| 5 proteins |
S | KOG3245 | Uncharacterized conserved protein |
|---|
91 letters dme
390 = 7298161 (91) = dme
105 = At5g67490 (226) =
hsa
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 7298161
(91 letters)
Database: kyvama
112,920 sequences; 47,500,486 total letters
Score E
Sequences producing significant alignments: (bits) Value
7298161 154 2e-38
7297325 97 6e-21
Hs21687135 66 1e-11
Hs17463505 66 1e-11
At5g67490 45 3e-05
Hs20536800 27 7.4
CE03622 27 9.7
# >7298161
# Length = 91
#
# Score = 154 bits (390), Expect = 2e-38
# Identities = 74/91 (81%), Positives = 74/91 (81%)
#
# Query: 1 METPANRQRVELPPNPEEKLSKRYLAFREKLRSXXXXXXXXXXXXXXXXXKEPLKPWPNN 60
# METPANRQRVELPPNPEEKLSKRYLAFREKLRS KEPLKPWPNN
# Sbjct: 1 METPANRQRVELPPNPEEKLSKRYLAFREKLRSEAPLEPLPECAPHPAHEKEPLKPWPNN 60
#
# Query: 61 TNPYTGEIGGQAGPEPTRYGDWERKGRVTDF 91
# TNPYTGEIGGQAGPEPTRYGDWERKGRVTDF
# Sbjct: 61 TNPYTGEIGGQAGPEPTRYGDWERKGRVTDF 91
#
#
# >7297325
# Length = 82
#
# Score = 97.1 bits (240), Expect = 6e-21
# Identities = 43/71 (60%), Positives = 51/71 (71%)
#
# Query: 21 SKRYLAFREKLRSXXXXXXXXXXXXXXXXXKEPLKPWPNNTNPYTGEIGGQAGPEPTRYG 80
# +++ +AF++KLR+ KEPLKPWPN TNPYTGEIGG AGPEPTRYG
# Sbjct: 12 TEKLMAFQKKLRAKTPLGKLDEFSRHPYQEKEPLKPWPNQTNPYTGEIGGPAGPEPTRYG 71
#
# Query: 81 DWERKGRVTDF 91
# DWERKGRV+DF
# Sbjct: 72 DWERKGRVSDF 82
#
#
# >Hs21687135
# Length = 108
#
# Score = 65.9 bits (159), Expect = 1e-11
# Identities = 28/41 (68%), Positives = 32/41 (77%)
#
# Query: 51 KEPLKPWPNNTNPYTGEIGGQAGPEPTRYGDWERKGRVTDF 91
# KEPL+ +P++ NP T E GG GPEPTRYGDWERKGR DF
# Sbjct: 68 KEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 108
#
#
# >Hs17463505
# Length = 108
#
# Score = 65.9 bits (159), Expect = 1e-11
# Identities = 28/41 (68%), Positives = 32/41 (77%)
#
# Query: 51 KEPLKPWPNNTNPYTGEIGGQAGPEPTRYGDWERKGRVTDF 91
# KEPL+ +P++ NP T E GG GPEPTRYGDWERKGR DF
# Sbjct: 68 KEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 108
#
#
# >At5g67490
# Length = 226
#
# Score = 45.1 bits (105), Expect = 3e-05
# Identities = 18/24 (75%), Positives = 20/24 (83%)
#
# Query: 62 NPYTGEIGGQAGPEPTRYGDWERK 85
# N TGEIGG GPEPTRYGDWE++
# Sbjct: 79 NEDTGEIGGPRGPEPTRYGDWEQR 102
#
#
# >Hs20536800
# Length = 378
#
# Score = 26.9 bits (58), Expect = 7.4
# Identities = 14/37 (37%), Positives = 22/37 (58%), Gaps = 4/37 (10%)
#
# Query: 51 KEPLK---PWPNNTNPYTGEIGGQAGPEPTRYGDWER 84
# ++PLK P+PNN P +G + G+A E G+W +
# Sbjct: 124 RQPLKQMQPFPNNP-PSSGLLFGEAAREEVVQGEWAK 159
#
#
# >CE03622
# Length = 300
#
# Score = 26.6 bits (57), Expect = 9.7
# Identities = 11/36 (30%), Positives = 19/36 (52%)
#
# Query: 52 EPLKPWPNNTNPYTGEIGGQAGPEPTRYGDWERKGR 87
# +P +P P+ N + G+ G Q P P + D + G+
# Sbjct: 183 QPGQPGPHGPNGHPGKPGSQGPPGPPGHSDEPKPGQ 218
#
#
Database: kyvama
Posted date: Nov 8, 2002 2:42 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Lambda K H
0.311 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,106,356
Number of Sequences: 112920
Number of extensions: 279325
Number of successful extensions: 444
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 437
Number of HSP's gapped (non-prelim): 7
length of query: 91
length of database: 47,500,486
effective HSP length: 67
effective length of query: 24
effective length of database: 39,934,846
effective search space: 958436304
effective search space used: 958436304
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)
S2: 57 (26.6 bits)