Putative Liprin related protein (L2 gene) (PPFIBP1)

NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:158192 UniGene Hs.172445 Homo sapiens (human) PPFIBP1

Order cDNA clone, Links

Putative Liprin related protein (L2 gene) (PPFIBP1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_003613.2	PTPRF interacting protein binding protein 1 isoform 1	H. sapiens	100.0	1004
XP_001103662.1	PREDICTED: similar to PTPRF interacting protein binding protein 1 isoform 1	M. mulatta	99.6	1004
XP_001475873.1	PREDICTED: similar to mKIAA1230 protein isoform 1	M. musculus	95.9	1003
NP_001087118.1	PTPRF interacting protein, binding protein 2 (liprin beta 2)	X. laevis	82.5	964
NP_001038435.1	hypothetical protein LOC561961	D. rerio	77.9	1012
NP_648661.1	CG10743 CG10743-PA, isoform A	D. melanogaster	47.2	515

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; uncharacterized tissue; embryonic tissue; mixed; thymus; adipose tissue; mammary gland; ovary; muscle; skin; placenta; pancreas; intestine; vascular; umbilical cord; lung; kidney; prostate; eye; stomach; connective tissue; mouth; thyroid; testis; trachea; bladder; amniotic fluid; uterus; epididymis; liver; blood; heart; spinal cord; larynx; bone; bone marrow; ganglia

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	12
Map position:	12p11.23-p11.22
UniSTS entry:		RH92468
UniSTS entry:	Chr Y	D11S3114
UniSTS entry:		SHGC-35957
UniSTS entry:	Chr 12	RH17453

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

AF034802.1	Homo sapiens liprin-beta1 mRNA, complete cds	P
BC046159.1	Homo sapiens, Similar to PTPRF interacting protein, binding protein 1 (liprin beta 1), clone IMAGE:6065417, mRNA, partial cds	PA
AB049149.1	Homo sapiens hSGT2 mRNA, complete cds	PA
NM_177444.1	Homo sapiens PTPRF interacting protein, binding protein 1 (liprin beta 1) (PPFIBP1), transcript variant 2, mRNA	P
BC050281.1	Homo sapiens PTPRF interacting protein, binding protein 1 (liprin beta 1), mRNA (cDNA clone MGC:39493 IMAGE:5276255), complete cds	PA
BX648761.1	Homo sapiens mRNA; cDNA DKFZp686K23123 (from clone DKFZp686K23123)	PA
NM_003622.2	Homo sapiens PTPRF interacting protein, binding protein 1 (liprin beta 1) (PPFIBP1), transcript variant 1, mRNA	P
AB033056.2	Homo sapiens mRNA for KIAA1230 protein, partial cds	P
CR622010.1	full-length cDNA clone CS0DI006YK15 of Placenta Cot 25-normalized of Homo sapiens (human)
AK314350.1	Homo sapiens cDNA, FLJ95114	P
AK294267.1	Homo sapiens cDNA FLJ54647 partial cds, highly similar to Liprin-beta-1	P
BC022873.1	Homo sapiens PTPRF interacting protein, binding protein 1 (liprin beta 1), mRNA (cDNA clone IMAGE:4102924), partial cds	PA
BC001560.1	Homo sapiens PTPRF interacting protein, binding protein 1 (liprin beta 1), mRNA (cDNA clone IMAGE:3453148), with apparent retained intron	PA
AJ276680.1	Homo sapiens partial mRNA for putative Liprin related protein (L2 gene)	P

EST sequences (10 of 228) [Show all sequences]

AI051948.1	Clone IMAGE:1653437	mixed	3' read	P
AI251786.1	Clone IMAGE:1978042	brain	3' read	A
CB164251.1	Clone L17N670205n1-29-D01	liver	5' read	P
AI203416.1	Clone IMAGE:1941879	uncharacterized tissue	3' read	P
AI341605.1	Clone IMAGE:2010014	uncharacterized tissue	3' read	P
R15623.1	Clone G848-F	heart
AI435055.1	Clone IMAGE:2125170	mixed	3' read	P
R50758.1	Clone IMAGE:38616	brain	3' read	A
R50878.1	Clone IMAGE:38616	brain	5' read
AI478372.1	Clone IMAGE:2161061	kidney	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria