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Cancer Genome Anatomy Project |
| NCI > CGAP > GAI > SNP Maps > Chr 5 > SNPs Localized to Interval 16 |
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D5S436 - D5S673 142.3 cM - 149.0 cM / 547.76 cR - 587.00 cR |
| UniGene | Gene Symbol | Description | SNP IDs | SNP Summary | CGAP Gene Info |
| Confirmed SNPs | |||||
| Hs.543850 | TNIP1 | TNFAIP3 interacting protein 1 | CGAP-C-2243 |
SNPs | Gene Info |
| Validated SNPs | |||||
| Hs.432674 | LARS | Leucyl-tRNA synthetase | CGAP-C-56668 |
SNPs | Gene Info |
| Hs.443728 | SH3RF2 | SH3 domain containing ring finger 2 | CGAP-C-257923 |
SNPs | Gene Info |
| Hs.61441 | RBM27 | RNA binding motif protein 27 | CGAP-C-606167 |
SNPs | Gene Info |
| Hs.331555 | SPINK5 | Serine peptidase inhibitor, Kazal type 5 | CGAP-C-265012 |
SNPs | Gene Info |
| Hs.483772 | FBXO38 | F-box protein 38 | CGAP-C-630489 |
SNPs | Gene Info |
| Hs.302738 | SLC26A2 | Solute carrier family 26 (sulfate transporter), member 2 | CGAP-C-51140 |
SNPs | Gene Info |
| Hs.586219 | KIAA0194 | KIAA0194 protein | CGAP-C-619938 |
SNPs | Gene Info |
| Hs.595177 | - | CDNA FLJ36989 fis, clone BRACE2006753 | CGAP-C-628042 |
SNPs | Gene Info |
| Hs.412117 | ANXA6 | Annexin A6 | CGAP-C-610819 |
SNPs | Gene Info |
| Hs.222055 | NDST1 | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 | CGAP-C-58477 |
SNPs | Gene Info |
| Hs.269004 | SLC36A1 | Solute carrier family 36 (proton/amino acid symporter), member 1 | CGAP-C-56757 CGAP-C-62179 |
SNPs | Gene Info |
| Hs.587054 | G3BP1 | GTPase activating protein (SH3 domain) binding protein 1 | CGAP-C-270028 |
SNPs | Gene Info |
| Hs.3353 | - | CDNA FLJ46457 fis, clone THYMU3020856 | CGAP-C-255947 |
SNPs | Gene Info |
| Hs.111779 | SPARC | Secreted protein, acidic, cysteine-rich (osteonectin) | CGAP-C-266134 CGAP-C-266136 |
SNPs | Gene Info |
| Hs.483924 | MRPL22 | Mitochondrial ribosomal protein L22 | CGAP-C-50935 |
SNPs | Gene Info |
| Hs.292078 | LARP1 | La ribonucleoprotein domain family, member 1 | CGAP-C-271985 |
SNPs | Gene Info |
| Hs.26703 | CNOT8 | CCR4-NOT transcription complex, subunit 8 | CGAP-C-59009 |
SNPs | Gene Info |
| Hs.166551 | FAM114A2 | Family with sequence similarity 114, member A2 | CGAP-C-235990 CGAP-C-235991 CGAP-C-255202 |
SNPs | Gene Info |
| Predicted SNPs | |||||
| Hs.432674 | LARS | Leucyl-tRNA synthetase | CGAP-C-2434579 CGAP-C-2434581 |
SNPs | Gene Info |
| Hs.443728 | SH3RF2 | SH3 domain containing ring finger 2 | CGAP-C-2408987 |
SNPs | Gene Info |
| Hs.655213 | PPP2R2B | Protein phosphatase 2 (formerly 2A), regulatory subunit B, beta isoform | CGAP-C-2439535 |
SNPs | Gene Info |
| Hs.443465 | TCERG1 | Transcription elongation regulator 1 | CGAP-C-2438346 CGAP-C-2438348 CGAP-C-2438349 |
SNPs | Gene Info |
| Hs.61441 | RBM27 | RNA binding motif protein 27 | CGAP-C-2392155 |
SNPs | Gene Info |
| Hs.483772 | FBXO38 | F-box protein 38 | CGAP-C-2406311 |
SNPs | Gene Info |
| Hs.511816 | GRPEL2 | GrpE-like 2, mitochondrial (E. coli) | CGAP-C-2445756 |
SNPs | Gene Info |
| Hs.483784 | SH3TC2 | SH3 domain and tetratricopeptide repeats 2 | CGAP-C-2399000 |
SNPs | Gene Info |
| Hs.712555 | CSNK1A1 | Casein kinase 1, alpha 1 | CGAP-C-2403609 CGAP-C-2403614 CGAP-C-2403616 |
SNPs | Gene Info |
| Hs.591251 | ADRB2 | Adrenergic, beta-2-, receptor, surface | CGAP-C-2403381 CGAP-C-2403382 |
SNPs | Gene Info |
| Hs.143535 | CAMK2A | Calcium/calmodulin-dependent protein kinase (CaM kinase) II alpha | CGAP-C-2431748 CGAP-C-2431751 |
SNPs | Gene Info |
| Hs.654394 | CSF1R | Colony stimulating factor 1 receptor | CGAP-C-2397242 CGAP-C-2397247 |
SNPs | Gene Info |
| Hs.509067 | PDGFRB | Platelet-derived growth factor receptor, beta polypeptide | CGAP-C-2422888 |
SNPs | Gene Info |
| Hs.595177 | - | CDNA FLJ36989 fis, clone BRACE2006753 | CGAP-C-2433042 |
SNPs | Gene Info |
| Hs.714701 | RPS14 | Ribosomal protein S14 | CGAP-C-2425355 CGAP-C-2425364 CGAP-C-2425368 CGAP-C-2425369 CGAP-C-2425370 |
SNPs | Gene Info |
| Hs.675564 | DCTN4 | Dynactin 4 (p62) | CGAP-C-2438796 CGAP-C-2438798 |
SNPs | Gene Info |
| Hs.386793 | - | Transcribed locus, moderately similar to NP_002075.2 glutathione peroxidase 3 precursor [Homo sapiens] | CGAP-C-2488011 |
SNPs | Gene Info |
| Hs.715551 | GPX3 | Glutathione peroxidase 3 (plasma) | CGAP-C-2488012 |
SNPs | Gene Info |
| Hs.412117 | ANXA6 | Annexin A6 | CGAP-C-2485085 CGAP-C-2485093 CGAP-C-2485094 |
SNPs | Gene Info |
| Hs.222055 | NDST1 | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 | CGAP-C-2454788 |
SNPs | Gene Info |
| Hs.543850 | TNIP1 | TNFAIP3 interacting protein 1 | CGAP-C-2392267 CGAP-C-2392277 CGAP-C-2392279 CGAP-C-2392280 |
SNPs | Gene Info |
| Hs.435228 | SYNPO | Synaptopodin | CGAP-C-2409525 |
SNPs | Gene Info |
| Hs.483873 | GM2A | GM2 ganglioside activator | CGAP-C-2433045 CGAP-C-2433046 CGAP-C-2433047 |
SNPs | Gene Info |
| Hs.436568 | CD74 | CD74 molecule, major histocompatibility complex, class II invariant chain | CGAP-C-2478580 CGAP-C-2478583 CGAP-C-2478584 CGAP-C-2478586 CGAP-C-2478587 CGAP-C-2478588 CGAP-C-2478589 CGAP-C-2478590 CGAP-C-2478591 CGAP-C-2478592 CGAP-C-2478601 |
SNPs | Gene Info |
| Hs.714487 | - | Transcribed locus, moderately similar to NP_001020329.1 CD74 antigen isoform c [Homo sapiens] | CGAP-C-2478551 CGAP-C-2478553 CGAP-C-2478554 CGAP-C-2478555 CGAP-C-2478557 CGAP-C-2478562 CGAP-C-2478563 CGAP-C-2478568 |
SNPs | Gene Info |
| Hs.91626 | MYOZ3 | Myozenin 3 | CGAP-C-2424755 |
SNPs | Gene Info |
| Hs.269004 | SLC36A1 | Solute carrier family 36 (proton/amino acid symporter), member 1 | CGAP-C-2388510 CGAP-C-2388513 |
SNPs | Gene Info |
| Hs.713564 | RBM22 | RNA binding motif protein 22 | CGAP-C-2453829 CGAP-C-2453830 |
SNPs | Gene Info |
| Hs.587054 | G3BP1 | GTPase activating protein (SH3 domain) binding protein 1 | CGAP-C-2436957 |
SNPs | Gene Info |
| Hs.111779 | SPARC | Secreted protein, acidic, cysteine-rich (osteonectin) | CGAP-C-2417825 CGAP-C-2485630 CGAP-C-2485631 CGAP-C-2485632 CGAP-C-2485639 CGAP-C-2485640 CGAP-C-2485667 CGAP-C-2485668 CGAP-C-2485675 CGAP-C-2485683 CGAP-C-2485687 CGAP-C-2485692 CGAP-C-2485696 |
SNPs | Gene Info |
| Hs.125213 | ATOX1 | ATX1 antioxidant protein 1 homolog (yeast) | CGAP-C-2421854 |
SNPs | Gene Info |
| Hs.483924 | MRPL22 | Mitochondrial ribosomal protein L22 | CGAP-C-2431020 CGAP-C-2431021 CGAP-C-2431022 |
SNPs | Gene Info |
| Hs.432818 | MFAP3 | Microfibrillar-associated protein 3 | CGAP-C-2489815 CGAP-C-2489816 |
SNPs | Gene Info |
| Hs.292078 | LARP1 | La ribonucleoprotein domain family, member 1 | CGAP-C-2455997 CGAP-C-2455998 CGAP-C-2455999 |
SNPs | Gene Info |
| Hs.483921 | GEMIN5 | Gem (nuclear organelle) associated protein 5 | CGAP-C-2391556 |
SNPs | Gene Info |
| Hs.26703 | CNOT8 | CCR4-NOT transcription complex, subunit 8 | CGAP-C-2413918 |
SNPs | Gene Info |
| Hs.166551 | FAM114A2 | Family with sequence similarity 114, member A2 | CGAP-C-2403404 CGAP-C-2403407 CGAP-C-2403408 |
SNPs | Gene Info |
| Hs.519694 | C5orf4 | Chromosome 5 open reading frame 4 | CGAP-C-2435928 |
SNPs | Gene Info |
| Hs.519693 | GRIA1 | Glutamate receptor, ionotropic, AMPA 1 | CGAP-C-2487500 |
SNPs | Gene Info |
| Comments, questions and suggestions to: Bob Clifford ( clifforr@mail.nih.gov ) |