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UniSTS:63161 Links
D18S56
Homo sapiens chromosome 18, polymorphic
Pan troglodytes chromosome 18

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:TATCTCCTGAAGGACCTGCC
Reverse primer:CTGCCAGTTGTATAAACGCC
PCR product size:196-209 (bp), Homo sapiens
GenBank Accession:Z16631

   Homo sapiens
Name: D18S56
Also known as: 123YA1 AFM123ya1 GC378-D18S56 GDB:188034 HS123YA1
Polymorphism info: on genetic map

Cross References Help

Mapping InformationHelp
D18S56 Sequence Map: Chr 18|Celera Map Viewer
  Position: 25103653-25103859 (bp)
 
D18S56 Sequence Map: Chr 18|HuRef Map Viewer
  Position: 25151521-25151727 (bp)
 
D18S56 Sequence Map: Chr 18 Map Viewer
  Position: 26549501-26549707 (bp)
 
AFM123ya1 Genethon Map: Chr 18 Map Viewer
  Position: 56.70 (cM)
 
AFM123ya1 Marshfield Map: Chr 18 Map Viewer
  Position: 56.71 (cM)
 
AFM123ya1 NCBI RH Map: Chr 18 Map Viewer
  Position: 366.3 (cR)
  Lod score: 2.71
 
D18S56 Whitehead-RH Map: Chr 18 Map Viewer
  Position: 266.6 (cR3000)
  Lod score: P0.84
 
D18S56 Whitehead-YAC Map: Chr 18 Map Viewer
  Reference Interval: WC18.2

Electronic PCR results Help
Genomic (5 of 9)[Show All Hits]
Z16631.1 40 .. 236 (197 bp)  
L02016.1 56 .. 256 (201 bp)  
AC090506.7 118459 .. 118665 (207 bp)  
CH003465.1 24008603 .. 24008809 (207 bp)  
CH003513.1 28675917 .. 28676123 (207 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AP001794.3 68263 .. 68469 (207 bp)  
 
Working Draft phase 2 (from GenBank HTGS division) (1)
AC068180.3 11221 .. 11419 (199 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01158558.1 45981 .. 46187 (207 bp)  
AADC01134214.1 121964 .. 122170 (207 bp)  
AADB02019479.1 224290 .. 224496 (207 bp)  
ABBA01022521.1 407877 .. 408083 (207 bp)  
 

   Pan troglodytes
Name: D18S56
Polymorphism info:  
Mapping InformationHelp
D18S56 Sequence Map: Chr 18 Map Viewer
  Position: 26609036-26609242 (bp)

Electronic PCR results Help
Genomic (2)
BV626848.1 475 .. 663 (189 bp)  
CM000332.1 26609036 .. 26609242 (207 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01092771.1 4714 .. 4926 (213 bp)  
AACZ02176929.1 48766 .. 48972 (207 bp)  
 

 

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