| Submitted SNP(ss) Report in Submission Format |
SNP: Handle|local_snp_id: SI_MHC_SNP | AL671277.5_35875_GT
NCBI Assay Id(ss#): ss12681865
Reference SNP Id(rs#): rs2735086
Batch Detail:
Submitter Handle: SI_MHC_SNP
Submitter Batch ID: 2005_03_29
Entry Date: Mar 29, 2005
Molecular type: Genomic
No. of Chromosomes sampled: 4
Synonym defined:
Organism: Homo sapiens
Population: Not submitted
Submitter Method ID: MHC_XM20030904
Citation:
1. Complete MHC Haplotype Sequencing for Common Disease Gene Mapping
View citation details:[1]
SubSNP Detail:
NCBI Assay ID: ss12681865
Submitter SNP ID: AL671277.5_35875_GT
Synonyms:
LOCUSID: Not submitted
Submitter STS ID: Not submitted
STS Accession: Not submitted
GenBanK Accession: AL671277.5
Comment:
sequence: CR759913.4
position: 60140
quality: [40]
sequence: CR388220.8
position: 115932
quality: [40]
sequence: AL645935.7
position: 65240
quality: [40]
Gene Name:
Length: 801
Flanking Sequence Information:
5' Assay: GAGTTGGCTT GTATCCTGCC TAGTCATGAG GCACCATCTC TGTCTATCAA CACTTACTCT
TTTGTAAAGA ACTTGTGAAA ATGAAGGACA AATTTATCAC CTTCATTGGA GTCATGGGAA
CCTGACTCCC AGCAGTCACA GGTCAGGGGA AGGTACCCGC AGAGGACAGA CCTCACTAGG
ACAATTAGTC CAGTTTCAAC ACATCCTCTT ACCTAGGGTT TCCTGATTCT GACCTGGGTC
TGCAGTCACA GTTCTGGACA CTCCTCTGGG ATCTCATGAC CCTGCTTCCT CCCTGGCCTT
TCACAGTTTA TTTTCTTTCC ACAGATGGAA AAGGAGGCAG CTATGCTAAG GCTTCATGCA
AGTGTGGTAG GGGTGGGAAG AGTGATCCCT GAGATCCTTG
Observed: G/T
3' Assay: GATAGTGTAG ACAGGAGCCC ATGGGGGAGC TCACCACCCC AAAATTCCTC CTTTAGTCAC
ATCATCTGTG GGCTCTGACC AGATTTTGTT TTTGTTCCAC CCGAAACAGG GACAGTACCC
AGGGCTCTGA TGTGTCTCTC AAGGCTTGTA AAATGACAAC TTAGGGGGCC TGAAGGGAAG
GAGGAGTTGG GGCATAGGGG ACACAACTAG GCTCTGGAGA TTCTTTGATT TGGAATTTTT
CAGGGTGTGG TGGGCTGTTC AGTGTCACAA CTTACTATGA CTGATCTGAA TTTGTTCATG
ACTATTTTTT TTCTAAGACT GCCTTGTGAG GGACTGAGAT GCAAGATTTG TTCATGCCTC
CCCTTTGTGA CTTCAAGGGC CTCTGTCTTC TCTTTCTGCC
|
GENERAL: Contact Us | Homepage | Announcements
|dbSNP Summary | Genome
| FTP SERVER | Build
History | Handle Request
DOCUMENTATION: FAQ
| Searchable FAQ Archive | Overview |
How to Submit | RefSNP
Summary Info | Database
Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query |
By Submitter |New
Batches | Method | Population
| Publication
| Batch
| Locus Info | Between
Marker
HAPLOTYPE:Submission | Specifications | Sample HapSet |
Sample Individual
NCBI: PubMed | Entrez |
BLAST | OMIM | Taxonomy
| Structure
Disclaimer Privacy statement
Revised:
May 25, 2006 1:38 PM
.