LOCUS ORAHBBPSE 6973 bp ds-DNA PRI 15-JUN-1989 DEFINITION Orangutan (P.pygmaeus) beta- and eta-globin pseudogenes and Alu repeat. ACCESSION M18038 KEYWORDS Alu repeat; globin; hemoglobin; pseudogene. SOURCE Orangutan (P.pygmaeus) DNA, clone. ORGANISM Pongo pygmaeus Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Pongidae. REFERENCE 1 (bases 1593 to 3704) AUTHORS Koop,B.F., Goodman,M., Xu,P., Chan,K. and Slightom,J.L. TITLE Primate eta-globin DNA sequences and man's place among the great apes JOURNAL Nature 319, 234-238 (1986) STANDARD full automatic REFERENCE 2 (bases 1 to 6973) AUTHORS Miyamoto,M.M., Slightom,J.L. and Goodman,M. TITLE Phylogenetic relations of humans and African apes from DNA sequences in the pseudo-eta-globin region JOURNAL Science 238, 369-373 (1987) STANDARD full automatic COMMENT [2] revises [1]. Computer-readable sequence for [2] kindly provided by M.M.Miyamoto, 6-FEB-1988. FEATURES Location/Qualifiers repeat_region 1047..1385 /note="Alu repeat" mRNA 1916..3608 /note="pseudo-beta-globim mRNA" BASE COUNT 2165 a 1287 c 1443 g 2078 t ORIGIN 1 bp upstream of EcoRI site. 1 gaattcctag ttggctgacg gaaagatggg gcagctgttc actggtacgc agggttttag 61 atgtatgtac ctaaggatat gaggtatggc aatgaacaga agttcttttg ggaatgagtt 121 ttagggccat taaaggacat gacctgaagt ttcctctcag gccagtcccc acaacttaat 181 ataaatatgt ttcctgcata tagtcaaagt tgccacttct ttttcttcat atcatcgatc 241 tttactctta aagataatct tggttttgcc tcaaactctg tttgtcacta caaactttcc 301 ccatgttcct aagtaaaaca gataactgcc tctcaactat atcaagtaga ctaaaatatt 361 gtgtctctaa tatcagaaat gcagctttaa tatattgggt ttaactcttt gaaatttaga 421 gtctccttga aatatacatg ggggtgattt cctaaacttt atttcttgta aggatttatc 481 tcaggggtag cacacaaacc agcatcctga acctctaagt atgaggacaa taagccttaa 541 gaatataaaa taaactgtga ttctctctgc cggtggaagt gtgccctgtc tattcctgaa 601 attgcttgtt tgagatgcat gagatgtgca gcacatgaga cacgtgcagc agcctgtgga 661 atattgtcag tgaagaatgt ctctgcctga ttagatataa agacaagttt aacacagcat 721 tagactgtag atcaagcccg tgccagacac aaatgaccta atgcccagca cgggccatgg 781 aatcttctat cctcttgctt gaacagagca gcacacttct cccccaacac tattagatgt 841 tctcgcataa ttttgtagat atgtaggatt tgacatggac tgttgttcag tgattcagag 901 gaaatctcct ttgttcagat aagtacactg actactaaat ggattaaaaa actcggtaat 961 aaaacccagt tttcccctta cttccctagt ttgttcttat tctgctttct tccaaattga 1021 tgctggatag aggtgtttat ttctattcta aaaagtgatg aaattggctg gtcgtggtgg 1081 ctcacacctg taatcccagc actttaggag gctgaggtgg gcggatcccg aggtcaggag 1141 atcaagacca tcctggctaa catggtgaaa ccccgtctct actaaaaata caaaaaatta 1201 gccagacatg gtggtgggca cctgtagtcc cagctactcg ggaggctgag gcgggagaat 1261 ggcgtgaacc cgggaggcag agctttcagt gagcggagat cgcgccactg cactccagcc 1321 tgggtgacaa agcaggactc catctcaaaa ataaaaatta aagaaaaaaa agtgatgaag 1381 ttgtgtactc aatgtagtct caagagaatt gaaaaccaag aaaggctatg gcttcttcca 1441 cataaagcct ggatgaataa caggataaca cgttgttaca ttgtcacaac tcctgatcca 1501 ggaattgatt gctaagatat tcataattct tatccttttc agttgtaact tattcctatt 1561 tgtcagcatt caggttatta gcggccgctg gcggactcct tgagaaataa actgcacact 1621 ggatggtggg agtagtgtag gaaaatggag cggaaggaag taaagtttca aattaagcct 1681 gaacagcaaa gttcccctga gaaggccacc cggattctat cagaaactcg aatgtccatc 1741 ttgcaaaact tccttgccca aaccccaccc ctggagtcac aacccaccct tgaccaatag 1801 attcatttca ctgggaaagg caaagcgttg gtcaacagat tcatttcact gggagaggca 1861 aagggctggg ggccagagag gagaaatgaa aagccacaca tgaagcagca gtgcaggcat 1921 gcttctggct catctgtgat caccgggaaa atcccagatc tgacactgta gtgcatttca 1981 ctgctgacaa gaaggctgct gccaatagcc tgtgaagcaa ggttaaggtg agaaggctgg 2041 aggtgagact ctgggcaggt aggtaccgga agccggggca aggtgcagaa aggcagaaag 2101 tgtttctgaa agagggatta gcccgttgtc ttacatagtc tgactttgca cctgctctgt 2161 gattattact atcacacagt ctcctggttg tctacccatg gacccagagg cagtttgaaa 2221 gttttggcta tctgggttct gactgtgcaa taatgggcaa ccctaaagtc aaggcacatg 2281 gcaagaaggt gctgatcttc ggaaaagctg ttatgctcat ggatgacctc aaaggcacct 2341 ttgctacact gagtgacctg cactgtaaca agctgcacgt ggaccctgag aacttcctgg 2401 tgagtgctaa gtacactcac gctttcttct ttacccttag atatttgcac tatgggtact 2461 tttgaaagca gaggtggctt tctcttgtgt tatgagtcag ctatgggata tgatatttca 2521 gcagtgggat tttgagagtt atgttgttgt aaataacata actaaaattt ggtggagcaa 2581 ggactatgaa taatggaggg ccacttacca tttgatagct ctgaaaaacc atcttgtaaa 2641 aaattctggc caaaatcgga ctgagtgttt ttggatgagg gaacagaagt tgagatagag 2701 aaaataacat ctttcctttg gtcagtgaaa ttttctatga aaattaatag acacttttct 2761 gcatagtcct ggaggttaga aaaagatcaa ctgaacagag tagtgggaaa ctgttaaaaa 2821 gaggattgtt tccctctgaa tgatgatggt atacttttgt acgcatggta caggattctt 2881 tgttatgagt gtttgggaaa attgtatgtg tgtgatgact ggggacttat cctatccatt 2941 actgttcctt gaagtactat tatcctactt tttaaaagga cggagtctct aaaaaagtga 3001 aacaattaat cacaatatgc tggggtagtg agttggcata gcaagtaaga gaaggatagg 3061 acacaatggg aggtgcaggg ctgccagtca tattgaagct catgtctagc ccataatggt 3121 gagagttgct caaactctgg tcaaaaagga tgtaagtgtt gtatctattt actgcaagtc 3181 cagcttgagg ccttctattc actatgtacc attttctttt tatcttcact ccctccccag 3241 ctcttaggca acgtgatatt gattgttttg gcaacccact tcagcgagga gtttacccta 3301 cagatacagg cttcttggca ggaactaaca aatgctgtgg ttaatgctgt agcccacaag 3361 gaccactgag ttccccgtcc actatgtttg tacctatgtc ccaaaatctc atctccttta 3421 gatgggggag gttggggaga agagcagtat cctgcctgct gatttagtta ctgcatgata 3481 aaaataaaat aaagaaatat gctaagaaat atcattgtat tctttttctg tctttatatt 3541 ttaccctgat tcagccaaaa ggacacacca tttctgatgg aaatgagaat gttggagaat 3601 gggagtttaa ggacagagaa gatactttct tgcaatcctg caagaaaaga gagaacttgt 3661 gggtggcttt agtggggtag ttactcctag gaaggcaaaa tcgtctctag aataagacaa 3721 tgtctttaca gaaagggagg gcaatggagg tactctttgg agatgtaaga ggattgttgg 3781 tggtgtgtag aggtatgtta ggactcaaat tagaagttct gtataggcta ttatttgtat 3841 gaactcagga tatagctcat ttggtgactg tagttcactt ctacttattt taaacaacat 3901 atttttatga tttataatga agtggagatg gggcttccta gagaccaatc aagggccaaa 3961 ccttgaactt tctcttaacg ttttcaatgg tattaataga gaattatctc taaggcatgt 4021 gaactggctg tcttggtttt catctgcact taatctgcta cctctgtgac ctgaaacata 4081 tttataattc cattaagctg tacatatgat agatttatca tatttatttt ccttaaagga 4141 tttttgtaag aactaattga attgatacct gtaaagactt tatcacacta cctgataaat 4201 aataaatctc tttgttcagc tctgtttcta taaatataca cgttttattg tttttagtgg 4261 tagtgatttt attctctttc tatatatata atatgtgtgc attcataaat atatacaatt 4321 tttatgaata aaaattatta gcaatcaata ttgaaaacaa ctgattttgt ttatgtgagt 4381 aaacagcaga ttaaaaggct gagatttagg catcagcatg ttaggtcaag ttgatagagg 4441 agaatatgga catttaaaag aggcaggatg atataaaatt agggaaactg gatgcagaga 4501 ccagatgaag taagaaaaat agctattgtt ttgagcaaaa atcactgaag tttcttgcat 4561 ataagagtga cataataaat agggaaatgt agaaaattga ttcacatgtg tatatatata 4621 tatatagaga gagagagaac tgattagaca aagtctaact tgggtatagt cagaggagct 4681 tgctgtaatt atattgaggt gatggataaa gaactgaagt tgatggaaac aatgaagtta 4741 agaaaaaaaa tcgagtaaga gaccattgtg gcagtgattg cacagaactg gaaaacattg 4801 tgaaacagag agtcagagat gacagctaaa atccctgcct gtgaatgaaa agaaggaaat 4861 ttattgacag aacagcaaat gcctacaagc cccctgtttg gatctggcaa tgaacgtagc 4921 cattctatgg aaatcgcttc aaactcctgt acccaagaca cttaggaagt atgtagcacc 4981 ctcaaactga ctcaagaaag aggttttagg agatataata tcctttcttc tccagtttca 5041 ctaatcccaa aacctctttc tcaaagtatt tcctctatgt gtccacccca aagagctcac 5101 ctcaccatat ctcttgagtg ggagcacata gataagcggt gctaccatct aacagcttct 5161 gaaattcctt tgtcatattt ttgagtcccc actaataacc cacaaagcag aataaataac 5221 agttgctcat gtacaataat cactcaactg ctgtcttgta gcatacatta attaagcaca 5281 ttctttgaat aattactgtg tccaacaatc acactttaaa atctcacact tgtgctatcc 5341 cttgcccttc tgaatgtcac tctgtatttt aaattaagag acgagggttg aatttcctgt 5401 gttacttatc attcatttct tgatgagcag ttttcacact cacctttact ggaaaacaca 5461 taagtacaca tcttacagga aaaatatacc aaactgacat gtagcatgaa tgcttgtgca 5521 tgtagtcata taaaatcttg tagcaatgta aacattctct gatatacaca tacagatgtg 5581 tgtatatgtc tacacaattt cttatgctcc atgaacaaac attccatgca cacataagaa 5641 cacacagcgt tacagatgca tacttgagtg cattgacaaa attaccccag tcaatctaga 5701 gaatttggat ttctgcattt gactctgtta gctgtgtgca tgctgttcat ttactctggg 5761 tgacgtcttt ccctcatttt gccctgtcta tcttgtacgc atactttaag tcctaactta 5821 aatgtcatct caactaagaa gctttttttt ttattttaac tgggcttaaa gccctgtcta 5881 taaactctgc tacaattatg ggctctttct tataatattt agtgtttttc ctactaatgt 5941 acttaatctg ctcattgtat attcccacca ctaaatttta acctctctta tggtagagac 6001 attgtcttgt aaactgttat ttccatagta tttggagatg aaaaaaagat taaattatcc 6061 aaaattagat ctctcttttc tacattatga gtattacact atccatagag aagtttgttt 6121 gggacctaaa ctgaggaacc tttggttcta aaatgattat gtgatatctt agtatgtata 6181 ggtcatgagg ttccttcctc tgcctctaca aggctgttcc ctcaatctcc cttgctatag 6241 tttgattagt caacaagtat gtgtcatgca tttattcaca tcagaatttc atacactaat 6301 aatagtatca gaagtcagtt tattagtttt atcagttagg gtccatcaag gaaaggacaa 6361 accattatca gttactcaac ctagaattaa atacagctct taatagttaa ttatcctcat 6421 attggaagag ctaaaatatc aaataaagga cagtgcagaa atctagatgt tagtaacatc 6481 agaaaacctc ttccaccatt aggcctagaa gggcagaagg agaaaatgtt tataccacca 6541 gagtccagaa ccagagccca taaccagagg tctactggat tcagtgagct attgggggct 6601 ccttggagag agccagaact gtctaatggg agcatcaaaa tatcagccat aaaaaaacca 6661 taaaaaagac tctctgctgt gggagatccc ttcagagaga gagagaccag aaataatctt 6721 gcttattatg ctttccctca gccagtgttt accattgcag aatgtacatg cgactgaaag 6781 ggtgaggaaa cctgggaaat gtcagttcct caaatacaga gaacactgag ggaaggatga 6841 gaaataaatt tgaaaccaga atggtaattg acagaaggaa actaggatgt gtccagtaaa 6901 taaataatta cagtgtgcag tgattactgc aatgattaat gtattgataa gataatatga 6961 aaacacagaa ttc //