BLASTP 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= YPR041W TIF5, Chr XVI from 648699-649916
         (405 letters)

Database: nr
           361,503 sequences; 110,384,460 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|585304|sp|P38431|IF5_YEAST EUKARYOTIC TRANSLATION INITIATION...   765  0.0
gi|1170512|sp|Q09689|IF5_SCHPO PROBABLE EUKARYOTIC TRANSLATION ...   328  5e-89
gi|585303|sp|Q07205|IF5_RAT EUKARYOTIC TRANSLATION INITIATION F...   256  2e-67
gi|1708419|sp|P55010|IF5_HUMAN EUKARYOTIC TRANSLATION INITIATIO...   252  4e-66
gi|2494319|sp|Q22918|IF5_CAEEL EUKARYOTIC TRANSLATION INITIATIO...   216  2e-55
gi|1352439|sp|P48724|IF5_PHAVU EUKARYOTIC TRANSLATION INITIATIO...   177  1e-43
gi|4160402|emb|CAA10616| (AJ132240) eukaryotic translation init...   173  2e-42
gi|2494320|sp|P55876|IF5_MAIZE EUKARYOTIC TRANSLATION INITIATIO...   171  6e-42
gi|2494318|sp|Q26891|IF5_TRICA EUKARYOTIC TRANSLATION INITIATIO...   102  4e-21
gi|3024016|sp|P56329|IF2B_SCHPO PROBABLE EUKARYOTIC TRANSLATION...    62  5e-09
gi|3122238|sp|O27958|IF2B_ARCFU PUTATIVE TRANSLATION INITIATION...    62  7e-09
gi|3122237|sp|O27797|IF2B_METTH PUTATIVE TRANSLATION INITIATION...    62  9e-09
gi|3257011|gnl|PID|d1030637 (AP000003) 140aa long hypothetical ...    61  1e-08
gi|124205|sp|P09064|IF2B_YEAST EUKARYOTIC TRANSLATION INITIATIO...    58  1e-07
gi|1170497|sp|P41375|IF2B_DROME EUKARYOTIC TRANSLATION INITIATI...    56  4e-07
gi|3024028|sp|Q41969|IF2B_ARATH EUKARYOTIC TRANSLATION INITIATI...    56  5e-07
gi|3122234|sp|O24473|IF2B_WHEAT EUKARYOTIC TRANSLATION INITIATI...    55  6e-07
gi|2495796|sp|Q57562|IF2B_METJA PUTATIVE TRANSLATION INITIATION...    54  2e-06
gi|3024027|sp|Q21230|IF2B_CAEEL PUTATIVE EUKARYOTIC TRANSLATION...    53  4e-06
gi|3875263|emb|CAA99824| (Z75533) similar to translational init...    53  4e-06
gi|2494299|sp|P55871|IF2B_MALDO EUKARYOTIC TRANSLATION INITIATI...    51  2e-05
gi|729815|sp|P41035|IF2B_RABIT EUKARYOTIC TRANSLATION INITIATIO...    50  3e-05
gi|632273|pir||JC2329 translation initiation factor eIF-2 beta ...    50  3e-05
gi|124204|sp|P20042|IF2B_HUMAN EUKARYOTIC TRANSLATION INITIATIO...    49  6e-05

>gi|585304|sp|P38431|IF5_YEAST EUKARYOTIC TRANSLATION INITIATION
           FACTOR 5 (EIF-5) >gi|422200|pir||A46699 translation
           initiation factor eIF-5 - yeast (Saccharomyces
           cerevisiae) >gi|1072407|emb|CAA92145| (Z68111) Tif5p
           [Saccharomyces cerevisiae] >gi|1314113|emb|CAA94989|
           (Z71255) Tif5p [Saccharomyces cerevisiae]
           >gi|1370298|emb|CAA97991| (Z73616) eukaryotic
           translation initiation factor 5 [Saccharomyces
           cerevisiae]
           Length = 405
           
 Score =  765 bits (1953), Expect = 0.0
 Identities = 376/392 (95%), Positives = 376/392 (95%)

Query: 1   MSINICRDNHDPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFE 60
           MSINICRDNHDPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFE
Sbjct: 1   MSINICRDNHDPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFE 60

Query: 61  LGAQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRD 120
           LGAQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRD
Sbjct: 61  LGAQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRD 120

Query: 121 CKACGKRTPMDLRHKLSSFILKNPPDXXXXXXXXXXXXXXXXNVRGGGLSISDIAQGKSQ 180
           CKACGKRTPMDLRHKLSSFILKNPPD                NVRGGGLSISDIAQGKSQ
Sbjct: 121 CKACGKRTPMDLRHKLSSFILKNPPDSVSGSKKKKKAATASANVRGGGLSISDIAQGKSQ 180

Query: 181 NAPSDGTGSSTPQHHDEDEDELSRQIKAAASTLEDIEVKDDEWAVDMSEEAIRARAKELE 240
           NAPSDGTGSSTPQHHDEDEDELSRQIKAAASTLEDIEVKDDEWAVDMSEEAIRARAKELE
Sbjct: 181 NAPSDGTGSSTPQHHDEDEDELSRQIKAAASTLEDIEVKDDEWAVDMSEEAIRARAKELE 240

Query: 241 VNSELTQLDEYGEWILEQAGEDKENLPSDVELYKKAAELDVLNDPKIGCVLAQCLFDEDI 300
           VNSELTQLDEYGEWILEQAGEDKENLPSDVELYKKAAELDVLNDPKIGCVLAQCLFDEDI
Sbjct: 241 VNSELTQLDEYGEWILEQAGEDKENLPSDVELYKKAAELDVLNDPKIGCVLAQCLFDEDI 300

Query: 301 VNEIAEHNAFFTKILVTPEYEKNFMGGIERFLGLEHKDLIPLLPKILVQLYNNDIISEEE 360
           VNEIAEHNAFFTKILVTPEYEKNFMGGIERFLGLEHKDLIPLLPKILVQLYNNDIISEEE
Sbjct: 301 VNEIAEHNAFFTKILVTPEYEKNFMGGIERFLGLEHKDLIPLLPKILVQLYNNDIISEEE 360

Query: 361 IMRFGTKSSKKFVPKEVSKKVRRAAKPFITWL 392
           IMRFGTKSSKKFVPKEVSKKVRRAAKPFITWL
Sbjct: 361 IMRFGTKSSKKFVPKEVSKKVRRAAKPFITWL 392


>gi|1170512|sp|Q09689|IF5_SCHPO PROBABLE EUKARYOTIC TRANSLATION
           INITIATION FACTOR 5 (EIF-5) >gi|2130374|pir||S58149
           hypothetical protein SPAC2F7.05c - fission yeast
           (Schizosaccharomyces pombe) >gi|1052788|emb|CAA90492|
           (Z50142) unknown [Schizosaccharomyces pombe]
           Length = 395
           
 Score =  328 bits (831), Expect = 5e-89
 Identities = 177/409 (43%), Positives = 246/409 (59%), Gaps = 55/409 (13%)

Query: 2   SINICRDNHDPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFEL 61
           +INI RD  D FYRY+MP +Q+K+EG+GNGIKT + N++DI+ AL RP  Y+ K+FGFEL
Sbjct: 3   TINIRRDVKDSFYRYRMPKLQSKIEGKGNGIKTVIPNMSDIAKALGRPPLYVTKFFGFEL 62

Query: 62  GAQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIIT-KDNDLVRD 120
           GAQT+I  D DRY+VNG H+  KLQD+LD FI +FVLC SC+NPETE+ I  KD  +  D
Sbjct: 63  GAQTTIIADMDRYIVNGAHDAGKLQDLLDVFIRRFVLCASCQNPETELSINKKDQTISYD 122

Query: 121 CKACGKRTPMDLRHKLSSFILKNPPDXXXXXXXXXXXXXXXXNVRGGGLSISDIAQGKSQ 180
           CKACG R  +D RHKL+  I+KNPP                             A+ KS 
Sbjct: 123 CKACGYRGVIDGRHKLTGVIVKNPP-----------------------------AKKKSH 153

Query: 181 NAPSDGTGSSTPQHHDEDEDELSRQIKAAASTLEDIE-VKDDEWAVDMSEEAIRARAKEL 239
               D   S   +  D  EDEL+R+I+  A+ L   E V D++WAVD SEEA+RAR +EL
Sbjct: 154 KHKRD---SPVAEEEDGAEDELTRRIRQEAAELPTAEVVNDEDWAVDTSEEAVRARVQEL 210

Query: 240 EVN----------------SELTQLDEYGEWILEQAGEDKENLPSDVELYKKAAELDVLN 283
           E N                +E ++ D++GEW+     ED     SDVE+YKK  E ++ +
Sbjct: 211 EGNMKDSLTLSDLRGDEEEAESSRYDQFGEWL-----EDNYPGVSDVEIYKKMKEENIHH 265

Query: 284 DPKIGCVLAQCLFDEDIVNEIAEHNAFFTKILVTPEYEKNFMGGIERFLGLEHKDLIPLL 343
             K   VL QC+     V E  +H A F K+  T ++E+  +GG ER +       I ++
Sbjct: 266 KSKAIVVLVQCIITSPYVGEFEKHGALFKKLCTTDKHERALLGGFERLMENTELVHIDVV 325

Query: 344 PKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKKVRRAAKPFITWL 392
           PK+L+++Y ND++S++   ++G K+SKK+V +E SKK+  AA+PF+TWL
Sbjct: 326 PKVLLEIYQNDLVSDDMFEKWGAKASKKYVSRETSKKIHEAAEPFLTWL 374


>gi|585303|sp|Q07205|IF5_RAT EUKARYOTIC TRANSLATION INITIATION
           FACTOR 5 (EIF-5) >gi|423835|pir||A47305 translation
           initiation factor eIF-5 - rat >gi|294545 (L11651)
           eukaryotic initiation factor 5 [Rattus norvegicus]
           Length = 429
           
 Score =  256 bits (647), Expect = 2e-67
 Identities = 157/415 (37%), Positives = 224/415 (53%), Gaps = 58/415 (13%)

Query: 1   MSINICRDNHDPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFE 60
           MS+N+ R   D FYRYKMP + AKVEG+GNGIKT ++N+ D++ ALNRP  Y  KYFG E
Sbjct: 1   MSVNVNRSVSDQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCE 60

Query: 61  LGAQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIIT-KDNDLVR 119
           LGAQT   V  DRY+VNG HE  KLQD+LDGFI KFVLC  C+NPET++ +  K   +  
Sbjct: 61  LGAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGN 120

Query: 120 DCKACGKRTPMDLRHKLSSFILKNPPDXXXXXXXXXXXXXXXXNVRGGGLSISDIAQGKS 179
            CKACG R  +D  HKL +FILKNPP+                         SDI  GK 
Sbjct: 121 SCKACGYRGMLDTHHKLCTFILKNPPEN------------------------SDIGTGKK 156

Query: 180 QNAPSDGTGSSTPQHHDEDEDELSRQIKAAASTLEDI-------EVKDDEWAVDMSEEAI 232
           +    +  G       D++   +S           +I       E +DD+W  D +EEA 
Sbjct: 157 EKEKKNRKGK------DKENGSVSTSETPPPPPPNEISPPHAVEEEEDDDWGEDTTEEAQ 210

Query: 233 RARAKELEVNSE-LTQLDEYGEWILEQAGEDKENLPSDVELYKK------------AAEL 279
           R R  E+  +++ LT  D+     LE+  E++ N+  D    KK             AE 
Sbjct: 211 RRRMDEISDHAKGLTLSDD-----LERTVEERVNILFDFVKKKKEEGIIDSSDKDIVAEA 265

Query: 280 DVLNDPKIG-CVLAQCLFDEDIVNEIAEHNAFFTKIL-VTPEYEKNFMGGIERFLGLEHK 337
           + L+   +G  VL + LFDE I  +I ++   F +      + ++  + G+E  + +   
Sbjct: 266 ERLDVKAMGPLVLTEVLFDEKIREQIKKYRRHFLRFCHNNKKAQRYLLHGLECVVAMHQA 325

Query: 338 DLIPLLPKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKKVRRAAKPFITWL 392
            LI  +P IL ++Y+ D++ EE I+ +  K+SKK+V KE++K++R  A+PFI WL
Sbjct: 326 QLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFIKWL 380


>gi|1708419|sp|P55010|IF5_HUMAN EUKARYOTIC TRANSLATION INITIATION
           FACTOR 5 (EIF-5) >gi|1229140 (U49436) translation
           initiation factor 5 [Homo sapiens]
           Length = 431
           
 Score =  252 bits (636), Expect = 4e-66
 Identities = 150/409 (36%), Positives = 220/409 (53%), Gaps = 44/409 (10%)

Query: 1   MSINICRDNHDPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFE 60
           MS+N+ R   D FYRYKMP + AKVEG+GNGIKT ++N+ D++ ALNRP  Y  KYFG E
Sbjct: 1   MSVNVNRSVSDQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCE 60

Query: 61  LGAQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIIT-KDNDLVR 119
           LGAQT   V  DRY+VNG HE  KLQD+LDGFI KFVLC  C+NPET++ +  K   +  
Sbjct: 61  LGAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGN 120

Query: 120 DCKACGKRTPMDLRHKLSSFILKNPPDXXXXXXXXXXXXXXXXNVRGGGLSISDIAQGKS 179
            CKACG R  +D  HKL +FILKNPP+                N +G       ++  ++
Sbjct: 121 SCKACGYRGMLDTHHKLCTFILKNPPE--NSDSGTGKKEKEKKNRKGKDKENGSVSSSET 178

Query: 180 QNAPSDGTGSSTPQHHDEDEDELSRQIKAAASTLEDIEVKDDEWAVDMSEEAIRARAKEL 239
              P      + P H  E+E+                   DD+   D +EEA R R  E+
Sbjct: 179 PPPPPPPNEINPPPHTMEEEE-------------------DDDSGEDTTEEAQRRRMDEI 219

Query: 240 EVNSELTQLDEYGEWILEQAGEDKENL---------------PSDVELYKKAAELDVLND 284
             ++++  L +     LE+  E++ N+                SD E+  +A  LDV   
Sbjct: 220 SDHAKVLTLSD----DLERTIEERVNILFDFVKKKKEEGVIDSSDKEIVAEAERLDVKAM 275

Query: 285 PKIGCVLAQCLFDEDIVNEIAEHNAFFTKIL-VTPEYEKNFMGGIERFLGLEHKDLIPLL 343
             +  VL + LF+E I  +I ++   F +      + ++  + G+E  + +    LI  +
Sbjct: 276 GPL--VLTEVLFNEKIREQIKKYRRHFLRFCHNNKKAQRYLLHGLECVVAMHQAQLISKI 333

Query: 344 PKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKKVRRAAKPFITWL 392
           P IL ++Y+ D++ EE I+ +  K+SKK+V KE++K++R  A+PFI WL
Sbjct: 334 PHILKEMYDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFIKWL 382


>gi|2494319|sp|Q22918|IF5_CAEEL EUKARYOTIC TRANSLATION INITIATION
           FACTOR 5 (EIF-5) >gi|1465837 (U64857) No definition line
           found [Caenorhabditis elegans]
           Length = 441
           
 Score =  216 bits (545), Expect = 2e-55
 Identities = 138/409 (33%), Positives = 211/409 (50%), Gaps = 52/409 (12%)

Query: 1   MSINICRDNHDPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYI-----VK 55
           M++N+ R   DPFYRYKMP + AKVEG+GNGIKT + N+++I+ AL RP   +      K
Sbjct: 1   MALNVNRAVADPFYRYKMPKLSAKVEGKGNGIKTVISNMSEIAKALERPPMCMFIANPTK 60

Query: 56  YFGFELGAQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDN 115
           YFG ELGAQT+     +RY+VNG H+  KLQD+LDGFI KFVLC SC+NPET++ + K N
Sbjct: 61  YFGCELGAQTNFDAKNERYIVNGEHDANKLQDILDGFIKKFVLCKSCENPETQLFVRK-N 119

Query: 116 DLVRDCKACGKRTPMDLRHKLSSFILKNPPDXXXXXXXXXXXXXXXXNVRGGGLSISDIA 175
           ++   CKACG    +DL+HKLS+FI+KNPP                        S ++  
Sbjct: 120 NIKSKCKACGCSFDIDLKHKLSTFIMKNPPKIDV------------------DFSKAEQK 161

Query: 176 QGKSQNAPSDGTGSSTPQHHDEDEDELSRQIKAAASTLEDIEVKDDEWAVDMSEEAIRAR 235
            GK  +        +    H+ D+           S+ +D    DD+W  +  E      
Sbjct: 162 NGKKTSGADAAAAVAADIIHNSDK----------GSSNDD---DDDDWEPEPVEPNGMLS 208

Query: 236 A--------KELEVNSELTQLDEYGEWILEQAGEDK-ENLPSDVELYKKAAELDVLNDPK 286
           A        K+LE  SE  +LD    + L+   ED+  +      L  +A  L++    K
Sbjct: 209 AGMGKLVLDKDLE-KSEEQRLDMLHTFFLKAKEEDRISDAKGQTALRDEAERLEL--KQK 265

Query: 287 IGCVLAQCLFDEDIV--NEIAEH-NAFFTKILVTPEYEKNFMGGIERFLGLEHKDLIPLL 343
              +LA    DE ++   +I++H N      L   + ++  +GG+E+ +     +L+   
Sbjct: 266 ASLLLANVFLDEKVITDKQISKHRNLLLRFTLNDKKAQRYLLGGVEQVIHKHEAELLSKS 325

Query: 344 PKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKKVRRAAKPFITWL 392
             I+  LY+ D+  E+ ++ +G K S K+V K  +KK+   ++P + WL
Sbjct: 326 AHIIKSLYDEDVCEEDSLISWGEKPSSKYVSKSFAKKIIENSQPVLNWL 374


>gi|1352439|sp|P48724|IF5_PHAVU EUKARYOTIC TRANSLATION INITIATION
           FACTOR 5 (EIF-5) >gi|1008881 (L47221) eukaryotic
           initiation factor 5 [Phaseolus vulgaris]
           Length = 443
           
 Score =  177 bits (445), Expect = 1e-43
 Identities = 135/429 (31%), Positives = 201/429 (46%), Gaps = 49/429 (11%)

Query: 8   DNHDPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELGAQTSI 67
           ++ D FYRYKMP +  K+EGRGNGIKT V+N+ DI+  L RPA Y  KYFG ELGAQ+  
Sbjct: 10  NSDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKRLARPASYTTKYFGCELGAQSKF 69

Query: 68  SVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRDCKACGKR 127
                   VNG HE AKL  +L+ FI K+V C  C NPETEI+ITK+  +   C ACG  
Sbjct: 70  DEKTGTSHVNGAHETAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFV 129

Query: 128 TPMDLRHKLSSFILKNPPD-XXXXXXXXXXXXXXXXNVRGGGLSISDI------AQGKSQ 180
           + +D+R KL++FI+KNPP+                  ++ G  +  ++       + K  
Sbjct: 130 SDVDMRDKLTTFIVKNPPEVKKGSKDKKAMRRAEKERLKEGEAADEELKKVKKEVKKKGS 189

Query: 181 NAPSDGTGSST---PQHHDEDEDELS---RQIKAAASTLEDIEVKDD--EWAVDMSEEAI 232
           ++  DGT  ST    +    DED  S   +QI+      ++ +  DD  +W  D S +A 
Sbjct: 190 SSAKDGTAKSTISKKKGSGSDEDRRSPTHKQIEEKEEAKDEDDDDDDGVQWLTDTSLDAS 249

Query: 233 RARAKE--LEVNSELTQL--DE----------------------YGEWILEQAGEDKENL 266
           R R KE    V +++  L  DE                      YG  + E     K+  
Sbjct: 250 RQRIKEQLSAVTADMVMLTTDEPEKKKKAASNQNGGSQNGNSKNYGTVVAEVKANLKKGF 309

Query: 267 PSDVELYKKAAELDVLNDPKIGCVLAQCLF---DEDIVNEIAEHNAFFTKILVTPEYEKN 323
            +  EL    A L V    K+   L + LF   ++    E  +   +F   +     +  
Sbjct: 310 GAS-ELLSHLAALPVPAQEKMS-ALVEALFEGTEKGFGRETLKKKNYFAAAVAEEGSQIL 367

Query: 324 FMGGIERFLGLEHKDLIPLLPKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKKVRR 383
            +  IE F    + + +  +  +L  LY+ D++ EE I+ +  K  K       + K+ +
Sbjct: 368 LLHAIEEFCCKPNSNALKEVALVLKTLYDADVLEEEAIVLWYQKGLK---GDNKNSKIWK 424

Query: 384 AAKPFITWL 392
            A+PFI WL
Sbjct: 425 NAQPFIDWL 433


>gi|4160402|emb|CAA10616| (AJ132240) eukaryotic translation
           initiation factor 5 [Zea mays]
           Length = 451
           
 Score =  173 bits (433), Expect = 2e-42
 Identities = 134/432 (31%), Positives = 198/432 (45%), Gaps = 55/432 (12%)

Query: 11  DPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVD 70
           D FYRYKMP +  K+EGRGNGIKT V+N+ DI+ AL RPA Y  KYFG ELGAQ+     
Sbjct: 13  DAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEK 72

Query: 71  KDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRDCKACGKRTPM 130
               LVNG H+ AKL  +L+ FI K+V C  C NPETEI+I+K   +   C ACG  + +
Sbjct: 73  TGISLVNGAHDTAKLAGLLEVFIKKYVQCYGCGNPETEILISKTQMISLKCAACGFVSDV 132

Query: 131 DLRHKLSSFILKNPPDXXXXXXXXXXXXXXXXNVRGGGLSISDIAQGKSQNAPSDGTGSS 190
           D+R KL++FILKNPP+                     G +  +  +   ++A   G+  S
Sbjct: 133 DMRDKLTTFILKNPPEQKKGGKDKKAMRRAEKERLKEGEAADEEQKKLKKDAKKKGSKDS 192

Query: 191 TPQ----------HHDEDEDELSRQIKAAASTLEDIEVKDDEWAVDMSEEAIRARAKE-- 238
           T +            DED      +         D +  D +W  D S EA + R +E  
Sbjct: 193 TAKGLKKKATTATGSDEDHSSSPTRSHDGDKAAADDDDDDVQWQTDTSIEAAKQRMQEQL 252

Query: 239 LEVNSELTQLD-EYGEWILEQA--------GEDKENLPSDVELYKKAAELDVL------- 282
               +E+  L  E  E  ++Q         G  KE +P+D     K +  + L       
Sbjct: 253 SAATAEMVMLSTEETEKKMKQPTHKDGSTNGSAKE-IPNDKPAVTKPSPYEELIGDIKAS 311

Query: 283 -----NDPKIGCVLA-QCLFDEDIVNEIAE------HNAFFTKILVTPEY---------- 320
                   ++  VLA   L  +D++N + E         F  +++   +Y          
Sbjct: 312 LGSAPTPSQLKAVLASSTLPPQDVMNALLEALFGGVGKGFTKEVVKNKKYLAVAVPDEGA 371

Query: 321 EKNFMGGIERFLGLEHKDLIPLLPKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKK 380
           +   +  IE F G  + + +  +P +L  LY+ DI+ EE I+ +   +    V      +
Sbjct: 372 QTLLVQAIEAFGGKCNPEALKEVPVVLKALYDGDILDEETIVDWYNDA----VAAGKDSQ 427

Query: 381 VRRAAKPFITWL 392
           V + AKPF+ WL
Sbjct: 428 VVKNAKPFVEWL 439


>gi|2494320|sp|P55876|IF5_MAIZE EUKARYOTIC TRANSLATION INITIATION
           FACTOR 5 (EIF-5) >gi|1806575|emb|CAA67868| (X99517)
           Eukaryotic initiation factor-5 [Zea mays]
           Length = 451
           
 Score =  171 bits (430), Expect = 6e-42
 Identities = 132/432 (30%), Positives = 196/432 (44%), Gaps = 55/432 (12%)

Query: 11  DPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVD 70
           D FYRYKMP +  K+EGRGNGIKT V+N+ DI+ AL RPA Y  KYFG ELGAQ+     
Sbjct: 13  DAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEK 72

Query: 71  KDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRDCKACGKRTPM 130
               LVNG H+ AKL  +L+ FI K+V C  C NPETEI+I+K   +   C ACG  + +
Sbjct: 73  TGISLVNGAHDTAKLAGLLEVFIKKYVQCYGCGNPETEILISKTQMISLKCAACGFVSDV 132

Query: 131 DLRHKLSSFILKNPPDXXXXXXXXXXXXXXXXNVRGGGLSISDIAQGKSQNAPSDGTGSS 190
           D+R KL++FILKNPP+                     G +  +  +   ++A   G+  S
Sbjct: 133 DMRDKLTTFILKNPPEQKKGGKDKKAMRRAEKERLKEGEAADEEQKKLKKDAKKKGSKDS 192

Query: 191 TPQ----------HHDEDEDELSRQIKAAASTLEDIEVKDDEWAVDMSEEAIRARAKE-- 238
           T +            DED      +         D +  D +W  D S EA + R +E  
Sbjct: 193 TAKGLKKKATTATGSDEDHSSSPTRSHDGDKAAADDDDDDVQWQTDTSIEAAKQRMQEQL 252

Query: 239 LEVNSELTQLD-EYGEWILEQA--------GEDKENLPSDVELYKKAAELDVL------- 282
               +E+  L  E  E  ++Q         G  KE +P+D     K +  + L       
Sbjct: 253 SAATAEMVMLSTEETEKKMKQPTHKDGSTNGSAKE-IPNDKPAVTKPSPYEELIGDIKAS 311

Query: 283 -----NDPKIGCVLA-QCLFDEDIVN----------------EIAEHNAFFTKILVTPEY 320
                   ++  VLA   L  +D++N                E+ ++  +    +     
Sbjct: 312 LGSAPTPSQLKAVLASSTLPPQDVMNAPLEALFGGVGKGFTKEVVKNKKYLAVAVPDEGA 371

Query: 321 EKNFMGGIERFLGLEHKDLIPLLPKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKK 380
           +   +  IE F G  + + +  +P +L  LY+ DI+ EE I+ +   +    V      +
Sbjct: 372 QTLLVQAIEAFGGKCNPEALKEVPVVLKALYDGDILDEETIVDWYNDA----VAAGKDSQ 427

Query: 381 VRRAAKPFITWL 392
           V + AKPF+ WL
Sbjct: 428 VVKNAKPFVEWL 439


>gi|2494318|sp|Q26891|IF5_TRICA EUKARYOTIC TRANSLATION INITIATION
           FACTOR 5 (EIF-5) >gi|1208931|emb|CAA93623| (Z69735)
           initiation factor 5-like protein [Tribolium castaneum]
           Length = 162
           
 Score =  102 bits (252), Expect = 4e-21
 Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 26/171 (15%)

Query: 88  VLDGFINKFVLCGSCKNPETEIII-TKDNDLVRDCKACGKRTPMDLRHKLSSFILKNPPD 146
           +LDGFI KFVLC  C+NPETE+++ TK + + + CKACG  +P++  HKL +FILKNPP+
Sbjct: 2   LLDGFIRKFVLCPECENPETELLVSTKRSTISQGCKACGYHSPLESNHKLVTFILKNPPN 61

Query: 147 XXXXXXXXXXXXXXXXNVRGGGLSISDIAQGKSQNAPSDGTGSSTPQHHDEDEDELSRQI 206
                           N    G S+++  + K    P+  T   T Q  D++E  L   +
Sbjct: 62  ---------------LNPAVQGSSLTEGKRSKRSKRPNGDTNGDTSQVDDQNE-SLEASV 105

Query: 207 KAAASTLEDIEVKDDEWAVDMSEEAIRAR-------AKELEVNSELTQLDE 250
              +   +D E    EW  D+SEEA+RAR       AK + +N +L + ++
Sbjct: 106 NENSKNGDDDE--GHEWQADVSEEAVRARMQDLTEGAKNMTINDDLEKREK 154


>gi|3024016|sp|P56329|IF2B_SCHPO PROBABLE EUKARYOTIC TRANSLATION
           INITIATION FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
           >gi|2330846|emb|CAB11076| (Z98531) translational
           initiation factor 2 beta [Schizosaccharomyces pombe]
           Length = 310
           
 Score = 62.5 bits (149), Expect = 5e-09
 Identities = 38/113 (33%), Positives = 67/113 (58%), Gaps = 10/113 (8%)

Query: 15  RYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVD-KDR 73
           +Y + P     EG+    KT   N++DIS  ++R   +++++   ELG  TS SVD   R
Sbjct: 183 KYTIVPPSVHREGK----KTIFANISDISKRMHRSLDHVIQFLFAELG--TSGSVDGSSR 236

Query: 74  YLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDL-VRDCKACG 125
            ++ G  +  ++++VL  +I ++V C +CK+P+T  I+TK+N +    C+ACG
Sbjct: 237 LIIKGRFQQKQIENVLRRYIVEYVTCKTCKSPDT--ILTKENRIFFMTCEACG 287


>gi|3122238|sp|O27958|IF2B_ARCFU PUTATIVE TRANSLATION INITIATION
           FACTOR 2 BETA SUBUNIT (EIF-2-BETA) >gi|2648194
           (AE000944) translation initiation factor eIF-2, subunit
           beta, putative [Archaeoglobus fulgidus]
           Length = 137
           
 Score = 62.1 bits (148), Expect = 7e-09
 Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 7/116 (6%)

Query: 15  RYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVDKDRY 74
           R+++P +  + EG     +T + N + I+  LNR   ++ KY    LG  T+  +D  R 
Sbjct: 26  RFEIPRVSIQREGA----RTILKNFSQIAKTLNRSEDHLYKYIVKSLG--TAGFIDNGRL 79

Query: 75  LVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRDCKACGKRTPM 130
           ++ G    ++LQ  +D ++  +VLC  C +P+TE  I ++  L+  C ACG + P+
Sbjct: 80  VLQGKFTESELQKEVDDYVRLYVLCRECNSPDTE-FIKEERVLMLRCLACGAKHPV 134


>gi|3122237|sp|O27797|IF2B_METTH PUTATIVE TRANSLATION INITIATION
           FACTOR 2 BETA SUBUNIT (EIF-2-BETA) >gi|2622899
           (AE000932) translation initiation factor eIF-2, beta
           subunit   [Methanobacterium thermoautotrophicum]
           Length = 135
           
 Score = 61.7 bits (147), Expect = 9e-09
 Identities = 32/116 (27%), Positives = 66/116 (56%), Gaps = 7/116 (6%)

Query: 15  RYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVDKDRY 74
           R+++P   + ++G     +T + N  +++ ALNR   +++K+   ELG  T+ +++  R 
Sbjct: 24  RFEVPKAYSVIQGN----RTFIQNFREVADALNRDPQHLLKFLLRELG--TAGNLEGGRA 77

Query: 75  LVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRDCKACGKRTPM 130
           ++ G      + + ++ ++NKFV+C  C  P+T II      L++ C+ACG + P+
Sbjct: 78  ILQGKFTHFLINERIEDYVNKFVICHECNRPDTRIIREGRISLLK-CEACGAKAPL 132


>gi|3257011|gnl|PID|d1030637 (AP000003) 140aa long hypothetical
           translation initiation factor eIF-2 beta [Pyrococcus
           horikoshii]
           Length = 140
           
 Score = 60.9 bits (145), Expect = 1e-08
 Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 7/116 (6%)

Query: 15  RYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVDKDRY 74
           R+++P     +EG     KT + N  DI+ ALNR   +++K+   E+   T+ +++  R 
Sbjct: 29  RFEVPGALVTIEGN----KTIIENFKDIAEALNRDPQHLLKFLLREIA--TAGTLEGKRV 82

Query: 75  LVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRDCKACGKRTPM 130
           ++ G   P  + + L  +I ++V+C  C +P+T+ II +D      C+ACG  TP+
Sbjct: 83  VLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTK-IIKRDRFYFLKCEACGAETPI 137


>gi|124205|sp|P09064|IF2B_YEAST EUKARYOTIC TRANSLATION INITIATION
           FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
           >gi|320774|pir||S29368 translation initiation factor
           eIF-2 beta chain - yeast (Saccharomyces cerevisiae)
           >gi|171450 (M21813) translation initiation factor elF2
           beta-subunit [Saccharomyces cerevisiae]
           >gi|1061252|emb|CAA91607| (Z67751) SUI3 [Saccharomyces
           cerevisiae] >gi|1370491|emb|CAA97959| (Z73594) ORF
           YPL237w [Saccharomyces cerevisiae]
           Length = 285
           
 Score = 57.8 bits (137), Expect = 1e-07
 Identities = 33/112 (29%), Positives = 62/112 (54%), Gaps = 6/112 (5%)

Query: 15  RYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVDKDRY 74
           ++++PP     +G+    KT   N+ DI+  L+R   ++++Y   ELG   S+   K R 
Sbjct: 157 KFRIPPPVCLRDGK----KTIFSNIQDIAEKLHRSPEHLIQYLFAELGTSGSVDGQK-RL 211

Query: 75  LVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDL-VRDCKACG 125
           ++ G  +  ++++VL  +I ++V C +CK+  TE+   + N L    CK+CG
Sbjct: 212 VIKGKFQSKQMENVLRRYILEYVTCKTCKSINTELKREQSNRLFFMVCKSCG 263


>gi|1170497|sp|P41375|IF2B_DROME EUKARYOTIC TRANSLATION INITIATION
           FACTOR 2 BETA SUBUNIT (EIF-2-BETA) >gi|304676 (L19197)
           eIF-2 beta-subunit [Drosophila melanogaster]
           Length = 312
           
 Score = 56.2 bits (133), Expect = 4e-07
 Identities = 34/97 (35%), Positives = 59/97 (60%), Gaps = 6/97 (6%)

Query: 33  KTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVDKDRYLV-NGVHEPAKLQDVLDG 91
           KT+  N  DI+  L+R   +++ +   ELG  TS S+D ++ L+  G  +P ++++VL  
Sbjct: 195 KTSFANFMDIAKTLHRLPKHLLDFLLAELG--TSGSMDGNQQLIIKGRFQPKQIENVLRR 252

Query: 92  FINKFVLCGSCKNPETEIIITKDNDL-VRDCKACGKR 127
           +I ++V C +C++PET  I+ KD  L    C++CG R
Sbjct: 253 YIKEYVTCHTCRSPET--ILQKDTRLFFLQCESCGSR 287


>gi|3024028|sp|Q41969|IF2B_ARATH EUKARYOTIC TRANSLATION INITIATION
           FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
           Length = 156
           
 Score = 55.8 bits (132), Expect = 5e-07
 Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 11/129 (8%)

Query: 4   NICRDNHDPFY----RYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGF 59
           NI R+N+        R  M P Q   EG     KT  +N  D+   ++R   ++++Y   
Sbjct: 31  NILRENNPELAGDRRRTVMRPPQVLREGTK---KTVFVNFMDLCKTMHRQPDHVMQYLLA 87

Query: 60  ELGAQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDL-V 118
           ELG   S+   + R +V G   P   + +L  +I  +V+C  CK+P+T  I+ K+N L  
Sbjct: 88  ELGTSGSLD-GQQRLVVKGRFAPKNFEGILRRYITDYVICLGCKSPDT--ILXKENXLFF 144

Query: 119 RDCKACGKR 127
             C+ CG +
Sbjct: 145 LRCEKCGSQ 153


>gi|3122234|sp|O24473|IF2B_WHEAT EUKARYOTIC TRANSLATION INITIATION
           FACTOR 2 BETA SUBUNIT (EIF-2-BETA) (P38) >gi|2306768
           (U87163) eIF-2 beta subunit [Triticum aestivum]
           Length = 270
           
 Score = 55.4 bits (131), Expect = 6e-07
 Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 11/127 (8%)

Query: 4   NICRDNHDPFY----RYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGF 59
           NI R+N+        R  M P Q   EG     KT  +N  D+   ++R   +++ +   
Sbjct: 127 NILRENNPDLAGDRRRTVMRPPQVLREGTK---KTVFVNFMDLCKTMHRQPEHVMMFLLA 183

Query: 60  ELGAQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDL-V 118
           E+G   S+   + R ++ G   P   + +L  +IN++V+C  CK+P+T  I++K+N L  
Sbjct: 184 EMGTSGSLD-GQQRLVIKGRFAPKNFEAILRRYINEYVICHGCKSPDT--ILSKENRLFF 240

Query: 119 RDCKACG 125
             C+ CG
Sbjct: 241 LRCEQCG 247


>gi|2495796|sp|Q57562|IF2B_METJA PUTATIVE TRANSLATION INITIATION
           FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
           >gi|2129319|pir||A64312 translation initiation factor
           eIF-2 beta homolog - Methanococcus jannaschii
           >gi|1498862 (U67467) translation initiation factor
           aIF-2, subunit beta, putative (aIF2B) [Methanococcus
           jannaschii]
           Length = 143
           
 Score = 53.9 bits (127), Expect = 2e-06
 Identities = 31/116 (26%), Positives = 61/116 (51%), Gaps = 7/116 (6%)

Query: 15  RYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVDKDRY 74
           R+++P I+  +EG     +T + N  +++ A+NR   +  KY   E G+  ++  +  R 
Sbjct: 32  RFELPEIEILIEGN----RTIIRNFRELAKAVNRDEEFFAKYLLKETGSAGNL--EGGRL 85

Query: 75  LVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRDCKACGKRTPM 130
           ++     P  L+  ++ F+ ++V+C  C  P+T+II      L++ C ACG   P+
Sbjct: 86  ILQRRISPELLKSRINDFLREYVICRECGKPDTKIIKEGRVHLLK-CMACGAIRPI 140


>gi|3024027|sp|Q21230|IF2B_CAEEL PUTATIVE EUKARYOTIC TRANSLATION
           INITIATION FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
           Length = 185
           
 Score = 52.7 bits (124), Expect = 4e-06
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 9/115 (7%)

Query: 14  YRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVDKDR 73
           +  K+P +      R    KTA  N  +I   + R   +++++   ELG   SI    + 
Sbjct: 49  FAIKLPEV-----ARAGSKKTAFSNFLEICRLMKRQDKHVLQFLLAELGTTGSID-GSNC 102

Query: 74  YLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDL-VRDCKACGKR 127
            +V G  +  + + VL  +I ++V+C +CK+PET+  +TKD  L    C  CG R
Sbjct: 103 LIVKGRWQQKQFESVLRKYIKEYVMCHTCKSPETQ--LTKDTRLFFLQCTNCGSR 155


>gi|3875263|emb|CAA99824| (Z75533) similar to translational
           initiation factor 2 beta subunit; cDNA EST CEMSD33F
           comes from this gene; cDNA EST yk210c10.5 comes from
           this gene; cDNA EST yk466e12.5 comes from this gene;
           cDNA EST yk427h8.5 comes from this ...
           >gi|3878271|emb|CAB00049| (Z75712) similar to
           translational initiation factor 2 beta subunit; cDNA EST
           CEMSD33F comes from this gene; cDNA EST yk210c10.5 comes
           from this gene; cDNA EST yk466e12.5 comes from this
           gene; cDNA EST yk427h8.5 comes from this ...
           Length = 250
           
 Score = 52.7 bits (124), Expect = 4e-06
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 9/115 (7%)

Query: 14  YRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVDKDR 73
           +  K+P +      R    KTA  N  +I   + R   +++++   ELG   SI    + 
Sbjct: 114 FAIKLPEV-----ARAGSKKTAFSNFLEICRLMKRQDKHVLQFLLAELGTTGSID-GSNC 167

Query: 74  YLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDL-VRDCKACGKR 127
            +V G  +  + + VL  +I ++V+C +CK+PET+  +TKD  L    C  CG R
Sbjct: 168 LIVKGRWQQKQFESVLRKYIKEYVMCHTCKSPETQ--LTKDTRLFFLQCTNCGSR 220


>gi|2494299|sp|P55871|IF2B_MALDO EUKARYOTIC TRANSLATION INITIATION
           FACTOR 2 BETA SUBUNIT (EIF-2-BETA) >gi|1732361 (U80269)
           translation initiation factor 2 beta [Malus domestica]
           Length = 307
           
 Score = 50.8 bits (119), Expect = 2e-05
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 15  RYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVDKDRY 74
           R  M P Q   EG     K   +N  D+   ++R   +++ +   ELG   S+   + R 
Sbjct: 179 RTVMRPPQVLREGTK---KAVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLD-GQQRL 234

Query: 75  LVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDL-VRDCKACG 125
           +V G   P   + +L  ++N++V+C  C++P+T  I++K+N L    C+ CG
Sbjct: 235 VVKGRFAPKNFEGILRRYVNEYVICLGCQSPDT--ILSKENRLFFLRCEKCG 284


>gi|729815|sp|P41035|IF2B_RABIT EUKARYOTIC TRANSLATION INITIATION
           FACTOR 2 BETA SUBUNIT (EIF-2-BETA)
           >gi|543157|pir||S38536 translation initiation factor
           eIF-2 beta chain - rabbit >gi|415861|emb|CAA52058|
           (X73836) eukaryotic initiation factor 2 beta (eIF-2
           beta) [Oryctolagus cuniculus]
           Length = 333
           
 Score = 50.0 bits (117), Expect = 3e-05
 Identities = 32/97 (32%), Positives = 55/97 (55%), Gaps = 6/97 (6%)

Query: 33  KTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVDKDRYLV-NGVHEPAKLQDVLDG 91
           KT+ +N  DI   L+R   +++ +   ELG  TS S+D +  LV  G  +  ++++VL  
Sbjct: 216 KTSFVNFTDICKLLHRQPKHLLAFLLAELG--TSGSIDGNNQLVIKGRFQQKQIENVLRR 273

Query: 92  FINKFVLCGSCKNPETEIIITKDNDL-VRDCKACGKR 127
           +I ++V C +C++P+T  I+ KD  L    C+ C  R
Sbjct: 274 YIKEYVTCHTCRSPDT--ILQKDTRLYFLQCETCHSR 308


>gi|632273|pir||JC2329 translation initiation factor eIF-2 beta
           chain - rabbit
           Length = 333
           
 Score = 50.0 bits (117), Expect = 3e-05
 Identities = 32/97 (32%), Positives = 55/97 (55%), Gaps = 6/97 (6%)

Query: 33  KTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVDKDRYLV-NGVHEPAKLQDVLDG 91
           KT+ +N  DI   L+R   +++ +   ELG  TS S+D +  LV  G  +  ++++VL  
Sbjct: 216 KTSFVNFTDICKLLHRQPKHLLAFLLAELG--TSGSIDGNNQLVIKGRFQQKQIENVLRR 273

Query: 92  FINKFVLCGSCKNPETEIIITKDNDL-VRDCKACGKR 127
           +I ++V C +C++P+T  I+ KD  L    C+ C  R
Sbjct: 274 YIKEYVTCHTCRSPDT--ILQKDTRLYFLQCETCHSR 308


>gi|124204|sp|P20042|IF2B_HUMAN EUKARYOTIC TRANSLATION INITIATION
           FACTOR 2 BETA SUBUNIT (EIF-2-BETA) >gi|87941|pir||A31226
           translation initiation factor eIF-2 beta chain - human
           >gi|109365|pir||S13147 protein synthesis factor - rabbit
           >gi|182067 (M29536) translational initiation factor beta
           subunit [Homo sapiens] >gi|227237|prf||1617105A
           initiation factor 2beta [Oryctolagus cuniculus]
           Length = 333
           
 Score = 48.8 bits (114), Expect = 6e-05
 Identities = 32/97 (32%), Positives = 55/97 (55%), Gaps = 6/97 (6%)

Query: 33  KTAVLNVADISHALNRPAPYIVKYFGFELGAQTSISVDKDRYLV-NGVHEPAKLQDVLDG 91
           KT+ +N  DI   L+R   +++ +   ELG  TS S+D +  LV  G  +  ++++VL  
Sbjct: 216 KTSFVNFTDICKLLHRQPKHLLAFLLAELG--TSGSIDGNNQLVIKGRFQQKQIENVLRR 273

Query: 92  FINKFVLCGSCKNPETEIIITKDNDL-VRDCKACGKR 127
           +I ++V C +C++P+T  I+ KD  L    C+ C  R
Sbjct: 274 YIKEYVTCHTCRSPDT--ILQKDIRLYFLQCETCHSR 308


  Database: nr
    Posted date:  Mar 13, 1999  7:20 PM
  Number of letters in database: 110,384,460
  Number of sequences in database:  361,503
  
Lambda     K      H
   0.316    0.136    0.394 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85924721
Number of Sequences: 361503
Number of extensions: 3570314
Number of successful extensions: 11382
Number of sequences better than 1.0e-03: 24
Number of HSP's better than  0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 11335
Number of HSP's gapped (non-prelim): 28
length of query: 405
length of database: 110384460
effective HSP length: 56
effective length of query: 349
effective length of database: 90140292
effective search space: 31458961908
effective search space used: 31458961908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 104 (44.9 bits)