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UniSTS:50441 Links
D12S93
Homo sapiens chromosome 12, locus SAX1, polymorphic
Macaca mulatta chromosome 11
Pan troglodytes chromosome 12

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:GCTGGTGGACACTGAGTTTG
Reverse primer:CATCACCTCTTGTGGCTTCT
PCR product size:271-291 (bp), Homo sapiens
GenBank Accession:Z16912

   Homo sapiens
Name: D12S93
Also known as: 205VE5 AFM205ve5 GDB:188320 HS205VE5
Polymorphism info: on genetic map

Cross References Help
Gene GeneID:114610
 Symbol:SAX1
 Description:spastic ataxia 1 (autosomal dominant)
 Position:12p13

Mapping InformationHelp
D12S93 Sequence Map: Chr 12|HuRef Map Viewer
  Position: 5186873-5187159 (bp)
 
D12S93 Sequence Map: Chr 12 Map Viewer
  Position: 5201115-5201393 (bp)
 
D12S93 Sequence Map: Chr 12|Celera Map Viewer
  Position: 6951763-6952045 (bp)
 
D12S93 deCODE Map: Chr 12 Map Viewer
  Position: 15 (cM)
 
AFM205ve5 Genethon Map: Chr 12 Map Viewer
  Position: 13.80 (cM)
 
AFM205ve5 Marshfield Map: Chr 12 Map Viewer
  Position: 12.60 (cM)
 
D12S93 Whitehead-RH Map: Chr 12 Map Viewer
  Position: 59.3 (cR3000)
  Lod score: P0.00
 
D12S93 Whitehead-YAC Map: Chr 12 Map Viewer
  Reference Interval: WC12.0

Electronic PCR results Help
Genomic (5 of 8)[Show All Hits]
Z16912.1 12 .. 298 (287 bp)  
AC006206.3 37194 .. 37472 (279 bp)  
CH003459.1 5408490 .. 5408776 (287 bp)  
CH003507.1 5243708 .. 5243991 (284 bp)  
CH471116.2 5155345 .. 5155627 (283 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01120983.1 15553 .. 15839 (287 bp)  
AADC01103338.1 115932 .. 116215 (284 bp)  
AADB02014550.1 253635 .. 253917 (283 bp)  
ABBA01048755.1 257516 .. 257802 (287 bp)  
 

   Macaca mulatta
Name: D12S93
Polymorphism info:  
Mapping InformationHelp
D12S93 Sequence Map: Chr 11 Map Viewer
  Position: 5348771-5349032 (bp)
 
D12S93 RH Map: Chr 11 Map Viewer
  Position: 43.5 (cR)
  Lod score: 2.31

   Pan troglodytes
Name: D12S93
Polymorphism info:  
Mapping InformationHelp
D12S93 Sequence Map: Chr 12 Map Viewer
  Position: 5405876-5406187 (bp)

Electronic PCR results Help
Genomic (1)
CM000326.1 5405876 .. 5406187 (312 bp)  
 
Whole Genome Shotgun sequences (3)
AADA01325563.1 1480 .. 1799 (320 bp)  
AADA01011692.1 20330 .. 20641 (312 bp)  
AACZ02131623.1 50200 .. 50511 (312 bp)  
 

 

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