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UniSTS:60216 Links
D9S15
Homo sapiens chromosome 9, locus PTAR1, polymorphic
Pan troglodytes chromosome 9, locus PTAR1

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:TAAAGATTGGGAGTCAAGTA
Reverse primer:TTCACTTGATGGTGGTAATC
PCR product size:132-197 (bp), Homo sapiens

   Homo sapiens
Name: D9S15
Also known as: GDB:176285 SHGC-6959
Polymorphism info: on genetic map

Cross References Help
Gene GeneID:375743
 Symbol:PTAR1
 Description:protein prenyltransferase alpha subunit repeat containing 1
 Position:9q21.11
UniGeneHs.663503 Transcribed locus

Mapping InformationHelp
D9S15 Sequence Map: Chr 9|HuRef Map Viewer
  Position: 42181045-42181242 (bp)
 
D9S15 Sequence Map: Chr 9|Celera Map Viewer
  Position: 42932226-42932423 (bp)
 
D9S15 Sequence Map: Chr 9 Map Viewer
  Position: 71531672-71531871 (bp)
 
D9S15 deCODE Map: Chr 9 Map Viewer
  Position: 66.45 (cM)
 
D9S15 Marshfield Map: Chr 9 Map Viewer
  Position: 67.93 (cM)
 
SHGC-6959 Stanford-G3 Map: Chr 9 Map Viewer
  Position: 1973 (cR10000)
  Lod score: F
  Reference Interval: 14
 
D9S15 Whitehead-YAC Map: Chr 9 Map Viewer
  Reference Interval: WC9.1

Electronic PCR results Help
Genomic (5 of 7)[Show All Hits]
AL162412.11 84106 .. 84305 (200 bp)  
CH003456.1 40416764 .. 40416961 (198 bp)  
CH003504.1 45472263 .. 45472460 (198 bp)  
CH471089.1 1312262 .. 1312459 (198 bp)  
CM000260.1 42932226 .. 42932423 (198 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AC008248.3 120751 .. 120950 (200 bp)  
 
ESTs (3)
AA535190.1 88 .. 289 (202 bp)  
BI492580.1 18 .. 217 (200 bp)  
CA440515.1 18 .. 199 (182 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01099772.1 5122 .. 5319 (198 bp)  
AADC01083379.1 198626 .. 198823 (198 bp)  
AADB02012598.1 246165 .. 246362 (198 bp)  
ABBA01033812.1 54134 .. 54331 (198 bp)  
 

   Pan troglodytes
Name: D9S15
Polymorphism info:  

Cross References Help
Gene GeneID:472948
 Symbol:PTAR1
 Description:protein prenyltransferase alpha subunit repeat containing 1
 Position: 

Mapping InformationHelp
D9S15 Sequence Map: Chr 9 Map Viewer
  Position: 68488117-68488307 (bp)

Electronic PCR results Help
Genomic (1)
CM000323.1 68488117 .. 68488307 (191 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01068109.1 26800 .. 26990 (191 bp)  
AACZ02104140.1 18579 .. 18769 (191 bp)  
 

 

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