| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 148819 | pchF | hypothetical | BPSS0587 | pyochelin synthetase Similar to Pseudomonas aeruginosa pyochelin synthetase PchF SWALL:Q9RFM7 (EMBL:AF184622) (1809 aa) fasta scores: E(): 1.1e-173, 56.86% id in 2019 aa. Weakly similar to Yersinia pestis yersiniabactin biosynthetic protein Irp2 or ypo1911 SWALL:Q8ZF24 (EMBL:AJ414150) (2035 aa) fasta scores: E(): 3.8e-91, 29% id in 1958 aa | genbank | 52212037 | CAH38044.1 | 2015 | 800407 | 806454 |
| 148820 | pchG | hypothetical | BPSS0588 | pyochelin biosynthetic protein Similar to Pseudomonas aeruginosa reductase required pyochelin biosynthesis PchG SWALL:Q9HWG5 (EMBL:AE004839) (349 aa) fasta scores: E(): 5e-68, 56.81% id in 345 aa, and to Yersinia enterocolitica Irp3 protein SWALL:O54512 (EMBL:Y12527) (365 aa) fasta scores: E(): 4.5e-15, 27.95% id in 347 aa | genbank | 52212038 | CAH38045.1 | 351 | 806451 | 807506 |
| 148821 | pchH | hypothetical | BPSS0589 | putative ATP-binding component of ABC transporter Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa4223 or PchH SWALL:Q9HWG6 (EMBL:AE004839) (570 aa) fasta scores: E(): 3.1e-92, 56.09% id in 574 aa, and to Streptomyces coelicolor putative ABC transporter ATP-binding protein SCO7689 or SC4C2.24 SWALL:Q9EWN8 (EMBL:AL939132) (608 aa) fasta scores: E(): 5.1e-53, 39.93% id in 571 aa | genbank | 52212039 | CAH38046.1 | 575 | 807503 | 809230 |
| 148822 | pchI | hypothetical | BPSS0590 | probable ATP-binding component of ABC transporter Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa4222 SWALL:Q9HWG7 (EMBL:AE004839) (574 aa) fasta scores: E(): 2.8e-97, 59.71% id in 556 aa, and to Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein rv1349 or mt1392 or mtcy02b10.13 SWALL:YD49_MYCTU (SWALL:Q11019) (579 aa) fasta scores: E(): 1.2e-33, 32.35% id in 578 aa | genbank | 52212040 | CAH38047.1 | 594 | 809227 | 811011 |
| 148823 | fptA | hypothetical | BPSS0591 | Fe(III)-pyochelin receptor precursor Similar to Pseudomonas aeruginosa Fe(III)-pyochelin receptor precursor FptA SWALL:FPTA_PSEAE (SWALL:P42512) (720 aa) fasta scores: E(): 1.5e-172, 63.05% id in 674 aa, and to the C-terminal region of Pseudomonas aeruginosa ferripyoverdine receptor precursor FpvA SWALL:FPVA_PSEAE (SWALL:P48632) (815 aa) fasta scores: E(): 1.9e-62, 31.42% id in 732 aa. Poor similarity to the P. aeruginosa FptA protein in the N-terminal region. CDS lacks a N-terminal signal sequence, effect on the function of the CDS is not known | genbank | 52212041 | CAH38048.1 | 750 | 811088 | 813340 |
| 148824 | hypothetical | BPSS0592 | putative membrane protein Similar to Pseudomonas aeruginosa FptB protein precursor pa4220 SWALL:FPTB_PSEAE (SWALL:P42513) (93 aa) fasta scores: E(): 0.00021, 38.82% id in 85 aa | genbank | 52212042 | CAH38049.1 | 88 | 813340 | 813606 | |
| 148825 | hypothetical | BPSS0593 | putative iron-regulated membrane protein Similar to Pseudomonas aeruginosa hypothetical protein pa0801 SWALL:Q9I5D7 (EMBL:AE004515) (506 aa) fasta scores: E(): 1.2e-18, 26.73% id in 520 aa. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa4219 SWALL:Y6B9_PSEAE (SWALL:P42514) (394 aa) fasta scores: E(): 9e-68, 53.62% id in 386 aa | genbank | 52212043 | CAH38050.1 | 504 | 813608 | 815122 | |
| 148826 | hypothetical | BPSS0594 | putative membrane protein Similar to Pseudomonas aeruginosa probable transporter pa4218 SWALL:Q9HWG8 (EMBL:AE004838) (414 aa) fasta scores: E(): 2.8e-105, 71.56% id in 408 aa. N-terminal region is similar to the N-terminal region of Escherichia coli AmpG protein SWALL:AMPG_ECOLI (SWALL:P36670) (491 aa) fasta scores: E(): 7e-12, 24.41% id in 344 aa | genbank | 52212044 | CAH38051.1 | 423 | 815139 | 816410 | |
| 148827 | hypothetical | BPSS0595 | 2Fe-2S iron-sulfur Similar to Synechococcus sp. ferredoxin I PetF SWALL:FER1_SYNP2 (SWALL:P31965) (96 aa) fasta scores: E(): 1.3e-07, 37.93% id in 87 aa, and to Equisetum telmateia ferredoxin I SWALL:FER1_EQUTE (SWALL:P00234) (95 aa) fasta scores: E(): 6.8e-08, 44.3% id in 79 aa | genbank | 52212045 | CAH38052.1 | 96 | 816784 | 817074 | |
| 148828 | hypothetical | BPSS0596 | sigma-54 activated regulatory protein Similar to Alcaligenes eutrophus acetoin catabolism regulatory protein AcoR SWALL:ACOR_ALCEU (SWALL:P28614) (668 aa) fasta scores: E(): 1.1e-63, 38.95% id in 652 aa, and to Xanthomonas axonopodis transcriptional regulator xac0654 SWALL:AAM35543 (EMBL:AE011694) (661 aa) fasta scores: E(): 2.8e-62, 40.25% id in 641 aa | genbank | 52212046 | CAH38053.1 | 646 | 817491 | 819431 | |
| 148829 | hypothetical | BPSS0597 | putative membrane protein Similar to an internal region of Chlorobium tepidum hypothetical protein CT1731 SWALL:Q8KBQ3 (EMBL:AE012927) (263 aa) fasta scores: E(): 0.99, 35.48% id in 62 aa. Possible gene remnant | genbank | 52212047 | CAH38054.1 | 64 | 819701 | 819895 | |
| 148830 | hypothetical | BPSS0598 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc1512 or rs03792 SWALL:Q8XZ92 (EMBL:AL646065) (92 aa) fasta scores: E(): 3.5e-11, 50.57% id in 87 aa, and to Ralstonia solanacearum hypothetical protein rsc1590 or rs03952 SWALL:Q8XZ16 (EMBL:AL646065) (95 aa) fasta scores: E(): 0.042, 36.47% id in 85 aa. Similar to BPSS0833, 59.140% identity (60.440% ungapped) in 93 aa overlap | genbank | 52212048 | CAH38055.1 | 95 | 820578 | 820865 | |
| 148831 | hypothetical | BPSS0599 | hypothetical protein Similar to Oryza sativa protein P0432C03.16 SWALL:Q8S9Q3 (EMBL:AP004031) (56 aa) fasta scores: E(): 2, 39.62% id in 53 aa | genbank | 52212049 | CAH38056.1 | 52 | 820930 | 821088 | |
| 148832 | hypothetical | BPSS0600 | putative membrane protein Similar to Rhizobium loti hypothetical protein mll4983 SWALL:Q98CV6 (EMBL:AP003005) (281 aa) fasta scores: E(): 7.3, 34.88% id in 86 aa. Possible gene remnant | genbank | 52212050 | CAH38057.1 | 94 | 821085 | 821369 | |
| 148833 | hypothetical | BPSS0601 | putative permease protein Similar to Ralstonia solanacearum probable transmembrane protein rsp1678 or rs02237 SWALL:Q8XPG3 (EMBL:AL646086) (434 aa) fasta scores: E(): 1.3e-123, 74.76% id in 432 aa, and to Comamonas acidovorans putative xanthine/uracil permease XprA SWALL:Q8RLB9 (EMBL:AY082333) (433 aa) fasta scores: E(): 3.1e-115, 69.14% id in 431 aa | genbank | 52212051 | CAH38058.1 | 433 | 821835 | 823136 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 148834 | hypothetical | BPSS0602 | hypothetical protein Poor database matches. Weakly similar to the C-terminal region of Caulobacter crescentus hypothetical protein cc3240 SWALL:Q9A3G4 (EMBL:AE005988) (318 aa) fasta scores: E(): 1.5e-16, 29.63% id in 189 aa | genbank | 52212052 | CAH38059.1 | 208 | 823379 | 824005 | |
| 148835 | hypothetical | BPSS0603 | hypothetical protein No significant database matches | genbank | 52212053 | CAH38060.1 | 100 | 824839 | 825141 | |
| 148836 | hypothetical | BPSS0604 | hypothetical protein C-terminal region is similar to Ralstonia solanacearum hypothetical protein rsc0324 or rs03291 SWALL:Q8Y2L1 (EMBL:AL646058) (119 aa) fasta scores: E(): 0.0023, 31.31% id in 99 aa. Possible alternative translational start site | genbank | 52212054 | CAH38061.1 | 128 | 825949 | 826335 | |
| 148837 | hypothetical | BPSS0605 | putative membrane protein Similar to Rhizobium meliloti hypothetical membrane protein rb0104 or smb20104 SWALL:Q92X58 (EMBL:AL603642) (252 aa) fasta scores: E(): 9.9e-15, 27.61% id in 239 aa, and to Methanosarcina acetivorans hypothetical protein ma1331 SWALL:Q8TR53 (EMBL:AE010803) (243 aa) fasta scores: E(): 6.6e-09, 24.18% id in 244 aa | genbank | 52212055 | CAH38062.1 | 241 | 827078 | 827803 | |
| 148838 | hypothetical | BPSS0606 | LysR family regulatory protein Similar to Escherichia coli glycine cleavage system transcriptional activator GcvA SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.3e-25, 30.16% id in 295 aa, and to Pseudomonas fluorescens positive transcriptional regulator PhnR SWALL:O69758 (EMBL:L49465) (299 aa) fasta scores: E(): 1.2e-48, 47.6% id in 292 aa | genbank | 52212056 | CAH38063.1 | 299 | 827920 | 828819 | |
| 148839 | hypothetical | BPSS0607 | aldehyde dehydrogenase family protein Similar to Streptococcus mutans NADP-dependent glyceraldehyde-3-phosphate dehydrogenase GapN SWALL:GAPN_STRMU (SWALL:Q59931) (475 aa) fasta scores: E(): 3.7e-47, 35.91% id in 426 aa, and to Rhizobium meliloti putative aldehyde dehydrogenase protein rb0979 or smb21539 SWALL:Q92UV7 (EMBL:AL603645) (485 aa) fasta scores: E(): 2.4e-85, 50.43% id in 456 aa. Also similar to BPSS0349 (482 aa) fasta scores: E(): 3.1e-100, 59.244% identity in 476 aa overlap | genbank | 52212057 | CAH38064.1 | 490 | 828849 | 830321 | |
| 148840 | hypothetical | BPSS0608 | TauD/TfdA family dioxygenase Similar to Alcaligenes eutrophus alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase TfdA SWALL:TFDA_ALCEU (SWALL:P10088) (287 aa) fasta scores: E(): 1.4e-20, 30.76% id in 260 aa, and to Pseudomonas aeruginosa hypothetical protein pa2310 SWALL:Q9I1G5 (EMBL:AE004657) (295 aa) fasta scores: E(): 5.4e-31, 35.94% id in 281 aa | genbank | 52212058 | CAH38065.1 | 292 | 830360 | 831238 | |
| 148841 | hypothetical | BPSS0609 | thiamine pyrophosphate enzyme family protein Similar to Streptomyces wedmorensis phosphonopyruvate decarboxylase Fom2 SWALL:Q56190 (EMBL:AB016934) (384 aa) fasta scores: E(): 3.2e-56, 47.48% id in 377 aa, and to Streptomyces viridochromogenes 3-phosphonopyruvate decarboxylase Ppd SWALL:O86938 (EMBL:Y14337) (397 aa) fasta scores: E(): 8.5e-37, 38.51% id in 405 aa | genbank | 52212059 | CAH38066.1 | 410 | 831174 | 832406 | |
| 148842 | hypothetical | BPSS0610 | putative phosphoenolpyruvate phosphomutase Similar to Tetrahymena pyriformis phosphoenolpyruvate phosphomutase precursor PepM SWALL:PEPM_TETPY (SWALL:P33182) (300 aa) fasta scores: E(): 5e-19, 32.05% id in 287 aa, and to he c-terminal region of Bacteroides fragilis putative phosphoenolpyruvate phosphomutase AepX SWALL:Q9F765 (EMBL:AF285774) (433 aa) fasta scores: E(): 1.7e-55, 52% id in 300 aa | genbank | 52212060 | CAH38067.1 | 303 | 832403 | 833314 | |
| 148843 | hypothetical | BPSS0611 | putative membrane protein Similar to Pseudomonas aeruginosa hypothetical protein pa3325 SWALL:Q9HYS0 (EMBL:AE004754) (295 aa) fasta scores: E(): 1.1e-59, 48.46% id in 293 aa, and to Streptomyces coelicolor hypothetical protein SCO2221 or SC10B7.16 SWALL:Q9KZ16 (EMBL:AL939111) (296 aa) fasta scores: E(): 6.6e-46, 43.86% id in 285 aa. Similar to BPSS1223, 74.150% identity (74.150% ungapped) in 294 aa overlap | genbank | 52212061 | CAH38068.1 | 302 | 833782 | 834690 | |
| 148844 | hypothetical | BPSS0612 | putative oxidoreductase Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa3324 SWALL:Q9HYS1 (EMBL:AE004754) (592 aa) fasta scores: E(): 9.2e-113, 50.42% id in 593 aa, and to Streptomyces coelicolor putative oxidoreductase SCO3954 or SCD78.21c SWALL:Q9ZBX8 (EMBL:AL939118) (585 aa) fasta scores: E(): 4.4e-107, 50.69% id in 578 aa | genbank | 52212062 | CAH38069.1 | 596 | 834728 | 836518 | |
| 148845 | hypothetical | BPSS0613 | conserved hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein pa3323 SWALL:Q9HYS2 (EMBL:AE004754) (291 aa) fasta scores: E(): 2.2e-70, 62.72% id in 279 aa, and to the C-terminal region of Streptomyces coelicolor hypothetical protein SCO3955 or SCD78.22c SWALL:Q9ZBX7 (EMBL:AL939118) (339 aa) fasta scores: E(): 5e-56, 53.65% id in 274 aa | genbank | 52212063 | CAH38070.1 | 295 | 836572 | 837459 | |
| 148846 | hypothetical | BPSS0614 | putative membrane protein Similar to thye C-terminal region of Homo sapiens erythrocyte band 7 integral membrane protein EPB72 or BND7 SWALL:BAN7_HUMAN (SWALL:P27105) (287 aa) fasta scores: E(): 4.9e-39, 48.99% id in 249 aa, and to the full length Ralstonia solanacearum putative stomatin-like transmembrane protein rsc0802 or rs05031 SWALL:Q8Y188 (EMBL:AL646061) (249 aa) fasta scores: E(): 2.3e-66, 76.73% id in 245 aa | genbank | 52212064 | CAH38071.1 | 256 | 837977 | 838747 | |
| 148847 | hypothetical | BPSS0615 | putative membrane protein Similar to Ralstonia solanacearum probable transmembrane protein rsc0803 or rs05027 SWALL:Q8Y187 (EMBL:AL646061) (470 aa) fasta scores: E(): 1.6e-74, 58.71% id in 465 aa, and to Rhizobium meliloti probable membrane protein necessary for nodulation competitiveness NfeD or rb1115 or smb20990 SWALL:Q92UL2 (EMBL:AL603646) (478 aa) fasta scores: E(): 2.6e-56, 47.78% id in 475 aa | genbank | 52212065 | CAH38072.1 | 504 | 838747 | 840261 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 148848 | hypothetical | BPSS0616 | AraC family regulatory protein Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 5.3e-14, 25% id in 332 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0653 or rs05569 SWALL:Q8XS28 (EMBL:AL646080) (387 aa) fasta scores: E(): 5.1e-89, 64.85% id in 350 aa. Possible alternative translational start site | genbank | 52212066 | CAH38073.1 | 375 | 840345 | 841472 | |
| 148849 | hypothetical | BPSS0617 | acyl-CoA dehydrogenase Similar to the C-terminal region of Homo sapiens acyl-CoA dehydrogenase, short-chain specific, mitochondrial precursor ACSDS SWALL:ACDS_HUMAN (SWALL:P16219) (412 aa) fasta scores: E(): 5.4e-64, 48.51% id in 371 aa, and to the full length Ralstonia solanacearum probable acyl-CoA dehydrogenase oxidoreductase protein rsp0652 or rs05570 SWALL:Q8XS29 (EMBL:AL646080) (377 aa) fasta scores: E(): 2.2e-119, 79.57% id in 377 aa | genbank | 52212067 | CAH38074.1 | 377 | 841572 | 842705 | |
| 148850 | hypothetical | BPSS0618 | AMP-binding enzyme Similar to Ralstonia solanacearum probable acetyl-coenzyme A synthetase rsp0651 or rs05571 SWALL:Q8XS30 (EMBL:AL646080) (567 aa) fasta scores: E(): 2.8e-165, 75.22% id in 561 aa, and to Streptomyces coelicolor putative acetyl-coenzyme A synthetase SCO6195 or SC2G5.16 SWALL:Q9Z5A7 (EMBL:AL939126) (558 aa) fasta scores: E(): 1.1e-118, 58.46% id in 561 aa | genbank | 52212068 | CAH38075.1 | 567 | 843109 | 844812 | |
| 148851 | mmsA | hypothetical | BPSS0619 | methylmalonate-semialdehyde dehydrogenase Similar to Pseudomonas aeruginosa methylmalonate-semialdehyde dehydrogenase [acylating] MmsA SWALL:MMSA_PSEAE (SWALL:P28810) (496 aa) fasta scores: E(): 6.6e-114, 58.46% id in 496 aa, and to Ralstonia solanacearum probable methylmalonate-semialdehyde dehydrogenase oxidoreductase protein rsp0650 or rs05572 SWALL:Q8XS31 (EMBL:AL646080) (515 aa) fasta scores: E(): 3.2e-161, 80.86% id in 507 aa | genbank | 52212069 | CAH38076.1 | 509 | 844881 | 846410 |
| 148852 | mmsB | hypothetical | BPSS0620 | 3-hydroxyisobutyrate dehydrogenase Similar to Pseudomonas aeruginosa 3-hydroxyisobutyrate dehydrogenase MmsB SWALL:MMSB_PSEAE (SWALL:P28811) (298 aa) fasta scores: E(): 1.5e-44, 50.33% id in 300 aa, and to Ralstonia solanacearum probable 3-hydroxyisobutyrate dehydrogenase oxidoreductase protein rsp0649 or rs05573 SWALL:Q8XS32 (EMBL:AL646080) (298 aa) fasta scores: E(): 1e-72, 73.89% id in 295 aa | genbank | 52212070 | CAH38077.1 | 298 | 846522 | 847418 |
| 148853 | hypothetical | BPSS0621 | enoyl-CoA hydratase/isomerase family protein Similar to Escherichia coli probable enoyl-CoA hydratase PaaF SWALL:PAAF_ECOLI (SWALL:P76082) (255 aa) fasta scores: E(): 3.9e-22, 37.59% id in 258 aa, and to Ralstonia solanacearum probable enoyl-CoA hydratase protein rsp0648 or rs05574 SWALL:Q8XS33 (EMBL:AL646080) (266 aa) fasta scores: E(): 1.9e-66, 70.42% id in 257 aa | genbank | 52212071 | CAH38078.1 | 264 | 847418 | 848212 | |
| 148854 | hypothetical | BPSS0622 | enoyl-CoA hydratase/isomerase family Similar to Homo sapiens 3-hydroxyisobutyryl-coenzyme A hydrolase SWALL:Q92931 (EMBL:U66669) (381 aa) fasta scores: E(): 3.2e-33, 36.24% id in 367 aa, and to Ralstonia solanacearum putative enoyl-coenzyme A hydratase protein rsp0647 or rs05575 SWALL:Q8XS34 (EMBL:AL646080) (390 aa) fasta scores: E(): 9e-102, 71.77% id in 372 aa | genbank | 52212072 | CAH38079.1 | 382 | 848209 | 849357 | |
| 148855 | hypothetical | BPSS0623 | outer membrane efflux protein Similar to Pseudomonas aeruginosa outer membrane protein OprJ SWALL:OPRJ_PSEAE (SWALL:Q51397) (479 aa) fasta scores: E(): 5.6e-27, 30.22% id in 450 aa, and to Ralstonia solanacearum putative outer membrane multidrug resistance lipoprotein rsc1854 or rs05605 SWALL:Q8XYA8 (EMBL:AL646067) (475 aa) fasta scores: E(): 1.8e-29, 29.55% id in 467 aa | genbank | 52212073 | CAH38080.1 | 460 | 849810 | 851192 | |
| 148856 | macB | hypothetical | BPSS0624 | macrolide-specific ABC-type efflux carrier Similar to Escherichia coli macrolide-specific ABC-type efflux carrier MacB SWALL:MACB_ECOLI (SWALL:P75831) (648 aa) fasta scores: E(): 7.7e-128, 59.35% id in 652 aa, and to Yersinia pestis putative ABC transporter ATP-binding protein ypo1365 SWALL:Q8ZGD7 (EMBL:AJ414148) (649 aa) fasta scores: E(): 9.7e-131, 59.01% id in 649 aa | genbank | 52212074 | CAH38081.1 | 653 | 851202 | 853163 |
| 148857 | hypothetical | BPSS0625 | putative drug-efflux protein Similar to Escherichia coli macrolide-specific efflux protein MacA SWALL:MACA_ECOLI (SWALL:P75830) (371 aa) fasta scores: E(): 3e-34, 43.33% id in 390 aa, and to Pseudomonas syringae putative periplasmic protein SWALL:Q93NK1 (EMBL:AF372703) (389 aa) fasta scores: E(): 9.4e-54, 52.04% id in 367 aa | genbank | 52212075 | CAH38082.1 | 400 | 853166 | 854368 | |
| 148858 | hypothetical | BPSS0626 | luciferase-like monooxygenase Similar to Pseudomonas putida alkanesulfonate monooxygenase SsuD or DsuD SWALL:SSUD_PSEPU (SWALL:O85764) (382 aa) fasta scores: E(): 2.8e-19, 28.99% id in 369 aa, and to Pseudomonas aeruginosa hypothetical protein pa3954 SWALL:Q9HX62 (EMBL:AE004813) (364 aa) fasta scores: E(): 1.9e-115, 79.94% id in 364 aa | genbank | 52212076 | CAH38083.1 | 364 | 854697 | 855791 | |
| 148859 | hypothetical | BPSS0627 | putative ribonuclease Similar to Escherichia coli ribonuclease I precursor Rna or RnsA SWALL:RNI_ECOLI (SWALL:P21338) (268 aa) fasta scores: E(): 4.5e-08, 30.29% id in 241 aa, and to Rhizobium meliloti putative ribonuclease protein r02202 or smc02819 SWALL:Q92NJ8 (EMBL:AL591789) (255 aa) fasta scores: E(): 4.3e-16, 30.17% id in 232 aa | genbank | 52212077 | CAH38084.1 | 240 | 856170 | 856892 | |
| 148860 | glsA | hypothetical | BPSS0628 | thermolabile glutaminase Similar to Rhizobium etli thermolabile glutaminase GlsA SWALL:GLSA_RHIET (SWALL:O87405) (309 aa) fasta scores: E(): 4e-60, 53.44% id in 305 aa, and to Ralstonia solanacearum probable glutaminase A protein rsp1143 or rs05469 SWALL:Q8XQS6 (EMBL:AL646083) (304 aa) fasta scores: E(): 9.9e-96, 78.28% id in 304 aa | genbank | 52212078 | CAH38085.1 | 304 | 857404 | 858318 |
| 148861 | hypothetical | BPSS0629 | putative exported protein No significant database matches | genbank | 52212079 | CAH38086.1 | 102 | 858363 | 858671 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 148862 | hypothetical | BPSS0630 | response regulator protein Similar to Escherichia coli, Salmonella typhimurium, Salmonella typhi and Shigella flexneri transcriptional regulatory protein OmpR SWALL:OMPR_ECOLI (SWALL:P03025) (239 aa) fasta scores: E(): 7.1e-29, 43.53% id in 232 aa, and to Pseudomonas aeruginosa probable two-component response regulator pa1157 SWALL:Q9I4I0 (EMBL:AE004546) (236 aa) fasta scores: E(): 5.4e-43, 54.14% id in 229 aa | genbank | 52212080 | CAH38087.1 | 236 | 858794 | 859504 | |
| 148863 | hypothetical | BPSS0631 | sensor protein No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Escherichia coli sensor protein CpxA or EcfB or Ssd or Eup SWALL:CPXA_ECOLI (SWALL:P08336) (457 aa) fasta scores: E(): 9.9e-15, 31.93% id in 238 aa, and to Pseudomonas aeruginosa probable two-component sensor pa1798 SWALL:Q9I2U4 (EMBL:AE004606) (428 aa) fasta scores: E(): 1.7e-33, 39.17% id in 291 aa. Possible alternative translational start site | genbank | 52212081 | CAH38088.1 | 371 | 859892 | 861007 | |
| 148864 | hypothetical | BPSS0632 | patatin-like phospholipase Similar to Pseudomonas aeruginosa hypothetical protein pa3339 SWALL:Q9HYQ6 (EMBL:AE004756) (728 aa) fasta scores: E(): 6.6e-53, 34.01% id in 729 aa, and to Vibrio cholerae hypothetical protein vc0603 SWALL:Q9KUB9 (EMBL:AE004145) (764 aa) fasta scores: E(): 7.6e-43, 32.18% id in 755 aa. Possible alternative translational start site | genbank | 52212082 | CAH38089.1 | 771 | 861344 | 863659 | |
| 148865 | mreB | hypothetical | BPSS0633 | rod shape-determining protein Similar to Escherichia coli, Salmonella typhimurium, Salmonella typhi, and Shigella flexneri rod shape-determining protein MreB SWALL:MREB_ECOLI (SWALL:P13519) (347 aa) fasta scores: E(): 3.8e-57, 51.43% id in 348 aa, and to Ralstonia solanacearum probable rod shape-determining protein rsc0059 or rs01882 SWALL:Q8Y3C1 (EMBL:AL646057) (347 aa) fasta scores: E(): 3.5e-63, 54.95% id in 333 aa. Similar to BPSL0186, 54.955% identity (54.955% ungapped) in 333 aa overlap | genbank | 52212083 | CAH38090.1 | 354 | 864490 | 865554 |
| 148866 | pseudogene | pseudogene | BPSS0633A | cytochrome c protein (fragment) Probable gene remnant. Similar to the C-terminal regions of Thiobacillus ferrooxidans cytochrome c-552 precursor Cyc1 SWALL:C552_THIFE (SWALL:P74917) (230 aa) fasta scores: E(): 3.1e-07, 47.94% id in 73 aa, and to Ralstonia solanacearum putative cytochrome c signal peptide protein RS00629 SWALL:Q8Y2Y4 (EMBL:AL646058) (206 aa) fasta scores: E(): 1.6e-14, 74.62% id in 67 aa | genbank | 80 | 865609 | 865848 | ||
| 148867 | hypothetical | BPSS0634 | conserved hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein pa1878 SWALL:Q9I2L9 (EMBL:AE004614) (192 aa) fasta scores: E(): 2e-51, 69.84% id in 189 aa, and to Agrobacterium tumefaciens hypothetical protein SWALL:Q9R6H4 (EMBL:AB016260) (222 aa) fasta scores: E(): 8.6e-14, 36.41% id in 184 aa | genbank | 52212084 | CAH38092.1 | 196 | 866105 | 866695 | |
| 148868 | hypothetical | BPSS0635 | conserved hypothetical protein C-terminal region is similar to Rhizobium loti hypothetical protein mll0692 SWALL:Q98M80 (EMBL:AP002995) (660 aa) fasta scores: E(): 1.1e-110, 53.38% id in 665 aa. Full length CDS is similar to Bacillus halodurans hypothetical protein bh3691 SWALL:Q9K6N7 (EMBL:AP001519) (702 aa) fasta scores: E(): 5.2e-74, 35.78% id in 693 aa | genbank | 52212085 | CAH38093.1 | 709 | 867006 | 869135 | |
| 148869 | hypothetical | BPSS0636 | hypothetical protein Poor database matches. Similar to the C-terminal region of Myxococcus xanthus RNA polymerase sigma factor CarQ SWALL:CARQ_MYXXA (SWALL:Q06909) (174 aa) fasta scores: E(): 6.7, 32.91% id in 79 aa | genbank | 52212086 | CAH38094.1 | 87 | 869231 | 869494 | |
| 148870 | pseudogene | pseudogene | BPSS0637 | conserved hypothetical protein (pseudogene) Similar to Streptomyces coelicolor putative lyase SCO5222 or SC7E4.19 SWALL:Q9K499 (EMBL:AL939123) (361 aa) fasta scores: E(): 4.3e-44, 42.35% id in 340 aa, and to Anabaena sp. hypothetical protein alr4685 SWALL:Q8YN85 (EMBL:AP003597) (322 aa) fasta scores: E(): 6.7e-07, 22.75% id in 312 aa CDS contains a frameshifts after codons 2 and 232 | genbank | 113 | 869730 | 870071 | ||
| 148871 | hypothetical | BPSS0639 | glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein Similar to Pseudomonas putida glyoxalase family protein pp3444 SWALL:AAN69046 (EMBL:AE016786) (159 aa) fasta scores: E(): 3.9e-25, 51.92% id in 156 aa, and to Ralstonia solanacearum hypothetical protein rsc0107 or rs00977 SWALL:Q8Y374 (EMBL:AL646057) (159 aa) fasta scores: E(): 2e-24, 47.61% id in 147 aa | genbank | 52212087 | CAH38096.1 | 158 | 871103 | 871579 | |
| 148872 | hypothetical | BPSS0640 | putative glutathione S-transferase Similar to Zea mays glutathione S-transferase III Gst3 SWALL:GTH3_MAIZE (SWALL:P04907) (221 aa) fasta scores: E(): 2e-05, 30.18% id in 212 aa, and to Rhizobium meliloti putative glutathione S-transferase protein r02060 or smc04321 SWALL:Q92NV7 (EMBL:AL591789) (224 aa) fasta scores: E(): 1.3e-36, 48.59% id in 214 aa | genbank | 52212088 | CAH38097.1 | 219 | 871888 | 872547 | |
| 148873 | hypothetical | BPSS0641 | conserved hypothetical protein Similar to Rhizobium meliloti hypothetical protein r02087 or smc01408 SWALL:Q92NT5 (EMBL:AL591789) (236 aa) fasta scores: E(): 4.6e-66, 67.09% id in 234 aa, and to Rhizobium loti hypothetical protein mll2522 SWALL:Q98I82 (EMBL:AP002999) (273 aa) fasta scores: E(): 1.9e-20, 41.42% id in 239 aa | genbank | 52212089 | CAH38098.1 | 236 | 872588 | 873298 | |
| 148874 | hypothetical | BPSS0642 | sensor kinase protein Similar to Escherichia coli sensor protein QseC SWALL:QSEC_ECOLI (SWALL:P40719) (449 aa) fasta scores: E(): 4.6e-27, 32.08% id in 452 aa, and to Ralstonia solanacearum probable transmembrane two-component sensor kinase transcription regulator protein rsp1553 or rs02109 SWALL:Q8XPT4 (EMBL:AL646085) (438 aa) fasta scores: E(): 9.4e-50, 41.34% id in 445 aa | genbank | 52212090 | CAH38099.1 | 459 | 875199 | 876578 | |
| 148875 | hypothetical | BPSS0643 | response regulator protein Similar to Salmonella typhimurium transcriptional regulatory protein BasR or PmrA or ParA SWALL:BASR_SALTY (SWALL:P36556) (222 aa) fasta scores: E(): 1.2e-38, 50.46% id in 214 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc3404 or rs01713 SWALL:Q8XTZ1 (EMBL:AL646075) (221 aa) fasta scores: E(): 1.1e-43, 55% id in 220 aa. Simlar to BPSL0806, self_match.tab 935589:936422 forward MW:3 (278 aa) initn: 837 init1: 837 opt: 839 Z-score: 811.0 bits: 157.5 E(): 1.3e-39 Smith-Waterman score: 839; 59.259% identity (59.259% ungapped) in 216 aa overlap | genbank | 52212091 | CAH38100.1 | 220 | 876575 | 877237 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 148876 | hypothetical | BPSS0644 | putative DNA-binding protein Similar to Rhizobium loti hypothetical protein mlr5989 SWALL:Q98AI2 (EMBL:AP003008) (293 aa) fasta scores: E(): 1.2e-27, 35.12% id in 279 aa, and to Ralstonia solanacearum hypothetical protein rsc0081 or rs02255 SWALL:Q8Y399 (EMBL:AL646057) (300 aa) fasta scores: E(): 3.8e-24, 34.04% id in 282 aa | genbank | 52212092 | CAH38101.1 | 286 | 877398 | 878258 | |
| 148877 | hypothetical | BPSS0645 | hypothetical protein Weakly similar to Salmonella typhi hypothetical protein sty2195 SWALL:Q8Z5Q9 (EMBL:AL627272) (81 aa) fasta scores: E(): 0.066, 38.33% id in 60 aa, and to Escherichia coli hypothetical protein YodC SWALL:YODC_ECOLI (SWALL:P76331) (60 aa) fasta scores: E(): 0.098, 40.74% id in 54 aa | genbank | 52212093 | CAH38102.1 | 89 | 878644 | 878913 | |
| 148878 | hypothetical | BPSS0646 | putative membrane protein C-terminal region is similar to Bacteriophage T4 immunity protein Imm SWALL:IMM_BPT4 (SWALL:P08986) (83 aa) fasta scores: E(): 0.004, 40.35% id in 57 aa, and to Bacteriophage T2 ORF42.1 SWALL:Q38392 (EMBL:Z35073) (83 aa) fasta scores: E(): 0.0055, 36.36% id in 55 aa | genbank | 52212094 | CAH38103.1 | 108 | 879145 | 879471 | |
| 148879 | hypothetical | BPSS0647 | conserved hypothetical protein Similar to Escherichia coli O157:H7 hypothetical protein Z2165 SWALL:Q8X475 (EMBL:AE005351) (131 aa) fasta scores: E(): 9.3e-29, 60.46% id in 129 aa, and to the C-terminal region of Vibrio cholerae hypothetical protein vca1053 SWALL:Q9KKP9 (EMBL:AE004431) (166 aa) fasta scores: E(): 1.8e-29, 62.69% id in 126 aa | genbank | 52212095 | CAH38104.1 | 155 | 879561 | 880028 | |
| 148880 | hypothetical | BPSS0648 | AraC family regulatory protein Similar to Rhizobium loti transcriptional regulator mll3844 SWALL:Q98FC1 (EMBL:AP003002) (332 aa) fasta scores: E(): 4.9e-64, 55.91% id in 313 aa, and to Caulobacter crescentus AraC family transcriptional regulator CC3367 SWALL:Q9A339 (EMBL:AE005998) (324 aa) fasta scores: E(): 3.5e-63, 55.76% id in 312 aa | genbank | 52212096 | CAH38105.1 | 318 | 880135 | 881091 | |
| 148881 | hypothetical | BPSS0649 | hypothetical protein Poor database matches. Weakly similar to Rhizobium etli hypothetical protein SWALL:AAM54839 (EMBL:U80928) (157 aa) fasta scores: E(): 6.4, 28.14% id in 135 aa | genbank | 52212097 | CAH38106.1 | 154 | 881655 | 882119 | |
| 148882 | hypothetical | BPSS0650 | putative peptidase Similar to Xanthomonas axonopodis succinyl-diaminopimelate desuccinylase xac2952 SWALL:AAM37797 (EMBL:AE011937) (497 aa) fasta scores: E(): 6e-105, 56.72% id in 476 aa, and to Xanthomonas campestris succinyl-diaminopimelate desuccinylase xcc2782 SWALL:AAM42054 (EMBL:AE012391) (497 aa) fasta scores: E(): 7.9e-104, 56.51% id in 476 aa | genbank | 52212098 | CAH38107.1 | 483 | 882183 | 883634 | |
| 148883 | hypothetical | BPSS0651 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc0090 or rs02263 SWALL:Q8Y390 (EMBL:AL646057) (152 aa) fasta scores: E(): 3.1e-12, 45.94% id in 111 aa, and to Rhizobium loti hypothetical protein mlr0026 SWALL:Q98NQ9 (EMBL:AP002994) (107 aa) fasta scores: E(): 5e-08, 32.03% id in 103 aa | genbank | 52212099 | CAH38108.1 | 122 | 883744 | 884112 | |
| 148884 | hypothetical | BPSS0652 | putative membrane protein Similar to Rhizobium meliloti putative membrane protein, similar to periplasmic nitrate reductase NnuR rb1123 or smb20997 SWALL:Q92UK4 (EMBL:AL603646) (194 aa) fasta scores: E(): 1e-25, 40.31% id in 191 aa, and to Caulobacter crescentus hypothetical protein CC0706 SWALL:Q9AAA0 (EMBL:AE005745) (188 aa) fasta scores: E(): 3.6e-25, 42.48% id in 193 aa | genbank | 52212100 | CAH38109.1 | 192 | 884644 | 885222 | |
| 148885 | pseudogene | pseudogene | BPSS0652A | putative insertion element protein (fragment) Possible gene remnant. Similar to an internal region of Rhodobacter capsulatus putative insertion element protein SWALL:O68064 (EMBL:AF010496) (191 aa) fasta scores: E(): 1.3, 38.75% id in 80 aa | genbank | 79 | 885526 | 885762 | ||
| 148886 | pseudogene | pseudogene | BPSS0652A | hypothetical protein No significant database matches | genbank | 52212101 | CAH38111.1 | 80 | 886102 | 886344 |
| 148887 | pseudogene | pseudogene | BPSS0653 | transposase (fragment) Probable gene remnant. Similar to the C-terminal regions of Pseudomonas aeruginosa transposase for transposon Tn501 TnpA SWALL:TNP5_PSEAE (SWALL:P06695) (988 aa) fasta scores: E(): 1.4e-08, 47.43% id in 78 aa, and to Pseudomonas putida Tn4653 transposase TnpA SWALL:Q8VMH0 (EMBL:AJ344068) (988 aa) fasta scores: E(): 5.6e-09, 48.68% id in 76 aa | genbank | 37 | 886434 | 886544 | ||
| 148888 | hypothetical | BPSS0654 | family S15 non-peptidase homologue Similar to the C-terminal region of Lactobacillus rhamnosus X-prolyl dipeptidyl aminopeptidase PepX SWALL:Q9RDW6 (EMBL:AJ224996) (797 aa) fasta scores: E(): 1.6e-09, 24.49% id in 641 aa. Internal region is similar an internal region of Lactococcus lactis Xaa-pro dipeptidyl-peptidase PepX SWALL:PEPX_LACLC (SWALL:P22346) (763 aa) fasta scores: E(): 1.1e-08, 29.36% id in 269 aa | genbank | 52212102 | CAH38113.1 | 578 | 886961 | 888697 | |
| 148889 | hypothetical | BPSS0655 | conserved hypothetical protein Similar to Bradyrhizobium japonicum hypothetical protein bll5514 SWALL:BAC50779 (EMBL:AP005955) (520 aa) fasta scores: E(): 2e-18, 30.07% id in 562 aa, and to Caulobacter crescentus hypothetical protein CC3418 SWALL:Q9A2Y8 (EMBL:AE006002) (504 aa) fasta scores: E(): 4.7e-17, 29.55% id in 538 aa | genbank | 52212103 | CAH38114.1 | 554 | 888951 | 890615 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 148890 | hypothetical | BPSS0656 | hypothetical protein No significant database matches | genbank | 52212104 | CAH38115.1 | 125 | 890647 | 891024 | |
| 148891 | pseudogene | pseudogene | BPSS0657 | transposase (fragment) Probable gene remnant. Similar to the C-terminal regions of Burkholderia pseudomallei transposase B SWALL:Q9EZL2 (EMBL:AF287634) (284 aa) fasta scores: E(): 2.2e-07, 41.91% id in 136 aa, and Ralstonia solanacearum ISRSO16-transposase OrfB protein rsp0558 or rs03921 SWALL:Q8XSC0 (EMBL:AL646079) (280 aa) fasta scores: E(): 1.9e-05, 36.84% id in 133 aa | genbank | 74 | 891313 | 891534 | ||
| 148892 | hypothetical | BPSS0658 | putative exported protein No significant database matches | genbank | 52212105 | CAH38117.1 | 676 | 892577 | 894607 | |
| 148893 | hypothetical | BPSS0659 | conserved hypothetical protein Similar to Agrobacterium tumefaciens VirA/G regulated gene VirK SWALL:O50246 (EMBL:AF034769) (144 aa) fasta scores: E(): 1.4e-09, 29.92% id in 137 aa, and to Xanthomonas campestris VirK protein xcc0418 SWALL:Q8PDC2 (EMBL:AE012139) (143 aa) fasta scores: E(): 2.2e-10, 36.05% id in 147 aa | genbank | 52212106 | CAH38118.1 | 144 | 894966 | 895400 | |
| 148894 | pseudogene | pseudogene | BPSS0660 | insertion sequence protein (fragment) Similar to the N-terminal regions of Agrobacterium tumefaciens plasmid pTIBO542, insertion sequence IS1312 Orf1 and Orf2 genes SWALL:Q44320 (EMBL:U19148) (130 aa) fasta scores: E(): 0.89, 24.09% id in 83 aa, and Ralstonia solanacearum ISRSO10-transposase OrfA protein rsc1831 or rs04265 SWALL:Q8XYC7 (EMBL:AL646066) (121 aa) fasta scores: E(): 1.3, 25.3% id in 83 aa | genbank | 93 | 895871 | 896152 | ||
| 148895 | pseudogene | pseudogene | BPSS0661 | putative insertion element protein (pseudogene) Similar to Ralstonia solanacearum ISRso16-transposase orfB protein rsp0558 or rs03921 SWALL:Q8XSC0 (EMBL:AL646079) (280 aa) fasta scores: E(): 1e-14, 32.33% id in 266 aa. C-terminal region is similar to Rhodobacter capsulatus putative insertion element SWALL:O68064 (EMBL:AF010496) (191 aa) fasta scores: E(): 2.1e-47, 66.84% id in 190 aa. Contains a frameshift after codon 191. Possible alternative translational start site | genbank | 81 | 896772 | 897017 | ||
| 148896 | hypothetical | BPSS0663 | putative exported protein Similar to the C-terminal regions of Escherichia coli adhesin AIDA-I SWALL:AIDA_ECOLI (SWALL:Q03155) (1286 aa) fasta scores: E(): 0.62, 29.31% id in 116 aa, and to Pseudomonas aeruginosa probable adhesin pa4082 SWALL:Q9HWU6 (EMBL:AE004824) (1018 aa) fasta scores: E(): 0.16, 27.13% id in 129 aa. Possible gene remnant | genbank | 52212107 | CAH38121.1 | 131 | 897761 | 898156 | |
| 148897 | hypothetical | BPSS0664 | response regulator protein Similar to Escherichia coli and Shigella flexneri transcriptional regulatory protein CpxR SWALL:CPXR_ECOLI (SWALL:P16244) (232 aa) fasta scores: E(): 1.3e-13, 29.53% id in 237 aa, and to Salmonella typhi two-component response regulatory protein sty3812 SWALL:Q8Z2W2 (EMBL:AL627279) (232 aa) fasta scores: E(): 9.6e-14, 29.53% id in 237 aa | genbank | 52212108 | CAH38122.1 | 236 | 898946 | 899656 | |
| 148898 | pseudogene | pseudogene | BPSS0664a | putative response regulator protein (fragment) Similar to the C-terminal region of Pseudomonas aeruginosa probable sensor/response regulator hybrid pa2824 SWALL:Q9I019 (EMBL:AE004709) (786 aa) fasta scores: E(): 4.8e-06, 31.45% id in 124 aa, and to the full length Brucella abortus response regulator DivK SWALL:Q9RHA3 (EMBL:AF051940) (123 aa) fasta scores: E(): 0.0011, 29.06% id in 117 aa | genbank | 40 | 900677 | 900796 | ||
| 148899 | hypothetical | BPSS0665 | putative alpha-ketoglutarate-dependent taurine dioxygenase Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiD SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 4.9e-32, 37.23% id in 282 aa, and to Pseudomonas aeruginosa hypothetical protein pa0193 SWALL:Q9I6U1 (EMBL:AE004457) (300 aa) fasta scores: E(): 2e-61, 54.54% id in 286 aa | genbank | 52212109 | CAH38124.1 | 298 | 901100 | 901996 | |
| 148900 | hypothetical | BPSS0666 | putative collagenase Subfamily M9A unassigned peptidase. C-terminal region is similar to an internal region of Vibrio alginolyticus microbial collagenase precursor SWALL:COLA_VIBAL (SWALL:P43154) (814 aa) fasta scores: E(): 1.8e-54, 32.52% id in 578 aa, and to the C-terminal region of Vibrio parahaemolyticus microbial collagenase precursor PrtVp SWALL:COLA_VIBPA (SWALL:Q56696) (587 aa) fasta scores: E(): 9.3e-48, 33.21% id in 545 aa. Similar to BPSS0827, 81.329% identity (81.458% ungapped) in 632 aa overlap | genbank | 52212110 | CAH38125.1 | 645 | 902357 | 904294 | |
| 148901 | pseudogene | pseudogene | BPSS0667 | acetyltransferase (GNAT) family protein (fragment) Probable gene remnant. No significant database matches to the full length CDS. N-terminal region is similar to Xanthomonas axonopodis hypothetical protein xac2350 SWALL:Q8PK27 (EMBL:AE011872) (151 aa) fasta scores: E(): 1e-19, 48.2% id in 139 aa, and to Ralstonia solanacearum hypothetical protein rsc2436 or rs02667 SWALL:Q8XWN7 (EMBL:AL646070) (165 aa) fasta scores: E(): 6.1e-17, 43.5% id in 154 aa. CDS lacks an appropriate translational start codon. | genbank | 177 | 904497 | 905030 | ||
| 148902 | hypothetical | BPSS0668 | conserved hypothetical protein Similar to Xanthomonas campestris hypothetical protein xcc1648 SWALL:AAM40942 (EMBL:AE012266) (78 aa) fasta scores: E(): 4e-05, 43.54% id in 62 aa, and to an internal region of Pseudomonas aeruginosa hypothetical protein pa3012 SWALL:Q9HZJ4 (EMBL:AE004726) (124 aa) fasta scores: E(): 6.1e-09, 61.01% id in 59 aa | genbank | 52212111 | CAH38127.1 | 72 | 905027 | 905245 | |
| 148903 | hypothetical | BPSS0669 | conserved hypothetical protein Similar to Salmonella typhimurium putative cytoplasmic protein stm0986 SWALL:Q8ZQC1 (EMBL:AE008742) (410 aa) fasta scores: E(): 4.1e-83, 52.03% id in 394 aa, and to Escherichia coli hypothetical protein YcaQ SWALL:YCAQ_ECOLI (SWALL:P75843) (410 aa) fasta scores: E(): 1.1e-82, 51.64% id in 395 aa | genbank | 52212112 | CAH38128.1 | 409 | 905454 | 906683 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 148904 | hypothetical | BPSS0670 | putative transporter protein Similar to Rhizobium loti multidrug efflux protein mll8348 SWALL:Q983F7 (EMBL:AP003013) (473 aa) fasta scores: E(): 1.6e-74, 46.01% id in 452 aa, and to Xanthomonas axonopodis drug resistance translocase xac2494 SWALL:AAM37345 (EMBL:AE011887) (471 aa) fasta scores: E(): 2.5e-64, 43.13% id in 459 aa | genbank | 52212113 | CAH38129.1 | 465 | 907100 | 908497 | |
| 148905 | hypothetical | BPSS0671 | putative trehalase Similar to Escherichia coli periplasmic trehalase precursor TreA or OsmA SWALL:TREA_ECOLI (SWALL:P13482) (565 aa) fasta scores: E(): 7.9e-103, 55.96% id in 495 aa, and to Ralstonia solanacearum probable periplasmic alpha,alpha-trehalase signal peptide protein rsp0277 or rs03687 SWALL:Q8XT38 (EMBL:AL646077) (551 aa) fasta scores: E(): 1.1e-134, 68.56% id in 528 aa. CDS is extended at the N-terminus in comparison to orthologues and lacks an N-terminal signal sequence; the effect on the function of CDS is not known | genbank | 52212114 | CAH38130.1 | 565 | 909175 | 910872 | |
| 148906 | hypothetical | BPSS0672 | putative membrane protein Weakly similar to Pseudomonas putida formate/nitrite transporter family transporter protein PP1156 SWALL:AAN66781 (EMBL:AE016778) (298 aa) fasta scores: E(): 0.11, 22.69% id in 260 aa. Possible alternative translational start site. C-terminal region is similar to the C-terminal region of Similar to Pseudomonas putida putative membrane protein PP1696 SWALL:AAN67317 (EMBL:AE016780) (392 aa) fasta scores: E(): 0.91, 28.19% id in 227 aa. Possible gene remnant | genbank | 52212115 | CAH38131.1 | 270 | 911273 | 912085 | |
| 148907 | hypothetical | BPSS0673 | cytochrome c oxidase subunit III protein Similar to the C-terminal region of Synechocystis sp. cytochrome c oxidase polypeptide III CtaE SWALL:COX3_SYNY3 (SWALL:Q06475) (233 aa) fasta scores: E(): 2.1e-12, 31.79% id in 173 aa, and to the full length Bradyrhizobium japonicum nitric oxide reductase subunit E blr3212 SWALL:BAC48477 (EMBL:AP005946) (191 aa) fasta scores: E(): 2e-21, 39.44% id in 180 aa | genbank | 52212116 | CAH38132.1 | 197 | 912150 | 912743 | |
| 148908 | hypothetical | BPSS0674 | putative membrane protein Similar to Pseudomonas fluorescens NirP protein SWALL:Q9F0X2 (EMBL:AF197466) (81 aa) fasta scores: E(): 3.9, 29.87% id in 77 aa | genbank | 52212117 | CAH38133.1 | 100 | 912765 | 913067 | |
| 148909 | hypothetical | BPSS0675 | GerR family regulatory protein Similar to Burkholderia cepacia genomovar III putative regulatory protein SWALL:Q8VP25 (EMBL:AY028431) (302 aa) fasta scores: E(): 7.8e-78, 66% id in 303 aa. C-terminal region is similar to Pseudomonas aeruginosa transcriptional activator protein LasR SWALL:LASR_PSEAE (SWALL:P25084) (239 aa) fasta scores: E(): 4.6e-05, 25.1% id in 243 aa | genbank | 52212118 | CAH38134.1 | 296 | 913160 | 914050 | |
| 148910 | hypothetical | BPSS0676 | conserved hypothetical protein Similar to Burkholderia cepacia genomovar III putative regulatory protein SWALL:Q8VP24 (EMBL:AY028431) (277 aa) fasta scores: E(): 1.3e-55, 56.27% id in 279 aa. C-terminal region is weakly similar to the C-terminal region of Pseudomonas aeruginosa transcriptional activator protein LasR SWALL:LASR_PSEAE (SWALL:P25084) (239 aa) fasta scores: E(): 6.5, 21.59% id in 213 aa | genbank | 52212119 | CAH38135.1 | 274 | 914574 | 915398 | |
| 148911 | hypothetical | BPSS0677 | putative asparagine synthetase Similar to Burkholderia cepacia genomovar III putative asparagine synthetase SWALL:Q8VP10 (EMBL:AY028431) (656 aa) fasta scores: E(): 6e-206, 74.54% id in 656 aa. N-terminal region is similar to the N-terminal region of Bacillus subtilis asparagine synthetase [glutamine-hydrolyzing] 2 AsnH SWALL:ASNH_BACSU (SWALL:P42113) (747 aa) fasta scores: E(): 4.6e-23, 27.93% id in 605 aa | genbank | 52212120 | CAH38136.1 | 656 | 915616 | 917586 | |
| 148912 | pseudogene | pseudogene | BPSS0678 | response regulator protein (fragment) Probable gene remnant that contains additional sequence at the C-terminus. No significant database matches to the full length CDS. N-terminal region is similar to the C-terminal regions of Ralstonia solanacearum probable two-component system response regulator transcription regulator protein rsc1073 or rs04004 SWALL:Q8Y0H1 (EMBL:AL646062) (237 aa) fasta scores: E(): 1.8e-09, 38.94% id in 95 aa, and Thermoanaerobacter tengcongensis response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain tte0774 SWALL:Q8RBP2 (EMBL:AE013044) (224 aa) fasta scores: E(): 7e-08, 41.41% id in 99 aa | genbank | 158 | 917638 | 918114 | ||
| 148913 | hypothetical | BPSS0679 | putative oxidoreductase beta subunit Similar to Brevundimonas diminuta isoquinoline 1-oxidoreductase beta subunit IorB SWALL:IORB_BREDI (SWALL:Q51698) (781 aa) fasta scores: E(): 4e-14, 34.82% id in 784 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa1880 SWALL:Q9I2L7 (EMBL:AE004614) (731 aa) fasta scores: E(): 0, 79.26% id in 738 aa | genbank | 52212121 | CAH38138.1 | 743 | 918753 | 920984 | |
| 148914 | hypothetical | BPSS0680 | putative oxidoreductase alpha subunit Similar to Brevundimonas diminuta isoquinoline 1-oxidoreductase alpha subunit IorA SWALL:IORA_BREDI (SWALL:Q51697) (152 aa) fasta scores: E(): 5e-32, 58.62% id in 145 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa1881 SWALL:Q9I2L6 (EMBL:AE004614) (153 aa) fasta scores: E(): 1e-50, 84.96% id in 153 aa | genbank | 52212122 | CAH38139.1 | 153 | 920987 | 921448 | |
| 148915 | hypothetical | BPSS0681 | AraC family regulatory protein Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2047 SWALL:Q9I268 (EMBL:AE004631) (329 aa) fasta scores: E(): 1.8e-49, 47.72% id in 329 aa, and weakly similar to Pseudomonas aeruginosa regulatory protein AraC family activator of pyochelin and ferripyochelin receptor synthesis PchR SWALL:PCHR_PSEAE (SWALL:P40883) (296 aa) fasta scores: E(): 7.7e-06, 24.25% id in 301 aa | genbank | 52212123 | CAH38140.1 | 327 | 921649 | 922632 | |
| 148916 | hypothetical | BPSS0682 | conserved hypothetical protein Similar to Vibrio vulnificus conserved hypothetical protein vv12197 SWALL:AAO10581 (EMBL:AE016804) (129 aa) fasta scores: E(): 5.3e-16, 46.15% id in 117 aa, and to Streptomyces coelicolor hypothetical protein SCO4364 or SCD19.19 SWALL:Q9F2Y3 (EMBL:AL939119) (125 aa) fasta scores: E(): 1.5e-09, 38.33% id in 120 aa. Possible alternative translational start sites | genbank | 52212124 | CAH38141.1 | 132 | 922851 | 923249 | |
| 148917 | hypothetical | BPSS0683 | hypothetical protein No significant database matches | genbank | 52212125 | CAH38142.1 | 118 | 923681 | 924037 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 148918 | hypothetical | BPSS0684 | conserved hypothetical protein Similar to Rhodococcus sp. dibenzothiophene desulfurization enzyme C SoxC or DszC SWALL:SOXC_RHOSO (SWALL:P54998) (417 aa) fasta scores: E(): 1.3e-15, 36.09% id in 399 aa, and to Pseudomonas aeruginosa hypothetical protein pa2325 SWALL:Q9I1F3 (EMBL:AE004658) (411 aa) fasta scores: E(): 7.3e-93, 59.46% id in 412 aa. Similar to BPSS0685, 55.721% identity (56.566% ungapped) in 402 aa overlap | genbank | 52212126 | CAH38143.1 | 412 | 924442 | 925680 |