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Am J Hum Genet. 2003 December; 73(6): 1423–1430.
Published online 2003 November 6.
PMCID: PMC1180404
Dominant Intermediate Charcot-Marie-Tooth Type C Maps to Chromosome 1p34-p35
Albena Jordanova,1,3,* Florian P. Thomas,6,7,* Velina Guergueltcheva,4 Ivailo Tournev,4 Francisco A. A. Gondim,7 Borjana Ishpekova,4 Els De Vriendt,1 An Jacobs,1 Ivan Litvinenko,5 Neviana Ivanova,1,3 Borjan Buzhov,4 Peter De Jonghe,1,2 Ivo Kremensky,3 and Vincent Timmerman1
1Molecular Genetics Department, Flanders Interuniversity Institute for Biotechnology, and 2Division of Neurology, University Hospital of Antwerp, Antwerp; 3Laboratory of Molecular Pathology and Departments of 4Neurology and 5Pediatrics, Sofia Medical University, Sofia; 6Department of Molecular Microbiology and Immunology, Institute for Molecular Virology, St. Louis VA Medical Center, and 7Department of Neurology, Saint Louis University, St. Louis
Address for correspondence and reprints: Dr. Vincent Timmerman, Peripheral Neuropathy Group, Molecular Genetics Department (VIB8), University of Antwerp, Universiteitsplein 1, B-2610 Antwerp, Belgium. E-mail: vincent.timmerman/at/ua.ac.be
*These two authors contributed equally to this work.
Received June 12, 2003; Accepted September 10, 2003.
Abstract
Dominant intermediate Charcot-Marie-Tooth (DI-CMT) neuropathy is a genetic and phenotypic variant of classical CMT, characterized by intermediate nerve conduction velocities and histological evidence of both axonal and demyelinating features. We report two unrelated families with intermediate CMT linked to a novel locus on chromosome 1p34-p35 (DI-CMTC). The combined haplotype analysis in both families localized the DI-CMTC gene within a 6.3-cM linkage interval flanked by markers D1S2787 and D1S2830. The functional and positional candidate genes, Syndecan 3 (SDC3), and lysosomal-associated multispanning membrane protein 5 (LAPTM5) were excluded for pathogenic mutations.
 
Charcot-Marie-Tooth disease (CMT [MIM 118300]) is a clinically heterogeneous hereditary peripheral neuropathy characterized by progressive weakness and atrophy of the distal limb muscles, sensory abnormalities, and absent deep-tendon reflexes (Dyck et al. 1993). Most frequently, CMT is transmitted as a dominant trait. Since CMT affects ~1 in 2,500 individuals, it represents one of the most common inherited neuromuscular disorders (Skre 1974). On the basis of electrophysiological and histopathological criteria, CMT neuropathy is divided into two major clinical entities. CMT type 1 (CMT1), the demyelinating form, is characterized by median motor nerve–conduction velocities (NCVs) <38m/s. CMT type 2 (CMT2), the axonal form, is characterized by normal or slightly reduced motor NCVs (Harding and Thomas 1980). However, in some families with CMT, patients have median motor NCVs with a range of 25–45m/s and are therefore difficult to classify using traditional electrophysiological criteria. One proposal has been to designate this type of CMT “intermediate CMT” (Davis et al. 1978).

CMT shows extensive genetic heterogeneity. Disease-causing mutations have been reported in different genes with a wide range of biological functions (Inherited Peripheral Neuropathies Mutation Database). The majority of patients with CMT1 have a 1.5-Mb tandem duplication on chromosome 17p11.2-p12 (CMT1A [MIM 118220]) (Lupski et al. 1991; Raeymaekers et al. 1991) that harbors the peripheral myelin protein 22 gene (PMP22 [MIM 601097]) (Matsunami et al. 1992; Patel et al. 1992; Timmerman et al. 1992; Valentijn et al. 1992b). Furthermore, mutations in the following genes have been found to cause various types of dominant CMT1 and CMT2: PMP22 in CMT1A (Valentijn et al. 1992a), myelin protein zero (MPZ/P0 [MIM 159440]) in CMT1B (MIM 118200) (Hayasaka et al. 1993), lipopolysaccharide-induced tumor necrosis factor–α (LITAF/SIPMLE [MIM 603795]) in CMT1C (MIM 601098) (Street et al. 2003), early-growth-response element 2 (EGR2 [MIM 129010]) in CMT1D (MIM 607678) (Warner et al. 1998), connexin 32 (Cx32/GJB1 [MIM 304040]) in CMTX1 (MIM 302800) (Bergoffen et al. 1993), kinesin family member 1B (KIF1B [MIM 605995]) in CMT2A (MIM 118210) (Zhao et al. 2001), RAS-associated protein RAB7 (RAB7 [MIM 602298]) in CMT2B (MIM 600882) (Verhoeven et al. 2003), glycyl tRNA synthetase (GARS [MIM 600287]) (Antonellis et al. 2003) in CMT2D (MIM 601472) (Ionasescu et al. 1996), and neurofilament light chain (NF-L [MIM 162280]) in CMT2E (MIM 607684) (Mersiyanova et al. 2000). So far, the genes involved in CMT2C (MIM 606071) on 12q23-q24 (Klein et al. 2003) and CMT2F (MIM 606595) on 7q11-q21 (Ismailov et al. 2001) remain to be found.

Recently, linkage was reported in two families with intermediate CMT. The first locus for dominant intermediate CMT (DI-CMT) was mapped to 10q24.1-q25.1 (DI-CMTA [MIM 606483) in an Italian family (Verhoeven et al. 2001), and the second locus was mapped to 19p12-p13.2 (DI-CMTB [MIM 606482) in an Australian pedigree (Kennerson et al. 2001). To date, no gene for DI-CMT has been identified. Here, we report a novel locus for DI-CMTC, mapping to chromosome 1p34-p35 in two unrelated large pedigrees from Bulgaria and the United States.

The American family (CMT-160) contained affected members in four generations (fig. 1A). Its founders originated from northeast Germany and were of German and Polish origin. The age at onset in the 15 patients was mainly in the 1st and 2nd decades. The most common initial complaints were distal leg and arm weakness and numbness. Although motor symptoms predominated, sensory signs were also prominent. Men and women were similarly affected. The motor median NCVs had a range of 30–40 m/s. Sural nerve biopsies from three generations demonstrated clusters of regenerating fibers and age-dependent reduction in fiber density and myelin thickness but no onion bulbs.

Figure  1Figure 1
Haplotype analysis in pedigrees CMT-160 (A) and CMT-176 (B). Pedigree structures and sex of patients were disguised to preserve anonymity. For reasons of confidentiality, we did not reveal the genotypes of the asymptomatic individuals in the youngest (more ...)

The Bulgarian family (CMT-176) contained affected members with a motor and sensory neuropathy in seven generations (fig. 1B). In all 19 patients, motor symptoms and lower limb involvement predominated. Disease onset (weakness of the feet, gait disturbance, and foot deformities) varied with an age range of 7–59 years. The clinical features showed some gender differences, with a relatively milder involvement in women. Median motor NCVs had a range between 33 m/s and normal. We could trace the family history to 1850, when two affected siblings (II.1 and II.3) founded the two large branches of the pedigree. Some of the pedigree members (descendants from individual II.3) live in and around the town of Lom, about which a novel type of recessive inherited peripheral neuropathy was reported in Bulgarian Gypsies (HMSN-Lom [MIM 601455]) (Kalaydjieva et al. 1996). However, the members of family CMT-176 are of Bulgarian origin and have a genetically and clinically distinct CMT phenotype. The remaining part of the family lived in several towns in northwest Bulgaria.

For molecular genetic studies, genomic DNA of members of families CMT-160 and CMT-176 was extracted from peripheral blood samples by use of standard procedures. Informed consent was obtained, according to the Declaration of Helsinki and protocols approved by the institutional review boards of Sofia Medical University and St. Louis University. Initially, we excluded the CMT1A duplication/HNPP deletion and disease-causing mutations in genes that are implicated in the most common types of CMT; that is, PMP22, MPZ, Cx32, and EGR2. In addition, we excluded linkage to the CMT1A, CMT1B, CMT2D, CMT2E, DI-CMTA, and DI-CMTB loci by STR analysis (data not shown). Since simulation linkage studies with SLINK (Ott 1989; Weeks et al. 1990) indicated that families CMT-160 and CMT-176 had enough power to demonstrate significant linkage (Z>3.0 at θ=0.0), we performed a genomewide search using the 382 STR markers of the ABI Prism Linkage Mapping Set, v2.5 (Applied Biosystems), spaced at average intervals of 10 cM. In both families, we detected linkage with marker D1S255 on chromosome 1p35. Additional STR markers were selected from the ABI Prism linkage mapping set HD-5 and the Marshfield chromosome 1 sex-averaged linkage map (Marshfield Center for Medical Genetics) and were genotyped (fig. 2). Several markers gave significant positive two-point LOD scores (i.e., Z>3.0 at θ=0.0) in both pedigrees (table 1). The maximal cumulative LOD score (Zmax=12.20 at θ=0.0) was obtained at D1S233. The haplotypes were constructed with the STR alleles, according to the marker order reported by the Marshfield chromosome 1 sex-averaged linkage map and the NCBI Map Viewer (build 33). In family CMT-160, we found a disease-associated haplotype (227-200-100-115) with four STR markers: D1S233-D1S2830-D1S255-D1S2892 (fig. 1A). Individual CMT-160.II.9 inherited a recombinant chromosome between markers D1S2787 and D1S233, indicating that D1S2787 is the distal flanking marker. In family CMT-176, several recombination events were found that limit the disease-associated haplotype (111-279-163-221) to four markers: D1S2734-D1S234-D1S2787-D1S233. Patients CMT-176.V.16 and CMT-176.VI.5 transmitted a chromosome recombining between markers D1S233 and D1S2830 and therefore defining D1S2830 as the proximal flanking marker. The combined analysis of key recombinants in both families showed a minimal genetic region of 6.3 cM, flanked distally by D1S2787 and proximally by D1S2830 (fig. 2). The two families do not share a common disease-associated haplotype, which indicates that the mutations underlying DI-CMTC arose independently in the families.

Figure  2Figure 2
Sex-averaged linkage map of chromosome 1p34-p36 markers used in the present study. The genetic position of each marker (in cM) is obtained from the Marshfield chromosome 1 sex-averaged linkage map. Markers defining the DI-CMTC region are shown in boldface (more ...)
Table 1Table 1
Two-Point LOD Scores between the Dominant Intermediate CMT Type C Locus and STR Markers on Chromosome 1p34-p36[Note]

The DI-CMTC region on chromosome 1p34-p35 is covered by five sequenced NT contigs (NT_037485, NT_077385, NT_004538, NT_077923, and NT_004511) and contains >100 genes, according to build 33 of the NCBI MapViewer. As the positional and functional candidate gene, we first screened Syndecan 3 (SDC3 [GenBank accession number NM_014654]), which codes for a heparan sulfate proteoglycan and is expressed during early postnatal development in the nervous tissues (Carey 1996). The SDC3 coding region and its flanking intronic nucleotide sequences were sequenced on the genomic DNA level in four affected individuals from both families with DI-CMTC and in two normal control individuals, but no disease-associated mutations were detected (table A [online only]). However we found three coding SNPs (NCBI SNP cluster rs2491132, rs4949184, and rs1539360). Since several patients in both families were heterozygous for the SNP alleles, we do not expect genomic deletions in the SDC3 gene. In addition, sequencing of cDNA (SuperScript first strand synthesis system for RT-PCR [Invitrogen]), obtained from transformed lymphoblast cell lines of patient CMT-176.VI.3, revealed no alternative spliced variants (table A [online only]). Furthermore, we sequenced on the genomic DNA level the Lysosomal-associated multispanning membrane protein 5 (LAPTM5 [GenBank accession number NM_006762]) (Adra et al. 1996) gene—a positional candidate in the DI-CMT region (table A [online only]). We observed one coding SNP and one noncoding SNP in the gene (NCBI SNP cluster rs1050663 and rs3795438); however, we found no sequence variations that cosegregate with the phenotype in both families.

Table ATable A
Primer Pairs for Sequencing of Candidate Genes SDC3 and LAPTM5

The DI-CMTC locus is the second locus for CMT on the short arm of chromosome 1. It is interesting that the CMT2A locus maps on 1p35-p36 (Ben Othmane et al. 1993) and that a missense mutation in the KIF1B gene was found in a Japanese family with CMT2A (Zhao et al. 2001) (fig. 2). Two lines of evidence indicate that there are separate loci for DI-CMTC and CMT2A that do not overlap. First, CMT2A maps 26 cM distally to D1S2787, the flanking marker of the DI-CMTC locus. Second, CMT2A is flanked by D1S244 and D1S228 in sequence contigs NT_021937 and NT_004873, and the KIF1B gene is contained in NT_021937, thus not overlapping with the sequence contigs in the DI-CMTC region (Ben Othmane et al. 1993; Saito et al. 1997; NCBI Nucleotides Database [build 33]). Several pedigrees have been linked to the CMT2A locus (Ben Othmane et al. 1993; Pericak-Vance et al. 1997; Saito et al. 1997; Muglia et al. 2001). It is interesting that no disease-causing mutations in KIF1B have been reported in these families so far. On the basis of the linkage data available in the literature, we cannot exclude the possibility that at least some families with CMT2A without KIF1B mutations could map to the DI-CMTC locus. Furthermore, with regard to NCV measurements, families with CMT currently classified as having “CMT2” but with only a limited number of affected individuals could also be considered as having “intermediate CMT.”

It is interesting that several families with autosomal dominant CMT have been reported in which affected members have highly variable NCVs, ranging from normal to severely reduced. The electrophysiological phenotype thus overlaps the NCV ranges of CMT1 and CMT2. In some of these patients, specific mutations in MPZ (De Jonghe et al. 1999; Mastaglia et al. 1999) or NF-L (De Jonghe et al. 2001; Jordanova et al. 2003) were found. In addition, patients with CMTX1 with mutations in the GJB1/Cx32 gene display variable nerve conductions. Median NCVs in affected males are in the intermediate range of 30–40 m/s, whereas median NCVs are often >40 m/s in female carriers (references in Birouk et al. [1998]). Recently, a mixed demyelinating and axonal phenotype with variable NCVs has been observed in an autosomal recessive type of CMT (CMT4A [MIM 606598]) that is due to mutations in the ganglioside-induced differentiation-associated protein 1 (GDAP1 [MIM 214400]) (Baxter et al. 2002; Cuesta et al. 2002; Nelis et al. 2002; Boerkoel et al. 2003; Senderek et al. 2003).

In conclusion, we report a novel DI-CMT locus on 1p34-p35 in two unrelated pedigrees with patients having intermediate NCV. Mapping the DI-CMTC locus provides new evidence that intermediate CMT presents a genetically heterogeneous entity. Clinical and genetic analysis of additional families with CMT could better delineate the DI-CMT phenotype and will help to identify the disease-causing gene in DI-CMTC.

Acknowledgments

The authors are grateful to the patients and family members, for their cooperation in this study; to Professors Mitko Abadjiev and Veneta Georgieva, for pedigree data; and to the Bulgarian Association for Neuromuscular Disorders and Ethnic Minorities Health Problems Foundation, for assistance during patient visits. The authors also acknowledge the contribution of the VIB Genetic Service Facility for the fragment analyses. The research of the Bulgarian team was supported by Sofia Medical University grant 24/2001 and by National Science Fund of the Bulgarian Ministry of Education and Science grant L1206/2002. The American team was supported by Athena Diagnostics and the St. Louis chapter of the Neuropathy Association. The Belgian team was supported by the Fund for Scientific Research, the University of Antwerp, the Medical Foundation Queen Elisabeth, l'Association Belge contre les Maladies Neuro-Musculaires, and the Interuniversity Attraction Poles program P5/19 of the Belgian Federal Science Policy Office (POD). A.J. received visiting postdoctoral fellowships from POD and NATO/FWO.

Electronic-Database Information

URLs for data presented herein are as follows:

Inherited Peripheral Neuropathies Mutation Database, http://molgen-www.uia.ac.be/CMTMutations/ (for genes and mutations in CMT).
Marshfield Center for Medical Genetics, http://www.marshfieldclinic.org/research/genetics/ (for Marshfield Map location of markers).
NCBI Map Viewer, http://www.ncbi.nlm.nih.gov/mapview/ (for finding known genes, ESTs, and putative novel genes in the DI-CMTC region).
NCBI Nucleotides Database, http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Nucleotide(for NT contig numbers).
NCBI SNP Database, http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?CMD=Search=snp/ (for searching for SNPs).
Online Mendelian Inheritance in Man (OMIM), http://www.ncbi.nlm.nih.gov/Omim/ (for CMT, CMT1A, PMP22, MPZ/P0, CMT1B, LITAF/SIPMLE, CMT1C, EGR2, CMT1D, Cx32/GJB1, CMTX1, KIF1B, CMT2A, RAB7, CMT2B, GARS, CMT2D, NF-L, CMT2E, CMT2C, CMT2F, DI-CMTA, DI-CMTB, HMSN-Lom, CMT4A, and GDAP1).
VIB Genetic Service Facility, http://www.vibgeneticservicefacility.be/.
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