ +TA +GAP+ +++L R
Sbjct: 280 PACMMAGASALLGADIIARLALSAAELPIGVVTATLGAPVFIWLLLRSR 328
>gi|89211194|ref|ZP_01189569.1| transport system permease protein [Halothermothrix orenii H 168]
gi|89159226|gb|EAR78899.1| transport system permease protein [Halothermothrix orenii H 168]
Length = 337
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 109/338 (32%), Positives = 187/338 (55%), Gaps = 14/338 (4%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITAL 66
++ + + V ++ F L+L +GSVHIP+ +W I+ A+ ++ I+ R+P+ I +
Sbjct: 9 IIFLALIVLLIVVFILSLAVGSVHIPIHQIWAIILDHADSNETYKIIIKDIRLPRIILSF 68
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGE 126
+ G+ L+VSG+ Q V RNP+ P ++G+S+GA V IL + SI ++
Sbjct: 69 LVGSALAVSGVVFQGVIRNPMVDPYIIGVSAGAGTAVTLAILFNWSI--------TFLWF 120
Query: 127 IALTIAATAGALSVMTLIVFVSQKVKGS--VTLLIIGVMIGYVANAIIGVFKYFSVEEDI 184
+ I A G+L + + +++ K + T L+ GV +G++ NA++ F V D+
Sbjct: 121 DTMPIMAFLGSLLTIFTVYRMARVNKKTPVTTFLLAGVAVGFLLNAVMSFLMVF-VTGDL 179
Query: 185 RAYVIWGLGSFARVSGNQMTLFI-YIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKR 243
V W +GS ++ + + Y ++ L+P+ F L K LN+LLLG+ A NLG+N++R
Sbjct: 180 YKVVYWLMGSLITEGWKEVKIIVPYYILGLIPVVFYL-KDLNILLLGEESAHNLGVNVER 238
Query: 244 ARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALL 303
+ +I +LTA + G + F+GL VPH+ R L+ DHR L+P + L G ++
Sbjct: 239 VKSILIFSGALLTAAAVSVSGIIGFIGLIVPHISR-LIIGPDHRRLLPFSWLLGGLFLVV 297
Query: 304 CNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKN 341
+ +AR +PV ITAL+GAP +Y+L K+ N
Sbjct: 298 SDDLARTLIKPSEIPVGIITALVGAPYFIYLLKKKKDN 335
>gi|124485909|ref|YP_001030525.1| hypothetical protein Mlab_1089 [Methanocorpusculum labreanum Z]
gi|124363450|gb|ABN07258.1| transport system permease protein [Methanocorpusculum labreanum Z]
Length = 355
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 105/338 (31%), Positives = 189/338 (55%), Gaps = 5/338 (1%)
Query: 6 VLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITA 65
V +++ ++ V F +++ +G+V IP+ + + G + ++ I+W R+PQ++TA
Sbjct: 19 VTIIVIGIIATVVMFLVSVSVGAVSIPIPDIITTIFGGGGTSL-YERIIWNIRIPQALTA 77
Query: 66 LVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS-IGGVALSKLGYI 124
+VAGAGL+++G+ MQ+V RNPLA P LG+SS A+ G A ILL G+ G +++ I
Sbjct: 78 IVAGAGLAIAGVSMQSVLRNPLASPFTLGLSSAAAFGAAVGILLFGAGTTGSSIADAVVI 137
Query: 125 GEIALTIAATAGALSVMTLIVFVSQKVKGSV--TLLIIGVMIGYVANAIIGVFKYFSVEE 182
LT + + T+I+ K++ + T+++ GV I + +A + +YF +
Sbjct: 138 NNPYLTTISAFVFSILTTVIILFIAKIRSATPETMILAGVAISSLFSAGLMAIQYFVDDT 197
Query: 183 DIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIK 242
+ + V W G AR S ++ L + +I N + G+ AK LG+N++
Sbjct: 198 RLASIVFWQFGDVARASWTELGLITLMTVICFIYFIYKRWDYNSIDAGEETAKGLGVNVE 257
Query: 243 RARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLAL 302
R RL + + +++A++ A+ G + F+GL PH+ R ++ DHR L+PA+ + G+ L L
Sbjct: 258 RTRLLGMIAASLISAVIVAFLGIIGFVGLVCPHMMRRVI-GDDHRFLIPASFVCGAVLLL 316
Query: 303 LCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+ + IAR LPV +TA +GAP+ +Y++ R+
Sbjct: 317 VSDTIARTLIAPHVLPVAVLTAFLGAPVFLYLIIRGRR 354
>gi|123440714|ref|YP_001004706.1| hemin transport system permease protein HmuU [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|1619624|emb|CAA54863.1| hemin permease [Yersinia enterocolitica]
gi|122087675|emb|CAL10458.1| hemin transport system permease protein HmuU [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 334
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 104/316 (32%), Positives = 178/316 (56%), Gaps = 14/316 (4%)
Query: 26 LGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRN 85
+G++ + R++W+ A + W NI R+P+ + A+V G L+VSG MQ +FRN
Sbjct: 28 MGALTLSFRTLWHASLDDAMWHI-WLNI----RLPRVLLAVVVGCALAVSGAIMQGLFRN 82
Query: 86 PLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
PLA P +LGISSGA+L V +I++ S+ + + + + A G+L++ +I
Sbjct: 83 PLADPGLLGISSGAALCVGLIIVMPFSLPPL-------LALYSHMVGAFIGSLAISAIIF 135
Query: 146 FVSQKVKGSVT-LLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMT 204
+S+ G+++ LL+ G+ I + A +GV Y S ++ +R + +W +GS + + +
Sbjct: 136 TLSRWGHGNLSRLLLAGIAINALCGAAVGVLTYISDDQQLRQFSLWSMGSLGQAQWSTLM 195
Query: 205 LFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCG 264
+ +++ L L + LNLL LGD A LG+N+K+A+L ++ S IL A G
Sbjct: 196 VAASLILPACVLGLLQARQLNLLQLGDEEAHYLGVNVKQAKLRLLLLSAILIGAAVAVSG 255
Query: 265 PVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITA 324
+ F+GL VPHL R + +DHR L+P A L G+ L L + +AR +PV IT+
Sbjct: 256 VIGFIGLVVPHLIR-MRIGADHRWLLPGAALGGACLLLTADTLARTLVAPAEMPVGLITS 314
Query: 325 LIGAPIVVYVLFSKRK 340
L+G P ++++ +R+
Sbjct: 315 LLGGPYFLWLILRQRE 330
>gi|146311387|ref|YP_001176461.1| transport system permease protein [Enterobacter sp. 638]
gi|145318263|gb|ABP60410.1| transport system permease protein [Enterobacter sp. 638]
Length = 351
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 92/287 (32%), Positives = 166/287 (57%), Gaps = 14/287 (4%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLG-VASVILL 109
Q VW+ R+P+++ ++ GA L++ G MQ +F NPLA P +LG+S+GA +G +A+V+L
Sbjct: 74 QLFVWQIRLPRTVAVILVGAALALCGTMMQALFENPLAEPGLLGVSNGAGVGLIAAVMLG 133
Query: 110 SGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVAN 169
G++ G ++S + A AGAL + +++ +++ + LL+ GV +G + +
Sbjct: 134 QGALSGWSVS-----------VCAIAGALLITVILLRFARRNLSTSRLLLAGVALGIICS 182
Query: 170 AIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLL 229
A++ YFS D+R + W +G F V Q L + ++ I++ S LN+L L
Sbjct: 183 ALMTWAVYFSTSFDLRQLMYWMMGGFGGVDWRQGWLMLLLVPIIIWAS-CQSAPLNMLAL 241
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A+ LGL+I R ++ G + + A G + F+GL +PH+ R L +DHR L
Sbjct: 242 GETSARQLGLSIDVWRKVLVVAIGWMVGVSVALAGAIGFIGLVIPHMLR-LGGMTDHRTL 300
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
+PA+ + G++ L+ +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 301 LPASAVAGAATLLIADIVARLALTAAELPIGVVTATLGAPVFIWLLL 347
>gi|77962548|ref|ZP_00826367.1| COG0609: ABC-type Fe3+-siderophore transport system, permease
component [Yersinia mollaretii ATCC 43969]
Length = 334
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 102/316 (32%), Positives = 178/316 (56%), Gaps = 14/316 (4%)
Query: 26 LGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRN 85
+G++ + R++W+ A + W NI R+P+ + A+V G L+VSG MQ +FRN
Sbjct: 28 MGALTLSFRTLWHASLDDAMWHI-WLNI----RLPRVLLAVVVGCALAVSGAIMQGLFRN 82
Query: 86 PLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
PLA P +LGISSGA+L V +I++ S+ + + + + A G+L++ +I
Sbjct: 83 PLADPGLLGISSGAALCVGLIIIMPFSLPPL-------LALYSHMVGAFIGSLAISAIIF 135
Query: 146 FVSQKVKGSVT-LLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMT 204
+S+ G+++ LL+ G+ I + A +GV Y S ++ +R + +W +GS + + +
Sbjct: 136 TLSRWGHGNLSRLLLAGIAINALCGAAVGVLTYISDDQQLRQFSLWSMGSLGQAQWSTLM 195
Query: 205 LFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCG 264
+ +++ L + + LNLL LGD A LG+N+++A+L ++ S IL A G
Sbjct: 196 VAASLILPACVLGLMQARQLNLLQLGDEEAHYLGVNVRQAKLRLLLLSAILIGAAVAVSG 255
Query: 265 PVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITA 324
+ F+GL VPHL R + +DHR L+P A L G+ L L + +AR +PV IT+
Sbjct: 256 VIGFIGLVVPHLIR-MRIGADHRWLLPGAALGGACLLLTADTLARTLVAPAEMPVGLITS 314
Query: 325 LIGAPIVVYVLFSKRK 340
L+G P ++++ +R+
Sbjct: 315 LLGGPYFLWLILRQRE 330
>gi|77973335|ref|ZP_00828884.1| COG0609: ABC-type Fe3+-siderophore transport system, permease
component [Yersinia frederiksenii ATCC 33641]
Length = 334
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 102/316 (32%), Positives = 178/316 (56%), Gaps = 14/316 (4%)
Query: 26 LGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRN 85
+G++ + R++W+ A + W NI R+P+ + A+V G L+VSG MQ +FRN
Sbjct: 28 MGALTLSFRTLWHASLDDAMWHI-WLNI----RLPRVLLAVVVGCALAVSGAIMQGLFRN 82
Query: 86 PLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
PLA P +LGISSGA+L V +I++ S+ + + + + A G+L++ +I
Sbjct: 83 PLADPGLLGISSGAALCVGLIIVMPFSLPPL-------LALYSHMVGAFIGSLAISAIIF 135
Query: 146 FVSQKVKGSVT-LLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMT 204
+S+ G+++ LL+ G+ I + A +GV Y S ++ +R + +W +GS + + +
Sbjct: 136 TLSRWGHGNLSRLLLAGIAINALCGAAVGVLTYISDDQQLRQFSLWSMGSLGQAQWSTLL 195
Query: 205 LFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCG 264
+ +++ L L + LNLL LGD A LG+N+++A+L ++ S +L A G
Sbjct: 196 VATSLILPACVLGLLQARQLNLLQLGDEEAHYLGVNVRQAKLRLLLLSAVLIGAAVAVSG 255
Query: 265 PVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITA 324
+ F+GL VPHL R + +DHR L+P A L G+ L L + +AR +PV IT+
Sbjct: 256 VIGFIGLVVPHLIR-MRIGADHRWLLPGAALGGACLLLTADTLARTLVAPAEMPVGLITS 314
Query: 325 LIGAPIVVYVLFSKRK 340
L+G P ++++ +R+
Sbjct: 315 LLGGPYFLWLILRQRE 330
>gi|77957437|ref|ZP_00821493.1| COG0609: ABC-type Fe3+-siderophore transport system, permease
component [Yersinia bercovieri ATCC 43970]
Length = 334
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 102/316 (32%), Positives = 178/316 (56%), Gaps = 14/316 (4%)
Query: 26 LGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRN 85
+G++ + R++W+ A + W NI R+P+ + A+V G L+VSG MQ +FRN
Sbjct: 28 MGALTLSFRTLWHASLDDAMWHI-WLNI----RLPRVLLAVVVGCALAVSGAIMQGLFRN 82
Query: 86 PLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
PLA P +LGISSGA+L V +I++ S+ + + + + A G+L++ +I
Sbjct: 83 PLADPGLLGISSGAALCVGLIIIMPFSLPPL-------LALYSHMVGAFIGSLAISAIIF 135
Query: 146 FVSQKVKGSVT-LLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMT 204
+S+ G+++ LL+ G+ I + A +GV Y S ++ +R + +W +GS + + +
Sbjct: 136 TLSRWGHGNLSRLLLAGIAINALCGAAVGVLTYISDDQQLRQFSLWSMGSLGQAQWSTLM 195
Query: 205 LFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCG 264
+ +++ L + + LNLL LGD A LG+N+++A+L ++ S IL A G
Sbjct: 196 VAASLILPACLLGLMQARQLNLLQLGDEEAHYLGVNVRQAKLRLLLLSAILIGAAVAVSG 255
Query: 265 PVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITA 324
+ F+GL VPHL R + +DHR L+P A L G+ L L + +AR +PV IT+
Sbjct: 256 VIGFIGLVVPHLIR-MRIGADHRWLLPGAALGGACLLLTADTLARTLVAPAEMPVGLITS 314
Query: 325 LIGAPIVVYVLFSKRK 340
L+G P ++++ +R+
Sbjct: 315 LLGGPYFLWLILRQRE 330
>gi|72162784|ref|YP_290441.1| FecCD-family membrane transport protein [Thermobifida fusca YX]
gi|71916516|gb|AAZ56418.1| FecCD-family membrane transport protein [Thermobifida fusca YX]
Length = 367
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 109/356 (30%), Positives = 195/356 (54%), Gaps = 27/356 (7%)
Query: 1 MKRYTVL----VLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIV-------CGSAEEPVV 49
++R TVL +L +++++ + +G+ HIP V V G A +P+
Sbjct: 21 VRRATVLRGTVLLTVLAIALGAVALVAAGIGAYHIPPLEVAGSVFRGLGLDWGEAADPLA 80
Query: 50 WQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILL 109
++W R P+ + A++ G+ L+++G MQ +F NPLA P V+G+SSGA++G +I L
Sbjct: 81 -DEVLWNVRFPRVVLAMIVGSSLALAGAMMQGIFGNPLAEPGVIGVSSGATVGAVLIIAL 139
Query: 110 SGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGS---VTLLIIGVMIGY 166
S LGY I A+ + V T++V+V + G VTLL+ G+ +
Sbjct: 140 GAS-------ALGY----WTVIVASFLSGMVTTVLVYVLSRSGGRTEVVTLLLTGIAVNA 188
Query: 167 VANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNL 226
VA A+IG YFS + ++R+ W +GS A + ++ + + + + + + L+L
Sbjct: 189 VAGALIGAATYFSEDAELRSITNWQMGSLAAATWFKVAAALPLAVAGIIAAPFFARRLDL 248
Query: 227 LLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDH 286
L LG+ A++LG++++R R +I +LT+ A+ G + F+GL VPH+ R ++ H
Sbjct: 249 LSLGESPARHLGVDVERMRQALIVVIAMLTSSAVAFAGIISFVGLVVPHMVR-MIAGPGH 307
Query: 287 RVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKNE 342
RVL+PA++L G+ + + +L+AR+ +P+ ITAL+G P ++L+ R +
Sbjct: 308 RVLLPASVLGGALVLVAADLVARVAAAPQEVPLGIITALVGGPFFFWLLYRTRARQ 363
>gi|146311394|ref|YP_001176468.1| transport system permease protein [Enterobacter sp. 638]
gi|145318270|gb|ABP60417.1| transport system permease protein [Enterobacter sp. 638]
Length = 330
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 110/340 (32%), Positives = 188/340 (55%), Gaps = 17/340 (5%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKS-RV 59
M R VL L ++ S+ L G++ +P+ +W S + + Q +W + R+
Sbjct: 1 MARRIVLSLWMLAFSLALMTLLATGFGALRLPVTLLW-----SGHDEALRQ--IWLTIRL 53
Query: 60 PQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALS 119
P+ + A+V G L+++G MQ +FRNPLA P +LGISSGA+ VA ++L S+ + +
Sbjct: 54 PRVLLAVVIGGSLALAGCVMQGLFRNPLADPGLLGISSGAACAVALWVVLPFSLPALLML 113
Query: 120 KLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVT-LLIIGVMIGYVANAIIGVFKYF 178
A +AA GAL+ +I +SQ+ S++ LL++G+ I + AI+GV +
Sbjct: 114 -------YAPMLAAFVGALAATLVIFLLSQQRDSSLSRLLLVGIAINALCGAIVGVMSWV 166
Query: 179 SVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLG 238
S + +R +WG+GS + + +MI + + + L LNLL LGD A LG
Sbjct: 167 SNDAQLRQLSLWGMGSLGSAQWSTLLAAASLMIPTVMIIWRLSGALNLLQLGDEEAHYLG 226
Query: 239 LNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGS 298
++++ + ++ CS +L A A G + F+GL VPHL R L +DHR ++P ++L G+
Sbjct: 227 VDVRAVQRILLLCSALLVASAVAVSGVIGFIGLVVPHLMRMWL-GADHRAVIPGSVLAGA 285
Query: 299 SLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSK 338
L L+ + +AR +PV +T+L+GAP ++++F +
Sbjct: 286 VLLLIADTLARTVVAPAEMPVGLLTSLLGAPWFLWLIFRR 325
>gi|77978157|ref|ZP_00833590.1| COG0609: ABC-type Fe3+-siderophore transport system, permease
component [Yersinia intermedia ATCC 29909]
Length = 334
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 103/316 (32%), Positives = 177/316 (56%), Gaps = 14/316 (4%)
Query: 26 LGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRN 85
+G++ + R++W+ A + W NI R+P+ + A+V G L+VSG MQ +FRN
Sbjct: 28 MGALTLSFRTLWHASLDDAMWHI-WLNI----RLPRVLLAVVVGCALAVSGAIMQGLFRN 82
Query: 86 PLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
PLA P +LGISSGA+L V +I++ S+ + + + + A G+L++ +I
Sbjct: 83 PLADPGLLGISSGAALCVGLIIVMPFSLPPL-------LALYSHMVGAFIGSLAISVIIF 135
Query: 146 FVSQKVKGSVT-LLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMT 204
+S+ G+++ LL+ G+ I + A +GV Y S ++ +R + +W +GS + + +
Sbjct: 136 TLSRWGHGNLSRLLLAGIAINALCGAAVGVLTYISDDQQLRQFSLWSMGSLGQAQWSTVM 195
Query: 205 LFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCG 264
+ +++ L L + LNLL LGD A LG+N+ +A+L ++ S IL A G
Sbjct: 196 VAASLILPACVLGLLQARQLNLLQLGDEEAHYLGVNVHQAKLRLLLLSAILIGAAVAVSG 255
Query: 265 PVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITA 324
+ F+GL VPHL R + +DHR L+P A L G+ L L + +AR +PV IT+
Sbjct: 256 VIGFIGLVVPHLIR-MRIGADHRWLLPGAALGGACLLLTADTLARTLVAPAEMPVGLITS 314
Query: 325 LIGAPIVVYVLFSKRK 340
L+G P ++++ +R+
Sbjct: 315 LLGGPYFLWLILRQRE 330
>gi|20092441|ref|NP_618516.1| iron ABC transporter, permease [Methanosarcina acetivorans C2A]
gi|19917700|gb|AAM06996.1| iron ABC transporter, permease [Methanosarcina acetivorans C2A]
Length = 327
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 174/322 (54%), Gaps = 5/322 (1%)
Query: 22 LNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQT 81
+++ +G+ +IP V + G + W +IVW R+PQ +TA+VAGAGLSV+G+ MQ+
Sbjct: 7 MSISIGAANIPPLEVVRTLMGHSVSGR-WDSIVWNIRLPQVLTAIVAGAGLSVAGVIMQS 65
Query: 82 VFRNPLAGPSVLGISSGASLGVA-SVILLSGSIGGVALSKLGYIGEIALTIAATAGALSV 140
+ RNPL P LGIS+ A+ G A SV++L + I +T A G +
Sbjct: 66 ILRNPLGSPFTLGISNAAAFGAAFSVMVLGTGATHTLVGDAVTISNPYVTTAVAFGFSLL 125
Query: 141 MTLIVFVSQKVKGSV--TLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARV 198
+T ++ + +G ++++GV + + A +YF+ + + + V W G +R
Sbjct: 126 VTAVILAFSRFRGVTPEVMILVGVAMSSLFTAGTMFLQYFADDTQLASIVFWTFGDVSRA 185
Query: 199 SGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAI 258
S +++ L ++++ + L N + GD AK LG+N+ R R + CS ++TA
Sbjct: 186 SWSELALITVVVLVSIIYFTLNRWKYNAIDAGDETAKGLGVNVDRVRGRGMICSSLVTAT 245
Query: 259 VTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALP 318
+ A+ G + F+GL PH+ R ++ DHR L+ +I+ GS L L + AR+ LP
Sbjct: 246 IVAFLGVIGFIGLICPHMTRRII-GDDHRFLITGSIVMGSLLLLCADTAARVIIQPYQLP 304
Query: 319 VNSITALIGAPIVVYVLFSKRK 340
V +T+ +GAP +Y++ +R+
Sbjct: 305 VAVLTSFLGAPTFIYLILKERR 326
>gi|62423984|ref|ZP_00379137.1| COG0609: ABC-type Fe3+-siderophore transport system, permease
component [Brevibacterium linens BL2]
Length = 331
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 92/292 (31%), Positives = 170/292 (58%), Gaps = 14/292 (4%)
Query: 52 NIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSG 111
++VW+ RVP+ + ++ GA L++SG +Q++F NPLA P ++G+SSGAS G VI+L+G
Sbjct: 50 SVVWQLRVPRVLMGVLVGAALAISGAALQSLFNNPLADPGIIGVSSGASAGAVGVIVLAG 109
Query: 112 SIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQ--KVKGSVTLLIIGVMIGYVAN 169
S +++ L L + A L+V LI +++ + G+ +L++G+ +G
Sbjct: 110 S----SITWL-------LPLGAFLAGLAVTGLIYGLARPGRNTGTSRMLLVGIAVGSGCQ 158
Query: 170 AIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLL 229
A+ G F + + ++ ++ W +GS A+++ Q + I I L + F+ + L++L L
Sbjct: 159 ALTGFFTFIADDQQLQTLTFWQMGSLAKITWPQFFATVPIFAIGLIVLFVSSRALDVLTL 218
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A++LGLN+KR RL +I + +LT A+ G + F+GL VPH+ R ++ HR L
Sbjct: 219 GEREAQHLGLNVKRTRLIIIVATALLTGAAVAFAGAIGFVGLVVPHIVR-IIVGPGHRGL 277
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKN 341
+P + + G+ L + + +R+ +P+ TA +GAP ++++ RK+
Sbjct: 278 LPISAIVGAILIVAADCASRVVAPPAEVPIGLFTAAVGAPFFLFLVVRMRKS 329
>gi|157083189|gb|ABV12867.1| hypothetical protein CKO_01738 [Citrobacter koseri ATCC BAA-895]
Length = 329
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 98/291 (33%), Positives = 165/291 (56%), Gaps = 20/291 (6%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLG-VASVILLSGS 112
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G +A+V+L G
Sbjct: 55 VWQIRLPRTLAVLLVGAALALSGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQ 114
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAII 172
+ G AL A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 115 LPGWALG-----------FCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSAMM 163
Query: 173 GVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLI---KTLNLLLL 229
YFS D+R + W +G F V Q ++MI L+P+S + + +N+L L
Sbjct: 164 TWAIYFSTSFDLRQLMYWMMGGFGGVDWQQA----WLMIALIPVSLWICCQSQPMNILAL 219
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A+ LGL + R ++ +G + + A G + F+GL +PH+ R L SDHR L
Sbjct: 220 GETSARQLGLPLWFWRNLLVVATGWMVGVSVALAGSIGFIGLVIPHILR-LCGLSDHRAL 278
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+P L G+ LL ++IAR+ LP+ +TA +GAP+ +++L R+
Sbjct: 279 LPGCALAGAIALLLADVIARLALASAELPIGVVTATMGAPVFIWLLLKSRR 329
>gi|124004901|ref|ZP_01689744.1| transport system permease protein [Microscilla marina ATCC 23134]
gi|123989579|gb|EAY29125.1| transport system permease protein [Microscilla marina ATCC 23134]
Length = 343
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 105/339 (30%), Positives = 184/339 (54%), Gaps = 13/339 (3%)
Query: 8 VLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSA---EEPVVWQN--IVWKSRVPQS 62
+LI +SV ++ +G++HI W I+ A EE Q ++W R+P+
Sbjct: 7 ILIVLSVIVLLSLVATSGMGAIHIGFSEWWQILLAKAGWVEEVSDAQKTAVLWVIRLPRV 66
Query: 63 ITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLG 122
IT+L+ GA L++ G +Q +FRNPLA PS++GIS+GA+ A VI+L+ S L G
Sbjct: 67 ITSLLVGASLALCGAALQGLFRNPLADPSIIGISAGAAFSAALVIVLASS-----LLASG 121
Query: 123 YIGEIALTIAATAGAL-SVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFKYFSV 180
+ L++ GA+ S + QK + +VT++++ G+ + +A+A GV + +
Sbjct: 122 WWAGTLLSLVTFLGAVGSTFLVFALARQKHRTNVTMMLLAGIALNALASACTGVLIFVAD 181
Query: 181 EEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLN 240
+ +R+ W LGS + + L + + F L K N L LG+ AK +G+
Sbjct: 182 DAQLRSITFWTLGSLGGANWTTVGLIAFATGLATVFLFRLAKVFNALTLGEQEAKYIGMP 241
Query: 241 IKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSL 300
I+R ++ V+ + + A+CG + F+GL VPH+ R L+ ++R L+PA++L G+ L
Sbjct: 242 IERLKIQVVILTALAIGTAVAFCGMIGFVGLVVPHVLR-LIGGGNYRFLLPASVLAGALL 300
Query: 301 ALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+ +AR +P+ ITAL+GAP+ + +L+ ++
Sbjct: 301 LCWADTLARTVVAPAEIPIGVITALLGAPVFLIILYRQK 339
>gi|121998135|ref|YP_001002922.1| transport system permease protein [Halorhodospira halophila SL1]
gi|121589540|gb|ABM62120.1| transport system permease protein [Halorhodospira halophila SL1]
Length = 363
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 115/326 (35%), Positives = 175/326 (53%), Gaps = 16/326 (4%)
Query: 20 FFLNLVLGSVHIPLRSVWNIVCG----SAEEPVVWQNIVWKSRVPQSITALVAGAGLSVS 75
F L L LG + IPL V V G ++ +N+VW R+P+ TA+VAG GL++
Sbjct: 44 FVLGLGLGPMGIPLSEVVQAVLGRPLGASWVSAQTENVVWNIRLPRLATAVVAGMGLALG 103
Query: 76 GLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATA 135
G+ +Q++ RNP+A P LGI+SGASLG A I+ S GV G +G L
Sbjct: 104 GVILQSLLRNPMASPFTLGIASGASLGAALAIIFGFSAFGV----YGIVGNAFLF----- 154
Query: 136 GALSVMTLIVFVSQ-KVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGS 194
A++V LI+ + Q K ++L++ G+ + Y A + YF+ + R + W +GS
Sbjct: 155 -AMAVSLLILLIGQWKGATPMSLILAGIALMYFFGATTTLLIYFADADATREVMFWSVGS 213
Query: 195 FARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGI 254
+R + + LP+ LN LLLGD A +LG+ + R R+ ++ +
Sbjct: 214 LSRADWESFVFITVALTVTLPVFLWKSGDLNRLLLGDETATSLGIAVGRLRIGLMFLVAL 273
Query: 255 LTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFE 314
L A+ A+ G + FLGL PHL R LL SDHR L+PAA L G+ L L +L++
Sbjct: 274 LVAVTVAFTGGIGFLGLVAPHLAR-LLIGSDHRFLIPAAALIGALLLALADLVSLHAFAS 332
Query: 315 GALPVNSITALIGAPIVVYVLFSKRK 340
LPV +TA IG+P+ +Y++ +R+
Sbjct: 333 VVLPVGVVTAFIGSPLFIYLILRRRE 358
>gi|2738774|gb|AAB94548.1| HutC [Vibrio cholerae]
Length = 373
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 108/343 (31%), Positives = 192/343 (55%), Gaps = 9/343 (2%)
Query: 1 MKRYTVLVLIFISVSIVFFFFL-NLVLGSVHIPLR-SVWNIVCGSAEEPVVWQNIVWKSR 58
++R+ V I VFF L ++ +G ++I + S+ +++ S + ++ R
Sbjct: 32 LRRFPFAVTISCLTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIR 91
Query: 59 VPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVAL 118
+P+++ L+ GA L++ G MQ +FRNPLA P ++G+SSGASLG A I+L + +
Sbjct: 92 LPRTLLCLLVGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDV----V 147
Query: 119 SKLGYIGEIALTIAA-TAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFK 176
S L ++ + L IAA GAL+ + + + K SVT++++ GV I +A A IG
Sbjct: 148 SSLPWVNSLVLPIAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLN 207
Query: 177 YFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKN 236
Y + ++ +R +W +GS A + + + L +I+L LN LLLG+ A++
Sbjct: 208 YLASDQMLRDLTLWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARH 267
Query: 237 LGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILT 296
LG+ +++ + +I S + + + G + F+GL VPH+ R +L DHR L+P + L
Sbjct: 268 LGVPVQKLKREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGR-MLVGPDHRNLVPVSTLL 326
Query: 297 GSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
G+ + L +++AR+ LP+ +TAL+GAP +Y+LF ++
Sbjct: 327 GALMLTLADMVARVAVAPAELPIGIVTALVGAPFFLYLLFQQK 369
>gi|150420985|gb|EDN13270.1| putative hemin ABC transporter, permease protein [Vibrio cholerae
RC385]
Length = 343
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 102/331 (30%), Positives = 188/331 (56%), Gaps = 8/331 (2%)
Query: 12 ISVSIVFFFFLNLVLGSVHIPLR-SVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGA 70
+++++ F ++ +G ++I + S+ +++ S + ++ R+P+++ L+ GA
Sbjct: 14 LTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLLCLLVGA 73
Query: 71 GLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALT 130
L++ G MQ +FRNPLA P ++G+SSGASLG A I+L + +S L ++ + L
Sbjct: 74 ILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDV----VSSLPWVNSLVLP 129
Query: 131 IAA-TAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFKYFSVEEDIRAYV 188
IAA GAL+ + + + K SVT++++ GV I +A A IG Y + ++ +R
Sbjct: 130 IAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRDLT 189
Query: 189 IWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYV 248
+W +GS A + + + L +I+L LN LLLG+ A++LG+ +++ + +
Sbjct: 190 LWSMGSMAGATTSSIVLCCVTLIVLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKREM 249
Query: 249 ISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIA 308
I S + + + G + F+GL VPH+ R +L DHR L+P + L G+ + L +++A
Sbjct: 250 ILLSAVGVGVAVSAAGMIGFVGLVVPHIGR-MLVGPDHRNLVPVSTLLGALMLTLADMVA 308
Query: 309 RMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
R+ LP+ +TAL+GAP +Y+LF ++
Sbjct: 309 RVAVAPAELPIGIVTALVGAPFFLYLLFQQK 339
>gi|153934272|ref|YP_001383347.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium botulinum A str. ATCC 19397]
gi|153934850|ref|YP_001386895.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium botulinum A str. Hall]
gi|152930316|gb|ABS35816.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium botulinum A str. ATCC 19397]
gi|152930764|gb|ABS36263.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium botulinum A str. Hall]
Length = 355
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 102/285 (35%), Positives = 161/285 (56%), Gaps = 9/285 (3%)
Query: 52 NIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSG 111
NIV+K R+P+ + A+V+G L++ G+ MQT+ RN LA P +LGISSGAS G I+L
Sbjct: 69 NIVFKLRLPRLLLAIVSGGALALVGILMQTLTRNSLADPYILGISSGASAGATLSIVLG- 127
Query: 112 SIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAI 171
LS G+ G IAL A S+M + KV L++ GV + + A+
Sbjct: 128 -----VLSSFGHFG-IALGAFLGAMIASIMVFKISGVSKVYSKTKLILTGVAVSSIFTAV 181
Query: 172 IGVFKYFSVEED-IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLG 230
F+ + +++ V W +GS A + NQ+ + IM+I LS LL K L+ +LLG
Sbjct: 182 TNFIITFARNDSLVKSAVFWTIGSLAGANYNQVKFSLVIMVITAILSMLLYKDLDAMLLG 241
Query: 231 DGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLM 290
+ AKN+G+N K +++ S +LT + A+ G + F+GL VPH+ R ++ +S H+ L+
Sbjct: 242 EAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGIIGFVGLIVPHIARQMVGSS-HKKLI 300
Query: 291 PAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
P I+ GS L ++ + IAR +P+ ITA +G P +Y++
Sbjct: 301 PFGIVIGSILMVITDTIARTILSPQEVPIGVITAFLGGPFFLYLM 345
>gi|74311969|ref|YP_310388.1| vitamin B12 transport permease protein [Shigella sonnei Ss046]
gi|73855446|gb|AAZ88153.1| vitamin B12 transport permease protein [Shigella sonnei Ss046]
Length = 326
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 163/283 (57%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 110 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 162 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 220
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 221 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 279
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 280 ALAGASAVLLADIVARLALAAAELPIGVVTATLGAPVFIWLLL 322
>gi|116214970|ref|ZP_01481109.1| hypothetical protein VchoR_02003025 [Vibrio cholerae RC385]
Length = 335
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 102/331 (30%), Positives = 188/331 (56%), Gaps = 8/331 (2%)
Query: 12 ISVSIVFFFFLNLVLGSVHIPLR-SVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGA 70
+++++ F ++ +G ++I + S+ +++ S + ++ R+P+++ L+ GA
Sbjct: 6 LTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLLCLLVGA 65
Query: 71 GLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALT 130
L++ G MQ +FRNPLA P ++G+SSGASLG A I+L + +S L ++ + L
Sbjct: 66 ILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDV----VSSLPWVNSLVLP 121
Query: 131 IAA-TAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFKYFSVEEDIRAYV 188
IAA GAL+ + + + K SVT++++ GV I +A A IG Y + ++ +R
Sbjct: 122 IAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRDLT 181
Query: 189 IWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYV 248
+W +GS A + + + L +I+L LN LLLG+ A++LG+ +++ + +
Sbjct: 182 LWSMGSMAGATTSSIVLCCVTLIVLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKREM 241
Query: 249 ISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIA 308
I S + + + G + F+GL VPH+ R +L DHR L+P + L G+ + L +++A
Sbjct: 242 ILLSAVGVGVAVSAAGMIGFVGLVVPHIGR-MLVGPDHRNLVPVSTLLGALMLTLADMVA 300
Query: 309 RMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
R+ LP+ +TAL+GAP +Y+LF ++
Sbjct: 301 RVAVAPAELPIGIVTALVGAPFFLYLLFQQK 331
>gi|148378965|ref|YP_001253506.1| iron(III) dicitrate ABC transporter,permease protein [Clostridium
botulinum A str. ATCC 3502]
gi|148288449|emb|CAL82526.1| putative iron(III) dicitrate ABC transporter,permease protein
[Clostridium botulinum A str. ATCC 3502]
Length = 359
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 102/285 (35%), Positives = 161/285 (56%), Gaps = 9/285 (3%)
Query: 52 NIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSG 111
NIV+K R+P+ + A+V+G L++ G+ MQT+ RN LA P +LGISSGAS G I+L
Sbjct: 73 NIVFKLRLPRLLLAIVSGGALALVGILMQTLTRNSLADPYILGISSGASAGATLSIVLG- 131
Query: 112 SIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAI 171
LS G+ G IAL A S+M + KV L++ GV + + A+
Sbjct: 132 -----VLSSFGHFG-IALGAFLGAMIASIMVFKISGVSKVYSKTKLILTGVAVSSIFTAV 185
Query: 172 IGVFKYFSVEED-IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLG 230
F+ + +++ V W +GS A + NQ+ + IM+I LS LL K L+ +LLG
Sbjct: 186 TNFIITFARNDSLVKSAVFWTIGSLAGANYNQVKFSLVIMVITAILSMLLYKDLDAMLLG 245
Query: 231 DGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLM 290
+ AKN+G+N K +++ S +LT + A+ G + F+GL VPH+ R ++ +S H+ L+
Sbjct: 246 EAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGIIGFVGLIVPHIARQMVGSS-HKKLI 304
Query: 291 PAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
P I+ GS L ++ + IAR +P+ ITA +G P +Y++
Sbjct: 305 PFGIVIGSILMVITDTIARTILSPQEVPIGVITAFLGGPFFLYLM 349
>gi|121586685|ref|ZP_01676469.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
2740-80]
gi|153222804|ref|ZP_01953448.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
MAK 757]
gi|153819206|ref|ZP_01971873.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
NCTC 8457]
gi|121549113|gb|EAX59148.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
2740-80]
gi|124118585|gb|EAY37328.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
MAK 757]
gi|126510240|gb|EAZ72834.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
NCTC 8457]
Length = 343
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 108/343 (31%), Positives = 192/343 (55%), Gaps = 9/343 (2%)
Query: 1 MKRYTVLVLIFISVSIVFFFFL-NLVLGSVHIPLR-SVWNIVCGSAEEPVVWQNIVWKSR 58
++R+ V I VFF L ++ +G ++I + S+ +++ S + ++ R
Sbjct: 2 LRRFPFAVTISCLTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIR 61
Query: 59 VPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVAL 118
+P+++ L+ GA L++ G MQ +FRNPLA P ++G+SSGASLG A I+L + +
Sbjct: 62 LPRTLLCLLVGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDV----V 117
Query: 119 SKLGYIGEIALTIAA-TAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFK 176
S L ++ + L IAA GAL+ + + + K SVT++++ GV I +A A IG
Sbjct: 118 SSLPWVNSLVLPIAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGACIGYLN 177
Query: 177 YFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKN 236
Y + ++ +R +W +GS A + + + L +I+L LN LLLG+ A++
Sbjct: 178 YLASDQMLRDLTLWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARH 237
Query: 237 LGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILT 296
LG+ +++ + +I S + + + G + F+GL VPH+ R +L DHR L+P + L
Sbjct: 238 LGVPVQKLKREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGR-MLVGPDHRNLVPVSTLL 296
Query: 297 GSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
G+ + L +++AR+ LP+ +TAL+GAP +Y+LF ++
Sbjct: 297 GALMLTLADMVARVAVAPAELPIGIVTALVGAPFFLYLLFQQK 339
>gi|153212347|ref|ZP_01948129.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
1587]
gi|124116555|gb|EAY35375.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
1587]
Length = 343
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 103/336 (30%), Positives = 191/336 (56%), Gaps = 8/336 (2%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLR-SVWNIVCGSAEEPVVWQNIVWKSRVPQSITA 65
+ +I +++++ F ++ +G ++I + S+ +++ S + ++ R+P+++
Sbjct: 9 VTIICLTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLLC 68
Query: 66 LVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIG 125
L+ GA L++ G MQ +FRNPLA P ++G+SSGASLG A I+L + +S L ++
Sbjct: 69 LLVGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDV----VSSLPWVN 124
Query: 126 EIALTIAA-TAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFKYFSVEED 183
+ L IAA GAL+ + + + K SVT++++ GV I +A A IG Y + ++
Sbjct: 125 SLVLPIAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQM 184
Query: 184 IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKR 243
+R +W +GS A + + + L +I+L LN LLLG+ A++LG+ +++
Sbjct: 185 LRDLTLWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQK 244
Query: 244 ARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALL 303
+ +I S + + + G + F+GL VPH+ R +L DHR L+P + L G+ + L
Sbjct: 245 LKREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGR-MLVGPDHRNLVPVSTLLGALMLTL 303
Query: 304 CNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+++AR+ LP+ +TAL+GAP +Y+LF ++
Sbjct: 304 ADMVARVAVAPAELPIGIVTALVGAPFFLYLLFQQK 339
>gi|153938502|ref|YP_001390325.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium botulinum F str. Langeland]
gi|152934398|gb|ABS39896.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium botulinum F str. Langeland]
Length = 355
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 101/285 (35%), Positives = 161/285 (56%), Gaps = 9/285 (3%)
Query: 52 NIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSG 111
NIV+K R+P+ + A+V+G L++ G+ MQT+ RN LA P +LGISSGAS G I+L
Sbjct: 69 NIVFKLRLPRLLLAIVSGGALALVGILMQTLTRNSLADPYILGISSGASAGATLSIVLG- 127
Query: 112 SIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAI 171
LS G+ G IAL A S+M + KV L++ GV + + A+
Sbjct: 128 -----VLSSFGHFG-IALGAFLGAMIASIMVFKISGVSKVYSKTKLILTGVAVSSIFTAV 181
Query: 172 IGVFKYFSVEED-IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLG 230
F+ + +++ V W +GS A + NQ+ + +M+I LS LL K L+ +LLG
Sbjct: 182 TNFIITFARNDSLVKSAVFWTIGSLAGANYNQVKFSLVVMLITAILSMLLYKDLDAMLLG 241
Query: 231 DGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLM 290
+ AKN+G+N K +++ S +LT + A+ G + F+GL VPH+ R ++ +S H+ L+
Sbjct: 242 EAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGVIGFVGLIVPHIARQMVGSS-HKKLI 300
Query: 291 PAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
P I+ GS L ++ + IAR +P+ ITA +G P +Y++
Sbjct: 301 PFGIVIGSILMVITDTIARTILSPQEVPIGVITAFLGGPFFLYLM 345
>gi|156934282|ref|YP_001438198.1| hypothetical protein ESA_02113 [Enterobacter sakazakii ATCC
BAA-894]
gi|156532536|gb|ABU77362.1| hypothetical protein ESA_02113 [Enterobacter sakazakii ATCC
BAA-894]
Length = 333
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 95/286 (33%), Positives = 161/286 (56%), Gaps = 18/286 (6%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P++I ++ GA L++ G MQ +F NPLA P +LG+S+GA +G+ + ++L G
Sbjct: 59 VWQIRLPRTIAVVLVGAALALCGAMMQALFENPLAEPGLLGVSNGAGVGLVAAVMLGG-- 116
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + L + A AGAL +++ +++ + LL+ GV +G V +A++
Sbjct: 117 --------GVLPGWLLGLCAIAGALIATLILLHFARRHLTTSRLLLAGVALGIVCSALMT 168
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLP---LSFLLIKTLNLLLLG 230
YFS D+R + W +G F+ + Q ++M+ LLP + + LN+L LG
Sbjct: 169 WAVYFSTSLDLRQLMYWMMGGFSGIDWQQG----WLMLALLPPLVWGGMQARALNMLSLG 224
Query: 231 DGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLM 290
+ A+ LGL + R ++ +G L + A G + F+GL VPH+ R L +DHR L+
Sbjct: 225 ETSARQLGLPVWLWRNALVIATGWLAGVSVALAGAIGFVGLVVPHMLR-LCGITDHRALL 283
Query: 291 PAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
PAA+L G + L ++IAR+ LP+ +TA +GAP+ +++L
Sbjct: 284 PAAMLAGGGVLLAADIIARLTLAAAELPIGVVTATLGAPVFIWLLL 329
>gi|153801391|ref|ZP_01955977.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
MZO-3]
gi|124123057|gb|EAY41800.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
MZO-3]
gi|150425329|gb|EDN17105.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
AM-19226]
Length = 343
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 103/331 (31%), Positives = 188/331 (56%), Gaps = 8/331 (2%)
Query: 12 ISVSIVFFFFLNLVLGSVHIPLR-SVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGA 70
+++++ F ++ +G ++I + S+ +++ S + ++ R+P++I L+ GA
Sbjct: 14 LTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTILCLLVGA 73
Query: 71 GLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALT 130
L++ G MQ +FRNPLA P ++G+SSGASLG A I+L + +S L ++ + L
Sbjct: 74 ILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDV----VSSLPWVNSLVLP 129
Query: 131 IAA-TAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFKYFSVEEDIRAYV 188
IAA GAL+ + + + K SVT++++ GV I +A A IG Y + ++ +R
Sbjct: 130 IAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRDLT 189
Query: 189 IWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYV 248
+W +GS A + + + L +I+L LN LLLG+ A++LG+ +++ + +
Sbjct: 190 LWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKREM 249
Query: 249 ISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIA 308
I S + + + G + F+GL VPH+ R +L DHR L+P + L G+ + L +++A
Sbjct: 250 ILLSAVGVGVAVSAAGMIGFVGLVVPHIGR-MLVGPDHRNLVPVSTLLGALMLTLADMVA 308
Query: 309 RMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
R+ LP+ +TAL+GAP +Y+LF ++
Sbjct: 309 RVAVAPAELPIGIVTALVGAPFFLYLLFQQK 339
>gi|125622833|gb|EAZ51151.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
V51]
Length = 343
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 102/331 (30%), Positives = 188/331 (56%), Gaps = 8/331 (2%)
Query: 12 ISVSIVFFFFLNLVLGSVHIPLR-SVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGA 70
+++++ F ++ +G ++I + S+ +++ S + ++ R+P+++ L+ GA
Sbjct: 14 LTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLLCLLVGA 73
Query: 71 GLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALT 130
L++ G MQ +FRNPLA P ++G+SSGASLG A I+L + +S L ++ + L
Sbjct: 74 ILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDV----VSSLPWVNSLVLP 129
Query: 131 IAA-TAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFKYFSVEEDIRAYV 188
IAA GAL+ + + + K SVT++++ GV I +A A IG Y + ++ +R
Sbjct: 130 IAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRDLT 189
Query: 189 IWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYV 248
+W +GS A + + + L +I+L LN LLLG+ A++LG+ +++ + +
Sbjct: 190 LWSMGSVASATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKREM 249
Query: 249 ISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIA 308
I S + + + G + F+GL VPH+ R +L DHR L+P + L G+ + L +++A
Sbjct: 250 ILLSAVGVGVAVSAAGMIGFVGLVVPHIGR-MLVGPDHRNLVPVSTLLGALMLTLADMVA 308
Query: 309 RMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
R+ LP+ +TAL+GAP +Y+LF ++
Sbjct: 309 RVAVAPAELPIGIVTALVGAPFFLYLLFQQK 339
>gi|15601668|ref|NP_233299.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
O1 biovar eltor str. N16961]
gi|121730185|ref|ZP_01682576.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
V52]
gi|147672216|ref|YP_001215164.1| putative hemin ABC transporter, permease protein [Vibrio cholerae
O395]
gi|153823478|ref|ZP_01976145.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
B33]
gi|153828078|ref|ZP_01980745.1| putative hemin ABC transporter, permease protein [Vibrio cholerae
623-39]
gi|9658350|gb|AAF96811.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
O1 biovar eltor str. N16961]
gi|121628060|gb|EAX60604.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
V52]
gi|125620043|gb|EAZ48569.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
MO10]
gi|126518992|gb|EAZ76215.1| hemin ABC transporter, permease protein, putative [Vibrio cholerae
B33]
gi|146314599|gb|ABQ19139.1| putative hemin ABC transporter, permease protein [Vibrio cholerae
O395]
gi|148876487|gb|EDL74622.1| putative hemin ABC transporter, permease protein [Vibrio cholerae
623-39]
Length = 343
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 108/343 (31%), Positives = 192/343 (55%), Gaps = 9/343 (2%)
Query: 1 MKRYTVLVLIFISVSIVFFFFL-NLVLGSVHIPLR-SVWNIVCGSAEEPVVWQNIVWKSR 58
++R+ V I VFF L ++ +G ++I + S+ +++ S + ++ R
Sbjct: 2 LRRFPFAVTISCLTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIR 61
Query: 59 VPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVAL 118
+P+++ L+ GA L++ G MQ +FRNPLA P ++G+SSGASLG A I+L + +
Sbjct: 62 LPRTLLCLLVGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDV----V 117
Query: 119 SKLGYIGEIALTIAA-TAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFK 176
S L ++ + L IAA GAL+ + + + K SVT++++ GV I +A A IG
Sbjct: 118 SSLPWVNSLVLPIAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLN 177
Query: 177 YFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKN 236
Y + ++ +R +W +GS A + + + L +I+L LN LLLG+ A++
Sbjct: 178 YLASDQMLRDLTLWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARH 237
Query: 237 LGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILT 296
LG+ +++ + +I S + + + G + F+GL VPH+ R +L DHR L+P + L
Sbjct: 238 LGVPVQKLKREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGR-MLVGPDHRNLVPVSTLL 296
Query: 297 GSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
G+ + L +++AR+ LP+ +TAL+GAP +Y+LF ++
Sbjct: 297 GALMLTLADMVARVAVAPAELPIGIVTALVGAPFFLYLLFQQK 339
>gi|20808280|ref|NP_623451.1| ABC-type cobalamin/Fe3+-siderophores transport systems, permease
components [Thermoanaerobacter tengcongensis MB4]
gi|20516881|gb|AAM25055.1| ABC-type cobalamin/Fe3+-siderophores transport systems, permease
components [Thermoanaerobacter tengcongensis MB4]
Length = 354
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 97/310 (31%), Positives = 170/310 (54%), Gaps = 4/310 (1%)
Query: 27 GSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNP 86
GS + ++ V + G EE ++ IVW R+P+ ++A++AG GLSV+G Q++ RNP
Sbjct: 42 GSAGLSVKDVVKTLVGQGEER--FRIIVWNIRMPRILSAMMAGVGLSVAGCVTQSILRNP 99
Query: 87 LAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVF 146
LA P LGIS GA+ G A I+L G+ + + I A G++ +++
Sbjct: 100 LASPFTLGISQGAAFGAAVAIILFGAGSTTNPDSVIINNPYLVVIFAFLGSMGSTVVVLM 159
Query: 147 VSQKVKGSVTLLII-GVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTL 205
+++ + + +++ GV +G + +AI + +YF+ + + + V W G R S +T+
Sbjct: 160 LAKNFRVTPEAMVLAGVALGSLFSAITMILQYFADDVKVASIVFWTFGDLGRASWRDLTI 219
Query: 206 FIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGP 265
++ I L L N L G+ AK LG+ +++ RLY + S ++ A++T++ G
Sbjct: 220 MSVVVGISLIYFMLNRWNYNALDSGEETAKGLGVEVEKIRLYGMFMSSLVAAVITSFVGI 279
Query: 266 VIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITAL 325
+ F+GL PH+ R L+ DHR L+PA+ G+ + L + + R LPV +IT+
Sbjct: 280 IGFVGLVGPHIMRRLI-GGDHRFLIPASSAIGALILLASDTLGRTIISPIVLPVGAITSF 338
Query: 326 IGAPIVVYVL 335
+GAP+ +YVL
Sbjct: 339 LGAPVFLYVL 348
>gi|116221899|ref|ZP_01487301.1| hypothetical protein VchoV5_02000081 [Vibrio cholerae V51]
Length = 335
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 102/331 (30%), Positives = 188/331 (56%), Gaps = 8/331 (2%)
Query: 12 ISVSIVFFFFLNLVLGSVHIPLR-SVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGA 70
+++++ F ++ +G ++I + S+ +++ S + ++ R+P+++ L+ GA
Sbjct: 6 LTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLLCLLVGA 65
Query: 71 GLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALT 130
L++ G MQ +FRNPLA P ++G+SSGASLG A I+L + +S L ++ + L
Sbjct: 66 ILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDV----VSSLPWVNSLVLP 121
Query: 131 IAA-TAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFKYFSVEEDIRAYV 188
IAA GAL+ + + + K SVT++++ GV I +A A IG Y + ++ +R
Sbjct: 122 IAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRDLT 181
Query: 189 IWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYV 248
+W +GS A + + + L +I+L LN LLLG+ A++LG+ +++ + +
Sbjct: 182 LWSMGSVASATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKREM 241
Query: 249 ISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIA 308
I S + + + G + F+GL VPH+ R +L DHR L+P + L G+ + L +++A
Sbjct: 242 ILLSAVGVGVAVSAAGMIGFVGLVVPHIGR-MLVGPDHRNLVPVSTLLGALMLTLADMVA 300
Query: 309 RMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
R+ LP+ +TAL+GAP +Y+LF ++
Sbjct: 301 RVAVAPAELPIGIVTALVGAPFFLYLLFQQK 331
>gi|20089997|ref|NP_616072.1| iron ABC transporter, permease protein [Methanosarcina acetivorans
C2A]
gi|19914963|gb|AAM04552.1| iron ABC transporter, permease protein [Methanosarcina acetivorans
C2A]
Length = 349
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 104/345 (30%), Positives = 177/345 (51%), Gaps = 30/345 (8%)
Query: 8 VLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEP-------VVWQNIVWKSRVP 60
+++F++V +V + + LG+ I + V+ I+ P + IVW R P
Sbjct: 19 IMLFLAVVVVAGGMVTICLGTYKISMPEVYTIIATHLFSPDNVDSLNKLRNTIVWNIRFP 78
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVA-----SVILLSGSIGG 115
+ ITA+ G GLSV+G Q FRNPL P +LG+SSGA+ G A I +S +
Sbjct: 79 RVITAITVGIGLSVAGAIYQGCFRNPLVEPYILGVSSGAAFGAALGIVYPHIFISIQVSA 138
Query: 116 VALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVF 175
+ L +A T+A G V VTL++ G++IG + A + +
Sbjct: 139 FVFASLSVF--LAYTLARNRGQTPV--------------VTLVLAGIIIGSIFGACVSIM 182
Query: 176 KYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAK 235
KY S + +R V W +G F + N + L + +++I + + + LN+L +GD A+
Sbjct: 183 KYISDDTQLREIVFWMMGGFYYTTWNDVYLTVPVVLISVAIMWFFGWKLNVLSMGDEEAR 242
Query: 236 NLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAIL 295
LG+N + + I + ++TA+ + G + ++GL +PH R L++ D+R ++P A L
Sbjct: 243 ALGVNPEIFKFIFIVLATLVTAVCVSSVGIIAWVGLMMPHAAR-LIQGPDNRFVIPTAAL 301
Query: 296 TGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
G + C+ IAR +P+ IT+++GAP ++Y+L SK K
Sbjct: 302 MGGVYIIFCDTIARTLT-SAEIPIGIITSIVGAPYLIYLLRSKEK 345
>gi|116750166|ref|YP_846853.1| transport system permease protein [Syntrophobacter fumaroxidans
MPOB]
gi|116699230|gb|ABK18418.1| transport system permease protein [Syntrophobacter fumaroxidans
MPOB]
Length = 333
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 102/338 (30%), Positives = 182/338 (53%), Gaps = 19/338 (5%)
Query: 5 TVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSIT 64
+VL+ + ++ S V L L GS V ++ G + V +I+W+ R+P+ +
Sbjct: 13 SVLLCLVLAASTV----LGLFTGSTGQNPWEVLALITGRGDPDSVTASIIWRIRLPRVLL 68
Query: 65 ALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYI 124
A + GA LS+ GL QT+ RNP+A P VLGIS G+++G ILL LS+ +
Sbjct: 69 ASMIGATLSLGGLVFQTLLRNPIAEPYVLGISGGSAVGAILGILL-------GLSRFPGV 121
Query: 125 GEIALTIAATAGALSVMTLIVFVS--QKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEE 182
A AG++ + L+V +S Q +L++ GVM+ ++II + +
Sbjct: 122 ASFAF-----AGSMLTLLLVVSISSGQSSVRKDSLILAGVMVNAFCSSIIMFMVSLTRDS 176
Query: 183 DIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIK 242
+ + W +G + Q+ + +++ + FL ++NLLL+G+ A +G++++
Sbjct: 177 RLHNILFWLMGDLSITDQKQVLMLFGVLLPCFVVLFLFANSMNLLLMGEDMAAGMGVDVR 236
Query: 243 RARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLAL 302
L ++ + ++ + + G + F+GL +PHL R LL +DHRVL+PA + G++ +
Sbjct: 237 LISLALLGTTSLMVSATVCHSGLLGFVGLVIPHLLR-LLFGADHRVLIPACVFGGAAYLV 295
Query: 303 LCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
LC+L+AR G +PV +TA+IGAP+ +++L RK
Sbjct: 296 LCDLVARTLPAHGEIPVGVVTAMIGAPLFIFLLAKSRK 333
>gi|116190969|ref|ZP_01480704.1| hypothetical protein VchoM_02000104 [Vibrio cholerae MO10]
gi|153824754|ref|ZP_01977421.1| HmuU protein [Vibrio cholerae MZO-2]
gi|149741710|gb|EDM55739.1| HmuU protein [Vibrio cholerae MZO-2]
Length = 335
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 102/331 (30%), Positives = 188/331 (56%), Gaps = 8/331 (2%)
Query: 12 ISVSIVFFFFLNLVLGSVHIPLR-SVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGA 70
+++++ F ++ +G ++I + S+ +++ S + ++ R+P+++ L+ GA
Sbjct: 6 LTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLLCLLVGA 65
Query: 71 GLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALT 130
L++ G MQ +FRNPLA P ++G+SSGASLG A I+L + +S L ++ + L
Sbjct: 66 ILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDV----VSSLPWVNSLVLP 121
Query: 131 IAA-TAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFKYFSVEEDIRAYV 188
IAA GAL+ + + + K SVT++++ GV I +A A IG Y + ++ +R
Sbjct: 122 IAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRDLT 181
Query: 189 IWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYV 248
+W +GS A + + + L +I+L LN LLLG+ A++LG+ +++ + +
Sbjct: 182 LWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKREM 241
Query: 249 ISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIA 308
I S + + + G + F+GL VPH+ R +L DHR L+P + L G+ + L +++A
Sbjct: 242 ILLSAVGVGVAVSAAGMIGFVGLVVPHIGR-MLVGPDHRNLVPVSTLLGALMLTLADMVA 300
Query: 309 RMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
R+ LP+ +TAL+GAP +Y+LF ++
Sbjct: 301 RVAVAPAELPIGIVTALVGAPFFLYLLFQQK 331
>gi|150397540|ref|YP_001328007.1| transport system permease protein [Sinorhizobium medicae WSM419]
gi|150029055|gb|ABR61172.1| transport system permease protein [Sinorhizobium medicae WSM419]
Length = 371
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 105/345 (30%), Positives = 187/345 (54%), Gaps = 11/345 (3%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQN--IVWKSR 58
+ R ++VL ++V+ F ++ G+ L ++ + G A++ + ++ I+ R
Sbjct: 31 LARCLIVVLTLLAVAT---FMTSITTGAADASLANILRWLTGEADQAMSARDRIIILDIR 87
Query: 59 VPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVAL 118
+P+++ ++ GA L+VSG+ MQ +FRNPLA P ++G+SSGASLG +I+L G
Sbjct: 88 LPRAVLGMLVGASLAVSGVVMQGLFRNPLADPGLVGVSSGASLGAVLLIVLGDVAFGPLF 147
Query: 119 SKLGYIGEIALTIAATAGALSVMTLIVFVSQK--VKGSVTLLIIGVMIGYVANAIIGVFK 176
+ LG+ AL A G L+ L+ ++ + T+L+ G+ +G +A A+ GV
Sbjct: 148 AVLGFY---ALPFGAFLGGLATTLLLYRIATRGGQTSVATMLLAGIALGALAGAVTGVLV 204
Query: 177 YFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKN 236
+ + ++ +R WGLGS A + ++ I+++ L + L + LN + LG+ A +
Sbjct: 205 FIADDKQLRDLTFWGLGSLAGANWTKIAAAGPIILVSLAVVPFLARGLNAITLGEAAAYH 264
Query: 237 LGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILT 296
+G+ ++R + + T A G + F+G+ VPHL R L+ DHR L+PA+ L
Sbjct: 265 MGIPVQRLKNIAVFSVAGATGASVAVSGGIGFVGIVVPHLLR-LVIGPDHRYLLPASALL 323
Query: 297 GSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKN 341
G +L + +++AR LP+ ITA +GAP ++VL R N
Sbjct: 324 GGTLLIFADMLARTIVSPAELPIGIITAFVGAPFFLWVLLRGRSN 368
>gi|150398886|ref|YP_001322653.1| transport system permease protein [Methanococcus vannielii SB]
gi|150011589|gb|ABR54041.1| transport system permease protein [Methanococcus vannielii SB]
Length = 348
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 111/349 (31%), Positives = 194/349 (55%), Gaps = 20/349 (5%)
Query: 6 VLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITA 65
VLV+ F+ + I+ +F +++ GSV + + + V I+ R+ + I
Sbjct: 9 VLVVCFVLIGILSYF--SILEGSVPVSSNELKDYVLNGTTGNSGVDKIIKDLRLTRVIGC 66
Query: 66 LVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIG 125
+ GA +S+SGL MQ FRNPLA P +G+SSGA LG+A + S L +G
Sbjct: 67 FLVGAAVSISGLLMQGYFRNPLADPYFMGVSSGAGLGIAIYMFTS------VLLHIGISN 120
Query: 126 EIALTIA-ATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGY----VANAIIGVFKYFSV 180
I + I A G++ M L++ +S+KVK TLLI G+MI +++ I+ Y
Sbjct: 121 SILIRIVMAYIGSIITMLLVIGISKKVKQISTLLICGMMISGAVSGLSDVIVTTGNYIDT 180
Query: 181 E-EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLI-KTLNLLLLGDGYAKNLG 238
E I Y+ WG+GS ++ +Q+ + +++ + L+++L+ K+L+ L+G+ YA ++G
Sbjct: 181 EGSGISGYLTWGMGSVQSLTWDQLKVMAVVILPFIFLTYILLSKSLDANLIGESYAASVG 240
Query: 239 LNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGS 298
+++K+ + +I S ILT+ V A+ GP+ F+G+ P + RG+L TS H + P L G
Sbjct: 241 VDLKKFKRLLILLSCILTSTVVAFTGPISFIGIICPIIARGILNTSKHIYVFPITALLGI 300
Query: 299 SLALLCNLIARMPGF----EGALPVNSITALIGAPIVVYVLFSKRKNEM 343
+ + +++AR PG LP+++ +LIGAPI + + F R +++
Sbjct: 301 TFLIFADILAR-PGVLFTSTVPLPLHAPLSLIGAPISLLLFFKSRNHKI 348
>gi|88601501|ref|YP_501679.1| transport system permease protein [Methanospirillum hungatei JF-1]
gi|88186963|gb|ABD39960.1| transport system permease protein [Methanospirillum hungatei JF-1]
Length = 362
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 23/344 (6%)
Query: 6 VLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWN-----IVCGSAEEPVVWQNIVWKSRVP 60
VL L+ +S I+F + GS + L SV+ I G V I+W R+P
Sbjct: 30 VLFLLSVSFGILFLVGIAASFGSYELDLVSVYTTIFAGIFPGMGIPESVANTIIWDIRLP 89
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSK 120
+ A+V GA L V+G +Q V RNPLA P LGISS A++G + I IGG+ L
Sbjct: 90 RISMAIVCGASLGVAGAILQGVLRNPLAEPFTLGISSAAAMGASLAI-----IGGLKL-- 142
Query: 121 LGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV--TLLIIGVMIGYVANAIIGVFKYF 178
G ++ + A A + T++++ K KG +++ G+ I ++ +A+ +Y
Sbjct: 143 ---FGAYSVVLNAFISAF-LATMVIYSIAKSKGMTPEAIILAGIAIMFLLDAVTSFMQYL 198
Query: 179 SVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDG--YAKN 236
E ++A V W +GS + N T+FI I ++ + +L+ K +L ++G G A +
Sbjct: 199 GTAEQVQAVVFWMMGSVS--VANWETVFIVFCIAVIAIPYLIYKASDLTIIGAGDETAHS 256
Query: 237 LGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILT 296
LG+N++ R+ + + +LTA VTA+CG + F+GL PH+ R + D+R ++P + L
Sbjct: 257 LGINVEHVRMRTLIFAALLTASVTAFCGIIGFVGLVSPHITR-MAIGGDNRYVIPGSALV 315
Query: 297 GSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
G L L + +AR LPV +TAL+G P +++ KRK
Sbjct: 316 GGILLLGADTVARTILAPMILPVGIMTALVGVPFFMFLFMRKRK 359
>gi|38233234|ref|NP_939001.1| Iron-related transport system membrane protein [Corynebacterium
diphtheriae NCTC 13129]
gi|38199493|emb|CAE49144.1| Iron-related transport system membrane protein [Corynebacterium
diphtheriae]
Length = 350
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 172/316 (54%), Gaps = 16/316 (5%)
Query: 23 NLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTV 82
+L LG ++PLR + I+ + + N++W+ R+P+ + L+ GA L V+G MQ V
Sbjct: 38 SLALGQYYVPLRDLLTILT-QPDSSSLMHNVIWEIRLPRIVLGLLVGACLGVAGTLMQAV 96
Query: 83 FRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMT 142
F NPLA PS++G++SGA +G A+VI+ + +G +G + AA A+ V+T
Sbjct: 97 FANPLAEPSIIGVTSGAGVGAAAVIVFN----------VGILGTFTVPAAAFLSAV-VVT 145
Query: 143 LIVFVSQKVKGSVT---LLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVS 199
+I++ + +G V L++ G+ I V NA+I Y + + V W +GS
Sbjct: 146 VIIYQLARHQGKVAIVNLILTGIAINAVCNALISFLVYLAPTSNREEIVFWQMGSLNGAQ 205
Query: 200 GNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIV 259
+ + I ++ + +S + K L++L LG+ A + G+N+ R R+ I+ S ILTA
Sbjct: 206 WKHVWVVAPIALVGIVISSQIGKQLDVLALGERAAGHTGINVGRLRIIAIAASTILTAAA 265
Query: 260 TAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPV 319
++ G + F+GL VPHL R + ++R+L+PA+ L G+ L ++ AR LP+
Sbjct: 266 VSFAGLIGFVGLIVPHLLRS-ISGPENRLLLPASALAGAVLIACADVAARTMIPFADLPI 324
Query: 320 NSITALIGAPIVVYVL 335
TAL+G P +L
Sbjct: 325 GIFTALVGGPTFFVLL 340
>gi|56413673|ref|YP_150748.1| vtamin B12-transporter permease [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|59797651|sp|Q5PH87|BTUC_SALPA Vitamin B12 import system permease protein btuC
gi|56127930|gb|AAV77436.1| vitamin B12 transport system permease [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
Length = 326
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 96/291 (32%), Positives = 165/291 (56%), Gaps = 20/291 (6%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLG-VASVILLSGS 112
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G +A+V+L G
Sbjct: 52 VWQIRLPRTLAVLLVGAALALSGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQ 111
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAII 172
+ G AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 112 LAGWALG-----------LCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM 160
Query: 173 GVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLI---KTLNLLLL 229
YFS D+R + W +G F V Q ++MI L+P+ + + LN+L L
Sbjct: 161 TWAIYFSTSFDLRQLMYWMMGGFGGVDWQQS----WLMIALIPVLIWICCQSQPLNMLAL 216
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A+ LGL + R ++ +G + + A G + F+GL +PH+ R L +DHRVL
Sbjct: 217 GETSARQLGLPLWFWRNLLVVATGWMVGVSVAMAGAIGFIGLVIPHILR-LCGLTDHRVL 275
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+P L G+ LL +++AR+ LP+ +TA +GAP+ +++L +
Sbjct: 276 LPGCALAGAIALLLADVVARLALASAELPIGVVTATLGAPVFIWLLLKSAR 326
>gi|73669376|ref|YP_305391.1| iron(III) dicitrate transport system permease protein
[Methanosarcina barkeri str. Fusaro]
gi|72396538|gb|AAZ70811.1| iron(III) dicitrate transport system permease protein
[Methanosarcina barkeri str. Fusaro]
Length = 356
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 98/331 (29%), Positives = 173/331 (52%), Gaps = 9/331 (2%)
Query: 17 VFFFFLNLV----LGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGL 72
+ F F+ L+ +G+V IP V + G + W I+W R+PQ++ A+VAGAGL
Sbjct: 27 ILFLFIMLIYSISVGAVTIPPYEVLQTITGHSVS-TKWDLIIWNIRLPQALAAIVAGAGL 85
Query: 73 SVSGLQMQTVFRNPLAGPSVLGISSGASLGVA-SVILLSGSIGGVALSKLGYIGEIALTI 131
SV+G+ MQ++ RNP+A P LGIS+ + G A SV++L ++ I LT
Sbjct: 86 SVAGVAMQSILRNPIASPFTLGISNAGAFGAAVSVVVLGTGKMQSTVANAVTINNPYLTT 145
Query: 132 AATAGALSVMTLIVFVSQKVKGSV--TLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVI 189
+ T ++ + ++G+ +++ GV + + A +YF+ + + A V
Sbjct: 146 TVALFFCLLATGVILLISSIRGASPEVMVLAGVALSSLFTAGTAFLQYFADDTQLAAVVF 205
Query: 190 WGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVI 249
W G RV+ ++ + ++++ + N + GD AK LG+N++R RL +
Sbjct: 206 WTFGDVGRVTWTELEMMTGVVLLAIIFFIANCWNYNAIDAGDETAKGLGVNVERTRLVGM 265
Query: 250 SCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIAR 309
+ +++A++ A+ G + F+GL PH+ R ++ D R L+P + L G L L + AR
Sbjct: 266 VIAALVSAVIVAFLGVIGFIGLVCPHMVRRVI-GDDQRYLIPGSTLFGGILLLASDTAAR 324
Query: 310 MPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+ LPV+ +TA +GAP+ +Y+L K
Sbjct: 325 LIISPYVLPVSILTAFMGAPVFIYLLLKGYK 355
>gi|5006425|gb|AAD37494.1|AF109162_2 HmuU [Corynebacterium diphtheriae]
Length = 350
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 172/316 (54%), Gaps = 16/316 (5%)
Query: 23 NLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTV 82
+L LG ++PLR + I+ + + N++W+ R+P+ + L+ GA L V+G MQ V
Sbjct: 38 SLALGQYYVPLRDLLTILT-QPDSSSLMHNVIWEIRLPRIVLGLLVGACLGVAGTLMQAV 96
Query: 83 FRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMT 142
F NPLA PS++G++SGA +G A+VI+ + +G +G + A A+ V+T
Sbjct: 97 FANPLAEPSIIGVTSGAGVGAAAVIVFN----------VGILGTFTVPAARFLSAV-VVT 145
Query: 143 LIVFVSQKVKGSVT---LLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVS 199
+I++ + +G V L++ G+ I V NA+I Y + + V W +GS
Sbjct: 146 VIIYQLARHQGKVAIVNLILTGIAINAVCNALISFLVYLAPTSNREEIVFWQMGSLNGAQ 205
Query: 200 GNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIV 259
+ + I ++ + +S L+ K L++L LG+ A + G+N+ R R+ I+ S ILTA
Sbjct: 206 WKHVWVVAPIALVGIVISSLIGKQLDVLALGERAAGHTGINVGRLRVIAIAASTILTAAA 265
Query: 260 TAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPV 319
++ G + F+GL VPHL R + ++R+L+PA+ L G+ L ++ AR LP+
Sbjct: 266 VSFAGLIGFVGLIVPHLLRS-ISGPENRLLLPASALAGAVLIACADVAARTMIPFADLPI 324
Query: 320 NSITALIGAPIVVYVL 335
TAL+G P +L
Sbjct: 325 GIFTALVGGPTFFVLL 340
>gi|20977619|gb|AAM28271.1| BhuU [Bordetella avium]
gi|115424188|emb|CAJ50741.1| hemin ABC transporter, permease protein [Bordetella avium 197N]
Length = 334
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 111/337 (32%), Positives = 183/337 (54%), Gaps = 20/337 (5%)
Query: 8 VLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSA-EEPVVWQNIVWKSRVPQSITAL 66
VL +++++V L G+V IPL ++ ++ G E +W+NI+W R+P+ AL
Sbjct: 13 VLAGLALALVVVVCLATASGAVPIPLSALPRLLSGQGGAEDALWRNIIWDIRLPRVAFAL 72
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGE 126
VAGA L++ G MQ +FRNPLA P ++GIS G +LG + I+L GG AL+
Sbjct: 73 VAGAALAICGATMQALFRNPLAEPGLVGISLGGALGAVAAIVLGA--GGFALT------- 123
Query: 127 IALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRA 186
AA G+L + Q+V G LL+ G+ I V A+IG+ + + + +R
Sbjct: 124 ---ASAAFVGSLLATACAYVLGQRVPGVSGLLLAGIAINAVCGALIGLLTFLASDAQLRD 180
Query: 187 YVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLI---KTLNLLLLGDGYAKNLGLNIKR 243
W +GS A G + ++ +++ L L+ + LN LLLG+ A++LG + R
Sbjct: 181 LTFWNMGSLA---GARWSILMFLAPWTLCCCVWLMRQWRALNALLLGEREAQHLGFALSR 237
Query: 244 ARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALL 303
R +I + ++ + A G + F+GL VPHL R +L ++HR L+PA++L G+ L
Sbjct: 238 LRRKLILVTALVVGPLVAVTGGIGFVGLVVPHLVRMVL-GANHRWLLPASMLAGALALAL 296
Query: 304 CNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+ +AR+ LP+ +TAL+G P +++L R+
Sbjct: 297 ADWLARVVVVPAELPIGLVTALVGGPFFLWLLARGRR 333
>gi|118590143|ref|ZP_01547546.1| putative iron ABC transporter permease protein [Stappia aggregata
IAM 12614]
gi|118437115|gb|EAV43753.1| putative iron ABC transporter permease protein [Stappia aggregata
IAM 12614]
Length = 354
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 100/337 (29%), Positives = 180/337 (53%), Gaps = 11/337 (3%)
Query: 6 VLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITA 65
+LV+ + V++VF F +L LG PL V + + + + ++W R+P ++ A
Sbjct: 24 ILVICGLIVALVFSFSFDLALGPARYPLSEVLAALINPSGADLQTRVVLWDIRMPIALMA 83
Query: 66 LVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIG 125
+ GA LS++G QMQT+ NPLA P LGIS+ AS G A ++ +I A+ + +
Sbjct: 84 ISVGACLSLAGAQMQTILANPLASPFTLGISAAASFGAALGLVAGVAIFPAAVHYMVPLN 143
Query: 126 EIALTIAATAGALSVMTLIVFVSQKVKGSV--TLLIIGVMIGYVANAIIGVFKYFSVEED 183
+ +AA +L +++ V+G T++++G+ + + NA++ + +Y + E+
Sbjct: 144 AFLMAMAA--------SLFIYLMSTVRGVTVQTIVLLGIALVFTFNALLSLLEYLASEQA 195
Query: 184 IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKR 243
+ A V W +GS + + ++ I+I+ +P L L LGD A + G+NIK
Sbjct: 196 LAAVVFWTMGSLTKATWGKVFATFAILIVCIPFFARHSWALTALRLGDVKAASFGVNIKS 255
Query: 244 ARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALL 303
RL + +L AI ++ G + F+GL PH+ R +L D R +PAAIL G+ +
Sbjct: 256 LRLKTLLGVSLLAAIPVSFVGTIGFVGLVGPHIAR-MLVGEDQRFFLPAAILCGALMLSA 314
Query: 304 CNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
++++++ LP+ ITAL+G P ++F+ R+
Sbjct: 315 TSVVSKIILPGAILPIGVITALVGVPFFFVLIFADRR 351
>gi|16764691|ref|NP_460306.1| vtamin B12-transporter permease [Salmonella typhimurium LT2]
gi|20137381|sp|Q8ZPS8|BTUC_SALTY Vitamin B12 import system permease protein btuC
gi|16419859|gb|AAL20265.1| vitamin B12 transport protein [Salmonella typhimurium LT2]
Length = 326
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 96/291 (32%), Positives = 165/291 (56%), Gaps = 20/291 (6%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLG-VASVILLSGS 112
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G +A+V+L G
Sbjct: 52 VWQIRLPRTLAVLLVGAALALSGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQ 111
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAII 172
+ G AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 112 LPGWALG-----------LCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM 160
Query: 173 GVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLI---KTLNLLLL 229
YFS D+R + W +G F V Q ++MI L+P+ + + LN+L L
Sbjct: 161 TWAIYFSTSFDLRQLMYWMMGGFGGVDWQQS----WLMIALIPVLIWICCQSQPLNMLAL 216
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A+ LGL + R ++ +G + + A G + F+GL +PH+ R L +DHRVL
Sbjct: 217 GETSARQLGLPLWFWRNLLVVATGWMVGVSVAMAGAIGFIGLVIPHILR-LCGLTDHRVL 275
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+P L G+ LL +++AR+ LP+ +TA +GAP+ +++L +
Sbjct: 276 LPGCALAGAIALLLADVVARLALASAELPIGVVTATLGAPVFIWLLLKSAR 326
>gi|156744284|ref|YP_001434413.1| transport system permease protein [Roseiflexus castenholzii DSM
13941]
gi|156235612|gb|ABU60395.1| transport system permease protein [Roseiflexus castenholzii DSM
13941]
Length = 358
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 94/292 (32%), Positives = 161/292 (55%), Gaps = 13/292 (4%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLS 110
+ I W R+P+ + + GAGL+VSG +Q VFRNPLA P ++G+SSGA+LG +VI+L
Sbjct: 73 EAIFWTIRLPRVLLGTLVGAGLAVSGALLQGVFRNPLADPGLIGVSSGAALGAVAVIVLG 132
Query: 111 GSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGS--VTLLIIGVMIGYVA 168
+ +G + L +AA + +L+ ++Q+ + TLL++G+ + +A
Sbjct: 133 ----------ISSLGLMTLPLAAFLAGTATTSLVYRLAQRHGRTDVATLLLVGLALNALA 182
Query: 169 NAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLL 228
A G+ Y + + +R+ V W +G + + + + L L+ L + LNL
Sbjct: 183 GATTGLLTYLADDAQLRSIVFWTMGGLGGALWETLIVAAPWIGLSLVLAPRLGRALNLFA 242
Query: 229 LGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRV 288
LG+ A++LG+ +++ + VI + + T A GP+ F+GL VPH+ R L+ DHR+
Sbjct: 243 LGESEARHLGIEVEQVKRGVILLAALATGTSVALAGPIGFIGLIVPHIVR-LIAGPDHRL 301
Query: 289 LMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
L+PA L G++L +L +L+AR +PV ITA G P + ++ R+
Sbjct: 302 LLPACALGGANLLVLADLLARTMAAPAEIPVGLITAFAGGPFFLALILRARR 353
>gi|28210665|ref|NP_781609.1| putative iron(III) dicitrate transport system permease protein
fecD/hmuV [Clostridium tetani E88]
gi|28203103|gb|AAO35546.1| putative iron(III) dicitrate transport system permease protein
fecD/hmuV [Clostridium tetani E88]
Length = 355
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 97/287 (33%), Positives = 162/287 (56%), Gaps = 13/287 (4%)
Query: 52 NIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSG 111
NIV+K R+P+ + A+V+G L++ G+ MQT+ RN LA P +LGISSGAS +G
Sbjct: 69 NIVFKLRLPRLLLAIVSGGSLALVGILMQTLTRNSLADPYILGISSGAS---------AG 119
Query: 112 SIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVS--QKVKGSVTLLIIGVMIGYVAN 169
+ + L L G + + + A G++ L+ +S K L++ GV + +
Sbjct: 120 ATLSIVLGILASFGHLGVALGAFLGSMIASILVFKLSGINKAYSKTKLILTGVAVSCIFT 179
Query: 170 AIIGVFKYFSVEED-IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLL 228
AI F+ ++ +++ V W +GS A + NQ+ + IM+I +S LL K L+ +L
Sbjct: 180 AITNFVITFAKDDSLVKSAVFWTIGSLAGANYNQVKFALVIMVITTIISMLLYKDLDAML 239
Query: 229 LGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRV 288
LG+ AKN+G+N K +++ S ILT + A+ G + F+GL VPH+ R ++ +S H+
Sbjct: 240 LGEAVAKNIGINTKFIIRFIMFASTILTGTIVAFTGVIGFVGLIVPHVARQIVGSS-HKK 298
Query: 289 LMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
L+P I+ GS L ++ + IAR +P+ ITA +G P +Y++
Sbjct: 299 LIPFGIVIGSILLVVTDTIARTILSPQEVPIGVITAFLGGPFFLYLM 345
>gi|50841568|ref|YP_054795.1| ABC transporter [Propionibacterium acnes KPA171202]
gi|50839170|gb|AAT81837.1| ABC transporter [Propionibacterium acnes KPA171202]
Length = 340
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 110/351 (31%), Positives = 183/351 (52%), Gaps = 26/351 (7%)
Query: 6 VLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCG--------SAEEPVVWQNIVWKS 57
VL+L+F++V ++F L +GSV +P VW +V S E IV +
Sbjct: 2 VLILVFVTV-LLFVLGTALSIGSVQVPFTMVWKVVAHRVFPEGVISVEWTPAIDRIVADT 60
Query: 58 RVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVA 117
R+P+ + A VAG L+ G +Q + RNPLA P++LG+SSGA+ G +V+ IGG
Sbjct: 61 RLPRVLLAAVAGMALTTVGTVVQALLRNPLANPTILGVSSGAATGAIAVMRFGLLIGGT- 119
Query: 118 LSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV--TLLIIGVMIGYVANAIIGVF 175
++L +AA GA + L++ V+++ + TL++ G + + +A+
Sbjct: 120 ---------VSLGLAAFGGAFLTLLLVIMVARQRQTMTAGTLILTGTAVSALLSAVNNFM 170
Query: 176 KYFSVEEDIRAYVI-WGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYA 234
S + + + V+ W LG F + ++ I + L LN+LL G+ A
Sbjct: 171 VLTSPDPQLASQVLFWSLGGFGAAKWENLLFPSGVLAIGIILCLAQASNLNILLAGEESA 230
Query: 235 KNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAI 294
+LGLN+ R R ++ + + + + A CG V F+GL +PH+ R L +DHR ++P +
Sbjct: 231 GSLGLNVNRFRTWMFAVAAAIVGVTVAVCGVVGFIGLVMPHITR-LCVGADHRRILPIGL 289
Query: 295 LTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF---SKRKNE 342
L G+ +L +L ARM LPV +TAL+GAP +++L +RKN+
Sbjct: 290 LLGAIFTVLADLGARMVIRPQELPVGIVTALVGAPFFLFLLRRNGGRRKND 340
>gi|124521694|ref|ZP_01696561.1| transport system permease protein [Bacillus coagulans 36D1]
gi|124496604|gb|EAY44192.1| transport system permease protein [Bacillus coagulans 36D1]
Length = 357
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 104/344 (30%), Positives = 185/344 (53%), Gaps = 21/344 (6%)
Query: 8 VLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCG----------SAEEPVVWQNIVWKS 57
V+ + I F ++ +G+VHIP+ N++ E + NI+++
Sbjct: 16 VIFLLICMIAFSAIYSVSIGTVHIPIEKSMNVLLHVLTNGKMGHIKGMENSSYFNIIYQI 75
Query: 58 RVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVA 117
R+P+ I AL+ G GLS+ G+ MQ V +NPLA P ++GISSG +LG VIL+ G A
Sbjct: 76 RMPRVIFALLIGMGLSLCGIVMQAVVQNPLADPYIIGISSGGTLGATIVILIG--FGSNA 133
Query: 118 LSKLGYIGEIALTIAATAGALSVMTLIVFVSQ--KVKGSVTLLIIGVMIGYVANAIIGVF 175
L G ++ A GA++ ++ +S SV L++ GV++G + ++ +
Sbjct: 134 L-----FGTFSIAFGAFMGAMATSVAVLLLSSVGGKATSVKLVLSGVVVGALCSSFSSLV 188
Query: 176 KYFSVE-EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYA 234
YF+ E I+ W +GS A S ++ + +++I + + LN +LLGD A
Sbjct: 189 IYFANNAEGIKDVTFWTMGSLASASWEKVPVLSVVVLIGSLIFLFQHRVLNTMLLGDESA 248
Query: 235 KNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAI 294
LG+++ R + + ++T + AY G + F+GL +PH+CRG+ +DH+ L+PA I
Sbjct: 249 VTLGIHLSLFRKLYMVVTALITGTMVAYAGTIGFVGLIIPHICRGIF-GADHKQLLPATI 307
Query: 295 LTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSK 338
L+G + ++++R+ LP+ IT++IG+P+ +Y++ K
Sbjct: 308 LSGGLFLIWADILSRILIQNVELPIGIITSVIGSPLFIYMIVKK 351
>gi|50120774|ref|YP_049941.1| hemin transport system permease protein [Erwinia carotovora subsp.
atroseptica SCRI1043]
gi|49611300|emb|CAG74747.1| hemin transport system permease protein [Erwinia carotovora subsp.
atroseptica SCRI1043]
Length = 334
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 103/317 (32%), Positives = 174/317 (54%), Gaps = 18/317 (5%)
Query: 26 LGSVHIPLRSVWNIVCGSAEEPV--VWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVF 83
+G++ + L+ +W ++P+ +W NI RVP+ + A++ G L+ SG MQ +F
Sbjct: 28 MGALSLSLKMLWQT---PFDDPIWHIWLNI----RVPRVLLAILVGGALACSGAIMQGLF 80
Query: 84 RNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTL 143
RNPLA P +LGISSGA+L VA I+L + + AA AG+L++ +
Sbjct: 81 RNPLADPGLLGISSGAALCVALTIVLPLGLPPLLAL-------YGPMFAAFAGSLAITAI 133
Query: 144 IVFVSQKVKGSVT-LLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQ 202
I +S+ +G +T LL+ G+ + + A IGV Y S ++ +R + +WG+GS +
Sbjct: 134 IFILSRSEQGGLTRLLLAGIALNALCIAFIGVLTYLSTDQQLRQFSLWGMGSLGQAQWPM 193
Query: 203 MTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAY 262
+ + + I + + + LNLL LGD A LG+N+KR + ++ S +L + A
Sbjct: 194 LLVASTLTIPAMIATLYYARRLNLLQLGDEEAHYLGVNVKRTKYTLLLLSSLLVGVAVAV 253
Query: 263 CGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSI 322
G + F+GL +PHL R L +DHR L+P +IL G+ L L + +AR +PV +
Sbjct: 254 SGVIGFIGLIIPHLMRMHL-GADHRWLLPGSILGGACLLLFADTLARTLLSPAEMPVGLL 312
Query: 323 TALIGAPIVVYVLFSKR 339
++LIG P ++++ +
Sbjct: 313 SSLIGGPYFLWLIVQHK 329
>gi|16760554|ref|NP_456171.1| vtamin B12-transporter permease [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29141685|ref|NP_805027.1| vtamin B12-transporter permease [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
gi|20137368|sp|Q8Z6I5|BTUC_SALTI Vitamin B12 import system permease protein btuC
gi|25296922|pir||AC0705 vitamin B12 transport system permease STY1770 [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16502850|emb|CAD02012.1| vitamin B12 transport system permease [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29137313|gb|AAO68876.1| vitamin B12 transport system permease [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
Length = 326
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 96/291 (32%), Positives = 165/291 (56%), Gaps = 20/291 (6%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLG-VASVILLSGS 112
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G +A+V+L G
Sbjct: 52 VWQIRLPRTLAVLLVGAALALSGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQ 111
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAII 172
+ G AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 112 LPGWALG-----------LCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM 160
Query: 173 GVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLI---KTLNLLLL 229
YFS D+R + W +G F V Q ++MI L+P+ + + LN+L L
Sbjct: 161 TWAIYFSTSFDLRQLMYWMMGGFGGVDWQQS----WLMIALIPVLIWICCQSQPLNMLAL 216
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A+ LGL + R ++ +G + + A G + F+GL +PH+ R L +DHRVL
Sbjct: 217 GETSARQLGLPLWLWRNLLVIATGWMVGVSVAMAGAIGFIGLVIPHILR-LCGLTDHRVL 275
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+P L G+ LL +++AR+ LP+ +TA +GAP+ +++L +
Sbjct: 276 LPGCALAGAIALLLADVVARLALASAELPIGVVTATLGAPVFIWLLLKSAR 326
>gi|104783667|ref|YP_610165.1| ABC transporter, permease component [Pseudomonas entomophila L48]
gi|95112654|emb|CAK17382.1| putative ABC transporter, permease component [Pseudomonas]
Length = 345
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 106/351 (30%), Positives = 187/351 (53%), Gaps = 19/351 (5%)
Query: 1 MKRYTVLVLIFISVSIVFFF--FLNLVLGSVHIPL--------RSVWNIVCGSAEEPVVW 50
MK+ +FI ++++ +L+L LG V +PL R + + G E
Sbjct: 1 MKQRVAPRTLFICLTLLCLLAVWLSLALGPVSLPLLDTLRGGLRLMGLPLAGDGLEQA-- 58
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLS 110
+ I+ + R+P+++ L GA L++SG+ MQ +FRNPLA P ++G++SGA+LG A I+
Sbjct: 59 EMILGQIRLPRTLLGLAVGAVLALSGVAMQGLFRNPLADPGLVGVASGAALGAAVAIVGG 118
Query: 111 GSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQK--VKGSVTLLIIGVMIGYVA 168
+GG+ + L++ A G L V ++ + ++ T+L+ G+ + +
Sbjct: 119 SWLGGMP----EWFAPYLLSLCAFIGGLGVTAMVYRLGRRDGQTNVATMLLAGIAMTALG 174
Query: 169 NAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLL 228
+ +G+F Y + + +R W LGS S ++ + + ++ + LN LL
Sbjct: 175 GSAVGLFTYLADDATLRTLTFWNLGSLNGASYERLWPLLLVAALVALWLPRRAQALNALL 234
Query: 229 LGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRV 288
LG+ A++LG+ ++R + ++ C+ + A G + F+GL VPHL R L+ DHRV
Sbjct: 235 LGESEARHLGVEVERLKRELVFCTALGVGAAVAAAGLIGFIGLVVPHLVR-LVAGPDHRV 293
Query: 289 LMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
L+PA++L G +L L +LIAR+ LP+ +TA IGAP +++L R
Sbjct: 294 LLPASLLAGGTLLLFADLIARLALAPAELPIGIVTAFIGAPFFLFLLVKVR 344
>gi|15966183|ref|NP_386536.1| PUTATIVE HEMIN TRANSPORT SYSTEM PERMEASE TRANSMEMBRANE PROTEIN
[Sinorhizobium meliloti 1021]
gi|15075453|emb|CAC47009.1| PUTATIVE HEMIN TRANSPORT SYSTEM PERMEASE TRANSMEMBRANE PROTEIN
[Sinorhizobium meliloti]
Length = 366
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 100/326 (30%), Positives = 176/326 (53%), Gaps = 8/326 (2%)
Query: 20 FFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQN--IVWKSRVPQSITALVAGAGLSVSGL 77
F ++ G+ L S++ + G ++ + ++ I+ R+P+++ ++ GA L+VSG+
Sbjct: 42 FMTSITTGAADASLSSIFRWLSGETDQAMSARDRIIILDIRLPRAVLGMLVGASLAVSGV 101
Query: 78 QMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGA 137
MQ +FRNPLA P ++G+SSGASLG +I+L G + G+ AL A G
Sbjct: 102 VMQGLFRNPLADPGLVGVSSGASLGAVLLIVLGDVAFGPLFAVFGFY---ALPFGAFLGG 158
Query: 138 LSVMTLIVFVSQK--VKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSF 195
L+ L+ ++ + T+L+ G+ +G +A A+ GV + + ++ +R WGLGS
Sbjct: 159 LATTLLLYRIATRGGQTSVATMLLAGIALGALAGAVTGVLVFIADDKQLRDLTFWGLGSL 218
Query: 196 ARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGIL 255
A + ++ I+++ L + L + LN + LG+ A ++G+ ++R + +
Sbjct: 219 AGANWTKIAAAGPIILVSLAVVPFLARGLNAITLGEAAAYHMGVPVQRLKNIAVFSVAGA 278
Query: 256 TAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEG 315
T A G + F+G+ VPHL R L+ DHR L+PA+ L G +L + +++AR
Sbjct: 279 TGASVAVSGGIGFVGIVVPHLLR-LVIGPDHRYLLPASALLGGTLLIFADMLARTIVSPA 337
Query: 316 ALPVNSITALIGAPIVVYVLFSKRKN 341
LP+ ITA +GAP ++VL R N
Sbjct: 338 ELPIGIITAFVGAPFFLWVLLRGRSN 363
>gi|106893910|ref|ZP_01361033.1| transport system permease protein:inner-membrane translocator
[Clostridium sp. OhILAs]
gi|106774711|gb|EAT31272.1| transport system permease protein:inner-membrane translocator
[Clostridium sp. OhILAs]
Length = 342
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 114/340 (33%), Positives = 183/340 (53%), Gaps = 17/340 (5%)
Query: 3 RYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQS 62
+Y + V++ + +V F +++ +G+ I ++ V + E + +NI+WK RVP++
Sbjct: 15 KYKITVILVLVFMVVLSFLISVAMGAYKISVKEVLQAIFIDQEG--LSRNIIWKIRVPRT 72
Query: 63 ITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLG 122
+ A + G LS+SG +Q V RNPLA P+++G+SSGA L+ SI V
Sbjct: 73 LIAGIVGVCLSLSGGILQGVMRNPLASPNIIGVSSGAG--------LAASITLVLFPNYA 124
Query: 123 YIGEIALTIAATAGALSVMTLIVFVSQKVK-GSVTLLIIGVMIGYVANAIIGVFKYFSVE 181
Y+ LT AA GA + I +S K + +++ G+ I + AII F
Sbjct: 125 YL----LTPAAFIGAFATTLFIYMLSWKDGINPLRMILSGIAISSLIGAIINTILIF-YP 179
Query: 182 EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNI 241
+ ++ + + +GS A S L + L+ ++ K +N+L+LGD A +LGLNI
Sbjct: 180 DRVQNTLGFTIGSLAAKSWIHFRLMWPYALAGFILTLIMAKKINILMLGDEIASSLGLNI 239
Query: 242 KRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLA 301
+R R+ +I S +L A + G + F+GL VPH+ R L+ SD+R L PA+ L G+SL
Sbjct: 240 ERVRMILIIISSLLAASAVSVVGMLGFVGLVVPHITR-LIIGSDYRYLFPASALLGASLM 298
Query: 302 LLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKN 341
++C+ IAR LPV I A+IGAP +Y+L KN
Sbjct: 299 MICDTIARTVVEPIELPVGIIMAIIGAPFFLYLLRGGLKN 338
>gi|82777059|ref|YP_403408.1| vitamin B12 transport permease protein [Shigella dysenteriae Sd197]
gi|81241207|gb|ABB61917.1| vitamin B12 transport permease protein [Shigella dysenteriae Sd197]
Length = 326
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 163/283 (57%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 110 --------GQLLNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 162 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 220
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 221 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 279
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 280 ALAGASALLLADIVARLALAVAELPIGVVTATLGAPVFIWLLL 322
>gi|157085140|gb|ABV14818.1| hypothetical protein CKO_03742 [Citrobacter koseri ATCC BAA-895]
Length = 330
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 111/339 (32%), Positives = 185/339 (54%), Gaps = 15/339 (4%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVP 60
M R L L +++ + + G++ +PL +W+ G +W NI R+P
Sbjct: 1 MPRRITLSLYTLALMLAVVTVVASGFGALRLPLSLLWHD--GDDALRQIWFNI----RLP 54
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSK 120
+ + ALV G L++SG MQ +FRNPLA P +LGISSGA+L VA ++L L+
Sbjct: 55 RVLLALVIGGSLALSGCVMQGLFRNPLADPGLLGISSGAALAVALWVVLP-------LTL 107
Query: 121 LGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVT-LLIIGVMIGYVANAIIGVFKYFS 179
I A +AA GAL +I +S++ S++ LL++G+ I + A +GV + S
Sbjct: 108 PPLIMLYAPMLAAFIGALIATVVIFLLSRQRDSSLSRLLLVGIAINALCGAAVGVLSWIS 167
Query: 180 VEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGL 239
+ +R +WG+GS + + + +MI + L + L LNLL LG+ A LG+
Sbjct: 168 NDTQLRQLSLWGMGSLGQAQWSTLLAVASLMIPTVFLIWRLAGALNLLQLGEEEAHYLGV 227
Query: 240 NIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSS 299
+++ + ++ CS +L A A G + F+GL VPHL R L +DHR ++P ++L G+
Sbjct: 228 DVRVVQRILLICSALLVAAAVAVSGVIGFIGLVVPHLIRMWL-GADHRAVIPGSVLAGAF 286
Query: 300 LALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSK 338
L L+ + IAR +PV +T+++GAP ++++F +
Sbjct: 287 LLLIADTIARTLVAPAEMPVGLLTSILGAPWFLWLIFRR 325
>gi|21323155|dbj|BAB97783.1| ABC-type transporter, permease components [Corynebacterium
glutamicum ATCC 13032]
Length = 356
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 103/340 (30%), Positives = 188/340 (55%), Gaps = 18/340 (5%)
Query: 2 KRYTVLVLIFISVS--IVFFFFLNLVLGSVHIPLRSVWNIVC-GSAEEPVVWQNIVWKSR 58
KR TV +++F+++ ++ ++++G IP+R + I+ G + + +VW+ R
Sbjct: 20 KRRTVRIVLFVALGAIVIAASLWSILVGQYTIPIRDLPAILASGPTGAQTMAEQVVWQIR 79
Query: 59 VPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVAL 118
+P+ + L+ GA L V+G +Q VF NPLA PS++G++SGA +G A+VI+ +
Sbjct: 80 MPRIVLGLLVGAALGVAGALLQAVFSNPLAEPSIIGVTSGAGVGAAAVIVFN-------- 131
Query: 119 SKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV---TLLIIGVMIGYVANAIIGVF 175
L ++G + + A A+ + T++V+ + +G V L++ G+ I V+ A+ F
Sbjct: 132 --LTFLGTSTVAVGAFITAV-ITTILVYQLARSRGRVQVINLILTGIAINAVSGALTSFF 188
Query: 176 KYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAK 235
Y + + W +GS + + I+ I L +F L K L++L LG+ A
Sbjct: 189 IYIAPTSSREEIIFWQMGSLNGSQWAHVNVVFVIVTIGLVAAFGLGKQLDVLALGESAAG 248
Query: 236 NLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAIL 295
++GLN+K+ R+ I+ S +LTA AY G + F+GL +PHL R + ++ ++L+PA+ L
Sbjct: 249 HVGLNVKKLRIIAIAVSTLLTAGAVAYAGLISFVGLIIPHLLRTVTGPAN-KILVPASAL 307
Query: 296 TGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
G++L + +++AR LP+ TAL+G P +L
Sbjct: 308 GGAALISVSDILARTLIPYADLPIGIFTALVGGPTFFIML 347
>gi|11907952|gb|AAG41410.1|AF304009_3 permease [Corynebacterium ulcerans]
Length = 350
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 101/337 (29%), Positives = 186/337 (55%), Gaps = 17/337 (5%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
+R T+L ++ ++ V F +L LG ++PL+ + I+ +E + ++VW+ R+P+
Sbjct: 18 RRRTILFIVLAGLAFVAFV-TSLALGQYYVPLQDLPFILLNRGDESLT-TSVVWEIRLPR 75
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
+ + GA L V+G Q VF NPLA PS++G++SGA +G A+VI+ + +
Sbjct: 76 IVLGFLVGACLGVAGTLKQAVFANPLAEPSIIGVTSGAGVGAAAVIVFN----------I 125
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVT---LLIIGVMIGYVANAIIGVFKYF 178
G++G + +AA A+ ++T+I++ + +G V L++ G+ I V NA+I Y
Sbjct: 126 GFLGTFTVPVAAFMSAV-LVTVIIYQLARHQGKVAVVNLILTGIAINAVCNALISFLVYL 184
Query: 179 SVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLG 238
+ + V W +GS + + + I I + ++ L + L++L LG+ A + G
Sbjct: 185 APTANREQIVFWQMGSLNGSQWKHVWVVLPIAIAGVLIAIRLGRQLDVLALGERAAVHTG 244
Query: 239 LNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGS 298
+++ R R+ I+ S ILTA ++ G + F+GL VPHL R ++ ++++L+PA+ LTG+
Sbjct: 245 IHVSRLRIIAIAASTILTAGAVSFAGLIGFVGLIVPHLLRSIV-GPENKILLPASALTGA 303
Query: 299 SLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
L ++ AR LP+ TA++G P +L
Sbjct: 304 VLIAFADVAARTLIPFADLPIGIFTAIVGGPTFFVLL 340
>gi|62179929|ref|YP_216346.1| vtamin B12-transporter permease [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|75483705|sp|Q57PU6|BTUC_SALCH Vitamin B12 import system permease protein btuC
gi|62127562|gb|AAX65265.1| ABC superfamily (membrane), vitamin B12 transport protein
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 326
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 95/291 (32%), Positives = 164/291 (56%), Gaps = 20/291 (6%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLG-VASVILLSGS 112
VW+ R+P+++ L+ GA L++SG MQ +F NPL P +LG+S+GA +G +A+V+L G
Sbjct: 52 VWQIRLPRTLAVLLVGAALALSGAVMQALFENPLTEPGLLGVSNGAGVGLIAAVLLGQGQ 111
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAII 172
+ G AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 112 LPGWALG-----------LCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM 160
Query: 173 GVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLI---KTLNLLLL 229
YFS D+R + W +G F V Q ++MI L+P+ + + LN+L L
Sbjct: 161 TWAIYFSTSFDLRQLMYWMMGGFGGVDWQQS----WLMIALIPVLIWICCQSQPLNMLAL 216
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A+ LGL + R ++ +G + + A G + F+GL +PH+ R L +DHRVL
Sbjct: 217 GETSARQLGLPLWFWRNLLVIATGWMVGVSVAMAGAIGFIGLVIPHILR-LCGLTDHRVL 275
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+P L G+ LL +++AR+ LP+ +TA +GAP+ +++L +
Sbjct: 276 LPGCALAGAIALLLADVVARLALASAELPIGVVTATLGAPVFIWLLLKSAR 326
>gi|21228170|ref|NP_634092.1| Iron(III) dicitrate transport system permease protein
[Methanosarcina mazei Go1]
gi|20906618|gb|AAM31764.1| Iron(III) dicitrate transport system permease protein
[Methanosarcina mazei Go1]
Length = 356
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 105/335 (31%), Positives = 176/335 (52%), Gaps = 15/335 (4%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITAL 66
L+L+FI ++ +G+V IP V + G + W +I+W R+PQ++ A+
Sbjct: 27 LLLLFI------MLIYSISVGAVTIPPYEVLQTLMGQSVS-TKWDSIIWNIRLPQALAAI 79
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLG--VASVILLSGSIGGVALSKLGYI 124
VAGAGLSV+G+ MQ++ RNPL P LGIS+ + G V+ +IL +G + A +
Sbjct: 80 VAGAGLSVAGVVMQSILRNPLGSPFTLGISNAGAFGAAVSVIILGTGKMQSTAADAVIIN 139
Query: 125 GEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFKYFSVEED 183
TI A L +I+ +S+ S ++++ GV + + A +YF+ +
Sbjct: 140 NPYMTTIVAFIFCLLATGIILLISRIRAASPEVMVLAGVALSSLFTAGTMFLQYFADDTQ 199
Query: 184 IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIK--TLNLLLLGDGYAKNLGLNI 241
+ A V W G R N + I +++LL F +I N + GD AK LG+N+
Sbjct: 200 LAAVVFWTFGDVGR--ANWLEFKIMAVVVLLSTLFFMINRWDYNAIDAGDETAKGLGVNV 257
Query: 242 KRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLA 301
+R R+ + + +++A++ ++ G + F+GL PH+ R L+ D R L+P + L G L
Sbjct: 258 ERVRMVGMIVAALVSAVIVSFLGVIGFVGLICPHMVRRLI-GDDQRYLIPGSTLLGGILL 316
Query: 302 LLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L + AR+ LPV+ +TA +GAP +Y+L
Sbjct: 317 LASDTAARIIISPYVLPVSILTAFMGAPTFIYLLL 351
>gi|145294508|ref|YP_001137329.1| hypothetical protein cgR_0463 [Corynebacterium glutamicum R]
gi|140844428|dbj|BAF53427.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 358
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 103/340 (30%), Positives = 188/340 (55%), Gaps = 18/340 (5%)
Query: 2 KRYTVLVLIFISVS--IVFFFFLNLVLGSVHIPLRSVWNIV-CGSAEEPVVWQNIVWKSR 58
KR TV +++F+++ ++ ++++G IP+R + I+ G + + +VW+ R
Sbjct: 22 KRRTVRIVLFVALGAIVIAASLWSILVGQYTIPIRDLPAILNAGPTGAQTMAEQVVWQIR 81
Query: 59 VPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVAL 118
+P+ + L+ GA L V+G +Q VF NPLA PS++G++SGA +G A+VI+ +
Sbjct: 82 MPRIVLGLLVGAALGVAGALLQAVFSNPLAEPSIIGVTSGAGVGAAAVIVFN-------- 133
Query: 119 SKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV---TLLIIGVMIGYVANAIIGVF 175
L ++G + + A A+ + T++V+ + +G V L++ G+ I V+ A+ F
Sbjct: 134 --LTFLGTSTVAVGAFITAV-ITTILVYQLARSRGRVQVINLILTGIAINAVSGALTSFF 190
Query: 176 KYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAK 235
Y + + W +GS + + I+ I L +F L K L++L LG+ A
Sbjct: 191 IYIAPTSSREEIIFWQMGSLNGSQWAHVNVVFVIVTIGLVAAFGLGKQLDVLALGESAAG 250
Query: 236 NLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAIL 295
++GLN+K+ R+ I+ S +LTA AY G + F+GL +PHL R + ++ ++L+PA+ L
Sbjct: 251 HVGLNVKKLRIIAIAVSTLLTAGAVAYAGLISFVGLIIPHLLRTVTGPAN-KILVPASAL 309
Query: 296 TGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
G++L + +++AR LP+ TAL+G P +L
Sbjct: 310 GGAALISVSDILARTLIPYADLPIGIFTALVGGPTFFIML 349
>gi|73668706|ref|YP_304721.1| iron ABC transporter, permease protein [Methanosarcina barkeri str.
Fusaro]
gi|72395868|gb|AAZ70141.1| iron ABC transporter, permease protein [Methanosarcina barkeri str.
Fusaro]
Length = 356
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 104/345 (30%), Positives = 177/345 (51%), Gaps = 30/345 (8%)
Query: 8 VLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQN-------IVWKSRVP 60
++ F++ +V + + LG+ I V++I+ P + + IVW R P
Sbjct: 26 IIFFLAFVMVAGGMVTICLGTYQISFVEVYSIIATHIFSPNIVGSLDKLKNMIVWNIRFP 85
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVA-----SVILLSGSIGG 115
+ I A+ G GLSV+G Q FRNPL P +LG+SSGA+ G A I LS +G
Sbjct: 86 RVIMAITVGIGLSVAGAVYQGCFRNPLVEPYILGVSSGAAFGAALGIVYPQIFLSIQLGA 145
Query: 116 VALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVF 175
+ L +A T+A + G V VTL++ G++IG + +A + +
Sbjct: 146 FLFALLSVF--LAYTLARSRGQTPV--------------VTLVLAGIIIGSIFSAFVSIM 189
Query: 176 KYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAK 235
KY S + +R V W +G F + + L + +++I + + + LN+L +GD A+
Sbjct: 190 KYLSNDTQLREIVFWMMGGFYYTQWDDVKLTVPVVLISVAIMWFFGWKLNVLSMGDEEAR 249
Query: 236 NLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAIL 295
LG+N + + I + ++TA+ + G V ++GL +PH R L++ D+R ++P A L
Sbjct: 250 ALGVNPEVFKFIFIVLATLVTAVCVSSVGIVAWVGLMMPHAAR-LIQGPDNRFVIPTAAL 308
Query: 296 TGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
G + C+ +AR +P+ ITA++GAP ++Y+L SK K
Sbjct: 309 MGGVYIIFCDTLARTLT-SAEIPIGIITAIVGAPYLLYLLRSKEK 352
>gi|148657668|ref|YP_001277873.1| transport system permease protein [Roseiflexus sp. RS-1]
gi|148569778|gb|ABQ91923.1| transport system permease protein [Roseiflexus sp. RS-1]
Length = 354
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 94/292 (32%), Positives = 158/292 (54%), Gaps = 13/292 (4%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLS 110
+ I W R+P+ ++AGA L+VSG +Q VFRNPLA P ++G+SSGA+LG +VI+L
Sbjct: 69 EAIFWTIRLPRVALGVLAGAALAVSGALLQGVFRNPLADPGLIGVSSGAALGAVAVIVLG 128
Query: 111 GSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGS--VTLLIIGVMIGYVA 168
+ +G + L +AA + + ++Q+ + TLL++G+ + +A
Sbjct: 129 ----------ISSLGLMTLPLAAFLTGTATTFFVYRLAQRHGRTDVATLLLVGLALNAMA 178
Query: 169 NAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLL 228
A G+ Y + + +R+ V W +G + + + + L L+ L + LNL
Sbjct: 179 GAATGLLTYLADDAQLRSIVFWTMGGLGGALWETVLVAAPWIAVSLALAPRLGRALNLFA 238
Query: 229 LGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRV 288
LG+ A++LG+ +++ + I S + T A GP+ F+GL VPH+ R L+ DHR+
Sbjct: 239 LGETEARHLGIEVEQVKRAAILLSALATGTAVALVGPIGFIGLIVPHIVR-LIAGPDHRL 297
Query: 289 LMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
L+PA L G+SL +L +L+AR +PV ITA G P + ++ R+
Sbjct: 298 LLPACALGGASLLVLADLVARTMAAPAEVPVGLITACAGGPFFLALILRARR 349
>gi|19551636|ref|NP_599638.1| ABC-type transporter, permease component [Corynebacterium
glutamicum ATCC 13032]
gi|62389289|ref|YP_224691.1| cobalamin/Fe3+-siderophores transport systems, permease component
[Corynebacterium glutamicum ATCC 13032]
gi|41324623|emb|CAF19105.1| cobalamin/Fe3+-siderophores transport systems, permease component
[Corynebacterium glutamicum ATCC 13032]
Length = 358
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 103/340 (30%), Positives = 188/340 (55%), Gaps = 18/340 (5%)
Query: 2 KRYTVLVLIFISVS--IVFFFFLNLVLGSVHIPLRSVWNIVC-GSAEEPVVWQNIVWKSR 58
KR TV +++F+++ ++ ++++G IP+R + I+ G + + +VW+ R
Sbjct: 22 KRRTVRIVLFVALGAIVIAASLWSILVGQYTIPIRDLPAILASGPTGAQTMAEQVVWQIR 81
Query: 59 VPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVAL 118
+P+ + L+ GA L V+G +Q VF NPLA PS++G++SGA +G A+VI+ +
Sbjct: 82 MPRIVLGLLVGAALGVAGALLQAVFSNPLAEPSIIGVTSGAGVGAAAVIVFN-------- 133
Query: 119 SKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV---TLLIIGVMIGYVANAIIGVF 175
L ++G + + A A+ + T++V+ + +G V L++ G+ I V+ A+ F
Sbjct: 134 --LTFLGTSTVAVGAFITAV-ITTILVYQLARSRGRVQVINLILTGIAINAVSGALTSFF 190
Query: 176 KYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAK 235
Y + + W +GS + + I+ I L +F L K L++L LG+ A
Sbjct: 191 IYIAPTSSREEIIFWQMGSLNGSQWAHVNVVFVIVTIGLVAAFGLGKQLDVLALGESAAG 250
Query: 236 NLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAIL 295
++GLN+K+ R+ I+ S +LTA AY G + F+GL +PHL R + ++ ++L+PA+ L
Sbjct: 251 HVGLNVKKLRIIAIAVSTLLTAGAVAYAGLISFVGLIIPHLLRTVTGPAN-KILVPASAL 309
Query: 296 TGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
G++L + +++AR LP+ TAL+G P +L
Sbjct: 310 GGAALISVSDILARTLIPYADLPIGIFTALVGGPTFFIML 349
>gi|84705172|ref|ZP_01018595.1| hemin ABC transporter permease protein [Parvularcula bermudensis
HTCC2503]
gi|84689272|gb|EAQ15115.1| hemin ABC transporter permease protein [Parvularcula bermudensis
HTCC2503]
Length = 337
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 112/338 (33%), Positives = 179/338 (52%), Gaps = 10/338 (2%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITAL 66
+V++ V + F L ++LG + + L V I+ GS V +V R+P+ +
Sbjct: 1 MVVLSCGVLALVFGVLGILLGPLKVSLPDVLAILTGSDIAGQVKTGVVLNIRLPRMVLGF 60
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLG-YIG 125
GA L VSG MQ FRNPLA P+++G+S+G +L +VI+L GG LS L +G
Sbjct: 61 AVGASLGVSGAAMQGFFRNPLADPALIGVSAGGALAAVAVIVL----GGAVLSGLTEALG 116
Query: 126 EIALTIAATAGALSVMTLIVFVSQKVKGSV---TLLIIGVMIGYVANAIIGVFKYFSVEE 182
AL +AA G+L ++ LI ++ + +G V T+L+ GV +A + IG + + +
Sbjct: 117 SFALPVAAFFGSLVIVFLIYRLAMQ-EGRVIVATMLLAGVAANSLAVSGIGYLTFLADDT 175
Query: 183 DIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIK 242
+R W LGS + ++ I +M I + L + LN LL G+ A LG N++
Sbjct: 176 QLRDLTFWTLGSLGGATWDRAVPAIALMAIGVAGILTLARPLNSLLFGEADAAALGTNVE 235
Query: 243 RARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLAL 302
R + C+ + TA CG + F+GL VPHL R L+ DHR ++P + L G L L
Sbjct: 236 RTKRLAALCTALSVGAATAVCGVIGFVGLVVPHLVR-LVTGPDHRFVLPGSALLGGVLVL 294
Query: 303 LCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+L+AR+ LP+ +T+++GAP ++L +K
Sbjct: 295 GADLVARLAVSPAELPLGVVTSVLGAPFFFWLLLRDKK 332
>gi|116253439|ref|YP_769277.1| transmembrane permease component of haem ABC transporter [Rhizobium
leguminosarum bv. viciae 3841]
gi|115258087|emb|CAK09188.1| transmembrane permease component of haem ABC transporter [Rhizobium
leguminosarum bv. viciae 3841]
Length = 370
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 97/290 (33%), Positives = 159/290 (54%), Gaps = 8/290 (2%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
I++ R+P++I + GA L+VSG MQ +FRNPLA P ++G+SSGASLG ++I+L G
Sbjct: 81 IIFDIRLPRAILGFLIGASLAVSGTVMQGLFRNPLADPGLVGVSSGASLGAVAMIVLGG- 139
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV---TLLIIGVMIGYVAN 169
G+A +G AL AA G L V TL+++ G T+L+ G+ +G +A
Sbjct: 140 --GLAAPLEALLGIYALPAAAFGGGL-VTTLLLYRIATRHGQTSVATMLLAGIALGALAL 196
Query: 170 AIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLL 229
AI G+ Y + ++ +R W +GS A + ++ I+++ + + LN + L
Sbjct: 197 AITGLLIYMANDQQLRDLTFWSMGSLAGATWTKIAAASPIILLSFTALPFMARGLNAITL 256
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A ++G+ ++R + I T A G + F+G+ VPH+ R + DHR L
Sbjct: 257 GEAAAFHMGVPVQRLKNVAIVGVAAATGASVAVSGGIGFVGIVVPHILR-MAIGPDHRFL 315
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+PAA L G SL + +++AR LP+ ITA +G P +++L +R
Sbjct: 316 LPAAALLGGSLLIFADVLARTLVAPAELPIGIITAAVGGPFFLWILLRQR 365
>gi|121542625|ref|ZP_01674346.1| ABC-type Fe3+-siderophore transport system, permease component
[Candidatus Desulfococcus oleovorans Hxd3]
gi|121517451|gb|EAX54338.1| ABC-type Fe3+-siderophore transport system, permease component
[Candidatus Desulfococcus oleovorans Hxd3]
Length = 337
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 97/289 (33%), Positives = 160/289 (55%), Gaps = 15/289 (5%)
Query: 49 VWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVIL 108
V I+W+ R+P+ + A + GA LS GL Q + RNPLA P +LGIS GA++G IL
Sbjct: 56 VLTTIIWRIRLPRVLLAALVGASLSAGGLVFQALLRNPLAEPYILGISGGAAVGAIIGIL 115
Query: 109 LSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVS--QKVKGSVTLLIIGVMIGY 166
L G ++IAA G+ + + LI+F++ + + + +LL+ GVMI
Sbjct: 116 L------------GLSPFPGVSIAAFIGSGACLLLILFMATGRTILKNESLLLSGVMINA 163
Query: 167 VANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNL 226
+AII + + I + W +G + V Q+ + ++I + F LNL
Sbjct: 164 FCSAIIMFLIAITQDARIHNIMFWLMGDLSMVGLKQVAILAALVIPCFIVVFRYANILNL 223
Query: 227 LLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDH 286
+LLG A+ +G+NI+ A ++ + + + + CG + F+GL VPH R L+ +DH
Sbjct: 224 ILLGREMAQTMGVNIRVAGAVLLVVTSFMVSATVSQCGLLGFVGLVVPHFFRRLI-GADH 282
Query: 287 RVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
R+L+PA +L G + +LC+++AR G +PV ITA++GAP+ +Y+L
Sbjct: 283 RLLVPACLLGGGAYMVLCDMLARTLPAHGEMPVGVITAILGAPLFIYLL 331
>gi|124530855|ref|ZP_01701360.1| transport system permease protein [Escherichia coli B]
gi|124498958|gb|EAY46457.1| transport system permease protein [Escherichia coli B]
gi|157066852|gb|ABV06107.1| vitamin B12 import system permease protein btuC [Escherichia coli
HS]
Length = 326
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 94/287 (32%), Positives = 165/287 (57%), Gaps = 12/287 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 110 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 162 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 220
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 221 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 279
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
L G+S LL +++AR+ LP+ +TA +GAP+ +++L R+
Sbjct: 280 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKARR 326
>gi|76796307|ref|ZP_00778672.1| transport system permease protein [Thermoanaerobacter ethanolicus
ATCC 33223]
gi|114845489|ref|ZP_01455888.1| transport system permease protein [Thermoanaerobacter ethanolicus
X514]
gi|76588344|gb|EAO64751.1| transport system permease protein [Thermoanaerobacter ethanolicus
ATCC 33223]
gi|114804492|gb|EAU56334.1| transport system permease protein [Thermoanaerobacter ethanolicus
X514]
Length = 354
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 102/332 (30%), Positives = 178/332 (53%), Gaps = 6/332 (1%)
Query: 6 VLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITA 65
+L++ +++ + + GS I V + G EE ++ IVW R+P+ +TA
Sbjct: 21 ILIIFLTALATLVLAVYAINAGSAGISTYDVIKTLLGKGEER--FRIIVWNIRMPRVLTA 78
Query: 66 LVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIG 125
+VAG GLSV+G Q++ RNPLA P LGIS GA+ G A I++ G+ G A S I
Sbjct: 79 IVAGIGLSVAGCVTQSILRNPLASPFTLGISQGAAFGAAVAIIVFGA-GSTANSDSVIIN 137
Query: 126 EIALTI-AATAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFKYFSVEED 183
L + A G++ +++ +++ + + +++ GV +G + +A+ + +YF+ +
Sbjct: 138 NPYLVVFFAFLGSMGSTIVVLMLAKSFRVTPEAMVLAGVALGSLFSAVTMILQYFADDVK 197
Query: 184 IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKR 243
+ + V W G R S + + ++ I L N L G+ AK LG++++R
Sbjct: 198 VASVVFWTFGDIGRASWKDLGIMSVVVGISLIYFMFNRWNYNALDSGEETAKGLGVDVER 257
Query: 244 ARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALL 303
RL + S ++ A++T++ G + F+GL PH+ R L+ DHR L+PA+ + G + L
Sbjct: 258 VRLLGMFVSSLIAAVITSFVGIIGFIGLVGPHIMRRLI-GGDHRFLIPASSVMGGLILLA 316
Query: 304 CNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
+ + R LPV +IT+ +GAPI +YVL
Sbjct: 317 SDTLGRTIISPVVLPVGAITSFLGAPIFLYVL 348
>gi|37526526|ref|NP_929870.1| hypothetical protein plu2635 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785957|emb|CAE15009.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 333
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 108/316 (34%), Positives = 177/316 (56%), Gaps = 18/316 (5%)
Query: 26 LGSVHIPLRSVWNIVCGSAEEPV--VWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVF 83
LG++ + +++W S EP +W NI R+P+ + A++ G L+ SG MQ +F
Sbjct: 28 LGALSLSFKTLWE---SSISEPQWQIWLNI----RLPRVLLAILVGCALATSGAVMQGLF 80
Query: 84 RNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTL 143
RNPLA P +LGISSGA+L VA I+L S+ V ++ G+I IAA G+L + L
Sbjct: 81 RNPLADPGLLGISSGAALMVAMAIVLPVSLPSV-ITVYGHI------IAAFIGSLLISLL 133
Query: 144 IVFVSQKVKGSVT-LLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQ 202
I +++ G++ LL+ G+ I + + IG+ Y S ++ +R + +W +GS +++
Sbjct: 134 IFSLNKYNYGNLARLLLAGIAINALCMSAIGLLSYISDDQQLRQFSLWMMGSLSQIEWPT 193
Query: 203 MTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAY 262
+ + ++I + L+F + LNLL LGD A LG+N++R + ++ S +L A
Sbjct: 194 LAITASLIIPTIILTFSQARKLNLLQLGDEEAHYLGINVQRTKFQLLLLSALLIGSAVAL 253
Query: 263 CGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSI 322
G + F+GL VPHL R + DH L+P A L G+SL L + +AR +PV I
Sbjct: 254 SGVIGFIGLVVPHLIR-MRFGGDHNWLLPGAALGGASLLLTADTLARTLVSPAEIPVGLI 312
Query: 323 TALIGAPIVVYVLFSK 338
T LIG P ++++ +
Sbjct: 313 TGLIGGPYFLWLILKQ 328
>gi|149910542|ref|ZP_01899181.1| vtamin B12-transporter permease [Moritella sp. PE36]
gi|149806385|gb|EDM66358.1| vtamin B12-transporter permease [Moritella sp. PE36]
Length = 339
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 114/336 (33%), Positives = 182/336 (54%), Gaps = 22/336 (6%)
Query: 9 LIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVA 68
LI +S+ +V F++L G+ I + + N + + Q ++++ R P+ ITA++
Sbjct: 19 LILLSIFLVAVTFISLASGNFSIGVDDLVNGLSP------LQQQVLFELRFPRIITAILV 72
Query: 69 GAGLSVSGLQMQTVFRNPLAGPSVLGISSGASL-GVASVILLSGSIGGVALSKLGYIGEI 127
GA L+V+G +Q + N LA P V+GISS ASL V S++ L + +
Sbjct: 73 GAALAVAGCILQVLLANSLAEPGVIGISSFASLFAVLSIVFLD-----TLFPQWAGLQHY 127
Query: 128 ALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAY 187
L ++A GA V L+ V++ + +L++GV IG + AI+ YFS + +R
Sbjct: 128 ILPLSAFIGASLVTYLLYQVTKNNLPTTKILLLGVAIGIFSGAIMTWLLYFSDDSSMRQM 187
Query: 188 VIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLI----KTLNLLLLGDGYAKNLGLNIKR 243
+ W +G+ A + IYI +I L LSF+ I LNLL G+ A G+++ +
Sbjct: 188 LYWMMGNLAYGAD-----LIYIAVIPLSLSFIWIMGRIDALNLLQFGEQGAFQSGIDVPK 242
Query: 244 ARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALL 303
R+ +I C +LT I + G + F+GL +PH+ R +L TS R L+PA+ L G+S LL
Sbjct: 243 LRIQLILCVAVLTGISVSMAGVISFIGLVIPHILR-ILVTSQLRFLVPASALLGASFLLL 301
Query: 304 CNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+LIAR LPV +ITA +GAP +Y+L K+
Sbjct: 302 ADLIARSAFATAELPVGAITASLGAPFFIYLLLRKQ 337
>gi|20089829|ref|NP_615904.1| hemin permease [Methanosarcina acetivorans C2A]
gi|19914774|gb|AAM04384.1| hemin permease [Methanosarcina acetivorans C2A]
Length = 356
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 103/334 (30%), Positives = 176/334 (52%), Gaps = 10/334 (2%)
Query: 8 VLIFISVSIVFFFFL-NLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITAL 66
+ I V ++F F+ ++ +G+V IP V + G W I+W R+PQ++ A+
Sbjct: 21 IYILGGVILLFLMFIYSISVGAVSIPPYEVLKTLMGQ-NVSTKWDAIIWNIRLPQALAAI 79
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVA-SVILLSGSIGGVALSKLGYIG 125
VAG GLS++G+ MQ++ RNPL P LGIS+ + G A SVI+L ++ I
Sbjct: 80 VAGIGLSITGVVMQSILRNPLGSPFTLGISNAGAFGAAVSVIILGTGKMQSTVANAVTIN 139
Query: 126 EIALTIAATAGALSVMTLIVFVSQKVKGSV--TLLIIGVMIGYVANAIIGVFKYFSVEED 183
LT + T I+ + +++GS +++ GV + + A +YF+ +
Sbjct: 140 NPYLTTMTAFFFCLLATGIILIISRIRGSSPEVMVLAGVALSSLFTAGTMFLQYFADDTQ 199
Query: 184 IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIK--TLNLLLLGDGYAKNLGLNI 241
+ A V W G R + N++ I I+LL + F I N + GD AK LG+++
Sbjct: 200 LAAVVFWTFGDVGRANWNELA--IMTGIVLLAILFFAINRWNYNAIDAGDETAKGLGVDV 257
Query: 242 KRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLA 301
++ RL + + +++A++ A+ G + F+GL PH+ R L+ D R L+P + + G L
Sbjct: 258 EKIRLIGMVVAALVSAVIVAFLGVIGFVGLICPHMVRRLI-GDDQRYLIPGSAVMGGLLL 316
Query: 302 LLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
L+ + AR+ LPV+ +TA +GAP +Y+L
Sbjct: 317 LISDTAARLIIAPYVLPVSVLTAFMGAPTFIYLL 350
>gi|118050350|ref|ZP_01518900.1| transport system permease protein [Comamonas testosteroni KF-1]
gi|118002436|gb|EAV16590.1| transport system permease protein [Comamonas testosteroni KF-1]
Length = 361
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 106/351 (30%), Positives = 177/351 (50%), Gaps = 26/351 (7%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVC-----------GSAEEPVVWQNIVW 55
L L ++ ++ L + LG V I W I S IVW
Sbjct: 18 LWLAMLTAVLLLSLTLAITLGPVRIAPGQAWQITAYELGQRLGLDWPSGSWSSAQYQIVW 77
Query: 56 KSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGG 115
+ R+P+ + A + GAGL++ G+ MQ + RNPLA P +LG+SSGAS+G SV+
Sbjct: 78 RVRLPRVLLAALTGAGLALVGVAMQAMVRNPLADPYLLGVSSGASVGAVSVL-------- 129
Query: 116 VALSKLGYIGEIALTIAATAGALSVMTLIVFVSQ---KVKGSVTLLIIGVMIGYVANAII 172
A L + GE+AL + A +GAL + F++ +++ S L++ GV I Y +
Sbjct: 130 -AFGALAFAGELALPLGAFSGALLACVAVYFLAHANGRLQAS-RLILGGVAIAYCLGGVT 187
Query: 173 GVFKYFSVEEDIRAYVI-WGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGD 231
+ + + ++ V+ W LGS A ++ L ++ + L ++LN LL G+
Sbjct: 188 SLIVLTADQRELANSVLTWTLGSLAGTRWQELGLPAALLAAGVALMLTQARSLNALLAGE 247
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
A LG++ R R ++ ++T ++ A GP+ F+GL VPH+ R +L S+HR ++P
Sbjct: 248 ETAATLGVDTTRTRRWLFVLVSMVTGVLVALTGPIGFVGLIVPHVAR-MLVGSEHRRVLP 306
Query: 292 AAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKNE 342
A LTG+ + ++ +R+ +PV IT+L+G P V++L K E
Sbjct: 307 VAALTGAIFLIWVDVFSRISFAPAEVPVGVITSLLGGPFFVWMLCRKSVRE 357
>gi|29827142|ref|NP_821776.1| ABC transporter iron(III)/siderophore permease protein
[Streptomyces avermitilis MA-4680]
gi|15824224|dbj|BAB69382.1| hemin ABC transport protein [Streptomyces avermitilis]
gi|29604240|dbj|BAC68311.1| putative ABC transporter iron(III)/siderophore permease protein
[Streptomyces avermitilis MA-4680]
Length = 323
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 110/318 (34%), Positives = 169/318 (53%), Gaps = 17/318 (5%)
Query: 26 LGSVHIPLRSVWNIVC------GSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQM 79
+G+V+IP+ VW I+ G+A +P + Q IVW R P+ A + GAGL+V+G +
Sbjct: 6 IGAVNIPVADVWGILLHHVTGRGAAGDPALDQ-IVWTFRAPRVALAALVGAGLAVAGAVL 64
Query: 80 QTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALS 139
QT+ NPLA P VLG S GASLG VI L G G + ++ AA GAL+
Sbjct: 65 QTLVSNPLADPVVLGFSYGASLGAVLVITLGGVALGGLAG-------LGVSGAAFVGALA 117
Query: 140 VMTLIVFVSQKVK--GSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFAR 197
L+ + Q+ L++ GV +GYV ++ + + ++R + W LGS A
Sbjct: 118 AGALVFALGQRQGRLAPTRLVLAGVAVGYVLLSVTSFVQLLATPTELRTVMFWMLGSVAG 177
Query: 198 VSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTA 257
+Q+ +++ + L + LN LL GD A LG+++ R R ++ S +LT
Sbjct: 178 AQWSQLPTVTAVVLTSTVVLTLFGRRLNALLAGDESATALGVDVNRLRAVLLVISALLTG 237
Query: 258 IVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGAL 317
V A G V F+GL +PHL R L +DHR L+P L G+ +L +L++R L
Sbjct: 238 TVIAVAGGVGFVGLMIPHLVR-LTTGADHRRLLPLTALLGAVYLVLVDLLSRTVNRPNEL 296
Query: 318 PVNSITALIGAPIVVYVL 335
P+ +TAL+GAP +++L
Sbjct: 297 PLGILTALLGAPFFLWLL 314
>gi|109646556|ref|ZP_01370460.1| transport system permease protein [Desulfitobacterium hafniense
DCB-2]
gi|109641802|gb|EAT51356.1| transport system permease protein [Desulfitobacterium hafniense
DCB-2]
Length = 341
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 97/291 (33%), Positives = 159/291 (54%), Gaps = 18/291 (6%)
Query: 52 NIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSG 111
++V++ R+P+ AL+ GAGLS+SG Q +F+NPL P +LG+SSGA +G A IL
Sbjct: 62 DVVFQVRLPRVFAALLVGAGLSISGTTYQGIFKNPLVSPDLLGVSSGACVGAALAILNGL 121
Query: 112 SIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLII--GVMIGYVAN 169
GG+ I A G L + + + + ++ S L+++ G+++ +
Sbjct: 122 DAGGI-------------QICALLGGLLAVAITTTIPKLLRNSSNLILVLAGIIVAGFMS 168
Query: 170 AIIGVFKYFS-VEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLL 228
+ +G+ KY + E + V W +GS A S + + + M+I + L + +N+L
Sbjct: 169 SALGLLKYVADPETQLPEIVFWQMGSLATTSMGDVMMIVPAMLISMALLIAVRWRINILS 228
Query: 229 LGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRV 288
LGD A +LG+NI+ R I CS I TA G V ++GL VPHLCR L+ + RV
Sbjct: 229 LGDEEAGSLGINIRVIRGLAIVCSTITTACAVCISGTVGWIGLVVPHLCRMLVGPDNTRV 288
Query: 289 LMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+ P +I G+S L+ + +AR G +P++ +T IGAP+ ++LF +R
Sbjct: 289 I-PLSIFVGASFMLVVDTVARTVT-SGEIPLSILTGFIGAPLYGWLLFKQR 337
>gi|88601560|ref|YP_501738.1| transport system permease protein [Methanospirillum hungatei JF-1]
gi|88187022|gb|ABD40019.1| transport system permease protein [Methanospirillum hungatei JF-1]
Length = 359
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 167/295 (56%), Gaps = 6/295 (2%)
Query: 50 WQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVA-SVIL 108
+ I+W R+PQ++TA++AG GLSV+G+ MQ++ RNPL P LGIS+ + G A SVI
Sbjct: 66 YDAIIWNIRLPQALTAIIAGIGLSVAGVAMQSILRNPLGSPFTLGISNAGAFGAAVSVIF 125
Query: 109 L-SGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGY 166
L +G I + + TI+A + +I+ +S+ S ++++ GV +
Sbjct: 126 LGTGKIQSTIANPITINNPYITTISAFIFCMIATGVILMISRIRGASPEVMVLTGVALSS 185
Query: 167 VANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIK-TLN 225
+ A +YF+ + + A V W G +R + +++ L + +++ L + FLL + N
Sbjct: 186 LFTAGTMFLQYFASDTQLAAVVFWTFGDVSRANWSELGL-MSVLVTLACIYFLLNRWNYN 244
Query: 226 LLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSD 285
+ G+ AK LG+N+++ RL+ ++ S ++TA++ A+ G + F+GL PH+ R ++ D
Sbjct: 245 AIDAGNETAKGLGVNVEQVRLFGMTISAMITAVLVAFLGVIGFVGLVCPHMVRRII-GDD 303
Query: 286 HRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
R L+P + + G L L + +AR+ LPV +TA +GAP+ +Y++ K
Sbjct: 304 QRYLIPGSCVMGGILLLTSDTVARLIVAPYVLPVAVLTAFMGAPVFIYLIIRGYK 358
>gi|118068730|ref|ZP_01536980.1| transport system permease protein [Serratia proteamaculans 568]
gi|118016901|gb|EAV30823.1| transport system permease protein [Serratia proteamaculans 568]
Length = 334
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 109/316 (34%), Positives = 179/316 (56%), Gaps = 14/316 (4%)
Query: 26 LGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRN 85
+G++ + R++W S +W NI R+P+ + A+V G L+VSG MQ +FRN
Sbjct: 28 MGALTLSFRTLWQQPF-SDTSWHIWLNI----RLPRVLLAVVIGCALAVSGAVMQGLFRN 82
Query: 86 PLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
PLA PS+LGISSG +L VA +I++ ++ V I +AA G++ V LI
Sbjct: 83 PLADPSLLGISSGGALFVALIIVMPLALPPV-------IALYGHMLAAFLGSMLVSLLIY 135
Query: 146 FVSQKVKGSVT-LLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMT 204
+S+ GS++ LL+ G+ I + A IGV Y S ++ +R + +W +GS ++ +
Sbjct: 136 GISRSGHGSLSRLLLAGIAINALCMAAIGVLSYLSNDQQLRQFSLWMMGSLSQSQWPTLA 195
Query: 205 LFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCG 264
+ +++ + L+ L + LNLL LGD A LG+N++RA+L ++ S +L A G
Sbjct: 196 VSASLILPTILLTLLQARRLNLLQLGDEEAHYLGVNVQRAKLQLLLLSALLIGAAVAMSG 255
Query: 265 PVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITA 324
+ F+GL VPHL R L DHR L+P + L G+ L L+ + +AR +PV +T+
Sbjct: 256 VIGFIGLVVPHLVRMRL-GGDHRWLLPCSALGGACLLLVSDTLARTLVAPAEMPVGLMTS 314
Query: 325 LIGAPIVVYVLFSKRK 340
LIG P ++++ +R+
Sbjct: 315 LIGGPYFLWLVMRQRE 330
>gi|119875041|ref|ZP_01642163.1| transport system permease protein [Stenotrophomonas maltophilia
R551-3]
gi|119822161|gb|EAX24752.1| transport system permease protein [Stenotrophomonas maltophilia
R551-3]
Length = 347
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 87/289 (30%), Positives = 160/289 (55%), Gaps = 11/289 (3%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
+VW+ R+P+++ + GA L+++G +Q +F NPLA P ++G+S GA+LG + I+L +
Sbjct: 65 VVWQLRIPRALLGAMVGASLAMAGASLQGLFGNPLADPGIVGVSQGAALGAVAAIVLGAA 124
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSV-MTLIVFVSQKVKGSVTLLIIGVMIGYVANAI 171
G G + A GAL++ +T + K G+ TLL++G+ + +A+
Sbjct: 125 ---------GAAGWLVPVAAFAGGALAIGLTYALARPGKGTGNATLLLVGIAMAAFCSAL 175
Query: 172 IGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGD 231
IG Y + E ++++ V W +GS AR + + + + I + L L++L LG+
Sbjct: 176 IGFLTYIASESELQSLVFWQMGSLARANWADVAAVVPLFAIGVFALQRLATPLDMLALGE 235
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
A++LGL++ R R +++ S +L A+ G + F+GL VPH+ R LL HR L+P
Sbjct: 236 RQAQHLGLDVTRTRRRLVAFSALLVGAAVAFAGSISFVGLVVPHVAR-LLVGPGHRWLLP 294
Query: 292 AAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+ L G+ L ++ + AR +P+ +A +GAP ++++ +R+
Sbjct: 295 LSGLLGALLIVVADTAARTLDPPAEIPLGLFSAALGAPFFLWLVLQQRR 343
>gi|92114543|ref|YP_574471.1| transport system permease protein [Chromohalobacter salexigens DSM
3043]
gi|91797633|gb|ABE59772.1| transport system permease protein [Chromohalobacter salexigens DSM
3043]
Length = 356
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 99/322 (30%), Positives = 178/322 (55%), Gaps = 15/322 (4%)
Query: 23 NLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTV 82
++ G PL+ + + + + IVW R+P ++ A++ G L+ +G +MQT+
Sbjct: 42 DIATGPGQYPLQDILAALVAPGDVSQTLRVIVWNIRLPVALMAVLVGVSLASAGAEMQTI 101
Query: 83 FRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMT 142
NPLA P LGISS AS+G A I L S+ + L++ ++ A +A A +
Sbjct: 102 LNNPLADPFTLGISSAASVGAALAITLGVSV--IPLAQPLWVTGNAFLMALGA------S 153
Query: 143 LIVFVSQKVKGSV--TLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSG 200
L ++ +++G TL+++G+ + + NA++G+ +Y + E ++ V W LGS + S
Sbjct: 154 LFIWGISRLRGVSVQTLVLMGIAVMFFFNAMLGLMQYVASAEALQQLVFWSLGSLGKASW 213
Query: 201 NQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVT 260
+++ L +++ LP+ L L LGD +AK +G+++ R RL ++ C +L A+
Sbjct: 214 DKVGLIAAALLVTLPIFLHAGWRLTALRLGDMHAKAMGIDVARLRLRMLLCCSLLAAMAV 273
Query: 261 AYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIAR--MPGFEGALP 318
A+ G V F+GL PH+ R LL D RV +P + L+G+ + L +++++ +PG LP
Sbjct: 274 AFVGTVGFVGLVGPHIAR-LLVGEDQRVFLPVSALSGALIMSLTSILSKTLVPGI--LLP 330
Query: 319 VNSITALIGAPIVVYVLFSKRK 340
+ +TALIG P V ++ R+
Sbjct: 331 IGILTALIGLPFFVSLILRSRR 352
>gi|116753745|ref|YP_842863.1| transport system permease protein [Methanosaeta thermophila PT]
gi|116665196|gb|ABK14223.1| transport system permease protein [Methanosaeta thermophila PT]
Length = 374
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 84/290 (28%), Positives = 148/290 (51%), Gaps = 9/290 (3%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
+VW R P+ + L+AG GL + G MQ V +NPLA P LGIS+GA G++ ++ +
Sbjct: 91 VVWNIRFPRIVGGLMAGFGLGMCGCVMQAVLKNPLASPFTLGISAGAQFGISVAAVIGFA 150
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAII 172
I G +G A L + ++ + K S L++ G+ + Y A+
Sbjct: 151 IFGGPYFIIGN--------AFICALLCSLLIVALAAIKGATSENLVLAGIAVNYFFTAMS 202
Query: 173 GVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDG 232
+ KYF+ +E +R WG+G A S + + I +I PL LN++ GD
Sbjct: 203 QLLKYFASDEQLRIMTNWGMGDLAAFSWANSRILLGIFLICFPLLISRSWDLNIMTAGDD 262
Query: 233 YAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPA 292
AK++G++ +R R++++ S +L A + + G + F+GL PH+ R ++ DHR L+PA
Sbjct: 263 AAKSIGVDAERTRIFIMVISSLLVATIVCFVGTIGFVGLVAPHMAR-MVIGGDHRFLIPA 321
Query: 293 AILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKNE 342
+ GS + + + + +P +T++IG P +Y++ ++ E
Sbjct: 322 SGALGSLVLVSADAVGMNAIAPTIIPTGIMTSIIGVPFFMYLMLKGKRKE 371
>gi|13277334|emb|CAC34394.1| HmuU protein [Rhizobium leguminosarum]
Length = 370
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 96/290 (33%), Positives = 158/290 (54%), Gaps = 8/290 (2%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
I++ R+P++I + GA L+VSG MQ +FRNPLA P ++G+SSGASLG ++I+L
Sbjct: 81 IIFDIRLPRAILGFLIGASLAVSGTVMQGLFRNPLADPGLVGVSSGASLGAVAMIVLGS- 139
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV---TLLIIGVMIGYVAN 169
G+A +G AL AA G L V TL+++ G T+L+ G+ +G +A
Sbjct: 140 --GLAAPLQALLGIYALPAAAFGGGL-VTTLLLYRIATRHGQTSVATMLLAGIALGALAL 196
Query: 170 AIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLL 229
AI G+ Y + ++ +R W +GS A + ++ I+++ + + LN + L
Sbjct: 197 AITGLLIYMANDQQLRDLTFWSMGSLAGATWTKIAAASPIILLSFTALPFMARGLNAITL 256
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A ++G+ ++R + I T A G + F+G+ VPH+ R + DHR L
Sbjct: 257 GEAAAFHMGVPVQRLKNVAIVGVAAATGASVAVSGGIGFVGIVVPHILR-MAIGPDHRFL 315
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+PAA L G SL + +++AR LP+ ITA +G P +++L +R
Sbjct: 316 LPAAALLGGSLLIFADVLARTLVAPAELPIGIITAAVGGPFFLWILLRQR 365
>gi|73668013|ref|YP_304028.1| Fe(III) dicitrate ABC transporter, permease [Methanosarcina barkeri
str. Fusaro]
gi|72395175|gb|AAZ69448.1| Fe(III) dicitrate ABC transporter, permease [Methanosarcina barkeri
str. Fusaro]
Length = 347
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 99/334 (29%), Positives = 181/334 (54%), Gaps = 11/334 (3%)
Query: 9 LIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVA 68
L+ ISV+I F F L+++ G + +R V + + A Q IVW R+P ++ A+V
Sbjct: 20 LLSISVAIFFTFILDIMTGPASLSVREVISTIFFPAYSERSVQVIVWTFRLPVALMAVVT 79
Query: 69 GAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIA 128
G L ++G MQT+ NPLA P LGIS+ A G A I+ + A + I
Sbjct: 80 GITLGLAGANMQTILDNPLASPYTLGISAAAGFGAALAIVFGVGVLPFADTLFVPINAFV 139
Query: 129 LTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYV 188
++ +S M + K S T+++ G+ + ++ ++++ + +Y + E ++A V
Sbjct: 140 FSL------ISCMAIYGIARFKRATSETIVLTGIAVLFLFDSLLALLEYTANPEQVQAIV 193
Query: 189 IWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYV 248
W GS + + + + + I+++++PL + + L L LGD AK+LG+N+++ RL
Sbjct: 194 FWLFGSLTKTTWTTLGITVGIVLMVIPLLAIDVWKLTALRLGDDKAKSLGVNVEKMRLKG 253
Query: 249 ISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIA 308
+ ILT+ A+ G + F+GL PH+ R +L DHR +P + L+G+ + ++++
Sbjct: 254 LILISILTSTAVAFVGTIGFIGLVAPHIAR-MLVGEDHRYFLPFSALSGAFILSTASVLS 312
Query: 309 R--MPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+ +PG P+ +T+LIG P V++L SK++
Sbjct: 313 KAVVPGI--VFPIGILTSLIGIPFFVWLLLSKKR 344
>gi|148378304|ref|YP_001252845.1| iron(III) transport system, permease protein [Clostridium botulinum
A str. ATCC 3502]
gi|153933479|ref|YP_001382705.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium botulinum A str. ATCC 19397]
gi|153936012|ref|YP_001386256.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium botulinum A str. Hall]
gi|148287788|emb|CAL81854.1| putative iron(III) transport system, permease protein [Clostridium
botulinum A str. ATCC 3502]
gi|152929523|gb|ABS35023.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium botulinum A str. ATCC 19397]
gi|152931926|gb|ABS37425.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium botulinum A str. Hall]
Length = 372
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 98/291 (33%), Positives = 164/291 (56%), Gaps = 7/291 (2%)
Query: 49 VWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVIL 108
+++ I+W+ R P+ + A++AG GL++ G+ MQ +NPLA P +LGISSGASLG I+
Sbjct: 81 MFEEIIWQIRFPRVLLAMIAGIGLTLCGVVMQASVQNPLADPYILGISSGASLGATFSIM 140
Query: 109 LSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVA 168
+ G LS+LG + A A AGAL VM L + SV L++ G +I +
Sbjct: 141 IGFGAAG-TLSELG-VAFWAFIGAFGAGAL-VMGLASIGGK--MSSVKLVLAGTVINALC 195
Query: 169 NAIIGVFKYFSVE-EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLL 227
NAI YF+ + E IR+ W +GS ++ + I+++ + L + +N +
Sbjct: 196 NAISSFIVYFAKDAEGIRSVTFWTMGSLTSAQWGKLPIITTIVMLAVVLFLSQARIMNTM 255
Query: 228 LLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHR 287
++G+ A LG+N+ R + S +T ++ A CG + F+GL VPH+ R ++ SD++
Sbjct: 256 MMGEETAVTLGINLNFYRRLYMVISVAVTGVIVATCGIIGFVGLIVPHIVRSIV-GSDNK 314
Query: 288 VLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSK 338
L+P +IL + + ++ AR G LP+ IT+L+GAP+ +Y+L +
Sbjct: 315 RLLPTSILFSAIFLIWADIFARTIIPNGELPIGIITSLLGAPVFMYMLVKR 365
>gi|75195784|ref|ZP_00705854.1| COG4139: ABC-type cobalamin transport system, permease component
[Escherichia coli HS]
gi|75209246|ref|ZP_00709490.1| COG4139: ABC-type cobalamin transport system, permease component
[Escherichia coli B171]
gi|75256668|ref|ZP_00728285.1| COG4139: ABC-type cobalamin transport system, permease component
[Escherichia coli E22]
Length = 304
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 94/287 (32%), Positives = 165/287 (57%), Gaps = 12/287 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 30 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 87
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 88 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 139
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 140 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 198
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 199 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 257
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
L G+S LL +++AR+ LP+ +TA +GAP+ +++L R+
Sbjct: 258 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKARR 304
>gi|153938043|ref|YP_001389671.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium botulinum F str. Langeland]
gi|152933939|gb|ABS39437.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium botulinum F str. Langeland]
Length = 372
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 98/291 (33%), Positives = 164/291 (56%), Gaps = 7/291 (2%)
Query: 49 VWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVIL 108
+++ I+W+ R P+ + A++AG GL++ G+ MQ +NPLA P +LGISSGASLG I+
Sbjct: 81 MFEEIIWQIRFPRVLLAMIAGIGLTLCGVVMQASVQNPLADPYILGISSGASLGATFSIM 140
Query: 109 LSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVA 168
+ G LS+LG + A A AGAL VM L + SV L++ G +I +
Sbjct: 141 IGFGAAG-TLSELG-VAFWAFIGAFGAGAL-VMGLASIGGK--MSSVKLVLAGTVINALC 195
Query: 169 NAIIGVFKYFSVE-EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLL 227
NAI YF+ + E IR+ W +GS ++ + I+++ + L + +N +
Sbjct: 196 NAISSFIVYFAKDAEGIRSVTFWTMGSLTSAQWGKLPIITTIVMLAVVLFLSQARIMNTM 255
Query: 228 LLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHR 287
++G+ A LG+N+ R + S +T ++ A CG + F+GL VPH+ R ++ SD++
Sbjct: 256 MMGEETAVTLGINLNFYRRLYMVISVAVTGVIVATCGIIGFVGLIVPHIVRSIV-GSDNK 314
Query: 288 VLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSK 338
L+P +IL + + ++ AR G LP+ IT+L+GAP+ +Y+L +
Sbjct: 315 RLLPTSILFSAIFLIWADIFARTIIPNGELPIGIITSLLGAPVFMYMLVKR 365
>gi|20092717|ref|NP_618792.1| hemin ABC transporter, permease protein [Methanosarcina acetivorans
C2A]
gi|19918007|gb|AAM07272.1| hemin ABC transporter, permease protein [Methanosarcina acetivorans
C2A]
Length = 369
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 155/291 (53%), Gaps = 13/291 (4%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
+VW R+P+ +VAGAGL+VSG MQ + RNPL P +GISS A+ G + I L
Sbjct: 85 VVWHLRLPRLFLGVVAGAGLAVSGCVMQGITRNPLVSPFTIGISSAAAFGASLAIFLG-- 142
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV--TLLIIGVMIGYVANA 170
S L G++ + A AL V VF ++GS TL++ G+ I Y+ +A
Sbjct: 143 ------SGLASGGQLFVVANAFVFAL-VCAFSVFGLANLRGSSPETLVLAGIAISYLFSA 195
Query: 171 IIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLN-LLLL 229
+ V ++F+ EE + A V W GS + + + M+ P+ LN ++L+
Sbjct: 196 LAAVLQFFASEEKLMAMVHWSFGSLTNSDWDSIAIISCTMLFTFPVLMRYSWDLNTIMLV 255
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
DG AK+LG++ R R ++ S ++TA + ++ G + F+GL PH+ R +L DHR L
Sbjct: 256 DDGTAKSLGIHASRVRTTLLIISSLITATIISFTGIIGFVGLVAPHVTRFIL-GGDHRFL 314
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+P + GS L ++ ++ R P+ + + +G P+ VY+L ++++
Sbjct: 315 LPGTCIAGSILVIMADITGRCLIPPIVFPLGVVISFVGVPMFVYLLITEKE 365
>gi|18310199|ref|NP_562133.1| probable ABC transporter [Clostridium perfringens str. 13]
gi|18144878|dbj|BAB80923.1| probable ABC transporter [Clostridium perfringens str. 13]
Length = 352
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 104/344 (30%), Positives = 186/344 (54%), Gaps = 29/344 (8%)
Query: 10 IFISVSIVFFFFLNLVLG----SVHIP--------LRSVWNIVCGSAEEPV--VWQNIVW 55
+FI+V ++ F +++LG +V IP L V+ I G+ +E + +I+W
Sbjct: 12 VFIAVLLILLFISSIILGISFGAVDIPPYDVYRVFLYKVFGIKIGNLDEILNSTLFDIIW 71
Query: 56 KSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGG 115
R+P+ + AG L++ G+ MQ +NPL P +LG+SSGASLG IL+ S
Sbjct: 72 GVRMPRVLLGAFAGMALAMVGVIMQATIQNPLGDPYILGLSSGASLGATFSILIGFS--- 128
Query: 116 VALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVT---LLIIGVMIGYVANAII 172
G + + A GAL + ++ V+ K+ G +T +++ G++I + +++
Sbjct: 129 ------GVLSSFGAPLGAFLGAL-IASIFVYFLAKIGGRITPFKMILAGMVISSICSSLT 181
Query: 173 GVFKYFSVE-EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGD 231
+ + S + E IR W +GS A + + L I I +I L F + LNL++LGD
Sbjct: 182 SLIIFLSKDNEGIRTVNFWMMGSLAGAQWSNIVLPIAISVIPLIYFFTQYRNLNLMVLGD 241
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
+ LGLNI++ R + S ++T ++ + CG + F+G+ +PH+ R L+ +DH+ L+P
Sbjct: 242 ETSITLGLNIEKHRKIYMILSSLITGVIVSVCGTIGFVGIMIPHIVR-LIFGTDHKTLLP 300
Query: 292 AAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
+ L G+ + ++IAR LP+ IT++IGAP +++++
Sbjct: 301 FSALVGAIFLIWADVIARCAINNMELPIGIITSVIGAPFLLWLM 344
>gi|26247962|ref|NP_754002.1| vtamin B12-transporter permease [Escherichia coli CFT073]
gi|34222576|sp|Q8FH26|BTUC_ECOL6 Vitamin B12 import system permease protein btuC
gi|26108365|gb|AAN80567.1|AE016761_142 Vitamin B12 transport system permease protein btuC [Escherichia
coli CFT073]
Length = 326
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 163/283 (57%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 110 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 162 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMVALIPVLLWIC-CQSRPMNMLALGEIS 220
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 221 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 279
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 280 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLL 322
>gi|75177391|ref|ZP_00697480.1| COG4139: ABC-type cobalamin transport system, permease component
[Shigella boydii BS512]
Length = 304
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 94/287 (32%), Positives = 165/287 (57%), Gaps = 12/287 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 30 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 87
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 88 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 139
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 140 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 198
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 199 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 257
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
L G+S LL +++AR+ LP+ +TA +GAP+ +++L R+
Sbjct: 258 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKARR 304
>gi|87122087|ref|ZP_01077971.1| hemin ABC transporter, permease protein, putative [Marinomonas sp.
MED121]
gi|86162634|gb|EAQ63915.1| hemin ABC transporter, permease protein, putative [Marinomonas sp.
MED121]
Length = 363
Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 97/299 (32%), Positives = 167/299 (55%), Gaps = 9/299 (3%)
Query: 49 VWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVIL 108
V + ++ + R+P+++ A++ GA L+V G MQ +FRNPLA P ++G++ GASL S+I+
Sbjct: 70 VVETVITQIRLPRTLLAMLVGAALAVCGAAMQGLFRNPLADPGLVGVTGGASLAAVSMIV 129
Query: 109 LSGSIGGVALSKLGYI-GEIALTIAATAGALSVMTLIVFVSQKVKGS--VTLLIIGVMIG 165
L GG ALS + I G+ +L + + GAL +L+ ++ G+ ++L+ G+ IG
Sbjct: 130 L----GGTALSFINQILGQYSLMLVSFLGALITTSLVSRIATTKYGTSVTSMLLAGIAIG 185
Query: 166 YVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLN 225
V A +G YF+ + +R+ W +GS + + ++ + L L L K LN
Sbjct: 186 IVTGAAVGFLTYFADDSQLRSLTFWAMGSVGGATWQTVLSAGSLIAVPLILIPLQAKQLN 245
Query: 226 LLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSD 285
LLLG+ A++LG++++R + +I + + + G + F+GL VPHL R L D
Sbjct: 246 ALLLGESEARHLGIDVERVKRRLIFLTAVAVGACVSVSGMIGFVGLIVPHLVR-LTLGPD 304
Query: 286 HRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVV-YVLFSKRKNEM 343
HR L+P + L G+ L+ ++++R LP+ IT LIG P + V++ R N +
Sbjct: 305 HRYLLPLSALLGALFLLIADILSRTIIAPAELPIGLITTLIGGPFFIGMVVYRARSNAL 363
>gi|20090992|ref|NP_617067.1| Fe(III) dicitrate ABC transporter, permease [Methanosarcina
acetivorans C2A]
gi|19916079|gb|AAM05547.1| Fe(III) dicitrate ABC transporter, permease [Methanosarcina
acetivorans C2A]
Length = 355
Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 94/332 (28%), Positives = 178/332 (53%), Gaps = 7/332 (2%)
Query: 9 LIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVA 68
L+ IS +I F ++++ G + + V + + A Q IVW R+P ++ A+V
Sbjct: 28 LLLISAAIFLTFVIDIMTGPASLSVSEVISTILFPAYSEPSVQVIVWTFRLPVALMAIVI 87
Query: 69 GAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIA 128
G L ++G MQT+ NPLA P LGIS+ A G A I+L + A + +
Sbjct: 88 GIALGLAGANMQTILDNPLASPYTLGISAAAGFGAALAIVLGVGVLPFADTLFVPVNAFV 147
Query: 129 LTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYV 188
++ +S M + K S T+++ G+ + ++ N+++G+ +Y + E ++A V
Sbjct: 148 FSL------ISCMAIYGIARFKKATSETIVLTGIAVLFLFNSLLGLLEYKANPEQVQAIV 201
Query: 189 IWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYV 248
W GS + + + + + I+++++PL + + L L LGD AK+LG++++R R+
Sbjct: 202 FWLFGSLTKTNWTTLRITVGIVLVVIPLLAIDVWKLTALRLGDDKAKSLGVDVERMRIKG 261
Query: 249 ISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIA 308
+ +LTA A+ G + F+GL PH+ R +L DHR +P + L+G+ + ++++
Sbjct: 262 LILISVLTATAVAFVGTIGFIGLVSPHIAR-MLVGEDHRYFLPCSALSGAFILSTASILS 320
Query: 309 RMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
++ P+ +T+LIG P +++L SK+K
Sbjct: 321 KIVVPGIIFPIGILTSLIGIPFFIWLLLSKKK 352
>gi|16129667|ref|NP_416226.1| vitamin B12 transporter subunit: membrane component of ABC
superfamily [Escherichia coli K12]
gi|89108551|ref|AP_002331.1| vitamin B12 transporter subunit [Escherichia coli W3110]
gi|91210925|ref|YP_540911.1| vitamin B12 transport permease protein [Escherichia coli UTI89]
gi|117623888|ref|YP_852801.1| vitamin B12 transporter subunit: membrane component of ABC
superfamily [Escherichia coli APEC O1]
gi|2507489|sp|P06609|BTUC_ECOLI Vitamin B12 import system permease protein btuC
gi|1742791|dbj|BAA15479.1| vitamin B12 transporter subunit [Escherichia coli W3110]
gi|1788004|gb|AAC74781.1| vitamin B12 transporter subunit: membrane component of ABC
superfamily [Escherichia coli K12]
gi|91072499|gb|ABE07380.1| vitamin B12 transport permease protein [Escherichia coli UTI89]
gi|115513012|gb|ABJ01087.1| vitamin B12 transporter subunit: membrane component of ABC
superfamily [Escherichia coli APEC O1]
Length = 326
Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 163/283 (57%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 110 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 162 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 220
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 221 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 279
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 280 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLL 322
>gi|24112893|ref|NP_707403.1| vtamin B12-transporter permease [Shigella flexneri 2a str. 301]
gi|30063022|ref|NP_837193.1| vtamin B12-transporter permease [Shigella flexneri 2a str. 2457T]
gi|50400384|sp|Q7C1M5|BTUC_SHIFL Vitamin B12 import system permease protein btuC
gi|24051837|gb|AAN43110.1| Vitamin B12 transport permease protein [Shigella flexneri 2a str.
301]
gi|30041271|gb|AAP17000.1| Vitamin B12 transport permease protein [Shigella flexneri 2a str.
2457T]
Length = 326
Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 163/283 (57%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 110 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 162 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 220
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 221 ARQLGLPMWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 279
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 280 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLL 322
>gi|118443298|ref|YP_878158.1| iron (III) dicitrate transport system permease protein [Clostridium
novyi NT]
gi|118133754|gb|ABK60798.1| iron (III) dicitrate transport system permease protein [Clostridium
novyi NT]
Length = 350
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 96/291 (32%), Positives = 168/291 (57%), Gaps = 14/291 (4%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILL--S 110
I+ R+P+ + A + G+GLSV G Q++F+NP+A P +LG+SSGA+ G ++L S
Sbjct: 68 IILNLRLPRVLLASLVGSGLSVVGASFQSIFKNPMADPYILGVSSGAAFGATLTLILGLS 127
Query: 111 GSIGGVALSKLG-YIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVAN 169
GS G+ + +G +IG I I V+ I V +K+ + LL+ G+ I ++ +
Sbjct: 128 GSFLGMGATAIGAFIGAIITVI--------VVYSIARVGKKIP-TTMLLLAGIAISFMLS 178
Query: 170 AIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLL 229
+ I + F E I ++W +GS + Q+ L +++I + L ++ + LN++LL
Sbjct: 179 SFISLIMIFK-REQIENIIMWTMGSLGAATWEQIILLTPVILIGIVLLYIFSRHLNIMLL 237
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
GD AKNLG+N + + ++ S I+ A+V + G + F+GL +PH R +L SD+RV+
Sbjct: 238 GDDTAKNLGINTDKIKKVLMVISSIIVALVVSVSGVIGFIGLIIPHTIRMIL-GSDNRVI 296
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+P + L G+ ++C+ +AR+ +PV IT+L G P + +L+S +K
Sbjct: 297 IPFSALGGAIFLIICDTLARILVPPTEIPVGIITSLFGVPFFIKILYSSKK 347
>gi|157080300|gb|ABV20008.1| vitamin B12 import system permease protein btuC [Escherichia coli
E24377A]
Length = 326
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 163/283 (57%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 110 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 162 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 220
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 221 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 279
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 280 ALAGASALLLADVVARLALAAAELPIGVVTATLGAPVFIWLLL 322
>gi|83590309|ref|YP_430318.1| transport system permease protein [Moorella thermoacetica ATCC
39073]
gi|83573223|gb|ABC19775.1| transport system permease protein [Moorella thermoacetica ATCC
39073]
Length = 357
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 97/289 (33%), Positives = 155/289 (53%), Gaps = 6/289 (2%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILL- 109
Q I+W R+P+ + A AG GLSV+G MQ + RNPLA P LG+S GA+ G A IL
Sbjct: 64 QVIIWNIRLPRVLGAFTAGVGLSVAGCVMQNILRNPLASPFTLGVSQGAAFGAAVAILAL 123
Query: 110 -SGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKG--SVTLLIIGVMIGY 166
+GS + +T +A GA++ +I+F++ +VKG +++ GV +G
Sbjct: 124 GAGSTHSTGADAVLINNPYLVTCSAFLGAMAATLIILFLA-RVKGVSPEAMVLAGVALGS 182
Query: 167 VANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNL 226
+ +A + +YF+ + + A V W G R S + L + L N
Sbjct: 183 LFSAATIILQYFASDVQVAAMVFWTFGDIGRASWRDLELMATVTGAGLLYFMANRWNYNA 242
Query: 227 LLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDH 286
L G+ A+ LG+ +++ RL + + ++TA V ++ G + F+GLA PHL R ++ DH
Sbjct: 243 LDSGEETAQGLGVPVEKIRLTGMFIASLITAAVVSFLGIIGFIGLAGPHLMRRVI-GGDH 301
Query: 287 RVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
R L+PAA + G L L + +AR LPV +IT+ +GAP+ +Y+L
Sbjct: 302 RFLIPAAAVMGGFLLLASDTVARTVISPVVLPVGAITSFMGAPLFLYLL 350
>gi|123442456|ref|YP_001006435.1| putative vitamin B12 transport system permease protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122089417|emb|CAL12265.1| putative vitamin B12 transport system permease protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 335
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 91/283 (32%), Positives = 156/283 (55%), Gaps = 13/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L+VSG MQ +F NPLA P +LG+++GA + + +LL +
Sbjct: 58 VWQLRLPRALAVLMVGASLAVSGAVMQALFENPLAEPGLLGVANGAGVALVMAVLLGHGL 117
Query: 114 GGVALSKLGYIGEIALTIAATAGA-LSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAII 172
+ L+ A AGA L M L+ F +++ + LL++GV +G V +AI+
Sbjct: 118 LPIWF----------LSACAIAGALLMTMLLLGFARRRLLTNARLLLVGVALGIVCSAIM 167
Query: 173 GVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDG 232
YFS D+R + W +G F+ + L + ++ I+L L LN + LG+
Sbjct: 168 TWAVYFSTSLDLRQLMYWMMGGFSGIDWRHQGLVLALLPIVLWLC-CQGHVLNFMSLGEQ 226
Query: 233 YAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPA 292
A+ LG+++ R ++ G+L + A G + F+GL +PH+ R L +D R L+
Sbjct: 227 QAQQLGVSLHLWRNLLVLAIGLLVGVSVALAGVISFIGLVIPHILR-LTGLTDQRRLLAG 285
Query: 293 AILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
L G + LL +++AR+ F LP+ +TA +GAP+ +++L
Sbjct: 286 CALAGGGILLLADIVARIALFSAELPIGVVTATLGAPLFIWLL 328
>gi|73669751|ref|YP_305766.1| iron(III) ABC transporter, permease protein [Methanosarcina barkeri
str. Fusaro]
gi|72396913|gb|AAZ71186.1| iron(III) ABC transporter, permease protein [Methanosarcina barkeri
str. Fusaro]
Length = 343
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 95/288 (32%), Positives = 163/288 (56%), Gaps = 22/288 (7%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
+VW R+P+ I+A++ GA LS+SG Q F+NPL P +LG+SSGA G A IL S S
Sbjct: 65 VVWDIRLPRIISAMIVGAALSISGASFQGTFQNPLVSPDILGVSSGAGFGAAIAILFSFS 124
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIV--FVSQKVKGSVTLLII--GVMIGYVA 168
A+ I ATA ++ +I+ ++S++++G+ L+++ G+ I +
Sbjct: 125 ---------------AVMIQATAFLFGLVAVILTYYLSKRLRGNTILVMVLGGIAIAALF 169
Query: 169 NAIIGVFKYFS-VEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLL 227
+A+I KY + + + V W +GS + V+ N + + + +I L+ +N+L
Sbjct: 170 SALISCIKYLADPDSKLPEIVYWLMGSLSAVNSNSVLMIVGPALIGFTALLLIGWRINVL 229
Query: 228 LLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHR 287
+GD A++LG+N ++ RL VI C LTA + G + ++GL +PH R ++ DHR
Sbjct: 230 SMGDDEARSLGVNTEKMRLLVIFCCTFLTASAVSISGIIGWVGLVIPHAAR-MIVGPDHR 288
Query: 288 VLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
L+PA+I G++ LL + + R +P+ +TA+IGAP+ +Y+L
Sbjct: 289 KLLPASISLGATFLLLVDDVCRT-ATSIEIPLGILTAIIGAPVFIYLL 335
>gi|77980152|ref|ZP_00835567.1| COG4139: ABC-type cobalamin transport system, permease component
[Yersinia intermedia ATCC 29909]
Length = 350
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 93/289 (32%), Positives = 158/289 (54%), Gaps = 19/289 (6%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLS 110
Q VW+ R+P+S+ ++ GA L+VSG MQ +F NPLA P +LG+++GA + + +LL
Sbjct: 70 QLFVWQLRLPRSLAVMMVGASLAVSGAVMQALFENPLAEPGLLGVANGAGVALVMAVLLG 129
Query: 111 GSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV-FVSQKVKGSVTLLIIGVMIGYVAN 169
G + L+ A AGAL + L++ F +++ + LL++GV +G V +
Sbjct: 130 H----------GLLPIWFLSGCAIAGALLMTVLLLGFARRRLLTNARLLLVGVALGIVCS 179
Query: 170 AIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLI---KTLNL 226
A++ YFS D+R + W +G F+ + Q L ++ LLP+ L + LN
Sbjct: 180 AVMTWAVYFSTSLDLRQLMYWMMGGFSGIDWRQQGL----VVALLPIVVWLCCQGRVLNF 235
Query: 227 LLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDH 286
+ LG+ A+ LG+ + R ++ G+L I A G + F+GL +PH+ R L +D
Sbjct: 236 MSLGEQQARQLGIPLHLWRNLLVLAIGLLVGISVALAGVISFIGLVIPHILR-LTGLTDQ 294
Query: 287 RVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
R L+ L G + L ++IAR+ F LP+ +TA +G+P+ +++L
Sbjct: 295 RRLLTGCALAGGGILLFADVIARIALFSAELPIGVVTATLGSPLFIWLL 343
>gi|110641833|ref|YP_669563.1| vitamin B12 transport system permease protein BtuC [Escherichia
coli 536]
gi|110343425|gb|ABG69662.1| vitamin B12 transport system permease protein BtuC [Escherichia
coli 536]
Length = 326
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 163/283 (57%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 110 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 162 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 220
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 221 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 279
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 280 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLL 322
>gi|63033842|gb|AAY28216.1| FtrD [Streptomyces hygroscopicus]
Length = 360
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 107/319 (33%), Positives = 168/319 (52%), Gaps = 22/319 (6%)
Query: 27 GSVHIPLRSVWNIV----CGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTV 82
GS IP VW++V G A P IVW+ R+P+++ A + GAGL + G MQ +
Sbjct: 46 GSTSIPPGEVWSVVWRRLSGDAPRPGTNDLIVWQLRLPRALLAALVGAGLGLVGTAMQAL 105
Query: 83 FRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMT 142
RNPLA P LG+S+GASLG + I V G + L+ AA AGAL+
Sbjct: 106 VRNPLADPYFLGVSNGASLGAVAAI--------VLGLGSGGALGLGLSGAAFAGALATFA 157
Query: 143 LIVFVSQKVKG--SVTLLIIGVMIGYVANAIIGVFKYFSV----EEDIRAYVIWGLGSFA 196
L+ V+++ G + L++ GV IG + G Y + E+ + + W +GS +
Sbjct: 158 LVWAVARRGGGFAPLRLVLAGVAIG---QFLSGFTSYLVLQAGDEQQTHSVLFWLMGSLS 214
Query: 197 RVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILT 256
S + + +L L + LN LL+GD A LG+++ R R + + + +LT
Sbjct: 215 GASWPLLAAPAVAVPAVLLLLQARARGLNALLMGDETAAGLGIDVVRLRRELFAVTSLLT 274
Query: 257 AIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGA 316
++ A G + F+ L VPH+CR L+ DHR L+P + L G+ L ++ +++ R
Sbjct: 275 GVLVAVSGAIAFVALMVPHVCR-LVVGGDHRRLLPVSALFGALLLVVVDIVCRTAMDTQE 333
Query: 317 LPVNSITALIGAPIVVYVL 335
LPV +T+LIGAP ++Y+L
Sbjct: 334 LPVGVVTSLIGAPALLYLL 352
>gi|124486532|ref|YP_001031148.1| hypothetical protein Mlab_1720 [Methanocorpusculum labreanum Z]
gi|124364073|gb|ABN07881.1| transport system permease protein [Methanocorpusculum labreanum Z]
Length = 350
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 103/341 (30%), Positives = 186/341 (54%), Gaps = 23/341 (6%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGS--AEEPVVWQN---IVWKSRVPQ 61
++ I + + V FF++L +G +IP+ I+ +P Q +++ R+P+
Sbjct: 21 MIFIGLVIMAVGIFFVSLAVGRYNIPIFDTVAILLAQIFPIQPTWTQTMAAVIFNLRLPR 80
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
+I A++ G GL++SG Q++F+NPL P +LG+SSGA +G + IL S
Sbjct: 81 TIAAVLIGGGLALSGAAYQSMFKNPLVSPDLLGVSSGACIGASLAILYS----------- 129
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLII--GVMIGYVANAIIGVFKYFS 179
+G + + I A G L +++ V + + + S TL+++ GV++G + ++I+G+ +Y +
Sbjct: 130 --LGPVIIQIWAFIGGLVAVSITVAIPRLMHNSSTLMLVLSGVIVGGLMSSIMGIIRYVA 187
Query: 180 -VEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLG 238
+ + V W +GS A V + M++ + L LN+L LG+ AK LG
Sbjct: 188 DADTALAEMVYWAMGSLANVDMIDLYYVAPCMLVAGFILLLFRYRLNVLSLGEDEAKTLG 247
Query: 239 LNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGS 298
+++++ R +I C+ +LTA G + ++GL +PHL R +L D+R L+P A++ G+
Sbjct: 248 VDVRKVRGVIIVCATLLTASAVCLAGTIGWVGLVIPHLGR-MLVGPDNRKLLPVAVVLGA 306
Query: 299 SLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+L ++ AR LP++ IT LIGAP Y+L +R
Sbjct: 307 IFMILIDITARSLT-SAELPLSIITGLIGAPFYFYLLIRQR 346
>gi|77959229|ref|ZP_00823251.1| COG4139: ABC-type cobalamin transport system, permease component
[Yersinia bercovieri ATCC 43970]
Length = 340
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 91/286 (31%), Positives = 158/286 (55%), Gaps = 13/286 (4%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLS 110
Q VW+ R+P+++ ++ GA L+VSG MQ +F NPLA P +LG+++GA + + +LL
Sbjct: 60 QLFVWQLRLPRALAVMMVGASLAVSGAVMQALFENPLAEPGLLGVANGAGVALVMAVLLG 119
Query: 111 GSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV-FVSQKVKGSVTLLIIGVMIGYVAN 169
+ + L+ A AGAL + L++ F +++ + LL++GV +G V +
Sbjct: 120 HGLLPIWF----------LSACAIAGALFMTVLLLGFARRRLLTNARLLLVGVALGIVCS 169
Query: 170 AIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLL 229
AI+ YFS D+R + W +G F+ + L I ++ I++ L + LN + L
Sbjct: 170 AIMTWAVYFSTSLDLRQLMYWMMGGFSGIDWRHQGLVIALLPIVIWLC-CQGRVLNFMSL 228
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A+ LG+ + R ++ G+L I A G + F+GL +PH+ R L +D R L
Sbjct: 229 GEQQARQLGIPLHLWRNLLVLAIGLLVGISVALAGVISFIGLVIPHILR-LTGLTDQRRL 287
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
+ L G + LL ++IAR+ F LP+ +TA +G+P+ +++L
Sbjct: 288 LVGCALAGGGILLLADVIARIALFSAELPIGVVTATLGSPLFIWLL 333
>gi|110805479|ref|YP_688999.1| vitamin B12 transport permease protein [Shigella flexneri 5 str.
8401]
gi|110615027|gb|ABF03694.1| vitamin B12 transport permease protein [Shigella flexneri 5 str.
8401]
Length = 326
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+ + L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRMLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 110 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 162 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 220
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 221 ARQLGLPMWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 279
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 280 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLL 322
>gi|110802229|ref|YP_698438.1| ABC transporter, permease protein, FecCD family [Clostridium
perfringens SM101]
gi|110682730|gb|ABG86100.1| ABC transporter, permease protein, FecCD family [Clostridium
perfringens SM101]
Length = 343
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 96/292 (32%), Positives = 164/292 (56%), Gaps = 17/292 (5%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
I+W R+P+ + A GA L+VSG +Q++ +NPLA P LG+SSGASLGV I+L S
Sbjct: 62 IIWVIRLPRVLLAFGVGASLAVSGAIIQSILKNPLASPYTLGVSSGASLGVGIYIVLGIS 121
Query: 113 I---GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKG--SVTLLIIGVMIGYV 167
I G +A+ +G++ G L+V +I+F ++ +G + T+++ G+++
Sbjct: 122 IPVVGNLAMPIIGFL----------CGVLTVFAVIIFSNKVDRGLSNNTVILAGMVLSLF 171
Query: 168 ANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLL 227
+A++ EDI+A +W +GSFA S + + I II + ++ + +++L
Sbjct: 172 TSAMLTTITAL-CSEDIKAITMWQMGSFAMKSWSYVFAGIPFFIIGIFMAVRYTREMDIL 230
Query: 228 LLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHR 287
G+ AK +G+ K+ + ++ ILT A G + F+ L PH+ R + S+H+
Sbjct: 231 SFGEDGAKAIGVETKKVKKTLLVSVAILTGSAVALSGVIGFIDLITPHIVRKIF-GSNHK 289
Query: 288 VLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+++P I+ G +L +L +L++R LPV +ITALIGAP Y+ F KR
Sbjct: 290 IVIPMCIILGGTLMVLTDLVSRTLISPSELPVGAITALIGAPFFAYLYFGKR 341
>gi|15802123|ref|NP_288145.1| vtamin B12-transporter permease [Escherichia coli O157:H7 EDL933]
gi|15831672|ref|NP_310445.1| vtamin B12-transporter permease [Escherichia coli O157:H7 str.
Sakai]
gi|20137341|sp|Q8X4L7|BTUC_ECO57 Vitamin B12 import system permease protein btuC
gi|12515722|gb|AAG56698.1|AE005394_7 vitamin B12 transport permease protein [Escherichia coli O157:H7
EDL933]
gi|13361885|dbj|BAB35841.1| vitamin B12 transport permease protein [Escherichia coli O157:H7
str. Sakai]
Length = 326
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 92/286 (32%), Positives = 163/286 (56%), Gaps = 18/286 (6%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 110 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLI---KTLNLLLLG 230
YFS D+R + W +G F V Q ++M+ L+P+ + + +N+L LG
Sbjct: 162 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQS----WLMLALIPMLLWICCQSRPMNMLALG 217
Query: 231 DGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLM 290
+ A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHR L+
Sbjct: 218 EISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRALL 276
Query: 291 PAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
P L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 277 PGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLL 322
>gi|75513789|ref|ZP_00736165.1| COG4139: ABC-type cobalamin transport system, permease component
[Escherichia coli 53638]
Length = 304
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 94/283 (33%), Positives = 163/283 (57%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 30 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 87
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ S LL+ GV +G + +A++
Sbjct: 88 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSSSRLLLAGVALGIICSALMT 139
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 140 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 198
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 199 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 257
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 258 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLL 300
>gi|82543921|ref|YP_407868.1| vitamin B12 transport permease protein [Shigella boydii Sb227]
gi|81245332|gb|ABB66040.1| vitamin B12 transport permease protein [Shigella boydii Sb227]
Length = 326
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 93/287 (32%), Positives = 164/287 (57%), Gaps = 12/287 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 110 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 162 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 220
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 221 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 279
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
L G+S LL +++AR+ L + +TA +GAP+ +++L R+
Sbjct: 280 ALAGASALLLADIVARLALAAAELLIGVVTATLGAPVFIWLLLKARR 326
>gi|77975259|ref|ZP_00830795.1| COG4139: ABC-type cobalamin transport system, permease component
[Yersinia frederiksenii ATCC 33641]
Length = 340
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 91/286 (31%), Positives = 160/286 (55%), Gaps = 13/286 (4%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLS 110
Q VW+ R+P+++ ++ GA L+VSG MQ +F NPLA P +LG+++GA + + +LL
Sbjct: 60 QLFVWQLRLPRALAVMMVGASLAVSGAVMQALFENPLAEPGLLGVANGAGVALVMAVLLG 119
Query: 111 GSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV-FVSQKVKGSVTLLIIGVMIGYVAN 169
+ + L+ A AGAL + L++ F +++ + LL++GV +G V +
Sbjct: 120 HGLLPIWF----------LSACAIAGALLMTALLLGFARRRLLTNARLLLVGVALGIVCS 169
Query: 170 AIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLL 229
AI+ YFS D+R + W +G F+ + Q L I ++ I++ L + LN + L
Sbjct: 170 AIMTWAVYFSTSLDLRQLMYWMMGGFSGIDWRQQGLVIALLPIVVWLC-CQGRVLNFMSL 228
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A+ LG+++ R ++ G+L I A G + F+GL +PH+ R L +D R L
Sbjct: 229 GEQQARQLGISLHLWRNLLVLAIGLLVGISVALAGVISFIGLVIPHILR-LTGLTDQRRL 287
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
+ L G + LL +++AR+ F LP+ +TA +G+P+ +++L
Sbjct: 288 LVGCALAGGGILLLADVVARIALFSAELPIGVVTATLGSPLFIWLL 333
>gi|145622243|ref|ZP_01778204.1| transport system permease protein [Petrotoga mobilis SJ95]
gi|144947392|gb|EDJ82423.1| transport system permease protein [Petrotoga mobilis SJ95]
Length = 347
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 95/308 (30%), Positives = 170/308 (55%), Gaps = 13/308 (4%)
Query: 35 SVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLG 94
++ N+V G+ E + + R+P+ I + G+ LS++G Q+VFRNPLA PS+LG
Sbjct: 48 TIKNLVLGNEVEINNDWLVFYHIRLPRIILVIFVGSVLSITGATYQSVFRNPLASPSILG 107
Query: 95 ISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGS 154
+S+G++ GVA IL S IG L+ A+ + T + V KVKG
Sbjct: 108 VSAGSAFGVALAILFSEDF---------LIGTYLLSFVLGLVAV-LFTFFISVWSKVKGV 157
Query: 155 VTLLIIGVMIGYVANAIIGVFKYFSVE-EDIRAYVIWGLGSFARVSGNQMTLFIYIMIIL 213
L++ G+ + NA + + +Y + E + V W +GSF R ++ + ++ M+
Sbjct: 158 TVLVLAGMAVTSFFNACVSLVQYLADPYEKLPNIVFWLMGSFNRAGWREVYISLFTMLPG 217
Query: 214 LPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAV 273
+ + +L LN++ +G+ A ++G+N++R R+ +I S ++ A A G + ++GL
Sbjct: 218 IIILLILRWYLNVMSMGEEEALSMGINVRRMRILLIIVSTVMVAPTVAVAGQISWIGLIT 277
Query: 274 PHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVY 333
PH+ R ++ ++HR ++PA + GS L L+ + IAR +P++ +TA IGAP VY
Sbjct: 278 PHIARYII-GANHRYMLPATCILGSVLLLIMDNIARTIT-PAEIPISIVTAFIGAPFFVY 335
Query: 334 VLFSKRKN 341
+L +R++
Sbjct: 336 LLLRRRES 343
>gi|73670202|ref|YP_306217.1| Fe(III) dicitrate ABC transporter, permease [Methanosarcina barkeri
str. Fusaro]
gi|72397364|gb|AAZ71637.1| Fe(III) dicitrate ABC transporter, permease [Methanosarcina barkeri
str. Fusaro]
Length = 347
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 98/334 (29%), Positives = 176/334 (52%), Gaps = 9/334 (2%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITAL 66
L I ++++ F ++ +GS + + V++ + IVW R+P+++ A+
Sbjct: 18 LYFICFAIAVFLAFLTDIAVGSSSLSVYDVFSTIISPHLNDPNTTVIVWDFRLPKALMAI 77
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGE 126
+ GA L+V+G ++QT+ NPLA P LGIS+ A G A ++ L + + G
Sbjct: 78 IVGASLAVAGAEVQTILDNPLASPYTLGISAAAGFGAALAVVF-------GLGTIPFAGS 130
Query: 127 IALTIAATAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAIIGVFKYFSVEEDIR 185
I ++I A + ++I +++ S ++I+ GV + ++ A+I + +Y + +E ++
Sbjct: 131 ILVSINAFIFSFISFSIICLIAKIKNASKEIMILTGVSLLFLFQALISLLEYLATDEQLQ 190
Query: 186 AYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRAR 245
V W GSF S + + + I II++PL + L L LGD AK+LG+N+++ R
Sbjct: 191 KIVFWLFGSFENSSWSTVLICFVIFIIIVPLLAINSWKLTALKLGDEKAKSLGINVEKLR 250
Query: 246 LYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCN 305
L VI C ILTA + G + F+GL PH+ R +L D R +P + L GS L +
Sbjct: 251 LKVIICVTILTASAVCFVGTIGFVGLVPPHIAR-ILTGEDQRYFIPLSALLGSLFLSLAS 309
Query: 306 LIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+ ++ +G P+ T++IG P + ++ KR
Sbjct: 310 IGGKIVCHKGVFPIGIATSMIGVPFFLSLIIMKR 343
>gi|89893880|ref|YP_517367.1| hypothetical protein DSY1134 [Desulfitobacterium hafniense Y51]
gi|89333328|dbj|BAE82923.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 282
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 95/291 (32%), Positives = 159/291 (54%), Gaps = 18/291 (6%)
Query: 52 NIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSG 111
++V++ R+P+ AL+ GAGL++SG Q +F+NPL P +LG+SSGA +G A IL
Sbjct: 3 DVVFQVRLPRVFAALLVGAGLAISGTTYQGIFKNPLVSPDLLGVSSGACVGAALAILNGL 62
Query: 112 SIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLII--GVMIGYVAN 169
GG+ I A G L + + + + ++ S L+++ G+++ +
Sbjct: 63 DAGGI-------------QICALLGGLLAVAITTTIPKLLRNSSNLILVLAGIIVAGFMS 109
Query: 170 AIIGVFKYFS-VEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLL 228
+ +G+ KY + E + V W +GS A S + + + M+I + L + +N+L
Sbjct: 110 SALGLLKYVADPETQLPEIVFWQMGSLATTSMGDVMMIVPAMLISMALLIAVRWRINILS 169
Query: 229 LGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRV 288
LGD A +LG+NI+ R I CS + TA G V ++GL VPHLCR L+ + RV
Sbjct: 170 LGDEEAGSLGINIRVIRGLAIVCSTVTTACAVCISGTVGWIGLVVPHLCRMLVGPDNTRV 229
Query: 289 LMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+ P +I G+S L+ + +AR G +P++ +T IGAP+ ++LF +R
Sbjct: 230 I-PLSIFVGASFMLVVDTVARTVT-SGEIPLSILTGFIGAPLYGWLLFKQR 278
>gi|120556436|ref|YP_960787.1| transport system permease protein [Marinobacter aquaeolei VT8]
gi|120326285|gb|ABM20600.1| transport system permease protein [Marinobacter aquaeolei VT8]
Length = 365
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 89/289 (30%), Positives = 163/289 (56%), Gaps = 9/289 (3%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
I+ R+P ++ A+V GA L ++G +MQTV NPLA P LG+ + A+LG + VI + S
Sbjct: 81 IIEDIRLPYALMAVVVGACLGLAGAEMQTVLNNPLASPFTLGVGAAATLGASLVIAFNIS 140
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV-TLLIIGVMIGYVANAI 171
+ GVA + L ++A A + LI+ +S+ + SV +++ G+ + + NA+
Sbjct: 141 VLGVA-------AHVLLPLSAFVFAAAASLLILVLSRTLGASVHAVVLFGIALLFGINAV 193
Query: 172 IGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGD 231
+G+ ++ + E ++ V W +GS AR S +++ + ++ + LP S + LL G+
Sbjct: 194 VGLIQFMADAESVQQIVFWTMGSLARASLDKVAIVALVLALCLPFSLRNAWAMTLLRSGE 253
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
A++LG+ ++ RL V+ +LTA + G + F+GL PH+ R L+ DHR L+P
Sbjct: 254 EQARSLGIRVEHMRLVVLMRVSLLTAAAMCFVGEIGFIGLVAPHIAR-LMLGEDHRFLLP 312
Query: 292 AAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+ L G+ L L ++ +++ LPV +TAL+G P+ + ++ + +
Sbjct: 313 GSALAGAVLLSLSSIASKLLVPGVVLPVGIVTALVGIPLFITLIIGRSR 361
>gi|150403390|ref|YP_001330684.1| transport system permease protein [Methanococcus maripaludis C7]
gi|150034420|gb|ABR66533.1| transport system permease protein [Methanococcus maripaludis C7]
Length = 359
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 100/341 (29%), Positives = 178/341 (52%), Gaps = 19/341 (5%)
Query: 6 VLVLIFISVSIVFFFFLNLVLGSVHIPLRSVW-----NIVCGSAEEPVVWQN-IVWKSRV 59
+L+L+ IS + + +G+ IPL +V+ +I G N I+W RV
Sbjct: 28 ILILVVISGLLFASALTAVAMGAYEIPLHTVYTTILTHITLGDVSTIGKLHNTIIWDIRV 87
Query: 60 PQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALS 119
P+ + + G L+++G Q VFRNPL P +LG+SSGA+ G A I+ + LS
Sbjct: 88 PRVLLTIFVGGALAIAGAVFQGVFRNPLVEPYILGVSSGAAFGAAMGIVFPTIFFSIQLS 147
Query: 120 KLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFS 179
+ G +A+ + T + T IV TL++ GV+IG + +A++ + KY S
Sbjct: 148 AFAF-GSLAVAMTYTLARVRGETPIV----------TLILAGVIIGSIFSALVSLLKYVS 196
Query: 180 VEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGL 239
+ +R V W +G F + N + + ++ + + + + LN+L +GD A+ LG+
Sbjct: 197 DDTALREIVFWLMGGFYYATWNDVWMIAPLVTVGFFILWAMGWKLNILSMGDDEARTLGV 256
Query: 240 NIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSS 299
N ++ + V+S + +TA + G + ++GL +PH R +L D+R ++PA+++ G
Sbjct: 257 NPEKYKFIVVSIATAITAFAVSLVGIIAWVGLMMPHASRMIL-GPDNRYVIPASMMMGGI 315
Query: 300 LALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+LC+ +AR +PV I +++GAP + Y+L K K
Sbjct: 316 YMILCDTLARTIT-SSEIPVGIIASILGAPYLCYLLRHKGK 355
>gi|83648116|ref|YP_436551.1| ABC-type Fe3+-siderophore transport system, permease component
[Hahella chejuensis KCTC 2396]
gi|83636159|gb|ABC32126.1| ABC-type Fe3+-siderophore transport system, permease component
[Hahella chejuensis KCTC 2396]
Length = 339
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 107/341 (31%), Positives = 174/341 (51%), Gaps = 15/341 (4%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVP 60
M+ + V + + S++ ++LG+ + RSV + S + W I+W R+P
Sbjct: 7 MQYKSTRVWLLLGASLIAAALGAIMLGAYSLTWRSVLSFDLSSQD----WM-ILWHIRLP 61
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSK 120
+ + A + GA L+VSG +Q +FRNPLA P ++GISSG++L A VI+L
Sbjct: 62 RVLLAGIVGAALAVSGAALQGLFRNPLADPGLIGISSGSALAAALVIVLFP-------FS 114
Query: 121 LGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVT--LLIIGVMIGYVANAIIGVFKYF 178
G++G L++AA G + LI V Q S L++ G+ + + A +G Y
Sbjct: 115 AGWLGLYGLSVAAFLGGGATCWLIFKVGQLGAASSVAHLILAGIAVNALCGAAVGFMTYL 174
Query: 179 SVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLG 238
S E R W +GSF + + I + ++ + LN LLLG+ A+ LG
Sbjct: 175 STYEQQRTLAFWTMGSFGGALWPAVGVSFTITLPVIAMLMRHSGDLNRLLLGEQEARYLG 234
Query: 239 LNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGS 298
+ ++ + VI S + A G V F+GL PHL R LL +DHRVL+PA+ + G+
Sbjct: 235 TDTEKLKTRVILLSAVTVGAAVAVSGIVGFVGLVAPHLVR-LLWKADHRVLIPASAVLGA 293
Query: 299 SLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
L + + +AR +PV +T+LIG P +++L S++
Sbjct: 294 VLTISADTLARTLFAPAEMPVGILTSLIGGPFFLWLLLSRK 334
>gi|33603630|ref|NP_891190.1| putative hemin permease [Bordetella bronchiseptica RB50]
gi|33577755|emb|CAE35020.1| putative hemin permease [Bordetella bronchiseptica RB50]
Length = 314
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 100/318 (31%), Positives = 174/318 (54%), Gaps = 20/318 (6%)
Query: 27 GSVHIPLRSVWNIVCG-SAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRN 85
G+VHIPL + ++ G S +W+N+++ R+P+ + A AGA L++ G MQ +FRN
Sbjct: 12 GAVHIPLADLARLIDGDSTPRDALWRNVLFDIRLPRVLFAATAGAALAICGAAMQALFRN 71
Query: 86 PLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
PLA P ++GIS+G ++G I+L+ GG A++ AA AG+L
Sbjct: 72 PLAEPGLVGISAGGAMGAVLAIVLTS--GGFAIT----------APAAFAGSLLATGCAY 119
Query: 146 FVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTL 205
+ ++ G LL+ G+ I VA ++IG+ + + + +R W +GS A G + +L
Sbjct: 120 VLGRRAHGVAGLLLAGIAINTVAGSVIGLLTFMASDAQLRDLTFWSMGSLA---GARWSL 176
Query: 206 FIYIMIILLPLSFLLI---KTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAY 262
++ L S+ L+ + +N LLLG+ A +LG ++ R ++ + ++ + A
Sbjct: 177 LAFLAPWTLLWSWWLMRQWRAMNALLLGEREAHHLGFALRSVRRQLVLATALIVGPLVAA 236
Query: 263 CGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSI 322
G + F+GL VPHL R L +DHR L+PA++L G+ L + +AR+ LP+ +
Sbjct: 237 TGGIGFVGLVVPHLIRMTL-GADHRWLLPASMLAGALALTLADWLARVVIVPAELPIGLV 295
Query: 323 TALIGAPIVVYVLFSKRK 340
T+L+G P +++L R+
Sbjct: 296 TSLVGGPFFLWLLARGRR 313
>gi|83586014|ref|ZP_00924652.1| COG4139: ABC-type cobalamin transport system, permease component
[Escherichia coli 101-1]
Length = 304
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 163/283 (57%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 30 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 87
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 88 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 139
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 140 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 198
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 199 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 257
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 258 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLL 300
>gi|150400551|ref|YP_001324317.1| transport system permease protein [Methanococcus aeolicus Nankai-3]
gi|150013254|gb|ABR55705.1| transport system permease protein [Methanococcus aeolicus Nankai-3]
Length = 359
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 95/294 (32%), Positives = 159/294 (54%), Gaps = 16/294 (5%)
Query: 58 RVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVA 117
R+P + A++ G LS +GL +QT+FRN LA P GISSG L VA VI ++
Sbjct: 67 RLPPILGAILIGLTLSGAGLMLQTLFRNLLASPYTTGISSGVLLIVALVIFINS-----V 121
Query: 118 LSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKY 177
S L G + IA G L MT+++ ++ +VK S ++I+ +++ Y+ I
Sbjct: 122 SSLLDTFGTDKILIAGWCGGLLSMTMLIIIALRVKESNGVIIVALLLSYLFGGIRSYLIA 181
Query: 178 FSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNL 237
+ ++ Y + +G+ ++ +T + II + LS LIK LN LL G+ YAK+
Sbjct: 182 NAQNIQVQEYWEFMVGTITKIHIPDITNMLICTIIFILLSIFLIKPLNALLFGEKYAKSF 241
Query: 238 GLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTG 297
GLN+K+ R+ ++ + + + Y G + F+G+A P+L R L++TSDHR LMP +L G
Sbjct: 242 GLNVKKTRILILLTTSFIVGAIIPYVGLIAFVGIASPYLARPLIKTSDHRWLMPTTMLLG 301
Query: 298 SSLALLCNLIA-----------RMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
L LLC++I+ + LP+ S+ ++G +V+Y+++ K
Sbjct: 302 VVLMLLCHIISLKYFVPIYYIYEISRPASPLPIGSVLDILGGLLVIYMVYRGEK 355
>gi|26250139|ref|NP_756179.1| Putative permease of iron compound ABC transport system
[Escherichia coli CFT073]
gi|91213011|ref|YP_542997.1| putative permease of iron compound ABC transport system
[Escherichia coli UTI89]
gi|26110568|gb|AAN82753.1|AE016768_171 Putative permease of iron compound ABC transport system
[Escherichia coli CFT073]
gi|91074585|gb|ABE09466.1| putative permease of iron compound ABC transport system
[Escherichia coli UTI89]
Length = 330
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 92/294 (31%), Positives = 160/294 (54%), Gaps = 14/294 (4%)
Query: 49 VWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVIL 108
+W NI R+P+ + A++ GA L+ +G+ MQ +FRNP+A P +LG+SSG++L V I+
Sbjct: 47 IWLNI----RLPRVLLAVLVGAALATAGVIMQGLFRNPMADPGLLGVSSGSALMVGVAIV 102
Query: 109 LSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGS--VTLLIIGVMIGY 166
L S V + + A AG+L V T+I ++Q+ + + LL+ G+ I
Sbjct: 103 LPFSFPVVLVL-------YEQMVFAIAGSLVVCTIIFLITQRHRDGSMMQLLLAGIAINA 155
Query: 167 VANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNL 226
+ A IG+ Y E+ +R +W +G+ + + + ++ + + L TLNL
Sbjct: 156 LCGAAIGILSYIGDEQQLRQLTLWMMGNLGQAQWPTLLVASSFILPAIIATTCLAGTLNL 215
Query: 227 LLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDH 286
L LGD A LG+N+KR R ++ S +L + G + F+GL +PHL R + ++H
Sbjct: 216 LQLGDEEAHYLGVNVKRKRQQLLLVSSLLVGAAVSVSGIIGFIGLVIPHLIR-MTTGANH 274
Query: 287 RVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
R L+P + L G+ L L+ + +AR +PV +T+L+G P ++++ R+
Sbjct: 275 RWLIPCSALAGACLLLMADTLARTLVQPAEMPVGLLTSLLGGPYFMWLILRNRR 328
>gi|75190748|ref|ZP_00704015.1| COG4139: ABC-type cobalamin transport system, permease component
[Escherichia coli E24377A]
gi|75228978|ref|ZP_00715565.1| COG4139: ABC-type cobalamin transport system, permease component
[Escherichia coli B7A]
gi|75236833|ref|ZP_00720904.1| COG4139: ABC-type cobalamin transport system, permease component
[Escherichia coli E110019]
Length = 304
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 163/283 (57%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 30 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 87
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 88 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 139
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 140 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 198
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 199 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 257
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 258 ALAGASALLLADVVARLALAAAELPIGVVTATLGAPVFIWLLL 300
>gi|145443|gb|AAA23526.1| cytoplasmic membrane protein
Length = 326
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 92/283 (32%), Positives = 161/283 (56%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G AL + A GAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 110 --------GLTPNWALGLCAIRGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 162 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 220
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 221 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 279
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 280 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLL 322
>gi|88602599|ref|YP_502777.1| transport system permease protein [Methanospirillum hungatei JF-1]
gi|88188061|gb|ABD41058.1| transport system permease protein [Methanospirillum hungatei JF-1]
Length = 360
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 92/320 (28%), Positives = 167/320 (52%), Gaps = 18/320 (5%)
Query: 27 GSVHIPLRSVWNIVCG-----SAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQT 81
GS ++ L V+ + G E V +WK R P+ A+ AG L +G+ MQ+
Sbjct: 48 GSANLSLYEVYAALVGRFFSCGPESSWVADVCLWKLRFPRIFMAIFAGIALGATGVVMQS 107
Query: 82 VFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVM 141
V +NPLA P ++GI S A G + I+ I G + G +L +SV
Sbjct: 108 VLKNPLADPYMMGIQSAAGFGASLAIICGAGIFGGSYLIAGNAFLFSL--------ISVG 159
Query: 142 TLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGN 201
+I K + T+L+ G+ + ++ +A+ +YF+ E +++ + W +G + S +
Sbjct: 160 IIITLADMKGASAETMLLTGIAVMFLFSAMTTFIQYFAEAEAVKSAMFWAVGDLGKTSWD 219
Query: 202 QMTLFIYIMIILLPLSFLLIKT--LNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIV 259
++ I ++ + +LL KT +N+L GD AK+LG+ ++R R+ V+ S +L + V
Sbjct: 220 D--FYVVIPLVAICFLYLLWKTWDMNILASGDETAKSLGIPVRRVRISVMIVSSLLVSGV 277
Query: 260 TAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPV 319
+ G + F+GL PH+CR ++ +++ L+PAA L G+ L ++ + IAR +PV
Sbjct: 278 VCFIGAIGFVGLVSPHICR-IIIGGNNQYLLPAAGLMGAILLIVSDTIARTVMSPAIIPV 336
Query: 320 NSITALIGAPIVVYVLFSKR 339
+TA +G P +Y++ ++
Sbjct: 337 GVVTAFLGVPFFIYLIMFRK 356
>gi|75241410|ref|ZP_00725261.1| COG4139: ABC-type cobalamin transport system, permease component
[Escherichia coli F11]
Length = 304
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 163/283 (57%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG MQ +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 30 VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 87
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A++
Sbjct: 88 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT 139
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R + W +G F V Q L + ++ +LL + + +N+L LG+
Sbjct: 140 WAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWIC-CQSRPMNMLALGEIS 198
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 199 ARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 257
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 258 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLL 300
>gi|33598676|ref|NP_886319.1| putative hemin permease [Bordetella parapertussis 12822]
gi|33574806|emb|CAE39467.1| putative hemin permease [Bordetella parapertussis]
Length = 314
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 99/318 (31%), Positives = 174/318 (54%), Gaps = 20/318 (6%)
Query: 27 GSVHIPLRSVWNIVCG-SAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRN 85
G+VHIPL + ++ G S +W+N+++ R+P+ + A AGA L++ G MQ +FRN
Sbjct: 12 GAVHIPLADLARLIGGDSTPRDALWRNVLFDIRLPRVLFAATAGAALAICGAAMQALFRN 71
Query: 86 PLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
PLA P ++GIS+G ++G I+L+ GG A++ AA AG+L
Sbjct: 72 PLAEPGLVGISAGGAMGAVLAIVLTS--GGFAIT----------APAAFAGSLLATGCAY 119
Query: 146 FVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTL 205
+ ++ G LL+ G+ I VA ++IG+ + + + +R W +GS A G + +L
Sbjct: 120 VLGRRAHGVAGLLLAGIAINTVAGSVIGLLTFMASDAQLRDLTFWSMGSLA---GARWSL 176
Query: 206 FIYIMIILLPLSFLLI---KTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAY 262
++ L S+ L+ + +N LL+G+ A +LG ++ R ++ + ++ + A
Sbjct: 177 LAFLAPWTLLWSWWLMRQWRAMNALLMGEREAHHLGFALRSVRRQLVLATALIVGPLVAA 236
Query: 263 CGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSI 322
G + F+GL VPHL R L +DHR L+PA++L G+ L + +AR+ LP+ +
Sbjct: 237 TGGIGFVGLVVPHLIRMTL-GADHRWLLPASMLAGALALTLADWLARVVIVPAELPIGLV 295
Query: 323 TALIGAPIVVYVLFSKRK 340
T+L+G P +++L R+
Sbjct: 296 TSLVGGPFFLWLLARGRR 313
>gi|75242699|ref|ZP_00726443.1| COG0609: ABC-type Fe3+-siderophore transport system, permease
component [Escherichia coli F11]
gi|110643751|ref|YP_671481.1| putative permease of iron compound ABC transport system
[Escherichia coli 536]
gi|117625788|ref|YP_859111.1| putative permease of iron compound ABC transport system
[Escherichia coli APEC O1]
gi|110345343|gb|ABG71580.1| putative permease of iron compound ABC transport system
[Escherichia coli 536]
gi|115514912|gb|ABJ02987.1| putative permease of iron compound ABC transport system
[Escherichia coli APEC O1]
Length = 318
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 92/294 (31%), Positives = 160/294 (54%), Gaps = 14/294 (4%)
Query: 49 VWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVIL 108
+W NI R+P+ + A++ GA L+ +G+ MQ +FRNP+A P +LG+SSG++L V I+
Sbjct: 35 IWLNI----RLPRVLLAVLVGAALATAGVIMQGLFRNPMADPGLLGVSSGSALMVGVAIV 90
Query: 109 LSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGS--VTLLIIGVMIGY 166
L S V + + A AG+L V T+I ++Q+ + + LL+ G+ I
Sbjct: 91 LPFSFPVVLVL-------YEQMVFAIAGSLVVCTIIFLITQRHRDGSMMQLLLAGIAINA 143
Query: 167 VANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNL 226
+ A IG+ Y E+ +R +W +G+ + + + ++ + + L TLNL
Sbjct: 144 LCGAAIGILSYIGDEQQLRQLTLWMMGNLGQAQWPTLLVASSFILPAIIATTCLAGTLNL 203
Query: 227 LLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDH 286
L LGD A LG+N+KR R ++ S +L + G + F+GL +PHL R + ++H
Sbjct: 204 LQLGDEEAHYLGVNVKRKRQQLLLVSSLLVGAAVSVSGIIGFIGLVIPHLIR-MTTGANH 262
Query: 287 RVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
R L+P + L G+ L L+ + +AR +PV +T+L+G P ++++ R+
Sbjct: 263 RWLIPCSALAGACLLLMADTLARTLVQPAEMPVGLLTSLLGGPYFMWLILRNRR 316
>gi|152971612|ref|YP_001336721.1| vtamin B12-transporter permease [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150956461|gb|ABR78491.1| vtamin B12-transporter permease [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|156622689|dbj|BAF76159.1| ABC-type permease [Klebsiella pneumoniae]
Length = 331
Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 103/285 (36%), Positives = 168/285 (58%), Gaps = 9/285 (3%)
Query: 58 RVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVA 117
R+P+ + AL+ GA L++SG MQ +FRNPLA P +LGISSGA+L VAS ++L
Sbjct: 52 RLPRVLLALLVGAALALSGCVMQGLFRNPLADPGLLGISSGAALAVASWLVLP------- 104
Query: 118 LSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVT-LLIIGVMIGYVANAIIGVFK 176
S G I +AA G+L+VM +I +S+ +GS++ LL++G+ I + A++GV
Sbjct: 105 FSAAGLIALYMPMLAAFIGSLAVMVVIFILSRAEEGSLSRLLLVGIAINALCGALVGVLS 164
Query: 177 YFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKN 236
+ S + +R +WG+GS + + + ++I + + LNLL LGD A
Sbjct: 165 WLSNDAQLRQLSLWGMGSLGQAEWPTLLVAATLIIPAALAVWWMASRLNLLQLGDEEAHY 224
Query: 237 LGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILT 296
LG+N++ + +++ CS +L A+ A G + F+GL VPHL R L DHR L+P ++L
Sbjct: 225 LGVNVQALQRWLLLCSAVLVAVAVAISGVIGFIGLVVPHLMR-LWLGPDHRGLIPGSLLA 283
Query: 297 GSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKN 341
G+ L LL + +AR +PV +T+L+GAP ++++F + +
Sbjct: 284 GAILLLLADTLARTVAAPAEIPVGLLTSLLGAPWFLWLVFRRENS 328
>gi|18310024|ref|NP_561958.1| probable ferric ion ABC transpoter [Clostridium perfringens str.
13]
gi|110799317|ref|YP_695743.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium perfringens ATCC 13124]
gi|18144703|dbj|BAB80748.1| probable ferric ion ABC transpoter [Clostridium perfringens str.
13]
gi|110673964|gb|ABG82951.1| iron chelate uptake ABC transporter, FeCT family, permease protein
[Clostridium perfringens ATCC 13124]
Length = 343
Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 95/292 (32%), Positives = 164/292 (56%), Gaps = 17/292 (5%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
I+W R+P+ + A GA L+VSG +Q++ +NPLA P LG+SSGASLGV I+L S
Sbjct: 62 IIWVIRLPRVLLAFGVGASLAVSGAIIQSILKNPLASPYTLGVSSGASLGVGIYIVLGIS 121
Query: 113 ---IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKG--SVTLLIIGVMIGYV 167
IG +A+ +G++ G L+V +I+F ++ +G + T+++ G+++
Sbjct: 122 IPVIGNLAMPIIGFL----------CGVLTVFAVIIFSNKVDRGLSNNTVILAGMVLSLF 171
Query: 168 ANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLL 227
+A++ ED++A +W +GSFA S + + I +II + ++ + +++L
Sbjct: 172 TSAMLTTVTSI-CSEDLKAITMWQMGSFAMKSWSYVLAGIPFLIIGIFMAVRYTREMDIL 230
Query: 228 LLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHR 287
G+ AK +G+ K+ + ++ ILT A G + F+ L PH+ R + S H+
Sbjct: 231 SFGEDGAKAIGVETKKVKKTLLVSVAILTGSAVALSGVIGFIDLITPHIVRKIFGAS-HK 289
Query: 288 VLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+++P I+ G +L +L +L++R LPV +ITALIGAP Y+ F KR
Sbjct: 290 IVIPMCIILGGTLMVLTDLVSRTLIAPSELPVGAITALIGAPFFAYLYFGKR 341
>gi|20092173|ref|NP_618248.1| iron(III) ABC transporter, permease protein [Methanosarcina
acetivorans C2A]
gi|19917400|gb|AAM06728.1| iron(III) ABC transporter, permease protein [Methanosarcina
acetivorans C2A]
Length = 349
Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 98/327 (29%), Positives = 177/327 (54%), Gaps = 9/327 (2%)
Query: 14 VSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLS 73
VS+ ++L LGS + L V+ G + I+W+ R+ + + AL+ GAGLS
Sbjct: 20 VSVFVMMLVSLNLGSSDMSLSDVFFAFIGQGDPKETV--IIWQLRMARVVAALLTGAGLS 77
Query: 74 VSGLQMQTVFRNPLAGPSVLGISSGASLG--VASVILLSGSIGGVAL-SKLGYIGEIALT 130
++G MQ RNPLA P +LGISS A G +A ++L +GS+ G++ + +T
Sbjct: 78 LAGCVMQNNLRNPLADPYILGISSAAIFGANIAIIVLGAGSVIGISTGGSVAINNPYTVT 137
Query: 131 IAATAGALSVMTLIVFVSQKVKGSV--TLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYV 188
I A ++S M LI+ K++G +++ GV + + A + +YF+ + + A +
Sbjct: 138 ICAFVSSMSAM-LIILTLAKLRGFTPEAIVLAGVALSAIFYAGTIIVQYFATDITLSAAI 196
Query: 189 IWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYV 248
W G RVS ++ + ++++ F + N L G+ AK+LG+ +R R
Sbjct: 197 FWTFGDLGRVSWKEILILNVVVMLTTAYFFFMRWDYNALANGEETAKSLGVKTERVRFLG 256
Query: 249 ISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIA 308
+ + ++T++ ++ G + F+GL P + R ++ DHR L+PA+ L GS++ L + +A
Sbjct: 257 LLTATLVTSVAVSFMGMIGFIGLIGPQIMRRIV-GEDHRFLIPASALAGSAILLASDTLA 315
Query: 309 RMPGFEGALPVNSITALIGAPIVVYVL 335
R+ LPV +IT+L+G P+ +++L
Sbjct: 316 RIVISPVVLPVGAITSLLGGPMFLFIL 342
>gi|33591573|ref|NP_879217.1| putative hemin permease [Bordetella pertussis Tohama I]
gi|33571215|emb|CAE40721.1| putative hemin permease [Bordetella pertussis Tohama I]
Length = 311
Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 100/318 (31%), Positives = 174/318 (54%), Gaps = 20/318 (6%)
Query: 27 GSVHIPLRSVWNIVCG-SAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRN 85
G+VHIPL + ++ G S +W+N+++ R+P+ + A AGA L++ G MQ +FRN
Sbjct: 9 GAVHIPLADLARLIGGDSTPRDALWRNVLFDIRLPRVLFAATAGAALAICGAAMQALFRN 68
Query: 86 PLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIV 145
PLA P ++GIS+G ++G I+L+ GG A++ AA AG+L
Sbjct: 69 PLAEPGLVGISAGGAMGAVLAIVLTS--GGFAIT----------APAAFAGSLLATGCAY 116
Query: 146 FVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTL 205
+ ++ G LL+ G+ I VA ++IG+ + + + +R W +GS A G + +L
Sbjct: 117 VLGRRAHGVAGLLLAGIAINTVAGSVIGLLTFMASDAQLRDLTFWSMGSLA---GARWSL 173
Query: 206 FIYIMIILLPLSFLLI---KTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAY 262
++ L S+ L+ + +N LLLG+ A +LG ++ R ++ + ++ + A
Sbjct: 174 LAFLAPWTLLWSWWLMRQWRAMNALLLGEREAHHLGFALRSVRRQLVLATALIVGPLVAA 233
Query: 263 CGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSI 322
G + F+GL VPHL R L +DHR L+PA++L G+ L + +AR+ LP+ +
Sbjct: 234 TGGIGFVGLVVPHLIRMTL-GADHRWLLPASMLAGALALTLADWLARVVIVPAELPIGLV 292
Query: 323 TALIGAPIVVYVLFSKRK 340
T+L+G P +++L R+
Sbjct: 293 TSLVGGPFFLWLLARGRR 310
>gi|20092264|ref|NP_618339.1| iron ABC transporter, permease [Methanosarcina acetivorans C2A]
gi|19917501|gb|AAM06819.1| iron ABC transporter, permease [Methanosarcina acetivorans C2A]
Length = 377
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 154/291 (52%), Gaps = 11/291 (3%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVA-SVILLSG 111
IVW R P+ + L+AG GL V G MQ V +NP+A P LGIS+GA GVA + +L G
Sbjct: 95 IVWNIRFPRIVGGLLAGFGLGVCGCVMQAVLKNPMASPFTLGISAGAHFGVAVAAVLGVG 154
Query: 112 SIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAI 171
I G L +G A L + +I S + S TL++ G+ + Y+ +A+
Sbjct: 155 IISGPYL----LVGN-----AFLFAMLCSLFIISLSSLRGASSETLILAGIAVNYLFSAL 205
Query: 172 IGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGD 231
+F+YF+ +E +R V WG+G + S L + + LP +L LN++ GD
Sbjct: 206 SSLFQYFATDEQLRIMVSWGMGDLSAFSWRNFPLMFGLFAVCLPFIYLKAGDLNIMTAGD 265
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
AK+LG++ R R++ + + +L A + + G + F+GL PH+ R ++ S+HR L P
Sbjct: 266 ESAKSLGVDAHRIRIFSMLLASLLVATIVCFTGTIAFIGLVAPHMAR-MVIGSNHRYLFP 324
Query: 292 AAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKNE 342
A+ + G+ + + + + +P ++L+G P +Y++ +++ E
Sbjct: 325 ASGILGALILISADALGMNIIRPTIIPTGITSSLLGVPFFMYLILKRKRKE 375
>gi|15902979|ref|NP_358529.1| ABC transporter membrane-spanning permease - iron transport
[Streptococcus pneumoniae R6]
gi|15458544|gb|AAK99739.1| ABC transporter membrane-spanning permease - iron transport
[Streptococcus pneumoniae R6]
Length = 339
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 100/340 (29%), Positives = 176/340 (51%), Gaps = 15/340 (4%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
K+ + ++ I + ++ FL+L LG+ I +R ++I++K R+P+
Sbjct: 9 KQINLGIIFVICLGLLITIFLSLKLGTKEINIRDFLAAFGMGNTNDDFIKSIIYK-RIPR 67
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
+I A++AG+ L++SG+ MQ+V RNP+A P +LGI++GASL V + LS L
Sbjct: 68 TIFAILAGSSLAISGVLMQSVTRNPIADPGILGINTGASLSVV-----------IGLSFL 116
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVE 181
G I+ A G L + ++ K +T + + + V+ A+ + +
Sbjct: 117 GISSSISHISFAIIGGLVSAIFVYAIAVSGKAGLTPIKLALSGTCVSMALSSFVSFLILP 176
Query: 182 ED--IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGL 239
+ + + W +GS + + ++ + +I+ ++ + LN L +GD A LG+
Sbjct: 177 NNNVLDKFRFWQIGSLGAATLSSISTLLPFIILGHLIAIFISSDLNALAMGDEMAVGLGV 236
Query: 240 NIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSS 299
N+ R R I S +L + +TA GP+ F+GL VPH C GL + D R + ++ G+
Sbjct: 237 NVNRIRSLAIIASVLLCSSITAIGGPIGFVGLIVPHFC-GLFISKDIRTMTISSAFIGAE 295
Query: 300 LALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
L L+C++I RM G G + V ITA+IG P+++YV R
Sbjct: 296 LLLICDIIGRMLGKPGEIEVGIITAIIGGPVLIYVTMKNR 335
>gi|82778665|ref|YP_405014.1| putative permease of iron compound ABC transport system [Shigella
dysenteriae Sd197]
gi|2967535|gb|AAC27812.1| unknown [Shigella dysenteriae]
gi|81242813|gb|ABB63523.1| putative permease of iron compound ABC transport system [Shigella
dysenteriae Sd197]
Length = 318
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 92/294 (31%), Positives = 160/294 (54%), Gaps = 14/294 (4%)
Query: 49 VWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVIL 108
+W NI R+P+ + A++ GA L+ +G+ MQ +FRNP+A P +LG+SSG++L V I+
Sbjct: 35 IWLNI----RLPRVLLAVLVGAALATAGVIMQGLFRNPMADPGLLGVSSGSALMVGVAIV 90
Query: 109 LSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGS--VTLLIIGVMIGY 166
L S V + + A AG+L V T+I ++Q+ + + LL+ G+ I
Sbjct: 91 LPFSFPVVLVL-------YEQMVFAIAGSLVVCTIIFLITQRHRDGSMMQLLLAGIAINA 143
Query: 167 VANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNL 226
+ A IG+ Y E+ +R +W +G+ + + + ++ + + L TLNL
Sbjct: 144 LCGAAIGILSYIGDEQQLRQLTLWMMGNLGQAQWPTLLVASSFILPAIIATTCLAGTLNL 203
Query: 227 LLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDH 286
L LGD A LG+N+KR R ++ S +L + G + F+GL +PHL R + ++H
Sbjct: 204 LQLGDEEAHYLGVNVKRKRQQLLLVSSLLVGAAVSVSGIIGFIGLVIPHLIR-MTTGANH 262
Query: 287 RVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
R L+P + L G+ L L+ + +AR +PV +T+L+G P ++++ R+
Sbjct: 263 RWLIPCSALAGACLLLMADTLARTLVQPAEMPVGLLTSLLGGPYFMWLILRNRR 316
>gi|153897882|ref|ZP_02018449.1| transport system permease protein [Methylobacterium extorquens PA1]
gi|151591165|gb|EDN54572.1| transport system permease protein [Methylobacterium extorquens PA1]
Length = 896
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 105/347 (30%), Positives = 183/347 (52%), Gaps = 20/347 (5%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGS------AEEPVVWQNIV 54
++R + + + V+++ ++L +G +PL V+ ++ A +P Q +V
Sbjct: 560 VRRRLLPLAVLAPVALILLVLVSLGIGRYPVPLVDVFGVLVAKLFGQAPALDPAA-QTVV 618
Query: 55 WKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIG 114
R+P+ ALV GAGL+ +G Q +FRNPL P +LG+S+GASLG I+L+ +
Sbjct: 619 LNVRLPRVFGALVVGAGLAAAGATYQGLFRNPLVSPDILGVSAGASLGAVLGIVLALPVA 678
Query: 115 GVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGV 174
A+ L + G +A A A L+V ++ +TL++ GV +G + A I +
Sbjct: 679 --AIQGLAFAGGLAAVGAVYAVGLAV--------RRHDPVLTLVLAGVAVGALLGAGISL 728
Query: 175 FKYFSVE-EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
K + + A W LGS A V+ + + M + L LL +NL+ LGD
Sbjct: 729 LKVLADPYNQLPAITFWLLGSLASVTAGDIAAILPAMALGLAPLVLLRWRVNLMSLGDEE 788
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LG+ +R R +++ + ++TA V + G + ++GL VPH+ R LL D R L+PA+
Sbjct: 789 ARALGVETRRLRPLLVAGATLVTAAVVSVTGVIGWIGLIVPHVAR-LLVGPDFRRLLPAS 847
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+L G+ +L+AR +P+ +TAL+GAP +++L + ++
Sbjct: 848 MLLGAGYLTAVDLLARTVA-TIEVPLGILTALVGAPFFLWLLAAGKR 893
>gi|15900904|ref|NP_345508.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae TIGR4]
gi|14972507|gb|AAK75148.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae TIGR4]
Length = 339
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 100/340 (29%), Positives = 176/340 (51%), Gaps = 15/340 (4%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
K+ + ++ I + ++ FL+L LG+ I +R ++I++K R+P+
Sbjct: 9 KQINLGIIFIICLGLLITIFLSLKLGTKEINIRDFLAAFGMGNTNDDFIKSIIYK-RIPR 67
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
+I A++AG+ L++SG+ MQ+V RNP+A P +LGI++GASL V + LS L
Sbjct: 68 TIFAILAGSSLAISGVLMQSVTRNPIADPGILGINTGASLSVV-----------IGLSFL 116
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVE 181
G I+ A G L + ++ K +T + + + V+ A+ + +
Sbjct: 117 GISSSISHISFAIIGGLVSAIFVYAIAVSGKAGLTPIKLALSGTCVSMALSSFVSFLILP 176
Query: 182 ED--IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGL 239
+ + + W +GS + + ++ + +I+ ++ + LN L +GD A LG+
Sbjct: 177 NNNVLDKFRFWQIGSLGAATLSSISTLLPFIILGHLIAIFISSDLNALAMGDEMAVGLGV 236
Query: 240 NIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSS 299
N+ R R I S +L + +TA GP+ F+GL VPH C GL + D R + ++ G+
Sbjct: 237 NVNRIRSLAIIASVLLCSSITAIGGPIGFVGLIVPHFC-GLFISKDIRTMTISSSFIGAE 295
Query: 300 LALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
L L+C++I RM G G + V ITA+IG P+++YV R
Sbjct: 296 LLLICDIIGRMLGKPGEIEVGIITAIIGGPVLIYVTMKNR 335
>gi|153811050|ref|ZP_01963718.1| hypothetical protein RUMOBE_01441 [Ruminococcus obeum ATCC 29174]
gi|149832938|gb|EDM88021.1| hypothetical protein RUMOBE_01441 [Ruminococcus obeum ATCC 29174]
Length = 347
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 93/289 (32%), Positives = 153/289 (52%), Gaps = 14/289 (4%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
I W R+P+ ++AL GA LSV+G Q +FRNPL P +LG+SSGASLG A IL S
Sbjct: 70 IFWNIRLPRILSALFIGASLSVAGATYQGMFRNPLVSPDILGVSSGASLGAAFAILNGAS 129
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAII 172
+ LS A A + ++ +++L++ G MI + NA +
Sbjct: 130 NWMIQLS-----------AFAGGVAAVAASYLISRKSAHSQTLSLVLTGTMIMSLCNAGV 178
Query: 173 GVFKYFSVEEDI-RAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGD 231
+ KY + D+ + W +GS + + + MII L L F+ +NLL L +
Sbjct: 179 TMIKYVADPNDVLQQITFWLMGSLTKTTTKSFCWSVLPMIIGLSLIFIFRWQINLLTLDE 238
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
AK+LG+N+++ RL I S +L+A G + ++GL +PHL R L+ D+R L+P
Sbjct: 239 EEAKSLGINVRKYRLIFIVASTLLSAAAVCLGGLIGWVGLMIPHLARALVGV-DYRRLIP 297
Query: 292 AAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
A+ + G +L + I+R LP+ +T+++GAP +Y++ +++
Sbjct: 298 ASTILGGGYLILVDDISRSL-LSMELPLGVVTSIMGAPFFIYLIIKRKE 345
>gi|18478641|gb|AAL73226.1|AF338658_1 membrane permease PiaA [Streptococcus pneumoniae]
Length = 339
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 100/340 (29%), Positives = 176/340 (51%), Gaps = 15/340 (4%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
K+ + ++ I + ++ FL+L LG+ I +R ++I++K R+P+
Sbjct: 9 KQINLGIIFVICLGLLITIFLSLKLGTKEINIRDFLAAFGMGNTNDDFIKSIIYK-RIPR 67
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
+I A++AG+ L++SG+ MQ+V RNP+A P +LGI++GASL V + LS L
Sbjct: 68 TIFAILAGSSLAISGVLMQSVTRNPIADPGILGINTGASLSVV-----------IGLSFL 116
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVE 181
G I+ A G L + ++ K +T + + + V+ A+ + +
Sbjct: 117 GISSSISHISFAIIGGLVSAIFVYAIAVSGKAGLTPIKLALSGTCVSMALSSFVSFLILP 176
Query: 182 ED--IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGL 239
+ + + W +GS + + ++ + +I+ ++ + LN L +GD A LG+
Sbjct: 177 NNNVLDKFRFWQIGSLGAATLSSISTLLPFIILGHLIAIFISSDLNALAMGDEMAVGLGV 236
Query: 240 NIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSS 299
N+ R R I S +L + +TA GP+ F+GL VPH C GL + D R + ++ G+
Sbjct: 237 NVNRIRSLAIIASVLLCSSITAIGGPIGFVGLIVPHFC-GLFISKDIRTMTISSAFIGAE 295
Query: 300 LALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
L L+C++I RM G G + V ITA+IG P+++YV R
Sbjct: 296 LLLICDIIGRMLGKPGEIEVGIITAIIGGPVLIYVTMKNR 335
>gi|15804050|ref|NP_290086.1| putative permease of iron compound ABC transport system
[Escherichia coli O157:H7 EDL933]
gi|12518215|gb|AAG58647.1|AE005576_6 putative permease of iron compound ABC transport system
[Escherichia coli O157:H7 EDL933]
Length = 330
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 91/294 (30%), Positives = 159/294 (54%), Gaps = 14/294 (4%)
Query: 49 VWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVIL 108
+W NI R+P+ + A++ GA L+ +G+ MQ +FRNP+A P +LG+SSG++L V I+
Sbjct: 47 IWLNI----RLPRVLLAVLVGAALATAGVIMQGLFRNPMADPGLLGVSSGSALMVGVAIV 102
Query: 109 LSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGS--VTLLIIGVMIGY 166
L S V + + A AG+L V +I ++Q+ + + LL+ G+ I
Sbjct: 103 LPFSFPVVLVL-------YEQMVFAIAGSLVVCAIIFLITQRHRDGSMMQLLLAGIAINA 155
Query: 167 VANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNL 226
+ A IG+ Y E+ +R +W +G+ + + + ++ + + L TLNL
Sbjct: 156 LCGAAIGILSYIGDEQQLRQLTLWMMGNLGQAQWPTLLVASSFILPAIIATTCLAGTLNL 215
Query: 227 LLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDH 286
L LGD A LG+N+KR R ++ S +L + G + F+GL +PHL R + ++H
Sbjct: 216 LQLGDEEAHYLGVNVKRKRQQLLLVSSLLVGAAVSVSGIIGFIGLVIPHLIR-MTTGANH 274
Query: 287 RVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
R L+P + L G+ L L+ + +AR +PV +T+L+G P ++++ R+
Sbjct: 275 RWLIPCSALAGACLLLMADTLARTLVQPAEMPVGLLTSLLGGPYFMWLILRNRR 328
>gi|71279080|ref|YP_267908.1| putative vitamin B12 transport system permease protein BtuC
[Colwellia psychrerythraea 34H]
gi|71144820|gb|AAZ25293.1| putative vitamin B12 transport system permease protein BtuC
[Colwellia psychrerythraea 34H]
Length = 328
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 89/287 (31%), Positives = 158/287 (55%), Gaps = 12/287 (4%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
++W+ R+P+ + ALVAG GL+++G +Q RNPLA P + GI SGA LG
Sbjct: 51 VIWQVRIPRVLVALVAGMGLAIAGAILQNTTRNPLADPYLFGIVSGAGLGAT-------- 102
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAII 172
+A L IAL +AA GAL + ++VF+++ ++ LL+ GV + ++ +I
Sbjct: 103 ---IANISLADNLTIALPLAAFLGALFSVIIVVFIAKVLQRMEQLLLAGVAVSFMLASIT 159
Query: 173 GVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDG 232
YF + W +GS ARV + + I++I + F L + ++ LLLGD
Sbjct: 160 QFILYFGEPFATNRVIFWLMGSLARVEMSNFYVIASILLIAMITVFALHRQIDALLLGDE 219
Query: 233 YAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPA 292
A +LG+++ + RL ++ LTA + AYCG + F+GL +PH+ R L+ + ++++ +
Sbjct: 220 SAASLGVDVDKLRLLMLGICAALTATIVAYCGGIGFVGLMIPHIVRQLIGVTTLKLIIGS 279
Query: 293 AILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
A L G+ + ++IAR +P+ IT+ +G+ +++++ R
Sbjct: 280 A-LIGAIFLIWVDVIARSSLPHAEIPIGIITSALGSIFFLFIMYRSR 325
>gi|15613645|ref|NP_241948.1| ferrichrome ABC transporter (permease) [Bacillus halodurans C-125]
gi|10173697|dbj|BAB04801.1| ferrichrome ABC transporter (permease) [Bacillus halodurans C-125]
Length = 334
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 108/339 (31%), Positives = 175/339 (51%), Gaps = 13/339 (3%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVP 60
M R + I +SV I F ++L G+V IP V + G E + +++ R+P
Sbjct: 1 MNRRNMTYFIIVSVLIFITFIVSLNTGAVRIPPSDVLKTLIGMGSER--QELVLFSFRLP 58
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVI-LLSGSIGGVALS 119
+ + AL+ GAGL+++G +Q + RN LA P ++GI++GA L V I + GSI G++
Sbjct: 59 RMVLALLIGAGLAIAGTILQGITRNALADPGIIGINAGAGLAVVLFISFVQGSITGLSTF 118
Query: 120 KLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVT---LLIIGVMIGYVANAIIGVFK 176
+ + AL AATA L +++ KG VT L+++G+ I + +A I +F+
Sbjct: 119 NIFLMPLFALMGAATAAVL------IYLFALKKGEVTPTRLILVGIGIAGLFSAAILIFQ 172
Query: 177 YFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKN 236
D + IW G+ + + + + +++ LPL + LN+L LGD A
Sbjct: 173 LRMEPRDFMSATIWLTGAIWGANWSYVLSLLPWIVLFLPLVLYKARYLNVLNLGDPVAVG 232
Query: 237 LGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILT 296
LG ++ R +++ + L A G + FLGL PHL R ++ +H VL+PAA LT
Sbjct: 233 LGTQVESERRWLLFAAVALAGSCVAVGGAISFLGLIAPHLARRVV-GPNHYVLLPAAALT 291
Query: 297 GSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
GS L L + +AR +PV + A GAP +Y+L
Sbjct: 292 GSLLLLFADFVARHLLAPNEIPVGIVVAFFGAPYFIYLL 330
>gi|116516465|ref|YP_816394.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae D39]
gi|116077041|gb|ABJ54761.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae D39]
Length = 335
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 100/340 (29%), Positives = 176/340 (51%), Gaps = 15/340 (4%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
K+ + ++ I + ++ FL+L LG+ I +R ++I++K R+P+
Sbjct: 5 KQINLGIIFVICLGLLITIFLSLKLGTKEINIRDFLAAFGMGNTNDDFIKSIIYK-RIPR 63
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
+I A++AG+ L++SG+ MQ+V RNP+A P +LGI++GASL V + LS L
Sbjct: 64 TIFAILAGSSLAISGVLMQSVTRNPIADPGILGINTGASLSVV-----------IGLSFL 112
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVE 181
G I+ A G L + ++ K +T + + + V+ A+ + +
Sbjct: 113 GISSSISHISFAIIGGLVSAIFVYAIAVSGKAGLTPIKLALSGTCVSMALSSFVSFLILP 172
Query: 182 ED--IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGL 239
+ + + W +GS + + ++ + +I+ ++ + LN L +GD A LG+
Sbjct: 173 NNNVLDKFRFWQIGSLGAATLSSISTLLPFIILGHLIAIFISSDLNALAMGDEMAVGLGV 232
Query: 240 NIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSS 299
N+ R R I S +L + +TA GP+ F+GL VPH C GL + D R + ++ G+
Sbjct: 233 NVNRIRSLAIIASVLLCSSITAIGGPIGFVGLIVPHFC-GLFISKDIRTMTISSAFIGAE 291
Query: 300 LALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
L L+C++I RM G G + V ITA+IG P+++YV R
Sbjct: 292 LLLICDIIGRMLGKPGEIEVGIITAIIGGPVLIYVTMKNR 331
>gi|147918916|ref|YP_687358.1| putative ABC-type transport system, permease component [uncultured
methanogenic archaeon RC-I]
gi|110622754|emb|CAJ38032.1| putative ABC-type transport system, permease component [uncultured
methanogenic archaeon RC-I]
Length = 348
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 95/293 (32%), Positives = 163/293 (55%), Gaps = 15/293 (5%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLS 110
+ IV R+P+ I L+ GA L+V+G+ Q +F+NP+A P +LG+SSGA+ G ++VI+L
Sbjct: 63 EAIVINVRLPRVILGLLVGASLAVAGVTTQGIFKNPMADPYILGVSSGAAFGASAVIVLG 122
Query: 111 GSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV---TLLIIGVMIGYV 167
S+ ++ I++T A AGAL +++ +VF + + + TLL+ G+ +
Sbjct: 123 VSV---------FLQSISITAGALAGAL-IVSFLVFNIARTRNRIPVETLLLSGIAVSAF 172
Query: 168 ANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLL 227
+AI Y S + V W +G+ + + + + + + + + LNL+
Sbjct: 173 FSAITSFLMYIS-GNSLNQIVFWVMGALWSSNWDDVLILAPFFVAGSLIVYAYSRDLNLM 231
Query: 228 LLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHR 287
LLGD A +LG ++ R + ++ S ++ A + G + F+GL +PH+ R L+ DHR
Sbjct: 232 LLGDESAAHLGSDVTRVKYILLGVSSLMAAAAVSVTGIIGFVGLIIPHIMR-LIVGPDHR 290
Query: 288 VLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
VL+PA+ L G+ +L + ARM +PV +TALIGAP VY+L ++K
Sbjct: 291 VLIPASALVGAIFLVLADTFARMVIQPTEMPVGIVTALIGAPFFVYLLIRQKK 343
>gi|49474051|ref|YP_032093.1| Hemin ABC transporter, permease protein [Bartonella quintana str.
Toulouse]
gi|49239555|emb|CAF25912.1| Hemin ABC transporter, permease protein [Bartonella quintana str.
Toulouse]
Length = 365
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 92/286 (32%), Positives = 157/286 (54%), Gaps = 10/286 (3%)
Query: 58 RVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVA 117
R+P+ I ++ GA L+VSG+ MQ +FRNPLA P ++G+S+GASLG I++ G+A
Sbjct: 81 RLPRIILGVLVGAALAVSGVLMQGLFRNPLADPGIIGVSAGASLGAILAIVV-----GIA 135
Query: 118 L--SKLGYIGEIALTIAAT-AGALSVMTLIVFVSQKVKGSV-TLLIIGVMIGYVANAIIG 173
S ++ + I A G LS + L ++ S+ T+L+ G+ +G ++ A++G
Sbjct: 136 FPSSLAPFLEPYKVIIGAFFGGLLSTLILYAIATRHSYTSIATMLLAGIALGALSGAVVG 195
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
+ + + ++ +R W LGS A + ++ L + + L S L + LN L LG+
Sbjct: 196 MLIFIANDQQLRDITFWNLGSLAGATWLKVWLVFPFICVGLIFSPFLSRALNALALGEAV 255
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A ++G I+R + I ++ A G + F+G+ VPH+ R L+ DHR L+P +
Sbjct: 256 AGHIGFYIQRVKNIAIFLVALMCGSAVAVSGGIGFIGIVVPHILRQLI-GPDHRYLIPCS 314
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
L G++L + + AR+ LP+ +TAL GAP +++L KR
Sbjct: 315 ALLGATLLIFADTFARLIVAPAELPIGIVTALFGAPFFLWILICKR 360
>gi|148984988|ref|ZP_01818231.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP3-BS71]
gi|148988486|ref|ZP_01819933.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP6-BS73]
gi|148994229|ref|ZP_01823522.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP9-BS68]
gi|149003896|ref|ZP_01828719.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP14-BS69]
gi|149012973|ref|ZP_01833862.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP19-BS75]
gi|149019630|ref|ZP_01834949.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP23-BS72]
gi|147758126|gb|EDK65130.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP14-BS69]
gi|147763126|gb|EDK70067.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP19-BS75]
gi|147922686|gb|EDK73803.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP3-BS71]
gi|147926167|gb|EDK77241.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP6-BS73]
gi|147927370|gb|EDK78401.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP9-BS68]
gi|147931005|gb|EDK81985.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP23-BS72]
Length = 335
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 100/340 (29%), Positives = 176/340 (51%), Gaps = 15/340 (4%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
K+ + ++ I + ++ FL+L LG+ I +R ++I++K R+P+
Sbjct: 5 KQINLGIIFVICLGLLITIFLSLKLGTKEINIRDFLAAFGMGNTNDDFIKSIIYK-RIPR 63
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
+I A++AG+ L++SG+ MQ+V RNP+A P +LGI++GASL V + LS L
Sbjct: 64 TIFAILAGSSLAISGVLMQSVTRNPIADPGILGINTGASLSVV-----------IGLSFL 112
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVE 181
G I+ A G L + ++ K +T + + + V+ A+ + +
Sbjct: 113 GISSSISHISFAIIGGLVSAIFVYAIAVSGKAGLTPIKLALSGTCVSMALSSFVSFLILP 172
Query: 182 ED--IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGL 239
+ + + W +GS + + ++ + +I+ ++ + LN L +GD A LG+
Sbjct: 173 NNNVLDKFRFWQIGSLGAATLSSISTLLPFIILGHLIAIFISSDLNALAMGDEMAVGLGV 232
Query: 240 NIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSS 299
N+ R R I S +L + +TA GP+ F+GL VPH C GL + D R + ++ G+
Sbjct: 233 NVNRIRSLAIIASVLLCSSITAIGGPIGFVGLIVPHFC-GLFISKDIRTMTISSSFIGAE 291
Query: 300 LALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
L L+C++I RM G G + V ITA+IG P+++YV R
Sbjct: 292 LLLICDIIGRMLGKPGEIEVGIITAIIGGPVLIYVTMKNR 331
>gi|148269870|ref|YP_001244330.1| transport system permease protein [Thermotoga petrophila RKU-1]
gi|61657407|emb|CAI44323.1| hypothetical protein [Thermotoga petrophila]
gi|147735414|gb|ABQ46754.1| transport system permease protein [Thermotoga petrophila RKU-1]
Length = 344
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 89/296 (30%), Positives = 157/296 (53%), Gaps = 13/296 (4%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILL- 109
Q ++W R P+ + ++ GA L+VSG MQ V +NPLA P G S GA G + I L
Sbjct: 55 QLVIWSVRFPRVVAGILVGASLAVSGAVMQGVLKNPLASPFTTGTSHGAMFGASLAIALG 114
Query: 110 ---SGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV--TLLIIGVMI 164
S S G V L+ + + A GA+S +L++F+ K+K ++++GV +
Sbjct: 115 AGYSESTGSVTLNN-----PYTIALFAFLGAMS-SSLVIFLMGKLKEITPEAMVLMGVAM 168
Query: 165 GYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTL 224
G + A + +YF+ + ++ V W G R + + + + + + + +
Sbjct: 169 GSLFTAATALIQYFADDLELATMVYWSFGDLGRTTWRENIILLVVFLTVFAYFLWKAWDI 228
Query: 225 NLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTS 284
N +++GD AK+ G+ +++ RL ++ S +LTAI A+ G + F+GL PH+ R +
Sbjct: 229 NAMVVGDEIAKSTGIEVEKVRLILVVLSTLLTAISVAFVGIIGFIGLLAPHMMR-IFFGE 287
Query: 285 DHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
D+R L+P + L GS L L + +AR+ LPV +T+ +GAP+ +Y+L ++
Sbjct: 288 DYRFLIPLSALCGSVLLLSADTVARVLLSPTVLPVGIVTSFLGAPLFIYLLLQSKE 343
>gi|20090098|ref|NP_616173.1| iron(III) ABC transporter, permease protein [Methanosarcina
acetivorans C2A]
gi|19915075|gb|AAM04653.1| iron(III) ABC transporter, permease protein [Methanosarcina
acetivorans C2A]
Length = 343
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 92/293 (31%), Positives = 159/293 (54%), Gaps = 19/293 (6%)
Query: 46 EPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVAS 105
+P ++ +VW R+P+ I A++ GA LS+SG Q F+NPL P +LG+SSGA G A
Sbjct: 59 DPTIY-TVVWDIRLPRIIAAMIVGAALSISGASFQGTFQNPLVSPDILGVSSGAGFGAAI 117
Query: 106 VILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLII--GVM 163
IL S S+ + + A L + L F+S++ KG+ L+++ G+
Sbjct: 118 AILFSFSM-------------VMIQTTAFLFGLLAVFLTYFLSKRFKGNTVLMMVLGGIA 164
Query: 164 IGYVANAIIGVFKYFS-VEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIK 222
I + +A+I KY + + + V W +GS + V + + + +++ L+
Sbjct: 165 IAALFSALISCIKYLADPDSKLPEIVYWLMGSLSAVESSSILMIAGPVLVGFTALLLIGW 224
Query: 223 TLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLR 282
+N+L + D A++LG+N ++ RL +I C +LTA + G + ++GL +PH R ++
Sbjct: 225 RINVLSMSDDEARSLGINTEKMRLLIIFCCTLLTAAAVSISGIIGWVGLVIPHAAR-MIV 283
Query: 283 TSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
DHR L+PA+I G++ LL + + R +P+ +TA+IGAP VY+L
Sbjct: 284 GPDHRKLLPASISLGAAFLLLVDDVCRT-ATSIEIPLGILTAIIGAPFFVYLL 335
>gi|15833640|ref|NP_312413.1| putative hemin permease [Escherichia coli O157:H7 str. Sakai]
gi|13363860|dbj|BAB37809.1| putative hemin permease [Escherichia coli O157:H7 str. Sakai]
Length = 318
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 91/294 (30%), Positives = 159/294 (54%), Gaps = 14/294 (4%)
Query: 49 VWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVIL 108
+W NI R+P+ + A++ GA L+ +G+ MQ +FRNP+A P +LG+SSG++L V I+
Sbjct: 35 IWLNI----RLPRVLLAVLVGAALATAGVIMQGLFRNPMADPGLLGVSSGSALMVGVAIV 90
Query: 109 LSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGS--VTLLIIGVMIGY 166
L S V + + A AG+L V +I ++Q+ + + LL+ G+ I
Sbjct: 91 LPFSFPVVLVL-------YEQMVFAIAGSLVVCAIIFLITQRHRDGSMMQLLLAGIAINA 143
Query: 167 VANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNL 226
+ A IG+ Y E+ +R +W +G+ + + + ++ + + L TLNL
Sbjct: 144 LCGAAIGILSYIGDEQQLRQLTLWMMGNLGQAQWPTLLVASSFILPAIIATTCLAGTLNL 203
Query: 227 LLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDH 286
L LGD A LG+N+KR R ++ S +L + G + F+GL +PHL R + ++H
Sbjct: 204 LQLGDEEAHYLGVNVKRKRQQLLLVSSLLVGAAVSVSGIIGFIGLVIPHLIR-MTTGANH 262
Query: 287 RVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
R L+P + L G+ L L+ + +AR +PV +T+L+G P ++++ R+
Sbjct: 263 RWLIPCSALAGACLLLMADTLARTLVQPAEMPVGLLTSLLGGPYFMWLILRNRR 316
>gi|85858075|ref|YP_460277.1| ABC-type Fe3+-siderophore transport system, permease component
[Syntrophus aciditrophicus SB]
gi|85721166|gb|ABC76109.1| ABC-type Fe3+-siderophore transport system, permease component
[Syntrophus aciditrophicus SB]
Length = 350
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 92/289 (31%), Positives = 167/289 (57%), Gaps = 14/289 (4%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
I++ R+P+ + A + GA LS +G+ Q + RNPLA P +LGIS G++LG + G
Sbjct: 68 ILFSLRLPRILFAGLVGASLSTAGVIFQALLRNPLADPYILGISGGSALGA-----IIGI 122
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKG--SVTLLIIGVMIGYVANA 170
G+A+ LG + + A GA + L++ VKG S T+L+ GV++ +A
Sbjct: 123 SAGMAVLPLG------VPLPAFLGAAVTVILVLAAGGSVKGFSSGTMLLAGVIVNAFFSA 176
Query: 171 IIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLG 230
+I + S D++ + W +G+ + ++ L +++ +++L +++NL+ LG
Sbjct: 177 LIMLVLSLSSHADLQKVIFWLMGNLSLAEPGEILLTGLVLLAGFSIAWLHARSINLISLG 236
Query: 231 DGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLM 290
+ A +LG+ ++R R+ ++ +LTA+ ++ G V F+GL +PH+ R LL +DHR+L+
Sbjct: 237 EETAIHLGVAVERTRMILLLSGSLLTAVAVSFSGTVGFVGLIIPHMMRMLL-GADHRLLL 295
Query: 291 PAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
PA++L G+S ++ + +AR + LPV +TAL G+P +Y+L R
Sbjct: 296 PASLLFGASFLIVADTLARTAIPDMELPVGVVTALCGSPYFLYLLRKGR 344
>gi|146310239|ref|YP_001175313.1| transport system permease protein [Enterobacter sp. 638]
gi|145317115|gb|ABP59262.1| transport system permease protein [Enterobacter sp. 638]
Length = 357
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 92/320 (28%), Positives = 180/320 (56%), Gaps = 13/320 (4%)
Query: 23 NLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTV 82
+ LG I + ++W+ + +A + IVW R+P ++ A+V G L ++G +MQT+
Sbjct: 45 DFTLGPSGISVATLWHTLFDAASADAGTRVIVWDLRLPFALMAVVVGLALGLAGAEMQTI 104
Query: 83 FRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMT 142
NPLA P LG+SS AS G A I+L I GV + +++ A AL
Sbjct: 105 LNNPLASPFTLGVSSAASFGAALAIILGLGIPGVP-------DQWFISVNAFVFALMACF 157
Query: 143 LIVFVSQKVKGSVT-LLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGN 201
++ +S+ + + + +++ G+ + + NA+I + ++ + E+ ++ V W +GS AR S +
Sbjct: 158 ILDGISRWTRVATSGVVLFGIALVFTFNALISILQFVASEDTLQGLVFWTMGSLARASWD 217
Query: 202 QMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTA 261
++ + + +++I++PLS L L LG+ A + G+N+++ RL + I++A+ A
Sbjct: 218 KLAILVVVLLIVVPLSLKNAWKLTALRLGEDRAVSFGINVRKLRLTTLLRISIISALTVA 277
Query: 262 YCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIAR--MPGFEGALPV 319
+ GP+ F+GL PH+ R ++ DHR +P ++L G+ + L +++++ +PG +PV
Sbjct: 278 FVGPIGFIGLVAPHISR-MMFGEDHRFYLPGSMLIGALVLSLASVLSKNIVPGV--IIPV 334
Query: 320 NSITALIGAPIVVYVLFSKR 339
+T+L+G P + ++ R
Sbjct: 335 GIVTSLVGVPFFLSIIIRHR 354
>gi|77962220|ref|ZP_00826043.1| COG4139: ABC-type cobalamin transport system, permease component
[Yersinia mollaretii ATCC 43969]
Length = 335
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 91/286 (31%), Positives = 155/286 (54%), Gaps = 13/286 (4%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLS 110
Q VW+ R+P+++ ++ GA L+VSG MQ +F NPLA P +LG+++GA + + +LL
Sbjct: 55 QLFVWQLRLPRALAVMMVGASLAVSGAVMQALFENPLAEPGLLGVANGAGVALVMAVLLG 114
Query: 111 GSIGGVALSKLGYIGEIALTIAATAGAL-SVMTLIVFVSQKVKGSVTLLIIGVMIGYVAN 169
+ + L+ A GAL M L+ F ++ + LL++GV +G V +
Sbjct: 115 HGLLPIWF----------LSACAIVGALFMTMLLLGFARRRRLTNARLLLVGVALGIVCS 164
Query: 170 AIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLL 229
AI+ YFS D+R + W +G F+ + Q L ++ I++ L + LN + L
Sbjct: 165 AIMTWAVYFSTSLDLRQLMYWMMGGFSGIDWRQQGLVFALLPIVIWLC-CQGRVLNFMSL 223
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A+ LG+ + R ++ G+L I A G + F+GL +PH+ R L +D R L
Sbjct: 224 GEQQARQLGIPLHLWRNLLVLAIGLLVGISVALAGVISFIGLVIPHILR-LTGLTDQRRL 282
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
+ L G + LL ++IAR+ F LP+ +TA +G+P+ +++L
Sbjct: 283 LVGCALAGGGVLLLADVIARIALFSAELPIGVVTATLGSPLFIWLL 328
>gi|154496812|ref|ZP_02035508.1| hypothetical protein BACCAP_01105 [Bacteroides capillosus ATCC
29799]
gi|150274064|gb|EDN01164.1| hypothetical protein BACCAP_01105 [Bacteroides capillosus ATCC
29799]
Length = 360
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 107/330 (32%), Positives = 173/330 (52%), Gaps = 26/330 (7%)
Query: 24 LVLGSVHIPLRSVWNIVCGS---AEEPVVW------QNIVWKSRVPQSITALVAGAGLSV 74
+ G++ +P+ V+ ++ + +P VW ++V R+P+ + A+ GAGLSV
Sbjct: 35 VTFGTIALPVGDVYRVIGYALLGVGDPAVWGPGTAIHDVVLLIRLPRLVLAVAVGAGLSV 94
Query: 75 SGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAAT 134
G MQ V +NPLA P VLGISSGASLG ++ ILL G AL GY+G I
Sbjct: 95 CGAVMQAVVKNPLADPYVLGISSGASLGASAAILLG---VGAALGS-GYVG-----IVGA 145
Query: 135 AGALSVMTLIVFVSQ--KVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVI-WG 191
GA +V +V ++ +V LL+ G + V A+ YF+ + V+ W
Sbjct: 146 LGAFAVSLAVVAIANIGGRANAVKLLLAGTALSSVCGALSNFIIYFADNDHALTQVVHWS 205
Query: 192 LGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISC 251
+GS A + ++++ + + + LNL+LLGD A LG ++ R RL +
Sbjct: 206 MGSMAAADWESNCIIGAVVLLGVLFFWSQARNLNLMLLGDETAITLGTDMHRWRLLYLLV 265
Query: 252 SGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIAR-- 309
S + V G + F+GL +PH+ R + T DHR L+P + L G+ L +++ R
Sbjct: 266 SSAMIGFVVYKAGMIGFVGLVIPHVVRMIFGT-DHRKLIPLSALLGALFLLWADVLCRVV 324
Query: 310 MPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+PG E LP+ +TA++GAP+ +Y++ K+
Sbjct: 325 LPGNE--LPIGILTAMVGAPVFIYLMIRKQ 352
>gi|15891255|ref|NP_356927.1| hypothetical protein AGR_L_2295 [Agrobacterium tumefaciens str.
C58]
gi|17937397|ref|NP_534186.1| ABC transporter, membrane spanning protein [iron (III) dicitrate]
[Agrobacterium tumefaciens str. C58]
gi|15159624|gb|AAK89712.1| AGR_L_2295p [Agrobacterium tumefaciens str. C58]
gi|17742111|gb|AAL44502.1| ABC transporter, membrane spanning protein [iron (III) dicitrate]
[Agrobacterium tumefaciens str. C58]
Length = 336
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 103/316 (32%), Positives = 166/316 (52%), Gaps = 13/316 (4%)
Query: 24 LVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVF 83
++ G I R V N + GSA P IV + R+ +++ AL+AG GL+V+G QTV
Sbjct: 32 MIWGDQSIAWRDVANALVGSA--PADLHMIVIEFRLSRAMLALLAGTGLAVAGTISQTVM 89
Query: 84 RNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTL 143
RNPLA P VLGI++GA+L + VI+L + L G+ G A+T+AAT AL+
Sbjct: 90 RNPLAEPGVLGINAGAALVASVVIILFADVSPTILPWAGFAG--AVTMAATVYALA---- 143
Query: 144 IVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQM 203
++ S+ ++++G+ + +A A F D++ +IW GS ++
Sbjct: 144 ----WKRGTSSLRIILVGIGLSAMAGAGTSFLTAFGNVMDVQRAMIWLSGSVYGADWTKV 199
Query: 204 TLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYC 263
+ + + L L++ + L+L+ GD A LG + R ++I +++ A
Sbjct: 200 KSLLLWLSVPLALTWFSCRQLDLIRFGDDVATGLGQKVNLVRAFLILLCTLISGATVAMV 259
Query: 264 GPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSIT 323
G V F+GL PH+ R ++ + HR L+P A LTGS L L+ ++I R LP +T
Sbjct: 260 GLVGFVGLIAPHVARRIVGPA-HRALIPVAALTGSLLLLVADIIGRTVIAPAQLPAGIVT 318
Query: 324 ALIGAPIVVYVLFSKR 339
AL+GAP Y+L +R
Sbjct: 319 ALLGAPFFAYLLKGRR 334
>gi|118065822|ref|ZP_01534082.1| transport system permease protein [Serratia proteamaculans 568]
gi|118019561|gb|EAV33473.1| transport system permease protein [Serratia proteamaculans 568]
Length = 360
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 99/339 (29%), Positives = 182/339 (53%), Gaps = 7/339 (2%)
Query: 3 RYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQS 62
R+ +L++ ++++I+ L+ LG + L S+W + A + IVW R+P +
Sbjct: 28 RHRLLMMGVLALAILGSLLLDFTLGPSGLSLSSLWQTLIDPAAADAGTRVIVWDIRLPYA 87
Query: 63 ITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLG 122
+ A+V G L ++G +MQT+ NPLA P LG+SS A+ G A I+L IG +
Sbjct: 88 LMAVVVGFALGLAGAEMQTILNNPLASPFTLGVSSAAAFGAALAIVLG--IGVPGIPDQW 145
Query: 123 YIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEE 182
+I A A A AL + + + G V + G+ + + NA++ + ++ + E+
Sbjct: 146 FISANAFIFALFA-ALMLDGITRWTRVATSGVV---LFGIALVFTFNALVSMMQFIASED 201
Query: 183 DIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIK 242
++ V W +GS AR S +++ + + + +LLPLS + L L LG+ A + G++++
Sbjct: 202 TLQGLVFWTMGSLARASWDKLGILLGVFAVLLPLSMMSSWKLTALRLGEDRAVSFGIDVR 261
Query: 243 RARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLAL 302
R RL + IL+A+ A+ GP+ F+GL PH+ R ++ DHR +PA+ L G+ +
Sbjct: 262 RLRLTTLLRISILSALAVAFVGPIGFIGLVAPHIAR-MIFGEDHRFYLPASALIGALVLS 320
Query: 303 LCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKN 341
+ ++ ++ +PV +T+L+G P + ++ R N
Sbjct: 321 MASVASKNLIPGIIIPVGIVTSLVGVPFFLSIILRHRGN 359
>gi|15642963|ref|NP_228005.1| iron(III) ABC transporter, permease protein, putative [Thermotoga
maritima MSB8]
gi|4980686|gb|AAD35282.1|AE001704_3 iron(III) ABC transporter, permease protein, putative [Thermotoga
maritima MSB8]
Length = 344
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 154/291 (52%), Gaps = 11/291 (3%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILL- 109
Q ++W R P+ +T ++ GA L+VSG MQ V +NPLA P G S GA G + I L
Sbjct: 55 QLVIWSVRFPRVVTGILVGASLAVSGAVMQGVLKNPLASPFTTGTSHGAMFGASLAIALG 114
Query: 110 ---SGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQ-KVKGSVTLLIIGVMIG 165
S S G V L+ + + A GA+S +I+ + + K ++++GV +G
Sbjct: 115 AGYSESTGSVTLNN-----PYTIALFAFLGAMSSSLVILLIGKLKEITPEAIVLMGVAMG 169
Query: 166 YVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLN 225
+ A + +YF+ + ++ V W G R + + + + I + + +N
Sbjct: 170 SLFTAATTLIQYFADDLELATMVYWSFGDLGRTTWRENLILLVIFLTVFAYFLWKAWDIN 229
Query: 226 LLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSD 285
+++GD AK+ G+ +++ RL ++ S +LTAI A+ G + F+GL PH+ R +L D
Sbjct: 230 AMVVGDEIAKSTGIEVEKVRLILVVLSTLLTAISVAFVGIIGFIGLLAPHMMR-ILFGED 288
Query: 286 HRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
+R L+P + L GS L L + +AR+ LPV +T+ +GAP+ +Y+L
Sbjct: 289 YRFLIPLSALCGSVLLLSADTVARVLLSPTVLPVGIVTSFLGAPLFIYLLL 339
>gi|88860912|ref|ZP_01135548.1| Hemin ABC-transport system permease [Pseudoalteromonas tunicata D2]
gi|88817125|gb|EAR26944.1| Hemin ABC-transport system permease [Pseudoalteromonas tunicata D2]
Length = 351
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 107/335 (31%), Positives = 180/335 (53%), Gaps = 13/335 (3%)
Query: 7 LVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITAL 66
L + F+ +F + L +G++ +P + ++ E P + ++W R+P+ + +
Sbjct: 17 LFIPFLVCLALFISVIGLKVGAISMPWSELVTVL-SKGEAPNLADAVIWHIRLPRLVLCI 75
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGE 126
+ GA L SG MQ +FRNPLA P ++G++ GA+LG S+I+L GS V S++ I
Sbjct: 76 LVGASLGASGAAMQAIFRNPLADPGLIGVAGGAALGAVSIIVL-GSSFLVGFSEVFAI-- 132
Query: 127 IALTIAATAGALSVMTLIVFVSQKVK--GSVTLLIIGVMIGYVANAIIGVFKYFSVEEDI 184
A+ + A GAL V I +S V+LL+ G+ + + ++IG+ S ++ +
Sbjct: 133 YAVPMGAFLGALIVCGFIYRLSSHSGEFTIVSLLLAGIAVNAIVGSLIGLLTLISNDQQL 192
Query: 185 RAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIK---TLNLLLLGDGYAKNLGLNI 241
R W +GS A GN + + +I++ LIK +LN+ LLG+ AK+LGL++
Sbjct: 193 RDLTFWSMGSLA---GNSWQMIAPVAVIIILSCCALIKCSLSLNVYLLGEAQAKHLGLDV 249
Query: 242 KRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLA 301
+ + V C+ + + G + F+G VPHL R LL DHR LMPA++L G+ L
Sbjct: 250 VKLKKQVFFCTALCLGAAVSITGVIGFVGFIVPHLVR-LLMGPDHRYLMPASMLLGAILL 308
Query: 302 LLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
+ +L+AR LP+ +T+ IG P + +LF
Sbjct: 309 SMADLLARTLILPAELPIGLLTSAIGGPFFLIMLF 343
>gi|149179882|ref|ZP_01858387.1| ferric ion ABC transpoter (permease) [Bacillus sp. SG-1]
gi|148852074|gb|EDL66219.1| ferric ion ABC transpoter (permease) [Bacillus sp. SG-1]
Length = 320
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 93/294 (31%), Positives = 158/294 (53%), Gaps = 13/294 (4%)
Query: 49 VWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVIL 108
++ NIV+ R+P+ I A + GA L+++G Q + RNPLA P LGISSGAS+G +
Sbjct: 36 MYINIVYSIRLPRVILAFLVGASLAIAGAAFQGLLRNPLADPYTLGISSGASVGAVMTLF 95
Query: 109 LSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVA 168
SI +G L + + A + +++ +QKV+ S+ L I ++ G +
Sbjct: 96 FHISI--------PILGNFTLPVLSIITATVTIFIVLLFAQKVERSMKLETI-ILTGIIF 146
Query: 169 NAIIGVFKYFSVE---EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLN 225
++ +G F + +++R + W LGS + + + + + + L + + LN
Sbjct: 147 SSFLGSFISLMIALTGDELRQIIGWLLGSVSMRGWDYIKIILPFFTVGTILLLMNTRELN 206
Query: 226 LLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSD 285
+ G+ A+++G+N++ +L ++ ILT A G + F+GL +PHL R L+ +D
Sbjct: 207 GMSFGEEQAQHIGINVQARKLVILLAGSILTGAAVAVSGTIGFVGLVIPHLIR-LISGND 265
Query: 286 HRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
HR L+P +I+ G +L +LI+R LP+ ITALIGAPI Y+L KR
Sbjct: 266 HRHLLPLSIMAGGGFLVLADLISRTIIAPTELPIGVITALIGAPIFAYILMKKR 319
>gi|154504376|ref|ZP_02041114.1| hypothetical protein RUMGNA_01880 [Ruminococcus gnavus ATCC 29149]
gi|153795305|gb|EDN77725.1| hypothetical protein RUMGNA_01880 [Ruminococcus gnavus ATCC 29149]
Length = 353
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 92/293 (31%), Positives = 155/293 (52%), Gaps = 12/293 (4%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLG-VASVILL 109
+ I+W R+P+ + A GAGLSV G+ MQ + +N LA P VLGISSGAS G V ++I
Sbjct: 67 ETIIWNIRLPRVVLAWFVGAGLSVCGVLMQALTKNALADPYVLGISSGASAGAVCAIITG 126
Query: 110 SGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVAN 169
G + G I AL I V+++ + + S L++ G+ + +
Sbjct: 127 CFHFAGGYGTMFGAICGAALAI--------VLSMAIATYKGTVTSTQLILAGIATSALFS 178
Query: 170 AIIG--VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLL 227
I ++ Y + + + W +GS + S ++ +I + + L + L++L
Sbjct: 179 GITNLIIYGYHTGSDKTKTAQYWMVGSLSGASWEKVKYVAAAFLITVCIILLFTRELDML 238
Query: 228 LLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHR 287
LLGDG A+NLG+N+ R ++ VI + +LT IV + G + F+GL VPH+ R ++ S H
Sbjct: 239 LLGDGTAENLGVNVTRIKMVVIIMAAVLTGIVVSVSGVIGFIGLVVPHIARRMV-GSRHT 297
Query: 288 VLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+++P I+ G +L + ++R+ LP+ I AL GAP +Y++ R+
Sbjct: 298 IVLPFVIVLGGLFTVLADFLSRVIVAPEELPIGIIAALSGAPFFLYLIRRGRR 350
>gi|15891544|ref|NP_357216.1| hypothetical protein AGR_L_2865 [Agrobacterium tumefaciens str.
C58]
gi|17937097|ref|NP_533886.1| ABC transporter, membrane spanning protein [iron] [Agrobacterium
tumefaciens str. C58]
gi|15159970|gb|AAK90001.1| AGR_L_2865p [Agrobacterium tumefaciens str. C58]
gi|17741781|gb|AAL44202.1| ABC transporter, membrane spanning protein [iron] [Agrobacterium
tumefaciens str. C58]
Length = 355
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 99/338 (29%), Positives = 176/338 (52%), Gaps = 13/338 (3%)
Query: 6 VLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITA 65
+L+L+ + +++ F ++ LG L V + A + ++W R+P ++ A
Sbjct: 25 ILILVGLFLALCFSMAADMALGPARYTLSEVLATIADPAAVGNQLRVVIWDIRMPIALMA 84
Query: 66 LVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVAL--SKLGY 123
+ GA LSV+G QMQT+ NPLA P LGIS+ AS +GGVA+ + Y
Sbjct: 85 VTVGASLSVAGAQMQTILSNPLASPFTLGISA-----AASFGAALALVGGVAIFPGAVHY 139
Query: 124 IGEIALTIAATAGALSVMTLIVFVSQKVKGSV-TLLIIGVMIGYVANAIIGVFKYFSVEE 182
+ I I A AL I F S +V T++++G+ + + NA + + +Y + E+
Sbjct: 140 MVPINAFIMAMIAAL----FIHFASTMRGVTVETIVLLGIALVFTFNAALSLLEYLASEQ 195
Query: 183 DIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIK 242
+ A V W +GS + + +++ + I+++ +PL L L LGD A ++G+N++
Sbjct: 196 ALAAVVFWTMGSLTKATWDKVYITAAILVVTVPLFMRQAWALTALRLGDDKAASMGINVR 255
Query: 243 RARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLAL 302
R RL + +L AI ++ G + F+GL PH+ R ++ D R +P +I+ G+ L
Sbjct: 256 RLRLTTMLTVSLLAAIPVSFVGTIGFVGLVGPHIAR-MVVGEDQRFFLPGSIICGALLLS 314
Query: 303 LCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
++I+++ LP+ ITAL+G P ++F R+
Sbjct: 315 ATSVISKILIPGAILPIGVITALVGVPFFFALIFGNRR 352
>gi|28872668|ref|NP_795287.1| haemin ABC transporter, permease protein, putative [Pseudomonas
syringae pv. tomato str. DC3000]
gi|28855924|gb|AAO58982.1| haemin ABC transporter, permease protein, putative [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 346
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 99/322 (30%), Positives = 171/322 (53%), Gaps = 21/322 (6%)
Query: 24 LVLGSVHIPLRSVWNIVC----GSAEEPVVW----QNIVWKSRVPQSITALVAGAGLSVS 75
+ G+ +PL V +I+ G+A+ P +W + IVW R P+ + ++AGAGL++
Sbjct: 33 ITFGAAPVPLNRVMDILMFKLFGTAQTPPLWTAGQETIVWLIRTPRVLLGVLAGAGLALI 92
Query: 76 GLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATA 135
G +Q RNPLA P +LG +SGA+LG V++ G + G+ + L +AA A
Sbjct: 93 GSVLQAATRNPLADPHLLGATSGATLGAVIVVMHVGEVAGL----------LTLPLAAFA 142
Query: 136 GALSVMTLIVFVSQKVK--GSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLG 193
G+L + L+++++ S LL+ GV + +V AI + + + + W LG
Sbjct: 143 GSLVSLCLVLWLASHNGRLDSQRLLLGGVAVSFVMMAIANLSLFLGDHRASSSVLFWMLG 202
Query: 194 SFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSG 253
+T+ + ++ L L ++LN L+ GD A +LGL ++ RL V +
Sbjct: 203 GLGLARWELLTVPLITVMSGWILLQGLGRSLNALMGGDQTATSLGLQVRNVRLLVFLIAS 262
Query: 254 ILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGF 313
++T ++ A CG + F+GL VPH+ R L+ S+HR L+P A L G+ L + ++I+R
Sbjct: 263 LMTGVLVALCGSIGFVGLMVPHIARRLV-GSEHRRLLPVATLLGALLMIWVDVISRTLIA 321
Query: 314 EGALPVNSITALIGAPIVVYVL 335
LP+ TAL+G ++++
Sbjct: 322 PEDLPIGIATALLGGVFFIFMM 343
>gi|37526553|ref|NP_929897.1| vtamin B12-transporter permease [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|59797835|sp|Q7N3Q3|BTUC_PHOLL Vitamin B12 import system permease protein btuC
gi|36785984|emb|CAE15036.1| Vitamin B12 transport system permease protein BtuC [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 335
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 94/290 (32%), Positives = 158/290 (54%), Gaps = 13/290 (4%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLS 110
Q VW+ R P+ + + GA L+V+G MQ +F NPLA P +LG+S+GA + V ++L+
Sbjct: 55 QLFVWQLRFPRVLAVVAVGASLTVAGAVMQALFENPLAEPGLLGVSNGAGVVVVFLVLMF 114
Query: 111 GSIGGVALSKLGYIGEIALTIAATAGALSV-MTLIVFVSQKVKGSVTLLIIGVMIGYVAN 169
I L L+I A GAL+V M L+ F + + LL++GV G +
Sbjct: 115 HGIAPFWL----------LSIGAVLGALTVTMILLTFSRNRYLNNARLLLVGVAFGVASG 164
Query: 170 AIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLL 229
A++ YFS D+R + W +GSF+ + L + + +++ LS K LN L L
Sbjct: 165 ALMTWMVYFSTSLDLRQLMYWMMGSFSGIDWRHQWLVVALFPLIIWLS-RQGKVLNFLSL 223
Query: 230 GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVL 289
G+ A+ LG+++ R + G+L + A G + F+GL +PH+ R L +D++ L
Sbjct: 224 GETQAQQLGISLYYWRNLFVFAVGLLVGLSVALAGTISFIGLVIPHILR-LCGLTDYKTL 282
Query: 290 MPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+PA +L+G LL +L++R+ +P+ +TA +GAP+ +++L R
Sbjct: 283 LPACVLSGGYGLLLADLLSRLSLNNAEVPIGVVTATLGAPVFIWLLLRVR 332
>gi|89893111|ref|YP_516598.1| hypothetical protein DSY0365 [Desulfitobacterium hafniense Y51]
gi|89332559|dbj|BAE82154.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 344
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 94/294 (31%), Positives = 160/294 (54%), Gaps = 14/294 (4%)
Query: 47 PVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASV 106
P + +V+ R+P+++ A++ G+ LS+SG Q VF+NPL P VLG+SSGA +G +
Sbjct: 60 PQQAEGVVFTLRLPRALAAILVGSALSLSGACYQGVFKNPLVAPDVLGVSSGACIGASLG 119
Query: 107 ILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGY 166
ILL + G+ L +A T TA AL+ + +Q + + L++ G+++G
Sbjct: 120 ILLGWNASGIQL--------LAFTGGITAVALTTSIPKITRNQSM---MMLVLSGIIVGG 168
Query: 167 VANAIIGVFKYFS-VEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLN 225
+ ++I+G KY + E + + W +GS A+V + ++ + LL +N
Sbjct: 169 LMSSIMGFIKYIADPETQLASITYWQMGSLAKVVSPDLVTVALPILTATGILLLLRWRIN 228
Query: 226 LLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSD 285
+L LGD A++LG+ + R+R VI C+ +LTA G + ++GL +PH R +L D
Sbjct: 229 VLSLGDREAQSLGIPVIRSRRIVILCATVLTASAVCISGTIGWVGLVIPHFGR-MLVGPD 287
Query: 286 HRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+R L+P + L G L+ + ARM LP+ +T ++GAP Y+L +R
Sbjct: 288 NRKLLPVSCLLGGIFLLVIDTCARMMT-SAELPLTILTGIVGAPFYFYLLIKQR 340
>gi|15669899|ref|NP_247872.1| iron III dicitrate ABC transporter, permease protein
[Methanocaldococcus jannaschii DSM 2661]
Length = 348
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 176/316 (55%), Gaps = 14/316 (4%)
Query: 1 MKRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVP 60
+KR+ L +I +S+ +V ++ LG++ I + + + + + I++K R+P
Sbjct: 3 LKRFLTLSII-LSILLVISSIYSIKLGTISIKNKELADYLLKGTTGNKIKDKIIFKLRLP 61
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSK 120
++I A+VAG ++++G+ MQ FRNPLA P ++G++SGASLGV + L K
Sbjct: 62 RTIGAIVAGIAIALAGILMQGYFRNPLADPYLMGVASGASLGVVLYLFT------YMLFK 115
Query: 121 LGYIGEI-ALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYF- 178
LG I I+A GA M +++ +++ VK TLLI G+MIG +A+ + Y
Sbjct: 116 LGIPHNIYGFIISAYIGAFITMFIVINIARVVKQVSTLLICGLMIGAIASGFSTIVIYLG 175
Query: 179 ----SVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLS-FLLIKTLNLLLLGDGY 233
++ ++++W +GS ++ + + + I L + L IK L+ LLG+ Y
Sbjct: 176 DYIGEENSNLSSFLMWEMGSVNNLTWDMVVIMALINYPTLNFNPHLSIKKLDANLLGEKY 235
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A ++G++IK R+++I S +LTA V A+ GP+ F+G+ P L R + TS H ++P
Sbjct: 236 AISVGVDIKSLRMWLIILSCVLTATVVAFTGPIAFVGITCPILARMICGTSKHIYVIPVT 295
Query: 294 ILTGSSLALLCNLIAR 309
+L G+ ++ +++ R
Sbjct: 296 MLLGAVFLVVADILTR 311
>gi|15669067|ref|NP_247871.1| iron(III) dicitrate transport system permease protein
[Methanocaldococcus jannaschii DSM 2661]
gi|3024913|sp|Q58286|Y876_METJA Putative ABC transporter permease protein MJ0876
gi|1591557|gb|AAB98879.1| iron(III) dicitrate transport system permease protein
[Methanocaldococcus jannaschii DSM 2661]
Length = 351
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 93/300 (31%), Positives = 164/300 (54%), Gaps = 18/300 (6%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
I+ R+P I A++ G +SV+GL +QT+FRN LA P GISSG + VA VI +
Sbjct: 53 IIKDVRLPPIIGAVLIGLTISVAGLMLQTLFRNLLASPYTTGISSGVLMVVALVIFID-- 110
Query: 113 IGGVALSKLGYI-GEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAI 171
+LS L I GE ++ +A G + M L++ ++ +V+ + ++I+ +++ Y +
Sbjct: 111 ----SLSHLFEIFGEKSILVAGWCGGIFSMILLIIIALRVREANGVIIVALLLSYFFMGL 166
Query: 172 IGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGD 231
+ E I+ Y + +GS ++++ + II + LIK+LN LL G+
Sbjct: 167 RAYLIANAEELKIQEYWGFTIGSLSKITLGDVIPMTICSIIFIIGVMFLIKSLNALLFGE 226
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
YAK+ GL+IK+ RL V+ + +T + Y G + F+G+ P+L R L++TSDHR L+P
Sbjct: 227 QYAKSFGLDIKKTRLLVLFFASFITGAIIPYVGLIAFIGIIAPYLARPLIKTSDHRYLVP 286
Query: 292 AAILTGSSLALLCNLIA--------RMPGFE---GALPVNSITALIGAPIVVYVLFSKRK 340
A + G L + C++++ + G LP+ ++ ++G +VVY+++ K
Sbjct: 287 ATMFLGVILMVSCHILSLKYYLPIHYLYGINRPASPLPIGAVLDILGGMLVVYLVYKGEK 346
>gi|20090065|ref|NP_616140.1| iron ABC transporter, permease protein [Methanosarcina acetivorans
C2A]
gi|19915038|gb|AAM04620.1| iron ABC transporter, permease protein [Methanosarcina acetivorans
C2A]
Length = 347
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 98/346 (28%), Positives = 179/346 (51%), Gaps = 19/346 (5%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEE-----PVVWQNIVWK 56
K + + VL +++ ++ FF+++ +G I + V G P I++K
Sbjct: 9 KEFELPVLTLLAIVLILTFFISVYIGRYTITPGQLIMAVAGKIANVDYTLPDTADTILFK 68
Query: 57 SRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGV 116
R+P+ I A++ GA L+ +G Q +F+NP+ P +LG S GA G A ILLS G+
Sbjct: 69 VRLPRIIAAILIGANLATAGAAYQGMFKNPMVSPDILGASHGAGFGAAVAILLSFGTAGI 128
Query: 117 ALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFK 176
+S L + L T+ V ++T+++ G+++ + A + K
Sbjct: 129 QMSSL---------LFGLGAVLLSYTISKIVGHGDNATLTMVLTGMVVSTMFAAFTSMTK 179
Query: 177 YFS-VEEDIRAYVIWGLGSFARVS-GNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYA 234
Y + +E + A W +GS A ++ + + L I ++ ++PL FL K LN+L GD A
Sbjct: 180 YVADTDEKLPAITFWLMGSLASITRKDVLILLIPTVLGMIPLLFLRWK-LNVLAFGDEEA 238
Query: 235 KNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAI 294
+ +G++ K+ R +I S +L A + G + ++GL VPH+ R + +++ L+ A++
Sbjct: 239 QAMGVDTKKVRSIIIFSSTLLVASSVSISGMIGWIGLIVPHIARQFV-GPNYKHLLFASM 297
Query: 295 LTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
G S L+ + +AR F +P+ +TAL+GAP +Y+L +R+
Sbjct: 298 FVGGSFLLIVDDVAR-NAFSAEIPLGILTALLGAPFFLYLLLKERR 342
>gi|149006281|ref|ZP_01829993.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP18-BS74]
gi|147762058|gb|EDK69020.1| iron-compound ABC transporter, permease protein [Streptococcus
pneumoniae SP18-BS74]
Length = 335
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 100/340 (29%), Positives = 176/340 (51%), Gaps = 15/340 (4%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQ 61
K+ + ++ I + ++ FL+L LG+ I +R ++I++K R+P+
Sbjct: 5 KQINLGIIFVICLGLLITIFLSLKLGTKEINIRDFLAAFGMGNTNDDFIKSIIYK-RIPR 63
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
I A++AG+ L++SG+ MQ+V RNP+A P +LGI++GASL V + LS L
Sbjct: 64 IIFAILAGSSLAISGVLMQSVTRNPIADPGILGINTGASLSVV-----------IGLSFL 112
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVE 181
G I+ A G L + + ++ K +T + + + V+ A+ + +
Sbjct: 113 GISSSISHISFAIIGGLVSVIFVYAIAVSGKAGLTPIKLALSGTCVSMALSSFVSFLILP 172
Query: 182 ED--IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGL 239
+ + + W +GS + + ++ + +I+ ++ + LN L +GD A LG+
Sbjct: 173 NNNVLDKFRFWQIGSLGAATLSSISTLLPFIILGHLIAIFISSDLNALAMGDEMAVGLGV 232
Query: 240 NIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSS 299
N+ R R I S +L + +TA GP+ F+GL VPH C GL + D R + ++ G+
Sbjct: 233 NVNRIRSLAIIASVLLCSSITAIGGPIGFVGLIVPHFC-GLFISKDIRTMTISSSFIGAE 291
Query: 300 LALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
L L+C++I RM G G + V ITA+IG P+++YV R
Sbjct: 292 LLLICDIIGRMLGKPGEIEVGIITAIIGGPVLIYVTMKNR 331
>gi|157084089|gb|ABV13767.1| hypothetical protein CKO_02659 [Citrobacter koseri ATCC BAA-895]
Length = 334
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 99/316 (31%), Positives = 168/316 (53%), Gaps = 19/316 (6%)
Query: 27 GSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNP 86
G+++I S++N E +W NI R+P+ + A++ G L+ +G+ MQ +FRNP
Sbjct: 34 GALNISFSSLFN-----QEYRDIWLNI----RLPRVLLAVLVGGALATAGVIMQGLFRNP 84
Query: 87 LAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVF 146
+A P +LG+SSG++L V I+ S+ V + I A AG++ V +I
Sbjct: 85 MADPGLLGVSSGSALMVGVAIVFPLSLPVV-------LALYEQMIFAVAGSVVVCAVIFL 137
Query: 147 VSQKVK--GSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMT 204
+S + G + LL+ G+ I + A IG+ Y E+ +R +W +GS + +
Sbjct: 138 ISLRHAHGGMMQLLLAGIAINALCGAAIGILSYVGDEQQLRQLTLWMMGSLGQAQWPTLL 197
Query: 205 LFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCG 264
+ + + + L TLNLL LGD A LG+N+KR R ++ S +L + G
Sbjct: 198 VASSFALPAIAATACLSGTLNLLQLGDEEAHYLGVNVKRKRQQLLLLSSLLVGAAVSVSG 257
Query: 265 PVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITA 324
+ F+GL VPHL R ++ +DHR L+P + L G+ L L+ + +AR +PV +T+
Sbjct: 258 VIGFIGLVVPHLIR-MIIGADHRWLIPCSTLAGACLLLVADTLARTLVQPAEMPVGLLTS 316
Query: 325 LIGAPIVVYVLFSKRK 340
LIG P ++++ + R+
Sbjct: 317 LIGGPWFLWLILNSRR 332
>gi|118068745|ref|ZP_01536995.1| transport system permease protein [Serratia proteamaculans 568]
gi|118016916|gb|EAV30838.1| transport system permease protein [Serratia proteamaculans 568]
Length = 335
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 95/287 (33%), Positives = 162/287 (56%), Gaps = 15/287 (5%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLS 110
Q VW+ R+P+++ ++ GA L+V+G MQ++F NPLA P +LG+++GA + + +LL
Sbjct: 55 QLFVWQLRLPRALAVMLVGASLAVAGAVMQSLFENPLAEPGLLGVANGAGVALVLTVLLG 114
Query: 111 GSIGGVALSKLGYIGEIALTIAATAGALSVMT--LIVFVSQKVKGSVTLLIIGVMIGYVA 168
+ VA ++++A AGAL VMT L+ F +K + LL++GV +G V
Sbjct: 115 NGLLPVAF----------MSLSAIAGAL-VMTFLLLSFARRKRLTNARLLLVGVALGIVC 163
Query: 169 NAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLL 228
+A++ YFS D+R + W +G F V Q L + ++ +LL L K LN +
Sbjct: 164 SAVMTWAVYFSSSLDLRQLMYWMMGGFGGVDWRQKWLVLALLPVLLWLC-CQGKALNFMA 222
Query: 229 LGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRV 288
LG+ A+ LGL++ R ++ G L + A G + F+GL +PH+ R L ++ R
Sbjct: 223 LGEVQARQLGLSLHLWRNLLVLAIGWLVGVSVALAGVIGFVGLVIPHMLR-LSGLTNQRY 281
Query: 289 LMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVL 335
L+P L G+ + L +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 282 LLPGCALAGAGVLLAADVVARITLLSAELPIGVVTATLGAPLFIWLL 328
>gi|116754490|ref|YP_843608.1| transport system permease protein [Methanosaeta thermophila PT]
gi|116665941|gb|ABK14968.1| transport system permease protein [Methanosaeta thermophila PT]
Length = 369
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 84/290 (28%), Positives = 160/290 (55%), Gaps = 11/290 (3%)
Query: 51 QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLS 110
++IVW R+P+ + +VAG+GL V+G MQ V RNPL P +GISS A+ G + I+
Sbjct: 84 ESIVWHLRLPRILMGIVAGSGLGVAGAVMQAVTRNPLVSPFTVGISSAAAFGASMAIMF- 142
Query: 111 GSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVAN 169
IG V +G + ++A AL L+ F+S+ + S ++++ G+ + Y
Sbjct: 143 -GIGYVG------VGTYIIILSAFISALGCGLLVFFISRLKRSSPEVMVLAGIALTYFFG 195
Query: 170 AIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLL 229
++ + ++F+ E+ + A V W G+ + +++T+ ++ +P+ LN++
Sbjct: 196 SLTAILQFFANEQQLNAMVNWTFGTLSGADWHKLTIITGAFLLSMPVFIRFSWDLNIMFS 255
Query: 230 -GDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRV 288
GD AK+LG+N+ + R + S +TA + + G + F+GL PH+ R +L SDHR
Sbjct: 256 GGDEAAKSLGINVAQVRNVALLLSSFITAAIVCFTGIIGFVGLVAPHVGRMVL-GSDHRF 314
Query: 289 LMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSK 338
L+PA+ + GS L + +++ R +P+ + + +G P+ +Y++ ++
Sbjct: 315 LLPASCVVGSILVIGADIVGRTILAPVIIPIGIVISFVGVPMFLYLMVTR 364
>gi|89892834|ref|YP_516321.1| hypothetical protein DSY0088 [Desulfitobacterium hafniense Y51]
gi|89332282|dbj|BAE81877.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 339
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 85/292 (29%), Positives = 158/292 (54%), Gaps = 6/292 (2%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
I+ R+P ++ A+V GA L +SG ++QT+ RNP+A P LGIS+ AS G A ++L+ +
Sbjct: 53 IIKDIRLPMALMAVVVGASLGISGCELQTILRNPIASPYTLGISAAASFGAAMGLILNAN 112
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLI-VFVSQKVKGSVTLLIIGVMIGYVANAI 171
+ L L +A+T+ A AL V I +F Q+ +++ GV + ++ N++
Sbjct: 113 V----LKSLKVPETLAVTVNAFIFALMVAVAIYIFSRQRQINKTAIILFGVALNFLFNSL 168
Query: 172 IGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGD 231
V +Y + E +++ + W GS + + ++ + +++I + F L + L D
Sbjct: 169 TMVLQYIADENQLQSLIFWNFGSLLKTTWSKFFIVALVLVICFLVLFKNAWKLTAMTLDD 228
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
A+++G++ + R VI S +L A+ + G + F+GL PH+ R L+ D R MP
Sbjct: 229 TKARSIGVDTAKVRRMVIFVSSLLAAVSVCFVGTIGFVGLIAPHIARQLV-GEDQRFFMP 287
Query: 292 AAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKNEM 343
+ L G+ + L +I+++ LP+ +T++IG P + ++FSK+ M
Sbjct: 288 LSGLLGAFVMCLAFVISKLIIRGVILPIGLVTSIIGIPFFIAIIFSKKMRSM 339
>gi|109647856|ref|ZP_01371759.1| transport system permease protein [Desulfitobacterium hafniense
DCB-2]
gi|109640946|gb|EAT50501.1| transport system permease protein [Desulfitobacterium hafniense
DCB-2]
Length = 331
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 85/292 (29%), Positives = 158/292 (54%), Gaps = 6/292 (2%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
I+ R+P ++ A+V GA L +SG ++QT+ RNP+A P LGIS+ AS G A ++L+ +
Sbjct: 45 IIKDIRLPMALMAVVVGASLGISGCELQTILRNPIASPYTLGISAAASFGAAMGLILNAN 104
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLI-VFVSQKVKGSVTLLIIGVMIGYVANAI 171
+ L L +A+T+ A AL V I +F Q+ +++ GV + ++ N++
Sbjct: 105 V----LKSLKVPETLAVTVNAFIFALMVAVAIYIFSRQRQINKTAIILFGVALNFLFNSL 160
Query: 172 IGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGD 231
V +Y + E +++ + W GS + + ++ + +++I + F L + L D
Sbjct: 161 TMVLQYIADENQLQSLIFWNFGSLLKTTWSKFFIVALVLVICFLVLFKNAWKLTAMTLDD 220
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
A+++G++ + R VI S +L A+ + G + F+GL PH+ R L+ D R MP
Sbjct: 221 TKARSIGVDTAKVRRMVIFVSSLLAAVSVCFVGTIGFVGLIAPHIARQLV-GEDQRFFMP 279
Query: 292 AAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKNEM 343
+ L G+ + L +I+++ LP+ +T++IG P + ++FSK+ M
Sbjct: 280 LSGLLGAFVMCLAFVISKLIIRGVILPIGLVTSIIGIPFFIAIIFSKKMRSM 331
>gi|149191983|ref|ZP_01870212.1| putative hemin ABC transporter, permease protein [Vibrio shilonii
AK1]
gi|148834161|gb|EDL51169.1| putative hemin ABC transporter, permease protein [Vibrio shilonii
AK1]
Length = 309
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 93/288 (32%), Positives = 162/288 (56%), Gaps = 4/288 (1%)
Query: 53 IVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGS 112
I+ R+P+++ + GA L+V G MQ +FRNPLA P ++G+S+GASLG ++ ++ S
Sbjct: 21 IIHDIRLPRTMLCMFVGAILAVCGTVMQGLFRNPLAEPGIIGVSAGASLG-GAIAIVGFS 79
Query: 113 IGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLII-GVMIGYVANAI 171
I GV + + I A GAL+ + + + K SVT++++ GV I ++ A
Sbjct: 80 IIGVEFPQFMALA-IVPVFAFFGGALTTLLVYRLGTSKFGTSVTIMLLAGVAISALSGAG 138
Query: 172 IGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGD 231
IG + + ++ +R +W +GS A + ++ L +I L + +LN LLLG+
Sbjct: 139 IGFLNFVADDQMLRDLSLWSMGSLAGATWGKIALSAVTLIGLFYFFYKKAMSLNALLLGE 198
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
AK+LG+ +++ + +I + + + + G + F+GL +PHL R +L DHR L+P
Sbjct: 199 SEAKHLGIPVQKLKRQLILLTAVGVGVTVSVSGMIGFIGLVIPHLGR-MLCGPDHRTLLP 257
Query: 292 AAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+ L G+ L ++ AR+ LPV +TA+IGAP +Y+LF ++
Sbjct: 258 LSALLGALLMTAADMFARVAVAPAELPVGIVTAIIGAPFFLYLLFQQK 305
>gi|116753756|ref|YP_842874.1| transport system permease protein [Methanosaeta thermophila PT]
gi|116665207|gb|ABK14234.1| transport system permease protein [Methanosaeta thermophila PT]
Length = 355
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 109/342 (31%), Positives = 174/342 (50%), Gaps = 18/342 (5%)
Query: 6 VLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSA-----EEPVVWQNIVWKSRVP 60
+L + +S+SIV ++ LGS ++ + V++ + A E IVW R+
Sbjct: 22 LLFMAALSLSIVIIAGISATLGSANLSVFEVYSAILARAFPGYFETTWFADTIVWGLRLH 81
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSK 120
+ + +VAGAGL V+G MQ + +NPLA P LGISS AS G A I+L
Sbjct: 82 RILMGVVAGAGLGVAGAAMQGILKNPLASPFTLGISSAASFGAALAIILGA--------- 132
Query: 121 LGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV--TLLIIGVMIGYVANAIIGVFKYF 178
G+ G L I + T V+ K KG T+++ G+ I Y +A+ +Y
Sbjct: 133 -GFAGGEYLIIGNAFVFTLLATFAVYGLAKYKGITPETMILAGIAIMYFFSAMTSFLQYV 191
Query: 179 SVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLG 238
E ++ V W +GS R S +++ ++II LP L +N + GD AK+LG
Sbjct: 192 GRAEQVQEVVFWMMGSLGRSSWDKVYASALMIIICLPYLILKSWDINAIGAGDETAKSLG 251
Query: 239 LNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGS 298
+N++R R+ + + ++TA V + G + F+GL PH+ R ++ DHR L+P + L GS
Sbjct: 252 VNVERIRVLSMIFASLITASVICFTGTIGFIGLVAPHMTR-MVIGGDHRFLIPGSALMGS 310
Query: 299 SLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+ L + +AR LPV +T+ +G P VY+ +RK
Sbjct: 311 VILLAADTLARTVLAPVILPVGIMTSFLGVPFFVYLFMKRRK 352
>gi|153094282|gb|EDN75146.1| possible hemin ABC superfamily ATP binding cassette transporter,
membrane protein [Mannheimia haemolytica PHL213]
Length = 328
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 102/338 (30%), Positives = 186/338 (55%), Gaps = 21/338 (6%)
Query: 12 ISVSIVFFFFLNLV----LGSVHIPLRSVWNIVCGSAE-EPVVWQNIVWKSRVPQSITAL 66
+ ++++F ++LV LG++ +PL S W+ C +AE E + I+W+ R+P+ + AL
Sbjct: 3 LHLTLIFTLIISLVICTHLGAMSLPL-SAWH--CNNAECESAAY--ILWQIRLPRLLGAL 57
Query: 67 VAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGE 126
GA L++SG MQ +FRNPL P ++G+SSGA+L A I++ + ++S
Sbjct: 58 FIGAALAISGATMQGLFRNPLVDPGIIGVSSGAALAAALYIVVIQPLLPESISYY----- 112
Query: 127 IALTIAATAGALSVMTLIVFVSQKVKGSV---TLLIIGVMIGYVANAIIGVFKYFSVEED 183
AL IAA G V ++ +SQ+ G + +L+IG+ + + A+ G+ Y + +
Sbjct: 113 -ALPIAAFLGGWLVTFMLYLLSQR-NGQLHIAIMLLIGIALAAFSGALTGILIYVADDNQ 170
Query: 184 IRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKR 243
+R+ W +GS A ++ + + ++ I PL + + LN L LG+ A+ +G +I +
Sbjct: 171 LRSLTFWSMGSLAGMNWQMVAMMAAVVFICSPLIWREHRALNALTLGEEDAQYIGFDIAK 230
Query: 244 ARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALL 303
+ ++ +LT A G + F+GL +PHL R LL S+HR L+ +++ G+ L ++
Sbjct: 231 VKRRLVFYVALLTGTSVACVGAIGFVGLVIPHLMR-LLGGSNHRHLLLNSLVCGAILLMI 289
Query: 304 CNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRKN 341
+ +AR +P+ TAL GAP + +++ K+
Sbjct: 290 ADTLARTLAAPAEIPIGIFTALFGAPFLAVMVWKSGKH 327
>gi|19704219|ref|NP_603780.1| Hemin transport system permease protein hmuU [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|19714444|gb|AAL95079.1| Hemin transport system permease protein hmuU [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 345
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 100/325 (30%), Positives = 166/325 (51%), Gaps = 23/325 (7%)
Query: 24 LVLGSVHIPLRSVWNIVCGSAEE----PVVWQN----IVWKSRVPQSITALVAGAGLSVS 75
+ +GSV + VW I+ + + W+ IVW R P+ +TA++AGA LS
Sbjct: 27 ITVGSVSLKNLDVWKIIVNKSFNHNIFTITWEESSEIIVWTLRAPRIVTAILAGASLSFV 86
Query: 76 GLQMQTVFRNPLAGPSVLGISSGASLGVASVILL-SGSIGGVALSKLGYIGEIALTIAAT 134
G+ MQ + +NPLA P +LGISSGAS G VIL+ SGS +++ A
Sbjct: 87 GILMQALTKNPLASPYILGISSGASTGAVLVILIFSGSYIFISVG------------AFI 134
Query: 135 AGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG-VFKYFSVEEDIRAYVIWGLG 193
G L+ + + F + S L+++G I + + + + E IR + W G
Sbjct: 135 LGTLTALLVFYFANSNGFSSTKLVLVGAAISAIFSGLTSLIIAVTPNERAIRGALFWMSG 194
Query: 194 SFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSG 253
S A + + ++I+ L + LN+L+ GD A +LG+++K+ R ++ S
Sbjct: 195 SLAGSTWQYIPFLFISLLIVFILVYPKYDELNILVTGDENATSLGVDVKKIRFLIMITST 254
Query: 254 ILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGF 313
LT IV A G + F+GL +PH+ RGL+ +H+ ++P AIL G+ +L + + R
Sbjct: 255 FLTGIVVANTGIIGFVGLVIPHITRGLV-GGNHKKVIPIAILLGAVFLVLTDTLTRTVVS 313
Query: 314 EGALPVNSITALIGAPIVVYVLFSK 338
+P+ IT+++GAP + +L K
Sbjct: 314 SQEIPIGVITSVLGAPFFLSMLRRK 338
>gi|118733160|ref|ZP_01581672.1| transport system permease protein [Delftia acidovorans SPH-1]
gi|118666742|gb|EAV73340.1| transport system permease protein [Delftia acidovorans SPH-1]
Length = 391
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 116/330 (35%), Positives = 169/330 (51%), Gaps = 27/330 (8%)
Query: 22 LNLVLGSVHIPLRSVWNI-------VCGSAEEPV-----VWQNIVWKSRVPQSITALVAG 69
L + G V +P +VW I V G P+ Q IVW R+P+ + A + G
Sbjct: 62 LAITWGPVDMPAGTVWRIAWSRLLQVLGMQPPPLEGITPQHQQIVWLIRMPRVLLAALVG 121
Query: 70 AGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIAL 129
AGL+V G MQ + RNPLA P +LG+SSGAS+G +V+ A L G AL
Sbjct: 122 AGLAVVGTIMQAMVRNPLADPYLLGVSSGASVGAVAVL---------AFGALASAGMYAL 172
Query: 130 TIAATAGALSVMTLIVFVSQKVKGSV---TLLIIGVMIGYVANAIIGVFKYFSVEEDI-R 185
T A GAL+ T+ V++ + +G + L++ GV IGYV + + S + D+
Sbjct: 173 TAGAFVGALAA-TVAVYLLARSQGRIHATRLILGGVAIGYVLAGVTSLITLSSGQRDLAN 231
Query: 186 AYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRAR 245
A + W LGS A ++ + ++ + L + LN LL GD A LG++ R R
Sbjct: 232 ALLTWTLGSLAGTQWEELGIPAAVLAAGMLWLGLQTRPLNALLAGDEAAATLGVDTARLR 291
Query: 246 LYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCN 305
+ +LT + A G + F+GL VPH R L+ T DHR ++P A L G+ L +L +
Sbjct: 292 RALFLAVSLLTGTMVAVSGAIGFVGLIVPHAARMLVGT-DHRRVLPVAALAGALLLVLVD 350
Query: 306 LIARMPGFEGALPVNSITALIGAPIVVYVL 335
L+AR LPV IT+LIG P V++L
Sbjct: 351 LVARTAFAPMELPVGVITSLIGGPFFVWML 380
>gi|21465989|pdb|1L7V|A Chain A, Bacterial Abc Transporter Involved In B12 Uptake
gi|21465990|pdb|1L7V|B Chain B, Bacterial Abc Transporter Involved In B12 Uptake
Length = 326
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 92/283 (32%), Positives = 156/283 (55%), Gaps = 12/283 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
VW+ R+P+++ L+ GA L++SG Q +F NPLA P +LG+S+GA +G+ + +LL
Sbjct: 52 VWQIRLPRTLAVLLVGAALAISGAVXQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQ-- 109
Query: 114 GGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIG 173
G + AL + A AGAL + +++ +++ + LL+ GV +G + +A+
Sbjct: 110 --------GQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALXT 161
Query: 174 VFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGY 233
YFS D+R W G F V Q L + ++ +LL + + N L LG+
Sbjct: 162 WAIYFSTSVDLRQLXYWXXGGFGGVDWRQSWLXLALIPVLLWIC-CQSRPXNXLALGEIS 220
Query: 234 AKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAA 293
A+ LGL + R +++ +G + A G + F+GL +PH+ R L +DHRVL+P
Sbjct: 221 ARQLGLPLWFWRNVLVAATGWXVGVSVALAGAIGFIGLVIPHILR-LCGLTDHRVLLPGC 279
Query: 294 ILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLF 336
L G+S LL +++AR+ LP+ +TA +GAP+ +++L
Sbjct: 280 ALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLL 322
>gi|20090697|ref|NP_616772.1| iron(III) ABC transporter, permease [Methanosarcina acetivorans
C2A]
gi|19915749|gb|AAM05252.1| iron(III) ABC transporter, permease [Methanosarcina acetivorans
C2A]
Length = 351
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 88/289 (30%), Positives = 156/289 (53%), Gaps = 13/289 (4%)
Query: 54 VWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSI 113
+W R+P+ +VAG GL V+G Q + +NPLA P LGISSGA G AS+ +L+GS
Sbjct: 71 IWNLRLPRIFMGIVAGFGLGVAGCVTQAILKNPLASPYTLGISSGAGFG-ASLAILTGS- 128
Query: 114 GGVALSKLGYIGEIALTI--AATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAI 171
G IG L I A L ++ ++K T+++ G+ + Y+ +A+
Sbjct: 129 --------GIIGGDYLVIGNAFLFALLCSFIILGLSNRKDATPETMILAGIAMMYLFSAM 180
Query: 172 IGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGD 231
+ +YF E ++ + W +G R S ++++ + + L + LN++ GD
Sbjct: 181 TTILQYFGEAEAVKEAIFWAVGDLGRSSWPKVSIITITLACCVFLLMIKSLDLNIMAAGD 240
Query: 232 GYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMP 291
A +LG+N+K R+ +++ + +L A + + G + F+GL PHL R + D+R ++P
Sbjct: 241 ETAASLGVNVKGTRILLMAVTTLLVACIVCFTGTIGFIGLVAPHLTR-IAIGGDNRFVLP 299
Query: 292 AAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+ L G+ L + +L+AR LPV +ITA +GAP+ +Y++ +++
Sbjct: 300 VSGLFGALLLISADLVARRVLAPIILPVGAITAFMGAPLFLYMIMKRKR 348
>gi|29376195|ref|NP_815349.1| iron compound ABC transporter, permease protein [Enterococcus
faecalis V583]
gi|29343658|gb|AAO81419.1| iron compound ABC transporter, permease protein [Enterococcus
faecalis V583]
Length = 335
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 97/342 (28%), Positives = 190/342 (55%), Gaps = 17/342 (4%)
Query: 2 KRYTVLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNI-VCGSAEEPVVWQNIVWKSRVP 60
K+ +++++ IS+S++F L + +GSV I L + I V + E + + I+W R+P
Sbjct: 3 KKTCLILMLLISMSMLF---LGIKIGSVQISLTDLLQILVKKTVSEDGILEGIIWNVRLP 59
Query: 61 QSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSK 120
+ + A + GAGL+VSG MQ++ NPLA LG+S+GASLG A++I+++G +
Sbjct: 60 RVVMAYLVGAGLAVSGTVMQSLLGNPLASSYTLGVSAGASLG-AALIMVTGVTASI---- 114
Query: 121 LGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV---TLLIIGVMIGYVANAIIGVFKY 177
+G L + L+ + L++ +Q + + T++++G+++ AI+ +
Sbjct: 115 ---LGAFLLPLTGFIFGLATVFLVLLFTQTMDSQMSNQTVVLVGMIMTLFVGAILTLITA 171
Query: 178 FSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNL 237
++ ++ V W +GSF+ + ++ ++ I+++ + L++L LG+ +A
Sbjct: 172 L-FQDYLKQLVFWQMGSFSGSNWQKIAIYCPILLVSSLFLWFDANALDVLGLGEEHAMLA 230
Query: 238 GLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTG 297
G+ +K A+L +I + +L ++ G + F+ L PH+ R L + HR L+P + + G
Sbjct: 231 GVEVKTAKLRIILLASLLAGSAVSFVGVIGFVDLIAPHIVRRYLGAT-HRWLIPGSAILG 289
Query: 298 SSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
++ +L + IAR +P+ ++TALIGAP +Y+ F KR
Sbjct: 290 GTIMVLGDTIARTILSPREIPIGAVTALIGAPFFLYIYFKKR 331
>gi|134045452|ref|YP_001096938.1| transport system permease protein [Methanococcus maripaludis C5]
gi|132663077|gb|ABO34723.1| transport system permease protein [Methanococcus maripaludis C5]
Length = 348
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 99/343 (28%), Positives = 169/343 (49%), Gaps = 7/343 (2%)
Query: 2 KRYTVLVLIF---ISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSR 58
K+YT+ LIF + ++++ L G H+ + + N + GS + ++W R
Sbjct: 9 KKYTLKKLIFGFLLIIALIVIAVYALCTGDFHLSINQIINALLGSGD--AASNLVIWNIR 66
Query: 59 VPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVAL 118
+P+ A++ G GLSVSG MQ V RNPLA P +GIS GA G I+ G G +
Sbjct: 67 LPRIFAAVLCGIGLSVSGAVMQCVLRNPLASPFTMGISHGAMFGACVAIITLGIGGAEST 126
Query: 119 SKLGYIGEIALTIAATAGA-LSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKY 177
+ ++T+ A G+ L V +++ K +++ GV I + A + +Y
Sbjct: 127 GHIAINNPYSITVFAFFGSLLGVCAVLLLARLKGLSPEAMILAGVAISSLFTAATTLIQY 186
Query: 178 FSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNL 237
F+ + + A V W G R ++ + ++ + L N L G+ AK+L
Sbjct: 187 FADDMQLAAMVYWSFGDLGRPLWPEVKIMAFVAAVSLIYFIHKRWDYNALESGEETAKSL 246
Query: 238 GLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTG 297
G+N + RL + + ++T++ A+ G + F+GL PH+ R + D+R L+P + G
Sbjct: 247 GVNTDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIVR-ITVGGDYRYLIPLCSIFG 305
Query: 298 SSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+ L LL + IAR LPV +T+ +GAP+ +Y+L K
Sbjct: 306 AVLVLLADTIARTIISPIILPVGILTSFLGAPMFLYLLMKMYK 348
>gi|55978402|ref|YP_145458.1| hemin ABC transporter, permease protein [Thermus thermophilus HB8]
gi|55773575|dbj|BAD72015.1| hemin ABC transporter, permease protein [Thermus thermophilus HB8]
Length = 341
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 92/285 (32%), Positives = 156/285 (54%), Gaps = 11/285 (3%)
Query: 58 RVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVA 117
R+P+ + A V G L+++G +Q +FRNPL P ++G+SSGA+LG A I+L G +
Sbjct: 61 RLPRVLGAAVVGGLLALAGAVLQGLFRNPLVDPGLIGVSSGAALGAALFIVLVPGAGPLE 120
Query: 118 LSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGS--VTLLIIGVMIGYVANAIIGVF 175
+ AL + A G L +L+ ++Q G+ LL+ G+ + + A IG+
Sbjct: 121 V--------YALPLFAFLGGLLATSLLWRLAQSPWGTQVTILLLSGIALNALVGAGIGLL 172
Query: 176 KYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAK 235
+ + EE++R+ W LG F+ ++ + + + + L L + LN L LG+ A
Sbjct: 173 TFLATEEELRSLTFWTLGGFSALTWRLLLVGVPFAFLAFALLLPLARPLNALALGEREAF 232
Query: 236 NLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAIL 295
+LG++++R + ++ + + + A G V FLGL PHL R LL DHR L+P + L
Sbjct: 233 HLGIDLERLKRRAVAGAALGVGVAVALAGGVGFLGLVAPHLFR-LLAGPDHRYLLPGSAL 291
Query: 296 TGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
G SLA+L +L+AR +PV +TAL+G P +Y++ ++
Sbjct: 292 LGGSLAVLADLLARTLAAPAEIPVGVVTALLGGPFFLYLVLRHKR 336
>gi|50120762|ref|YP_049929.1| vtamin B12-transporter permease [Erwinia carotovora subsp.
atroseptica SCRI1043]
gi|59797738|sp|Q6D656|BTUC_ERWCT Vitamin B12 import system permease protein btuC
gi|49611288|emb|CAG74735.1| vitamin B12 transport system permease [Erwinia carotovora subsp.
atroseptica SCRI1043]
Length = 331
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 91/298 (30%), Positives = 158/298 (53%), Gaps = 17/298 (5%)
Query: 47 PVVW-----QNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASL 101
P W Q VW+ R+P+++ ++ GA L++SG MQ VF NPLA P +LG+++GA +
Sbjct: 45 PTAWLDDAQQLFVWQLRLPRTLAVMLVGASLAMSGTVMQAVFDNPLAEPGLLGVANGAGV 104
Query: 102 GVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIG 161
+ +LL G + L+++A AGAL + L++ +++ + LL+IG
Sbjct: 105 ALVLTVLLGQ----------GLLPVWVLSLSAIAGALLITFLLLHFARRHISNTRLLLIG 154
Query: 162 VMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLI 221
+ +G + +A++ YFS D+R + W +G F+ + L + ++ +LL LS
Sbjct: 155 IALGIICSAVMTWAVYFSTSLDLRQLMYWMMGGFSGIDWRHGWLMLTLLPLLLWLS-RQG 213
Query: 222 KTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLL 281
LN L LG+ A+ LG+ + R R ++ G+ + A G + F+GL +PH+ R L
Sbjct: 214 TVLNGLTLGEIQARQLGIPVYRWRTVLVLVMGVQVGLSVALAGIIAFIGLIIPHMLR-LC 272
Query: 282 RTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+D R L+ L G + LL + +AR+ LP+ +TA G+P +++L R
Sbjct: 273 GLTDQRYLLTGCALAGGGVLLLADTVARVALNSAELPIGVVTATQGSPWFIWLLLRNR 330
>gi|156448990|ref|ZP_02055374.1| transport system permease protein [Methylobacterium
chloromethanicum CM4]
gi|156192506|gb|EDO24691.1| transport system permease protein [Methylobacterium
chloromethanicum CM4]
Length = 896
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 106/346 (30%), Positives = 182/346 (52%), Gaps = 21/346 (6%)
Query: 3 RYTVLVL-IFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGS------AEEPVVWQNIVW 55
R+ +L L + V+++ ++L +G +PL V+ ++ A +P Q +V
Sbjct: 561 RWRLLPLAVLAPVALILLVLVSLGIGRYPVPLADVFGVLVAKLFGQAPALDPAA-QIVVL 619
Query: 56 KSRVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGG 115
R+P+ ALV GAGL+ +G Q +FRNPL P +LG+S+GASLG I+L+ +
Sbjct: 620 NVRLPRVFGALVVGAGLAAAGATYQGLFRNPLVSPDILGVSAGASLGAVLGIVLALPVA- 678
Query: 116 VALSKLGYIGEIALTIAATAGALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVF 175
A+ L + G +A A A L+V ++ +TL++ GV +G + A I +
Sbjct: 679 -AIQGLAFAGGLAAVGAVYAVGLAV--------RRHDPVLTLVLAGVAVGALLGAGISLL 729
Query: 176 KYFSVE-EDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYA 234
K + + A W LGS A V+ + + M + L LL +NL+ LGD A
Sbjct: 730 KVLADPYNQLPAITFWLLGSLASVTAGDIAAILPAMALGLAPLVLLRWRVNLMSLGDEEA 789
Query: 235 KNLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAI 294
+ LG+ +R R +++ + ++TA + G + ++GL VPH+ R LL D R L+PA++
Sbjct: 790 RALGVETRRLRPLLVAGATLVTAAAVSVTGVIGWIGLIVPHVAR-LLVGPDFRRLLPASM 848
Query: 295 LTGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
L G+ +L+AR +P+ +TAL+GAP +++L + ++
Sbjct: 849 LLGAGYLTAVDLLARTVA-TIEVPLGILTALVGAPFFLWLLAAGKR 893
>gi|121602651|ref|YP_988773.1| hemin ABC transporter, permease protein [Bartonella bacilliformis
KC583]
gi|120614828|gb|ABM45429.1| hemin ABC transporter, permease protein [Bartonella bacilliformis
KC583]
Length = 366
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 86/285 (30%), Positives = 151/285 (52%), Gaps = 6/285 (2%)
Query: 58 RVPQSITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVA 117
R+P+ I L+ GA L+VSG+ MQ +FRNPLA P ++G+S+GASLG I+++ S +
Sbjct: 81 RLPRIILGLLVGAALAVSGVLMQGLFRNPLADPGIVGVSAGASLGAVLAIVVNISFPPLL 140
Query: 118 LSKLGYIGEIALTIAATAGAL--SVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVF 175
++ + I A G L +++ I+ T+L+ G+ + + A++G
Sbjct: 141 AP---FLESYQIIIGAFLGGLLSTIILYIIATHHSCTSIATMLLAGIALSSLNGAVVGTL 197
Query: 176 KYFSVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAK 235
+ + ++ +R W LGS + ++ L + + I L S L + LN L LG+ A
Sbjct: 198 IFIANDQQLRDITFWNLGSLVGGTWLKVGLILPFVWIGLIFSPFLSRALNALALGESVAN 257
Query: 236 NLGLNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAIL 295
++G N ++ + I ++ A G + F+G+ VPH+ R LL DHR L+P + +
Sbjct: 258 HIGFNTQKIKNIAILLVALMCGGAVAVSGGIGFIGIVVPHILR-LLIGPDHRYLIPCSAI 316
Query: 296 TGSSLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
G++L + + AR LP+ +TAL GAP +++L +R+
Sbjct: 317 LGAALLIFADTFARFIVAPAELPIGIVTALFGAPFFLWILIYQRR 361
>gi|106893290|ref|ZP_01360416.1| transport system permease protein:ABC-3 [Clostridium sp. OhILAs]
gi|106775599|gb|EAT32157.1| transport system permease protein:ABC-3 [Clostridium sp. OhILAs]
Length = 344
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 107/331 (32%), Positives = 180/331 (54%), Gaps = 25/331 (7%)
Query: 20 FFLNLVLGSVHIPLRSVWNIVCGS-----AEEPVVWQNIVWKSRVPQSITALVAGAGLSV 74
FFL++ LG I ++ ++ I+ + P V + ++++ R+P+ I A++ G+ L+V
Sbjct: 26 FFLSITLGRYSITIKEIFIILTSKLLQKDIDYPKVMETVIFQVRIPRIIAAMIVGSSLTV 85
Query: 75 SGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAAT 134
SG Q +F+NP+ P +LG S+GA G A ILLS S G+ + +
Sbjct: 86 SGAVYQGMFKNPMVSPDILGTSAGAGFGAALAILLSFSSLGIQATAFMF----------- 134
Query: 135 AGALSVMTLIVFVSQKVKGS---VTLLIIGVMIGYVANAIIGVFKYFSVEED-IRAYVIW 190
G ++V+ ++ KG ++ G+++ V + I + KY + D + A W
Sbjct: 135 -GLIAVLLTYTISTKVGKGGNIMFVFILAGILVSTVFQSFISLSKYVADPYDKLPAITFW 193
Query: 191 GLGSFARVSGNQM-TLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVI 249
+GS A +S + T+ I ++ ++PL FL+ LN L G+ AK LG++ K+ R VI
Sbjct: 194 LMGSLASISQRDVYTILIPFLLGIVPL-FLVRWHLNTLSFGEEEAKALGVDTKKLRFLVI 252
Query: 250 SCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIAR 309
CS +LTA + G V ++GL VPHL R ++ D +VL+PA+ L GS+ LL + IAR
Sbjct: 253 ICSTLLTASSISVAGMVGWVGLIVPHLAR-MVVGPDFKVLLPASALMGSTYLLLVDNIAR 311
Query: 310 MPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+P+ +T+L+GAP +Y+L + RK
Sbjct: 312 SVA-AIEIPLGILTSLVGAPFFIYLLLNTRK 341
>gi|34763547|ref|ZP_00144484.1| Hemin transport system permease protein hmuU [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|27886777|gb|EAA23913.1| Hemin transport system permease protein hmuU [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
Length = 341
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 98/324 (30%), Positives = 165/324 (50%), Gaps = 15/324 (4%)
Query: 23 NLVLGSVHIPLRSVWNIVCGSAE------EPVVWQNIVWKSRVPQSITALVAGAGLSVSG 76
+L G+V +P+ V I+ E + IV+ R P+ + A++ G L++ G
Sbjct: 22 SLFYGAVKVPVSDVIKIILNKTELFNFEISKQSYIPIVFFVRFPRIMVAVIVGGALALCG 81
Query: 77 LQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAG 136
MQ++ +NP+ ++GISSGASLG + L + + L + G AL I+A
Sbjct: 82 CTMQSLLKNPIVDSGIIGISSGASLGAVIAVSLGLTATNIFAMPL-FSGAFALIISAIIY 140
Query: 137 ALSVMTLIVFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFA 196
+S + + ++ L++ G+ IG AI V E +++ Y+ W +GS
Sbjct: 141 KISTL-------RGRTDNLLLILSGIAIGSFVGAITSVILTSLAETEMKEYIFWAMGSLN 193
Query: 197 RVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSGILT 256
+ + IL P+ F K LN+LLLG+ AK+LG+NIK+ R ++ +LT
Sbjct: 194 GRRWEHFFFGLIPIAILSPILFYYGKELNILLLGEEEAKSLGINIKKIRGKILIIIALLT 253
Query: 257 AIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGA 316
AI G + F+GL VPH+ R ++ SD+R L+ ++ L G+ +L++R+
Sbjct: 254 AISVCISGNITFVGLIVPHILRKII-GSDNRKLLKSSFLAGACFLTFSDLLSRIVLAPKE 312
Query: 317 LPVNSITALIGAPIVVYVLFSKRK 340
+ V ITALIGAP +Y++ R+
Sbjct: 313 ISVGIITALIGAPYFIYLIVKIRR 336
>gi|89099447|ref|ZP_01172323.1| ferric ion ABC transpoter (permease) [Bacillus sp. NRRL B-14911]
gi|89085833|gb|EAR64958.1| ferric ion ABC transpoter (permease) [Bacillus sp. NRRL B-14911]
Length = 353
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 101/341 (29%), Positives = 178/341 (52%), Gaps = 22/341 (6%)
Query: 10 IFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPV--------VWQNIVWKSRVPQ 61
+ + +V + + +G+V +P+ S+ NIV GS P+ + NIV R+P+
Sbjct: 19 VLAAAFLVLCMLVGISIGTVSVPIPSIINIV-GSKLLPIQLDASVDPMHSNIVMNIRLPR 77
Query: 62 SITALVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKL 121
I A + GA L+++G Q + RNPLA P LG+SSGAS+G V+ SI
Sbjct: 78 VILAGLVGASLAIAGAAFQGLLRNPLADPYTLGVSSGASVGAVLVLFFQISIP------- 130
Query: 122 GYIGEIALTIAATAGALSVMTLIVFVSQKVKGSV---TLLIIGVMIGYVANAIIGVFKYF 178
+ G L I + + + ++F ++++ ++ T+++ G+++ A+I +
Sbjct: 131 -FAGLFTLPILSMVFSFLTIFAVLFFARRIDRAMKVETIILTGIIVSSFLGALISLMIAL 189
Query: 179 SVEEDIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLG 238
+ EE +R + W +GS + + + + II L + K LN + G+ A++LG
Sbjct: 190 TGEE-LRQIIGWIMGSVSMRGWAYIRIILPFFIIGSLLLMMNAKELNAMSFGEERAQHLG 248
Query: 239 LNIKRARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGS 298
+N++R ++ V+ ILT A G + F+GL +PHL R L DH L+P ++LTG+
Sbjct: 249 VNVQRRKMMVLVAGSILTGAAVAVSGTIGFVGLVIPHLTRRLW-GPDHIHLLPLSMLTGA 307
Query: 299 SLALLCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKR 339
+L +L+AR LP+ IT++IGAP+ +L +R
Sbjct: 308 GFLILADLVARTVISPTELPIGVITSIIGAPVFALILLKRR 348
>gi|77920648|ref|YP_358463.1| ABC-type Fe3+-siderophore transport system, permease component
[Pelobacter carbinolicus DSM 2380]
gi|77546731|gb|ABA90293.1| ABC-type Fe3+-siderophore transport system, permease component
[Pelobacter carbinolicus DSM 2380]
Length = 346
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 175/313 (55%), Gaps = 22/313 (7%)
Query: 27 GSVHIPLRSVWNIVCGSAEEP--VVWQNIVWKSRVPQSITALVAGAGLSVSGLQMQTVFR 84
G+ IP++ V++ + G+A+ VV NI R+P+ I A+V G GLS+SGL +Q++ +
Sbjct: 47 GAYPIPIKGVFSALTGTADAATGVVITNI----RLPRVIAAIVCGWGLSLSGLSIQSLLK 102
Query: 85 NPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGALSVMTLI 144
NPL PS LGIS GA+ G A+ I+ GS G +++ +IG +A T + ++
Sbjct: 103 NPLGSPSTLGISQGAAFGAAAAIVFWGS-GMFSVTTFAFIGAMAAT----------LVVL 151
Query: 145 VFVSQKVKGSVTLLIIGVMIGYVANAIIGVFKYFSVEEDIRAYVIWGLGSFARVSGNQMT 204
V K S +++ GV + + + + +Y + E ++ V W G AR N M
Sbjct: 152 VLSGLKRLSSEAVILAGVALSSLFVSATILIQYLATETELAMVVFWAFGDVAR--SNWME 209
Query: 205 LFIYIMIILLPLSFLLIK--TLNLLLLGDGYAKNLGLNIKRARLYVISCSGILTAIVTAY 262
+ I ++LL +L+ LN L G+ AK LG+NI R+ + + +++A+ TA+
Sbjct: 210 IGIMTGVVLLASLYLMAIRWDLNALASGEETAKGLGVNIGSIRVSGMVAAALVSAMATAF 269
Query: 263 CGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGFEGALPVNSI 322
G + F+GL PH+ R L+ DHR+L+P + + G+ L L + + R+ GALPV I
Sbjct: 270 HGVIAFIGLIAPHMARRLV-GDDHRLLIPFSSVLGALLLLTADTVGRLVIGSGALPVGVI 328
Query: 323 TALIGAPIVVYVL 335
T+ +GAP+ +Y+L
Sbjct: 329 TSFLGAPLFLYLL 341
>gi|78356666|ref|YP_388115.1| iron(III) dicitrate transport system permease protein
[Desulfovibrio desulfuricans G20]
gi|78219071|gb|ABB38420.1| iron(III) dicitrate transport system permease protein
[Desulfovibrio desulfuricans G20]
Length = 356
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 103/338 (30%), Positives = 182/338 (53%), Gaps = 5/338 (1%)
Query: 6 VLVLIFISVSIVFFFFLNLVLGSVHIPLRSVWNIVCGSAEEPVVWQNIVWKSRVPQSITA 65
V+ L +S +++ +++ G+ IPL SV + G + + I+W R+PQ+++A
Sbjct: 20 VVFLCGVSAALLAALVVSVSSGAADIPLGSVVRSLAGLGADART-EAIIWNIRLPQALSA 78
Query: 66 LVAGAGLSVSGLQMQTVFRNPLAGPSVLGISSGASLGVA--SVILLSGSIGGVALSKLGY 123
+VAGAGL+V+G MQ + RNPL P LGIS A+ G A ++L G++ A +
Sbjct: 79 IVAGAGLAVAGAAMQAILRNPLGSPFTLGISHAAAFGAAFSVMVLGGGAMTSTAAGAVSV 138
Query: 124 IGEIALTIAATAGALSVMTLIVFVSQKVKGSV-TLLIIGVMIGYVANAIIGVFKYFSVEE 182
+ T AA A +LS +I+ VS+ S T+++ GV +G + A ++F+ +
Sbjct: 139 TSPLMTTAAAFACSLSAALVIIAVSRLRGASPETMVLTGVALGALFTAGTMFLQFFADDV 198
Query: 183 DIRAYVIWGLGSFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIK 242
+ A V W G AR + ++ + + N + GD A LG+ +
Sbjct: 199 QLAAIVFWTFGDTARATWTELAVLALTTAACSVYFLSNVWNYNAIDAGDETAMGLGVRVG 258
Query: 243 RARLYVISCSGILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLAL 302
R RL + + +LTA++ A+ G + F+GL VPH+ R ++ +DHR L+PA++ G+ + L
Sbjct: 259 RVRLTGMLVASLLTAVIIAFLGIIGFVGLVVPHMVRRVI-GADHRFLLPASVAGGALILL 317
Query: 303 LCNLIARMPGFEGALPVNSITALIGAPIVVYVLFSKRK 340
+ + AR+ LPV+ +T+ +GAP+ ++++ RK
Sbjct: 318 VSDTAARLILAPHVLPVSVLTSFMGAPVFIWLIVRGRK 355
>gi|28210670|ref|NP_781614.1| iron(III) dicitrate transport system permease protein fecD
[Clostridium tetani E88]
gi|28203108|gb|AAO35551.1| iron(III) dicitrate transport system permease protein fecD
[Clostridium tetani E88]
Length = 377
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 95/325 (29%), Positives = 171/325 (52%), Gaps = 20/325 (6%)
Query: 26 LGSVHIPLRSVWNIV------CGSAEEPVVWQ--NIVWKSRVPQSITALVAGAGLSVSGL 77
+GSV IP+ V+ I+ E + Q +I+W+ R+P+ + +V G GL++ G+
Sbjct: 57 IGSVKIPVADVYRIILYKIFGIKGLESAIQGQFVDIIWQIRLPRVLLGVVVGMGLALGGV 116
Query: 78 QMQTVFRNPLAGPSVLGISSGASLGVASVILLSGSIGGVALSKLGYIGEIALTIAATAGA 137
MQ +NPLA P +LGISSGA LG IL+ +I G + + A GA
Sbjct: 117 VMQATVQNPLADPYILGISSGAILGATFFILVGSNI------LTGTFQSVGIAFWAFIGA 170
Query: 138 LSVMTLIVFVSQKVKGSVT---LLIIGVMIGYVANAIIGVFKYFSVEED-IRAYVIWGLG 193
L + +++VF + G +T L++ G+++ + +A + Y + + + +R+ W +G
Sbjct: 171 L-MSSIMVFKLSSIGGRITSTKLVLSGMVVSIICSAFSSLMVYLTNDNNAVRSISEWAMG 229
Query: 194 SFARVSGNQMTLFIYIMIILLPLSFLLIKTLNLLLLGDGYAKNLGLNIKRARLYVISCSG 253
S + + I IL+ + +N +LLGD A LG+++ + R +
Sbjct: 230 SLTGGKWSNLWFPTIITFILIAFFLCQYRIMNTMLLGDEAAITLGIDLSKYRKLYMIMVS 289
Query: 254 ILTAIVTAYCGPVIFLGLAVPHLCRGLLRTSDHRVLMPAAILTGSSLALLCNLIARMPGF 313
ILT ++ + CG + F+GL +PH+ R L+ S+H+ +P AIL G + +++AR+
Sbjct: 290 ILTGVLVSSCGIIGFIGLVIPHITRSLV-GSNHKNNLPVAILIGGIFLVWADVLARIILK 348
Query: 314 EGALPVNSITALIGAPIVVYVLFSK 338
+P+ IT++IGAP +Y++ +
Sbjct: 349 NMEMPIGIITSVIGAPFFIYIILKR 373
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.327 0.142 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,171,169,075
Number of Sequences: 5470121
Number of extensions: 49071727
Number of successful extensions: 230562
Number of sequences better than 1.0e-05: 500
Number of HSP's better than 0.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 878
Number of HSP's that attempted gapping in prelim test: 222668
Number of HSP's gapped (non-prelim): 2630
length of query: 345
length of database: 1,894,087,724
effective HSP length: 133
effective length of query: 212
effective length of database: 1,166,561,631
effective search space: 247311065772
effective search space used: 247311065772
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 130 (54.7 bits)