MannDB Proteome Browser

Current statistics as of 01/03/07 10:59:16

Category Organism Count Single Chain Protein Count
bacterium 89 159698
helminth 4 49
protozoan 2 66
unknown 2 5036
virus 171 4357
Total 268 169206


rp = reference proteome
scp = single chain protein

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Reference Proteome List

Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
bacterium
gram_positive		 Bacillus anthracis str. A2012 plasmid pXO1 proteome Jun 02 2005 04:47PM 2244 204 102141 102344 antigenic, BlastProDom, Coil, coils, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, swissprot, tmhmm, toppred, virprot 06/07/05 08/17/06
bacterium
gram_positive		 Bacillus anthracis str. A2012 plasmid pXO2 proteome Jun 02 2005 04:53PM 2245 104 102345 102448 antigenic, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, swissprot, tmhmm, toppred, virprot 06/07/05 08/17/06
bacterium
gram_positive		 Bacillus anthracis str. A2012 proteome Nov 09 2005 02:38PM 2442 5354 123701 129054 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, swissprot, tmhmm, toppred, virprot 12/12/05 08/17/06
bacterium
gram_positive		 Bacillus anthracis str. Ames Ancestor plasmid pXO1 proteome Jun 02 2005 05:16PM 2247 204 107758 107961 antigenic, coils, hmmtop, pepstats, predict_protein, psort, swissprot, tmhmm, toppred, virprot 06/08/05 08/17/06
bacterium
gram_positive		 Bacillus anthracis str. Ames Ancestor plasmid pXO2 proteome Jun 02 2005 05:19PM 2248 104 107962 108065 antigenic, coils, hmmtop, pepstats, predict_protein, psort, swissprot, tmhmm, toppred, virprot 12/09/05 08/17/06
bacterium
gram_positive		 Bacillus anthracis str. Ames Ancestor proteome Jun 02 2005 04:58PM 2246 5309 102449 107757 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, swissprot, tmhmm, toppred, virprot 06/07/05 08/17/06
bacterium
gram_positive		 Bacillus anthracis str. Ames proteome Feb 02 2004 06:22PM 27 5311 53573 58883 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 03/29/04 08/11/06
bacterium
gram_positive		 Bacillus anthracis str. Pasteur plasmid pXO2 proteome May 17 2004 03:57PM 149 84 86167 86250 BlastProDom, Coil, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 05/18/04 08/14/06
bacterium
gram_positive		 Bacillus anthracis str. Sterne plasmid pXO1 proteome May 17 2004 03:41PM 148 142 85941 86082 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMSmart, HMMTigr, hmmtop, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 05/18/04 08/14/06
bacterium
gram_positive		 Bacillus anthracis str. Sterne proteome Jun 02 2005 05:23PM 2249 5287 108066 113352 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, swissprot, tmhmm, toppred, virprot 06/08/05 08/17/06
bacterium
gram_positive		 Bacillus cereus ATCC 10987 Dec 06 2005 03:43PM 2565 5603 153905 159507 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/13/05 08/01/06
bacterium
gram_positive		 Bacillus thuringiensis serovar konkukian str. 97-27 Dec 06 2005 04:05PM 2566 5117 159508 164624 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/13/05 08/01/06
bacterium
gram_negative		 Borrelia burgdorferi plasmid proteome Apr 09 2004 10:55AM 85 6 9049 9054 antigenic, Coil, HMMPfam, HMMPIR, HMMTigr, hmmtop, pepstats, predict_protein, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred 04/21/04 12/12/05
bacterium
gram_negative		 Borrelia burgdorferi proteome Dec 22 2003 02:01PM 3 851 8198 9048 antigenic, bimasmhc, BlastProDom, Coil, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 01/08/04 08/08/06
bacterium
gram_negative		 Brucella abortus 9-941 chrom 1 proteome May 18 2005 12:45PM 2202 2030 94261 96290 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 06/07/05 08/14/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
bacterium
gram_negative		 Brucella abortus 9-941 chrom 2 proteome May 18 2005 12:45PM 2203 1055 96291 97345 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred 06/08/05 07/17/06
bacterium
gram_negative		 Brucella melitensis 16M chromosome I proteome Feb 02 2004 04:21PM 25 2059 26286 28344 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 03/31/04 08/08/06
bacterium
gram_negative		 Brucella melitensis 16M chromosome II proteome Mar 23 2004 01:32PM 68 1139 63511 64649 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred 03/31/04 08/11/06
bacterium
gram_negative		 Brucella melitensis suis 1330 chrom I proteome Mar 23 2004 01:38PM 70 2116 60247 62362 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, swissprot, tmhmm, toppred, virprot 04/09/04 08/11/06
bacterium
gram_negative		 Brucella melitensis suis 1330 chrom II proteome Mar 23 2004 01:40PM 71 1148 62363 63510 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred 04/09/04 08/11/06
bacterium
gram_negative		 Burkholderia mallei ATCC 23344 chromosome 1 proteome May 31 2005 03:32PM 2222 2996 97361 100356 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, netmhc, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 06/01/05 08/14/06
bacterium
gram_negative		 Burkholderia mallei ATCC 23344 chromosome 2 proteome May 31 2005 03:37PM 2223 1768 100357 102124 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred 06/01/05 07/05/06
bacterium
gram_negative		 Burkholderia pseudomallei K96243 chromosome I Dec 02 2005 04:27PM 2466 3460 144759 148218 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, ScanRegExp, Seg, signalp, superfamily, tmhmm, toppred, virprot 12/13/05 08/14/06
bacterium
gram_negative		 Burkholderia pseudomallei K96243 chromosome II Dec 02 2005 04:35PM 2467 2395 148219 150613 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred 12/13/05 07/17/06
bacterium
gram_negative		 Campylobacter jejuni NCTC 11168 proteome Mar 22 2004 09:43AM 61 1654 64650 66303 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 04/01/04 08/17/06
bacterium
gram_negative		 Campylobacter jejuni subsp. jejuni 81-176 Apr 14 2006 03:37PM 3042 53 217341 217393 antigenic, coils, hmmtop, pepstats, predict_protein, psort, signalp, tmhmm, toppred, virprot 04/18/06 08/23/06
bacterium
gram_positive		 Clostridium baratii BONTOXILYSIN toxins from virulence Mar 03 2005 10:07AM 2083 4 87130 113362 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPfam, hmmtop, pepstats, predict_protein, psort, ScanRegExp, Seg, superfamily, virprot 11/05/04 08/08/06
bacterium
gram_positive		 Clostridium botulinum BONTOXILYSIN toxins from virulence Nov 01 2004 04:21PM 202 48 87121 93827 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, hmmtop, netchop, netmhc, pepstats, predict_protein, psort, ScanRegExp, Seg, superfamily, swissprot, toppred, virprot 11/01/04 08/14/06
bacterium
gram_positive		 Clostridium botulinum plasmid proteome Apr 09 2004 11:16AM 92 8 18742 18749 antigenic, BlastProDom, Coil, coils, HMMPfam, HMMSmart, HMMTigr, hmmtop, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, tmhmm, toppred 04/16/04 12/12/05
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
bacterium
gram_positive		 Clostridium botulinum proteome Apr 09 2004 11:15AM 91 3281 15461 18741 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, tmhmm, toppred, virprot 04/16/04 08/22/06
bacterium
gram_positive		 Clostridium butyricum BONTOXILYSIN toxins from virulence Mar 03 2005 10:07AM 2082 4 87126 87162 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, hmmtop, pepstats, predict_protein, psort, ScanRegExp, Seg, superfamily, swissprot, toppred, virprot 11/01/04 08/08/06
bacterium
gram_positive		 Clostridium perfringens 13 proteome Mar 22 2004 09:45AM 62 2660 10941 13600 antigenic, bimasmhc, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 04/02/04 08/11/06
bacterium
gram_positive		 Clostridium tetani BONTOXILYSIN toxins from virulence Mar 03 2005 10:08AM 2084 3 87132 87156 antigenic, BlastProDom, Coil, FPrintScan, HMMPfam, hmmtop, pepstats, psort, ScanRegExp, Seg, superfamily, swissprot, virprot 11/01/04 08/08/06
bacterium
gram_negative		 Coxiella burnetti RSA 493 proteome Mar 22 2004 09:46AM 63 2009 66304 68312 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 04/05/04 08/11/06
bacterium
gram_negative		 Ehrlichia ruminantium str. Welgevonden Dec 06 2005 04:25PM 2571 888 164668 165555 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred 12/13/05 07/31/06
bacterium
gram_negative		 Escherichia coli O157:H7 plasmid pO157 Apr 14 2006 03:43PM 3043 85 217394 217478 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, tmhmm, toppred, virprot 04/18/06 07/05/06
bacterium
gram_negative		 Francisella tularensis LVS plasmid pOM1 proteome Nov 08 2004 10:34AM 226 4 87600 87603 antigenic, Coil, FPrintScan, HMMPfam, hmmtop, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred 11/08/04 12/12/05
bacterium
gram_negative		 Francisella tularensis LVS proteome Apr 09 2004 11:09AM 89 1693 9241 10933 antigenic, BlastProDom, Coil, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, tmhmm, toppred 04/22/04 12/12/05
bacterium
gram_negative		 Francisella tularensis novicida plasmid pFNL10 Nov 08 2004 10:26AM 225 6 87594 87599 antigenic, Coil, coils, HMMPfam, HMMTigr, hmmtop, pepstats, predict_protein, psort, Seg, superfamily 11/08/04 11/08/04
bacterium
gram_negative		 Francisella tularensis novicida virulence island Jul 27 2005 04:27PM 2322 4 123281 123284 antigenic, BlastProDom, Coil, coils, hmmtop, pepstats, predict_protein, psort, Seg, tmhmm, toppred 07/28/05 12/12/05
bacterium
gram_negative		 Francisella tularensis Schu4 proteome from NCBI Mar 02 2005 03:27PM 2064 1804 91235 93038 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred 03/03/05 08/14/06
bacterium
gram_positive		 Listeria innocua proteome Apr 09 2004 11:48AM 105 2981 23209 26189 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 04/09/04 08/14/06
bacterium
gram_positive		 Listeria monocytogenes EGD-e proteome Apr 09 2004 11:47AM 104 2855 19568 22422 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 04/09/04 08/14/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
bacterium
gram_negative		 Mycoplasma mycoides subsp. mycoides SC str. PG1 Dec 07 2005 03:27PM 2588 1016 165830 166845 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/13/05 08/07/06
bacterium
gram_negative		 Neisseria meningitidis MC58 Dec 07 2005 03:38PM 2591 2063 166862 168924 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/13/05 08/07/06
bacterium
gram_negative		 Ralstonia solanacearum GMI1000 Dec 08 2005 01:11PM 2602 3440 168981 172420 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/13/05 08/08/06
bacterium
gram_negative		 Rickettsia prowazekii Madrid E proteome Mar 22 2004 09:48AM 64 835 68313 69147 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 04/05/04 08/11/06
bacterium
gram_negative		 Salmonella enterica enterica Typhi proteome Mar 22 2004 09:49AM 65 4600 69148 73747 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 04/07/04 08/14/06
bacterium
gram_negative		 Salmonella enterica enterica Typhi Ty2 proteome Mar 22 2004 09:51AM 66 4323 77441 81763 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 04/09/04 08/11/06
bacterium
gram_negative		 Shigella dysenteriae Sd197 Dec 02 2005 04:18PM 2465 4277 140482 144758 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, swissprot, tmhmm, toppred, virprot 12/13/05 08/25/06
bacterium
gram_positive		 Staphylococcus aureus subsp. aureus N315 Dec 05 2005 05:17PM 2544 2588 151065 153652 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/13/05 08/07/06
bacterium
gram_positive		 Streptococcus pyogenes M1 GAS Dec 08 2005 02:17PM 2605 1697 172433 174129 antigenic, hmmtop, pepstats, psort, tmhmm, toppred, virprot 12/13/05 08/08/06
bacterium
gram_negative		 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I Jun 29 2006 04:10PM 3082 2742 217561 220302 antigenic, bimasmhc, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, tmhmm, toppred, virprot 07/05/06 08/23/06
bacterium
gram_negative		 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II Jun 29 2006 04:14PM 3083 1093 220303 221395 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, ProfileScan, ScanRegExp, Seg, signalp, superfamily, tmhmm, toppred, virprot 07/05/06 08/23/06
bacterium
gram_negative		 Vibrio fischeri ES114 chromosome I Dec 08 2005 02:33PM 2607 2575 174278 176852 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/13/05 08/11/06
bacterium
gram_negative		 Vibrio fischeri ES114 chromosome II Dec 08 2005 02:40PM 2608 1172 176853 178024 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/13/05 08/11/06
bacterium
gram_negative		 Vibrio parahaemolyticus RIMD 2210633 chromosome I Dec 09 2005 10:57AM 2622 3080 184901 187980 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/13/05 08/23/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
bacterium
gram_negative		 Vibrio parahaemolyticus RIMD 2210633 chromosome II Dec 09 2005 02:29PM 2642 1752 187981 189732 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/13/05 08/23/06
bacterium
gram_negative		 Vibrio vulnificus CMCP6 chromosome I Dec 09 2005 02:35PM 2643 2926 189733 192658 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/13/05 08/23/06
bacterium
gram_negative		 Vibrio vulnificus CMCP6 chromosome II Dec 09 2005 02:44PM 2644 1562 192659 194220 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/13/05 08/23/06
bacterium
gram_negative		 virulence gram negative Nov 22 2005 11:23AM 2445 3626 130453 225985 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 11/22/05 08/25/06
bacterium
gram_positive		 virulence gram positive Nov 22 2005 11:23AM 2444 633 130510 133222 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, swissprot, tmhmm, toppred, virprot 11/22/05 08/23/06
bacterium
gram_negative		 Xanthomonas oryzae pv. oryzae KACC10331 Dec 08 2005 03:31PM 2611 4080 180805 184884 antigenic, hmmtop, pepstats, psort, tmhmm, toppred, virprot 12/13/05 08/23/06
bacterium
gram_negative		 Xylella fastidiosa 9a5c Dec 08 2005 02:49PM 2610 2766 178039 180804 antigenic, hmmtop, pepstats, psort, tmhmm, toppred, virprot 12/13/05 08/11/06
bacterium
gram_negative		 Yersinia enterocolitica 8081 proteome Jun 16 2005 05:22PM 2263 4033 117355 121387 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/12/05 08/02/06
bacterium
gram_negative		 Yersinia pestis 91001 plasmid pCD1 Apr 26 2005 04:16PM 2185 85 94025 94109 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 06/08/05 07/31/06
bacterium
gram_negative		 Yersinia pestis 91001 plasmid pMT1 Apr 26 2005 04:19PM 2186 122 94110 94231 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot 12/12/05 08/02/06
bacterium
gram_negative		 Yersinia pestis 91001 plasmid pPCP1 Apr 26 2005 04:21PM 2187 10 94232 94241 antigenic, BlastProDom, FPrintScan, Gene3D, HMMPfam, HMMSmart, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, toppred, virprot 06/08/05 07/31/06
bacterium
gram_negative		 Yersinia pestis 91001 proteome Apr 26 2004 03:09PM 121 3895 81961 85855 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, virprot 04/27/04 08/14/06
bacterium
 Yersinia pestis Antiqua Nov 14 2006 04:27PM 3183 4167 226021 230187 virprot 11/22/06 11/22/06
bacterium
 Yersinia pestis Antiqua plasmid pCD Dec 22 2006 02:27PM 3203 89 234201 234289 virprot 01/03/07 01/03/07
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
bacterium
 Yersinia pestis Antiqua plasmid pMT Dec 22 2006 02:35PM 3206 99 234403 234501 virprot 01/03/07 01/03/07
bacterium
 Yersinia pestis Antiqua plasmid pPCP Dec 22 2006 02:37PM 3207 9 234502 234510 virprot 01/03/07 01/03/07
bacterium
gram_negative		 Yersinia pestis biovar Medievalis str. 91001 plasmid pCD1 Mar 27 2006 05:50PM 3005 85 213329 213413 antigenic, hmmtop, pepstats, psort, tmhmm, toppred, virprot 03/31/06 01/03/07
bacterium
gram_negative		 Yersinia pestis biovar Medievalis str. 91001 plasmid pMT1 Mar 27 2006 05:49PM 3004 122 213207 213328 antigenic, hmmtop, pepstats, psort, signalp, tmhmm, toppred, virprot 03/31/06 01/03/07
bacterium
gram_negative		 Yersinia pestis biovar Medievalis str. 91001 plasmid pPCP1 Mar 27 2006 05:44PM 3002 10 213081 213090 antigenic, hmmtop, pepstats, psort, signalp, toppred, virprot 03/31/06 01/03/07
bacterium
gram_negative		 Yersinia pestis biovar Medievalis str. 91001 proteome Mar 27 2006 02:00PM 2963 3895 208907 212801 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, tmhmm, toppred, virprot 03/31/06 11/22/06
bacterium
gram_negative		 Yersinia pestis CO92 plasmid pCD1 Mar 27 2006 02:24PM 2965 72 212903 212974 antigenic, hmmtop, pepstats, psort, tmhmm, toppred, virprot 03/31/06 01/03/07
bacterium
gram_negative		 Yersinia pestis CO92 plasmid pMT1 Mar 27 2006 02:17PM 2964 101 212802 212902 antigenic, hmmtop, pepstats, psort, signalp, tmhmm, toppred, virprot 03/31/06 01/03/07
bacterium
gram_negative		 Yersinia pestis CO92 plasmid pPCP1 Mar 27 2006 02:26PM 2966 9 212975 212983 antigenic, hmmtop, pepstats, psort, signalp, toppred, virprot 03/31/06 01/03/07
bacterium
gram_negative		 Yersinia pestis CO92 proteome Mar 27 2006 11:27AM 2944 3885 200934 204818 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, tmhmm, toppred, virprot 03/28/06 11/22/06
bacterium
gram_negative		 Yersinia pestis KIM plasmid pCD1 Mar 27 2006 05:38PM 2982 68 213001 213068 antigenic, hmmtop, pepstats, psort, tmhmm, toppred, virprot 03/31/06 01/03/07
bacterium
gram_negative		 Yersinia pestis KIM plasmid pMT1 Mar 27 2006 05:47PM 3003 116 213091 213206 antigenic, hmmtop, pepstats, psort, signalp, tmhmm, toppred, virprot 03/31/06 01/03/07
bacterium
gram_negative		 Yersinia pestis Kim plasmid pPCP1 Apr 26 2005 04:10PM 2184 9 94016 94024 , antigenic, hmmtop, pepstats, psort, swissprot, toppred, virprot 05/25/05 01/03/07
bacterium
gram_negative		 Yersinia pestis KIM proteome Mar 27 2006 01:36PM 2962 4086 204821 208906 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, tmhmm, toppred, virprot 03/31/06 11/22/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
bacterium
 Yersinia pestis Nepal516 Nov 14 2006 04:40PM 3184 3981 230188 234168 virprot 11/22/06 11/22/06
bacterium
 Yersinia pestis Nepal516 plasmid pMT Dec 22 2006 02:30PM 3204 104 234290 234393 virprot 01/03/07 01/03/07
bacterium
 Yersinia pestis Nepal516 plasmid pPCP Dec 22 2006 02:33PM 3205 9 234394 234402 virprot 01/03/07 01/03/07
bacterium
gram_negative		 Yersinia pseudotuberculosis IP 32953 Mar 29 2006 03:11PM 3022 3901 213421 217321 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, toppred, virprot 06/13/06 08/23/06
helminth Fasciola hepatica mitochondrion Dec 13 2005 03:32PM 2902 12 194541 194552 antigenic, HMMPanther, hmmtop, netnglyc, pepstats, predict_protein, psort, Seg, signalp, targetp, tmhmm, toppred, yinoyang 12/15/05 06/12/06
helminth Paragonimus westermani mitochondrion Dec 13 2005 03:32PM 2903 12 194553 194564 antigenic, FPrintScan, Gene3D, HMMPanther, HMMPfam, hmmtop, netnglyc, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, targetp, tmhmm, toppred, yinoyang 12/15/05 08/01/06
helminth Taenia solium mitochondrion Dec 13 2005 03:34PM 2904 12 194565 194576 antigenic, Gene3D, hmmtop, netnglyc, pepstats, predict_protein, psort, Seg, signalp, superfamily, targetp, tmhmm, toppred, yinoyang 12/15/05 06/12/06
helminth Trichinella spiralis mitochondrion Dec 13 2005 03:36PM 2905 13 194577 194589 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, Seg, signalp, targetp, tmhmm, toppred, yinoyang 12/15/05 06/12/06
protozoan Acanthamoeba castellanii mitochondrion Dec 13 2005 02:02PM 2892 40 194471 194510 antigenic, coils, hmmtop, netnglyc, pepstats, predict_nls, predict_protein, psort, Seg, signalp, targetp, tmhmm, toppred, yinoyang 12/15/05 06/12/06
protozoan Toxoplasma gondii apicoplast Dec 13 2005 02:08PM 2893 26 194511 194536 antigenic, coils, hmmtop, netnglyc, pepstats, predict_nls, predict_protein, psort, Seg, targetp, tmhmm, toppred, yinoyang 12/15/05 06/12/06
unknown SHIGARICIN sequences from virulence Sep 30 2004 09:36PM 181 117 86912 87118 antigenic, coils, FPrintScan, HMMPfam, HMMSmart, hmmtop, netnglyc, netphos, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, virprot, yinoyang 10/04/04 08/22/06
unknown virulence database sync Nov 15 2005 04:25PM 2443 4919 129361 225979 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, netnglyc, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, virprot, yinoyang 11/22/05 08/23/06
virus African horsesickness virus segment 1 Dec 12 2005 03:27PM 2802 1 194381 194381 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, toppred, yinoyang 12/15/05 12/15/05
virus African horsesickness virus segment 10 Dec 13 2005 11:10AM 2848 1 194427 194427 antigenic, coils, hmmtop, pepstats, predict_protein, psort, tmhmm, toppred, yinoyang 12/15/05 12/15/05
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus African horsesickness virus segment 2 Dec 12 2005 05:00PM 2822 1 194401 194401 antigenic, coils, hmmtop, netnglyc, pepstats, predict_nls, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus African horsesickness virus segment 3 Dec 12 2005 05:02PM 2823 1 194402 194402 antigenic, BlastProDom, HMMPfam, hmmtop, netnglyc, pepstats, predict_protein, psort, Seg, superfamily, toppred, yinoyang 12/15/05 06/12/06
virus African horsesickness virus segment 4 Dec 13 2005 10:59AM 2842 1 194421 194421 antigenic, coils, hmmtop, netnglyc, pepstats, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus African horsesickness virus segment 5 Dec 13 2005 11:05AM 2843 1 194422 194422 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, targetp, yinoyang 12/15/05 12/15/05
virus African horsesickness virus segment 6 Dec 13 2005 11:05AM 2844 1 194423 194423 antigenic, coils, hmmtop, netnglyc, pepstats, predict_protein, psort, targetp, yinoyang 12/15/05 12/15/05
virus African horsesickness virus segment 7 Dec 13 2005 11:07AM 2845 1 194424 194424 antigenic, BlastProDom, Gene3D, HMMPfam, hmmtop, netnglyc, pepstats, predict_protein, psort, Seg, superfamily, yinoyang 12/15/05 06/12/06
virus African horsesickness virus segment 8 Dec 13 2005 11:08AM 2846 1 194425 194425 antigenic, hmmtop, pepstats, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus African horsesickness virus segment 9 Dec 13 2005 11:09AM 2847 1 194426 194426 antigenic, hmmtop, pepstats, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus African swine fever virus proteome Apr 09 2004 11:46AM 103 160 19381 19540 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPanther, HMMPfam, HMMSmart, HMMTigr, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, yinoyang 04/09/04 08/14/06
virus Alcelaphine herpesvirus 1 Sep 21 2005 10:29AM 2422 71 123601 123671 antigenic, BlastProDom, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMSmart, HMMTigr, hmmtop, netnglyc, pepstats, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, virprot, yinoyang 11/21/05 06/15/06
virus Bluetongue Virus segment 1 Sep 14 2005 05:42PM 2382 1 123561 123561 antigenic, HMMPfam, hmmtop, netnglyc, pepstats, ProfileScan, psort, toppred, yinoyang 11/21/05 06/15/06
virus Bluetongue Virus segment 10 Sep 15 2005 10:01AM 2409 1 123588 123588 antigenic, BlastProDom, HMMPfam, hmmtop, netnglyc, pepstats, psort, swissprot, tmhmm, toppred, yinoyang 11/21/05 06/15/06
virus Bluetongue Virus segment 2 Sep 14 2005 06:00PM 2383 1 123562 123562 antigenic, BlastProDom, HMMPfam, hmmtop, netnglyc, pepstats, psort, yinoyang 11/21/05 05/01/06
virus Bluetongue Virus segment 3 Sep 15 2005 09:58AM 2402 1 123581 123581 antigenic, BlastProDom, HMMPfam, hmmtop, netnglyc, pepstats, psort, toppred, yinoyang 11/21/05 06/15/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus Bluetongue Virus segment 4 Sep 15 2005 09:59AM 2403 1 123582 123582 antigenic, HMMPfam, hmmtop, netnglyc, pepstats, psort, yinoyang 11/21/05 05/01/06
virus Bluetongue Virus segment 5 Sep 15 2005 09:59AM 2404 1 123583 123583 antigenic, HMMPfam, hmmtop, netnglyc, pepstats, psort, yinoyang 11/21/05 05/01/06
virus Bluetongue Virus segment 6 Sep 15 2005 09:59AM 2405 1 123584 123584 antigenic, HMMPfam, hmmtop, netnglyc, pepstats, psort, yinoyang 11/21/05 05/01/06
virus Bluetongue Virus segment 7 Sep 15 2005 10:01AM 2406 1 123585 123585 antigenic, BlastProDom, FPrintScan, Gene3D, HMMPfam, hmmtop, netnglyc, pepstats, psort, ScanRegExp, Seg, superfamily, swissprot, toppred, yinoyang 11/21/05 06/15/06
virus Bluetongue Virus segment 8 Sep 15 2005 10:01AM 2407 1 123586 123586 antigenic, HMMPfam, hmmtop, pepstats, psort, Seg, yinoyang 11/21/05 05/01/06
virus Bluetongue Virus segment 9 Sep 15 2005 10:01AM 2408 1 123587 123587 antigenic, FPrintScan, HMMPfam, hmmtop, netnglyc, pepstats, psort, yinoyang 11/21/05 05/01/06
virus Bovine enterovirus proteome Apr 09 2004 11:52AM 108 12 58884 58895 antigenic, BlastProDom, coils, FPrintScan, HMMPfam, hmmtop, netnglyc, netphos, netpicorna, pepstats, predict_protein, ProfileScan, psort, Seg, superfamily, targetp, tmhmm, toppred, yinoyang 05/07/04 08/14/06
virus Bovine herpesvirus 1 proteome Aug 15 2005 11:18AM 2343 73 123389 123461 antigenic, BlastProDom, coils, FPrintScan, HMMPanther, HMMPfam, HMMSmart, HMMTigr, hmmtop, netnglyc, pepstats, predict_nls, predict_protein, ProfileScan, psort, signalp, superfamily, swissprot, tmhmm, toppred, yinoyang 08/16/05 08/17/06
virus Bovine herpesvirus 5 proteome Aug 15 2005 11:21AM 2344 73 123462 123534 antigenic, BlastProDom, coils, FPrintScan, HMMPanther, HMMPfam, HMMSmart, HMMTigr, hmmtop, netnglyc, pepstats, predict_nls, predict_protein, ProfileScan, psort, signalp, superfamily, tmhmm, toppred, yinoyang 08/16/05 03/02/06
virus Bovine papular stomatitis virus Dec 05 2005 10:46AM 2505 131 150651 150781 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, netnglyc, pepstats, predict_nls, predict_protein, ProfileScan, psort, Seg, superfamily, targetp, tmhmm, toppred, yinoyang 12/13/05 08/02/06
virus Bovine viral diarrhea virus 1 proteome Sep 09 2005 10:02AM 2362 14 123541 123554 antigenic, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMSmart, hmmtop, netnglyc, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, swissprot, tmhmm, toppred, yinoyang 11/21/05 06/15/06
virus Camelpox virus Dec 05 2005 05:21PM 2545 211 153653 153863 antigenic, BlastProDom, Coil, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot, yinoyang 12/13/05 08/07/06
virus Cercopithecine herpesvirus 1 Dec 07 2005 03:17PM 2586 75 165599 165673 antigenic, coils, HMMPfam, hmmtop, pepstats, predict_nls, predict_protein, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/12/06
virus Classical swine fever virus Dec 05 2005 10:49AM 2506 14 150782 150795 antigenic, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMSmart, hmmtop, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/12/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus Cowpox virus Jul 17 2006 02:34PM 3122 233 221441 221673 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, ProfileScan, ScanRegExp, Seg, superfamily, targetp, tmhmm, toppred, virprot, yinoyang 07/24/06 08/23/06
virus Crimean-Congo hemorrhagic fever virus segment l Dec 05 2005 11:06AM 2513 1 150810 150810 antigenic, hmmtop, pepstats, predict_nls, psort, yinoyang 12/13/05 12/13/05
virus Crimean-Congo hemorrhagic fever virus segment m Dec 05 2005 11:09AM 2514 1 150811 150811 antigenic, hmmtop, pepstats, predict_nls, psort, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Crimean-Congo hemorrhagic fever virus segment s Dec 05 2005 11:10AM 2515 1 150812 150812 antigenic, coils, hmmtop, pepstats, predict_protein, psort, yinoyang 12/13/05 12/13/05
virus Dengue virus type 1 Dec 06 2005 04:11PM 2567 14 164625 164638 antigenic, BlastProDom, coils, Gene3D, HMMPfam, HMMSmart, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/12/06
virus Dengue virus type 2 Dec 06 2005 04:13PM 2568 14 164639 164652 antigenic, BlastProDom, Gene3D, HMMPfam, HMMSmart, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/12/06
virus Dengue virus type 3 Dec 06 2005 04:14PM 2569 1 164653 164653 antigenic, hmmtop, pepstats, predict_protein, psort, tmhmm, yinoyang 12/13/05 12/13/05
virus Dengue virus type 4 Dec 06 2005 04:16PM 2570 14 164654 164667 antigenic, BlastProDom, Gene3D, HMMPfam, HMMSmart, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/12/06
virus Eastern equine encephalitis virus Dec 05 2005 05:11PM 2542 12 151041 151052 antigenic, coils, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMSmart, hmmtop, pepstats, predict_nls, predict_protein, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/12/06
virus Ebola Reston virus proteome Apr 09 2004 10:43AM 81 8 4091 4098 antigenic, bimasmhc, BlastProDom, coils, FPrintScan, HMMPfam, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_protein, ProfileScan, psort, Seg, signalp, targetp, tmhmm, toppred, yinoyang 05/07/04 06/23/06
virus Ebola Zaire virus proteome Apr 09 2004 10:48AM 82 9 4099 4107 antigenic, bimasmhc, BlastProDom, Coil, coils, FPrintScan, HMMPfam, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, yinoyang 12/09/03 08/11/06
virus Foot and mouth disease virus Asia 1 proteome May 17 2004 01:44PM 144 22 85901 121448 antigenic, BlastProDom, FPrintScan, HMMPfam, hmmtop, netnglyc, netphos, netpicorna, pepstats, predict_protein, ProfileScan, psort, Seg, superfamily, toppred, yinoyang 05/18/04 08/14/06
virus Foot and mouth disease virus C proteome May 17 2004 01:54PM 145 15 85909 85923 antigenic, BlastProDom, coils, FPrintScan, HMMPfam, hmmtop, netnglyc, netphos, netpicorna, pepstats, predict_protein, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 05/18/04 08/14/06
virus Foot and mouth disease virus O proteome Jan 27 2004 02:17PM 22 13 26201 26213 antigenic, BlastProDom, FPrintScan, HMMPfam, hmmtop, netnglyc, netphos, netpicorna, pepstats, predict_protein, ProfileScan, psort, Seg, signalp, superfamily, tmhmm, toppred, yinoyang 04/20/04 08/14/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus Foot and mouth disease virus SAT 2 proteome May 17 2004 02:07PM 146 29 85924 121476 antigenic, BlastProDom, coils, FPrintScan, Gene3D, HMMPfam, hmmtop, netnglyc, netphos, netpicorna, pepstats, predict_protein, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 05/18/04 08/14/06
virus Foot-and-mouth disease virus A proteome Jun 20 2005 04:17PM 2282 15 121401 121434 antigenic, BlastProDom, FPrintScan, HMMPfam, hmmtop, netnglyc, netpicorna, pepstats, ProfileScan, psort, Seg, tmhmm, toppred, yinoyang 07/22/05 08/14/06
virus Foot-and-mouth disease virus SAT 3 proteome Jun 20 2005 04:25PM 2285 15 121403 121490 antigenic, FPrintScan, Gene3D, HMMPfam, hmmtop, netnglyc, netpicorna, pepstats, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 07/22/05 08/14/06
virus Foot-and-mouth disease virus SAT1 proteome Jun 20 2005 04:23PM 2284 15 121402 121462 antigenic, BlastProDom, FPrintScan, Gene3D, HMMPfam, hmmtop, netnglyc, netpicorna, pepstats, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 07/22/05 08/14/06
virus Guanarito virus segment l Dec 05 2005 11:02AM 2511 2 150806 150807 antigenic, coils, hmmtop, pepstats, predict_protein, psort, toppred, yinoyang 12/13/05 12/13/05
virus Guanarito virus segment s Dec 05 2005 11:04AM 2512 2 150808 150809 antigenic, coils, hmmtop, pepstats, predict_protein, psort, toppred, yinoyang 12/13/05 12/13/05
virus H-1 parvovirus Dec 07 2005 03:48PM 2595 3 168954 168956 antigenic, Gene3D, HMMPfam, hmmtop, pepstats, predict_protein, psort, superfamily, yinoyang 12/13/05 06/12/06
virus Hantavirus Z10 segment l Dec 05 2005 10:36AM 2502 1 150641 150641 antigenic, coils, hmmtop, pepstats, predict_protein, psort, toppred, yinoyang 12/13/05 12/13/05
virus Hantavirus Z10 segment m Dec 05 2005 10:38AM 2503 1 150642 150642 antigenic, hmmtop, pepstats, predict_protein, psort, tmhmm, yinoyang 12/13/05 12/13/05
virus Hantavirus Z10 segment s Dec 05 2005 10:06AM 2484 1 150625 150625 antigenic, coils, hmmtop, pepstats, predict_protein, psort, tmhmm, toppred, yinoyang 12/13/05 12/13/05
virus Hendra virus proteome Aug 31 2004 10:44AM 163 8 86261 86268 antigenic, BlastProDom, Coil, coils, HMMPfam, hmmtop, netnglyc, pepstats, predict_nls, predict_protein, ProfileScan, psort, Seg, signalp, superfamily, targetp, tmhmm, toppred, yinoyang 08/31/04 06/15/06
virus Hepatitis A virus Dec 07 2005 02:17PM 2582 14 165561 165574 antigenic, Coil, FPrintScan, Gene3D, HMMPfam, hmmtop, netpicorna, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/20/06
virus Hepatitis B virus proteome Apr 09 2004 11:51AM 107 5 26281 26285 antigenic, BlastProDom, coils, HMMPanther, HMMPfam, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, predict_protein, ProfileScan, psort, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, yinoyang 04/09/04 08/08/06
virus Hepatitis C virus Dec 07 2005 03:07PM 2583 12 165575 165586 antigenic, Coil, Gene3D, HMMPfam, HMMSmart, hmmtop, pepstats, predict_nls, predict_protein, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/12/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus Hepatitis delta virus Dec 07 2005 03:12PM 2584 2 165587 165588 antigenic, BlastProDom, Coil, Gene3D, HMMPfam, hmmtop, pepstats, predict_nls, psort, Seg, toppred, yinoyang 12/13/05 06/15/06
virus Hepatitis E virus Dec 07 2005 03:14PM 2585 10 165589 165598 antigenic, HMMPfam, hmmtop, pepstats, predict_protein, ProfileScan, psort, Seg, targetp, tmhmm, toppred, yinoyang 12/13/05 08/14/06
virus Human adenovirus A Dec 05 2005 02:14PM 2522 29 150841 150869 antigenic, BlastProDom, FPrintScan, Gene3D, HMMPfam, HMMPIR, HMMSmart, hmmtop, pepstats, predict_nls, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Human adenovirus B proteome Apr 09 2004 11:49AM 106 40 26221 26260 antigenic, BlastProDom, Coil, FPrintScan, HMMPfam, HMMPIR, HMMSmart, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, yinoyang 04/09/04 08/08/06
virus Human adenovirus C Dec 05 2005 02:16PM 2523 33 150870 150902 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPfam, HMMPIR, HMMSmart, hmmtop, pepstats, predict_nls, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Human adenovirus D Dec 05 2005 02:20PM 2524 30 150903 150932 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPfam, HMMPIR, HMMSmart, hmmtop, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 08/01/06
virus Human adenovirus E Dec 05 2005 02:22PM 2525 37 150933 150969 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPfam, HMMPIR, HMMSmart, hmmtop, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Human adenovirus F Dec 05 2005 02:25PM 2526 34 150970 151003 antigenic, BlastProDom, FPrintScan, Gene3D, HMMPfam, HMMSmart, hmmtop, pepstats, predict_nls, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Human astrovirus Dec 06 2005 03:37PM 2564 10 153895 153904 antigenic, Coil, Gene3D, HMMPfam, hmmtop, pepstats, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 08/14/06
virus Human coronavirus 229E proteome Apr 09 2004 10:50AM 83 8 8181 8188 antigenic, bimasmhc, Coil, coils, HMMPfam, HMMSmart, hmmtop, netcorona, netnglyc, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, yinoyang 04/09/04 06/23/06
virus Human Herpesvirus 1 proteome Apr 09 2004 10:56AM 86 77 9061 9137 antigenic, BlastProDom, coils, FPrintScan, HMMPanther, HMMPfam, HMMSmart, HMMTigr, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, yinoyang 04/09/04 03/02/06
virus Human Herpesvirus 2 proteome Apr 09 2004 11:05AM 87 77 9138 9214 antigenic, BlastProDom, FPrintScan, HMMPanther, HMMPfam, HMMSmart, HMMTigr, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, virprot, yinoyang 04/09/04 08/11/06
virus Human immunodeficiency virus type 1B proteome Apr 09 2004 12:08PM 112 23 59214 59236 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPanther, HMMPfam, HMMSmart, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, yinoyang 04/09/04 08/14/06
virus Human immunodeficiency virus type 2A proteome Apr 09 2004 12:07PM 111 9 59205 59213 BlastProDom, FPrintScan, HMMPanther, HMMPfam, HMMSmart, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, yinoyang 04/09/04 05/01/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus Human metapneumovirus Dec 07 2005 03:33PM 2590 9 166853 166861 antigenic, BlastProDom, HMMPfam, HMMSmart, hmmtop, pepstats, ProfileScan, psort, Seg, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Human papillomavirus type 16 proteome Apr 09 2004 11:32AM 95 8 19276 19283 antigenic, BlastProDom, FPrintScan, HMMPanther, HMMPfam, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, psort, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, virprot, yinoyang 04/09/04 08/08/06
virus Human parainfluenza virus 1 Dec 05 2005 11:16AM 2516 10 150813 150822 antigenic, BlastProDom, Gene3D, HMMPfam, hmmtop, pepstats, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Human parainfluenza virus 2 Dec 05 2005 11:17AM 2517 7 150823 150829 antigenic, BlastProDom, Gene3D, HMMPfam, hmmtop, pepstats, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/19/06
virus Human parainfluenza virus 3 Dec 05 2005 11:20AM 2518 8 150830 150837 antigenic, BlastProDom, FPrintScan, HMMPfam, hmmtop, pepstats, predict_nls, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Human respiratory syncytial virus Dec 05 2005 03:35PM 2535 11 151014 151024 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, predict_nls, ProfileScan, psort, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Human rotavirus (group C / strain Bristol) segment 6 Dec 13 2005 01:29PM 2886 1 194465 194465 antigenic, coils, hmmtop, netnglyc, pepstats, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) segment 1 Dec 05 2005 02:31PM 2527 1 151004 151004 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, psort, yinoyang 12/13/05 05/01/06
virus Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) segment 2 Dec 05 2005 02:35PM 2528 1 151005 151005 antigenic, HMMPfam, hmmtop, pepstats, ProfileScan, psort, toppred, yinoyang 12/13/05 06/15/06
virus Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) segment 3 Dec 05 2005 02:37PM 2529 1 151006 151006 antigenic, HMMPfam, hmmtop, pepstats, psort, yinoyang 12/13/05 05/01/06
virus Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) segment 4 Dec 05 2005 02:39PM 2530 1 151007 151007 antigenic, BlastProDom, FPrintScan, HMMPfam, hmmtop, pepstats, predict_nls, psort, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) segment 5 Dec 05 2005 02:41PM 2531 1 151008 151008 antigenic, HMMPfam, hmmtop, pepstats, predict_nls, psort, yinoyang 12/13/05 05/01/06
virus Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) segment 6 Dec 05 2005 02:42PM 2532 1 151009 151009 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, psort, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) segment 7 Dec 05 2005 02:45PM 2533 2 151010 151011 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, psort, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) segment 8 Dec 05 2005 02:46PM 2534 2 151012 151013 antigenic, BlastProDom, Gene3D, HMMPfam, hmmtop, pepstats, psort, superfamily, yinoyang 12/13/05 05/01/06
virus Influenza B virus segment 1 Dec 12 2005 02:08PM 2782 1 194361 194361 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, targetp, toppred, yinoyang 12/15/05 06/15/06
virus Influenza B virus segment 2 Dec 12 2005 02:13PM 2783 1 194362 194362 antigenic, coils, hmmtop, netnglyc, pepstats, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus Influenza B virus segment 3 Dec 12 2005 02:16PM 2784 1 194363 194363 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus Influenza B virus segment 4 Dec 12 2005 02:19PM 2785 1 194364 194364 antigenic, coils, hmmtop, netnglyc, pepstats, predict_protein, psort, signalp, targetp, tmhmm, toppred, yinoyang 12/15/05 12/15/05
virus Influenza B virus segment 5 Dec 12 2005 02:20PM 2786 1 194365 194365 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus Influenza B virus segment 6 Dec 12 2005 02:21PM 2787 2 194366 194367 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, targetp, tmhmm, toppred, yinoyang 12/15/05 12/15/05
virus Influenza B virus segment 7 Dec 12 2005 02:22PM 2788 2 194368 194369 antigenic, coils, hmmtop, netnglyc, pepstats, predict_protein, psort, targetp, tmhmm, toppred, yinoyang 12/15/05 12/15/05
virus Influenza B virus segment 8 Dec 12 2005 02:24PM 2789 2 194370 194371 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus Influenza C virus segment 1 Dec 12 2005 10:21AM 2702 1 194281 194281 antigenic, hmmtop, netnglyc, pepstats, predict_nls, psort, yinoyang 12/15/05 12/15/05
virus Influenza C virus segment 2 Dec 12 2005 10:22AM 2703 1 194282 194282 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, toppred, yinoyang 12/15/05 06/15/06
virus Influenza C virus segment 3 Dec 12 2005 10:24AM 2704 1 194283 194283 antigenic, hmmtop, netnglyc, pepstats, predict_nls, psort, yinoyang 12/15/05 12/15/05
virus Influenza C virus segment 4 Dec 12 2005 10:25AM 2705 1 194284 194284 antigenic, coils, hmmtop, netnglyc, pepstats, predict_protein, psort, signalp, targetp, tmhmm, toppred, yinoyang 12/15/05 12/15/05
virus Influenza C virus segment 5 Dec 12 2005 10:29AM 2722 1 194301 194301 antigenic, coils, hmmtop, netnglyc, pepstats, predict_nls, predict_protein, psort, yinoyang 12/15/05 12/15/05
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus Influenza C virus segment 6 Dec 12 2005 10:32AM 2742 2 194321 194322 antigenic, HMMPfam, hmmtop, netnglyc, pepstats, predict_protein, psort, signalp, targetp, tmhmm, toppred, yinoyang 12/15/05 06/12/06
virus Influenza C virus segment 7 Dec 12 2005 10:40AM 2762 2 194341 194342 antigenic, HMMPfam, hmmtop, netnglyc, pepstats, predict_protein, psort, yinoyang 12/15/05 06/12/06
virus Japanese encephalitis virus Dec 06 2005 03:30PM 2563 14 153881 153894 antigenic, BlastProDom, Coil, Gene3D, HMMPfam, HMMSmart, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus JC Virus proteome Apr 09 2004 11:34AM 96 6 19284 19289 antigenic, BlastProDom, HMMPfam, HMMSmart, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, toppred, yinoyang 04/09/04 08/08/06
virus Junin virus segment l Dec 05 2005 11:00AM 2510 2 150804 150805 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, predict_nls, ProfileScan, psort, toppred, yinoyang 12/13/05 06/15/06
virus Junin virus segment s Dec 05 2005 10:57AM 2509 4 150800 150803 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, psort, Seg, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus La Crosse virus segment l Dec 12 2005 10:13AM 2682 1 194261 194261 antigenic, coils, hmmtop, netnglyc, pepstats, predict_protein, psort, toppred, yinoyang 12/15/05 12/15/05
virus La Crosse virus segment m Dec 12 2005 10:10AM 2663 1 194243 194243 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, signalp, targetp, tmhmm, toppred, yinoyang 12/15/05 12/15/05
virus La Crosse virus segment s Dec 12 2005 10:08AM 2662 2 194241 194242 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, targetp, toppred, yinoyang 12/15/05 12/15/05
virus Lassa virus segment l proteome Jan 28 2004 11:46AM 24 2 28361 28362 antigenic, BlastProDom, Coil, HMMPfam, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, toppred, yinoyang 02/02/04 03/02/06
virus Lassa virus segment s proteome Jan 28 2004 11:46AM 23 2 26261 26262 antigenic, BlastProDom, coils, HMMPfam, HMMPIR, hmmtop, netnglyc, netphos, pepstats, predict_protein, ProfileScan, psort, Seg, superfamily, swissprot, targetp, tmhmm, toppred, yinoyang 02/02/04 08/08/06
virus Lumpy skin disease virus Dec 07 2005 03:21PM 2587 156 165674 165829 antigenic, BlastProDom, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot, yinoyang 12/13/05 08/07/06
virus Lymphocytic choriomeningitis virus segment l Dec 09 2005 02:54PM 2645 2 194221 194222 antigenic, HMMPfam, hmmtop, pepstats, ProfileScan, psort, Seg, toppred, yinoyang 12/13/05 06/15/06
virus Lymphocytic choriomeningitis virus segment s Dec 09 2005 02:55PM 2646 2 194223 194224 antigenic, BlastProDom, HMMPfam, HMMPIR, hmmtop, pepstats, predict_nls, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus Machupo virus segment l Dec 05 2005 09:50AM 2482 2 150621 150622 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, ProfileScan, psort, toppred, yinoyang 12/13/05 06/15/06
virus Machupo virus segment s Dec 05 2005 09:56AM 2483 2 150623 150624 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, psort, toppred, yinoyang 12/13/05 06/15/06
virus Maize Streak Virus proteome Apr 09 2004 11:34AM 97 5 19290 19294 antigenic, BlastProDom, FPrintScan, HMMPfam, hmmtop, netnglyc, netoglyc, netphos, pepstats, psort, signalp, targetp, tmhmm, toppred, yinoyang 05/07/04 08/08/06
virus Marburg virus proteome Apr 09 2004 11:40AM 98 7 19295 19301 antigenic, BlastProDom, Coil, FPrintScan, HMMPfam, hmmtop, netnglyc, netoglyc, netphos, pepstats, ProfileScan, psort, Seg, signalp, swissprot, targetp, tmhmm, toppred, yinoyang 04/09/04 08/08/06
virus Menangle virus Dec 07 2005 03:32PM 2589 7 166846 166852 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, ProfileScan, psort, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Monkeypox virus strain MPXV_USA2003_039 proteome Mar 29 2005 02:42PM 2123 198 93422 93619 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, netnglyc, netphos, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, targetp, tmhmm, toppred, virprot, yinoyang 04/05/05 08/14/06
virus Monkeypox virus strain Walter Reed 267 proteome Mar 18 2005 04:21PM 2103 177 93232 93408 antigenic, BlastProDom, FPrintScan, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, netnglyc, netphos, pepstats, predict_nls, ProfileScan, ScanRegExp, Seg, signalp, superfamily, targetp, tmhmm, toppred, virprot, yinoyang 03/18/05 08/14/06
virus Monkeypox Virus strain Zaire-96-I-16 proteome Mar 18 2005 03:48PM 2102 191 93041 93231 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, netnglyc, netphos, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, virprot, yinoyang 03/18/05 08/22/06
virus Mumps virus proteome Apr 09 2004 11:41AM 99 8 19302 19309 antigenic, BlastProDom, Coil, HMMPfam, hmmtop, netnglyc, netoglyc, netphos, pepstats, ProfileScan, psort, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, yinoyang 04/09/04 08/08/06
virus Murray Valley encephalitis virus May 09 2006 02:16PM 3063 14 217515 217528 antigenic, BlastProDom, coils, Gene3D, HMMPfam, HMMSmart, hmmtop, netnglyc, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, targetp, tmhmm, toppred, yinoyang 05/12/06 06/08/06
virus Newcastle disease virus Dec 07 2005 03:42PM 2592 6 168925 168930 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Nipah virus proteome Aug 31 2004 10:43AM 162 8 86269 86276 antigenic, BlastProDom, Coil, coils, HMMPfam, hmmtop, netnglyc, pepstats, predict_nls, predict_protein, ProfileScan, psort, Seg, signalp, superfamily, targetp, tmhmm, toppred, yinoyang 08/31/04 06/15/06
virus Norwalk virus Dec 07 2005 03:43PM 2593 9 168931 168939 antigenic, Coil, FPrintScan, Gene3D, HMMPfam, hmmtop, pepstats, ProfileScan, psort, Seg, superfamily, toppred, yinoyang 12/13/05 06/15/06
virus Omsk hemorrhagic fever virus Dec 07 2005 03:45PM 2594 14 168940 168953 antigenic, BlastProDom, Coil, Gene3D, HMMPfam, HMMSmart, hmmtop, pepstats, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus Orf virus proteome Aug 31 2004 10:42AM 161 130 86281 86410 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, netnglyc, netphos, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, targetp, tmhmm, toppred, virprot, yinoyang 08/31/04 08/08/06
virus Peste-des-petits-ruminants virus Dec 07 2005 04:41PM 2596 8 168957 168964 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, ProfileScan, psort, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Plum pox virus proteome Apr 09 2004 11:44AM 102 11 19340 19350 antigenic, coils, FPrintScan, HMMPfam, HMMSmart, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, predict_protein, ProfileScan, psort, swissprot, tmhmm, toppred, yinoyang 04/09/04 08/14/06
virus Poliovirus proteome Jan 27 2004 01:17PM 21 12 19328 19339 antigenic, BlastProDom, FPrintScan, HMMPfam, hmmtop, netnglyc, netphos, netpicorna, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, superfamily, swissprot, tmhmm, toppred, yinoyang 04/09/04 08/14/06
virus Porcine respiratory and reproductive syndrome virus Nov 01 2006 03:38PM 3182 20 226001 226020
virus Rabies virus Dec 08 2005 01:22PM 2603 5 172421 172425 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, ProfileScan, psort, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Rift Valley Fever vaccine ZH-548M12 segment l May 17 2004 11:15AM 141 1 85861 85861 antigenic, HMMPfam, hmmtop, netnglyc, netphos, pepstats, ProfileScan, psort, ScanRegExp, Seg, yinoyang 05/18/04 03/02/06
virus Rift Valley Fever vaccine ZH-548M12 segment m May 17 2004 11:40AM 142 1 85881 85881 antigenic, HMMPfam, hmmtop, netnglyc, netphos, pepstats, psort, Seg, signalp, swissprot, targetp, tmhmm, toppred, yinoyang 05/18/04 03/02/06
virus Rift Valley Fever vaccine ZH-548M12 segment s May 17 2004 11:53AM 143 2 85882 85883 antigenic, HMMPfam, hmmtop, netnglyc, netoglyc, netphos, pepstats, psort, Seg, toppred, yinoyang 05/18/04 03/02/06
virus Rinderpest virus Dec 08 2005 02:08PM 2604 7 172426 172432 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, ProfileScan, psort, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Rotavirus C segment 1 Dec 13 2005 12:00PM 2862 1 194441 194441 antigenic, coils, hmmtop, netnglyc, pepstats, predict_protein, psort, toppred, yinoyang 12/15/05 12/15/05
virus Rotavirus C segment 10 Dec 13 2005 01:46PM 2890 1 194469 194469 antigenic, coils, hmmtop, netnglyc, pepstats, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus Rotavirus C segment 11 Dec 13 2005 01:47PM 2891 1 194470 194470 antigenic, Coil, hmmtop, netnglyc, pepstats, predict_protein, psort, yinoyang 12/15/05 06/12/06
virus Rotavirus C segment 2 Dec 13 2005 01:25PM 2882 1 194461 194461 antigenic, coils, hmmtop, netnglyc, pepstats, predict_protein, psort, toppred, yinoyang 12/15/05 12/15/05
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus Rotavirus C segment 3 Dec 13 2005 01:26PM 2883 1 194462 194462 antigenic, coils, hmmtop, netnglyc, pepstats, predict_protein, psort, toppred, yinoyang 12/15/05 12/15/05
virus Rotavirus C segment 4 Dec 13 2005 01:27PM 2884 1 194463 194463 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus Rotavirus C segment 5 Dec 13 2005 01:28PM 2885 1 194464 194464 antigenic, BlastProDom, Gene3D, HMMPfam, hmmtop, netnglyc, pepstats, predict_protein, psort, superfamily, yinoyang 12/15/05 06/12/06
virus Rotavirus C segment 7 Dec 13 2005 01:42PM 2887 1 194466 194466 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus Rotavirus C segment 8 Dec 13 2005 01:43PM 2888 1 194467 194467 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, targetp, tmhmm, toppred, yinoyang 12/15/05 12/15/05
virus Rotavirus C segment 9 Dec 13 2005 01:45PM 2889 1 194468 194468 antigenic, hmmtop, netnglyc, pepstats, predict_protein, psort, yinoyang 12/15/05 12/15/05
virus Sabia virus segment l Dec 05 2005 10:53AM 2508 2 150798 150799 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, ProfileScan, psort, toppred, yinoyang 12/13/05 06/15/06
virus Sabia virus segment s Dec 05 2005 10:51AM 2507 2 150796 150797 antigenic, BlastProDom, HMMPfam, hmmtop, pepstats, psort, toppred, yinoyang 12/13/05 06/15/06
virus SARS coronavirus TOR2 curated proteome Apr 09 2004 11:30AM 94 30 19244 19275 antigenic, Coil, coils, HMMPfam, HMMSmart, hmmtop, netcorona, netnglyc, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, yinoyang 04/09/04 08/14/06
virus SARS coronavirus Urbani proteome Apr 09 2004 11:08AM 88 12 9221 9232 antigenic, Coil, HMMPfam, HMMSmart, hmmtop, netcorona, netnglyc, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, targetp, tmhmm, toppred, yinoyang 04/22/04 03/02/06
virus Sheeppox virus Dec 08 2005 02:21PM 2606 148 174130 174277 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, virprot, yinoyang 12/13/05 08/08/06
virus St. Louis encephalitis virus May 09 2006 02:17PM 3064 1 217529 217529 antigenic, BlastProDom, Gene3D, HMMPfam, HMMSmart, hmmtop, netnglyc, pepstats, predict_nls, ProfileScan, psort, tmhmm, yinoyang 05/12/06 06/08/06
virus Sudan ebolavirus Dec 05 2005 10:41AM 2504 8 150643 150650 antigenic, BlastProDom, FPrintScan, HMMPfam, hmmtop, pepstats, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06
virus Suid herpesvirus 1 (Pseudorabies virus) proteome Aug 15 2005 11:09AM 2342 88 123301 123388 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPanther, HMMPfam, HMMSmart, hmmtop, netnglyc, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, tmhmm, toppred, yinoyang 08/16/05 08/17/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus Swine vesicular disease virus Sep 21 2005 10:36AM 2423 1 123672 123672 antigenic, BlastProDom, FPrintScan, HMMPfam, HMMSmart, hmmtop, netnglyc, netpicorna, pepstats, ProfileScan, psort, superfamily, yinoyang 11/21/05 06/20/06
virus Swine vesicular disease virus Jul 17 2006 02:38PM 3142 12 221681 221692 antigenic, BlastProDom, FPrintScan, Gene3D, HMMPfam, HMMSmart, hmmtop, pepstats, ProfileScan, Seg, superfamily, targetp, tmhmm, toppred, yinoyang 07/24/06 08/14/06
virus Swine vesicular disease virus (STRAIN H/3 76) Jul 17 2006 11:13AM 3103 12 221413 221424 antigenic, BlastProDom, FPrintScan, Gene3D, HMMPfam, HMMSmart, hmmtop, pepstats, ProfileScan, Seg, superfamily, tmhmm, toppred, yinoyang 07/24/06 08/14/06
virus Usutu virus May 09 2006 02:18PM 3065 14 217530 217543 antigenic, BlastProDom, coils, Gene3D, HMMPfam, HMMSmart, hmmtop, netnglyc, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, targetp, tmhmm, toppred, yinoyang 05/12/06 06/08/06
virus Vaccinia virus Acambis 3000 Modified Virus Ankara Nov 08 2004 09:32AM 222 193 87401 87593 antigenic, BlastProDom, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, netnglyc, netphos, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, superfamily, swissprot, targetp, tmhmm, toppred, virprot, yinoyang 11/08/04 08/14/06
virus Vaccinia virus Copenhagen proteome Apr 09 2004 11:17AM 93 273 18761 19033 BlastProDom, Coil, FPrintScan, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, virprot, yinoyang 04/09/04 08/14/06
virus Vaccinia virus Western Reserve Nov 08 2004 09:33AM 223 218 87183 87400 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, netnglyc, netphos, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, virprot, yinoyang 11/08/04 08/22/06
virus Variola Bangladesh Proteome Feb 24 2004 02:25PM 41 189 81764 81952 antigenic, BlastProDom, Coil, coils, FPrintScan, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, virprot, yinoyang 02/18/04 08/11/06
virus Variola India-1967 virus proteome Feb 02 2004 04:37PM 26 197 19041 19237 antigenic, BlastProDom, Coil, FPrintScan, HMMPanther, HMMPfam, HMMPIR, HMMSmart, HMMTigr, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, swissprot, targetp, tmhmm, toppred, virprot, yinoyang 03/01/04 08/08/06
virus Venezuelan equine encephalitis virus proteome Apr 09 2004 11:43AM 101 12 19316 19327 antigenic, Coil, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMSmart, hmmtop, netnglyc, netoglyc, netphos, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, superfamily, swissprot, targetp, tmhmm, toppred, yinoyang 04/09/04 05/01/06
virus Vesicular exanthema of swine virus Sep 21 2005 10:39AM 2424 12 123673 123684 antigenic, FPrintScan, Gene3D, HMMPfam, HMMSmart, hmmtop, netnglyc, pepstats, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 11/21/05 06/15/06
virus Vesicular stomatitis Indiana virus proteome Apr 09 2004 11:42AM 100 6 19310 19315 antigenic, BlastProDom, Gene3D, HMMPfam, hmmtop, netnglyc, netoglyc, netphos, pepstats, ProfileScan, psort, Seg, signalp, targetp, tmhmm, toppred, yinoyang 05/07/04 05/01/06
virus West Nile virus May 09 2006 02:08PM 3062 14 217501 217514 antigenic, bimasmhc, BlastProDom, coils, Gene3D, HMMPfam, HMMSmart, hmmtop, netchop, netmhc, netnglyc, pepstats, predict_protein, ProfileScan, psort, ScanRegExp, Seg, signalp, superfamily, targetp, tmhmm, toppred, yinoyang 05/12/06 06/21/06
virus Western equine encephalomyelitis virus Dec 05 2005 05:13PM 2543 12 151053 151064 antigenic, FPrintScan, Gene3D, HMMPanther, HMMPfam, HMMSmart, hmmtop, pepstats, predict_nls, ProfileScan, psort, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 08/01/06
Category Reference proteome name Date Rp id Count scp Min scp id Max scp id Sequence Analysis Toolkit Begin analysis Last analysis
virus Yellow fever virus Dec 08 2005 03:47PM 2612 14 184885 184898 antigenic, BlastProDom, Gene3D, HMMPfam, HMMSmart, hmmtop, pepstats, predict_nls, ProfileScan, psort, ScanRegExp, Seg, superfamily, tmhmm, toppred, yinoyang 12/13/05 06/15/06

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