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Gasterosteus aculeatus: UniGene Build #5

Lineage: cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Elopocephala; Clupeocephala; Euteleostei; Neognathi; Neoteleostei; Eurypterygii; Ctenosquamata; Acanthomorpha; Euacanthomorpha; Holacanthopterygii; Acanthopterygii; Euacanthopterygii; Percomorpha; Smegmamorpha; Gasterosteiformes; Gasterosteoidei; Gasterosteidae; Gasterosteus; Gasterosteus aculeatus

Sequences Included in UniGene
Known genes are from GenBank 01 Apr 2008
ESTs are from dbEST through 01 Apr 2008

2,321 mRNAs
0 Models
0 HTC
113,615 EST, 3'reads
117,412 EST, 5'reads
1,379 EST, other/unknown

234,727 total sequences in clusters

Build Method: Transcript Based

Alignments between all transcript sequences are used to generate clusters of sequences originating from the same gene.
More...


Final Number of Clusters (sets)

18,938 sets total
2,255 sets contain at least one mRNA
0 sets contain at least one HTC sequence
18,893 sets contain at least one EST
2,210 sets contain both mRNAs and ESTs



Histogram of cluster sizes for UniGene Gac build 5
4097-8192 1
2049-4096 3
1025-2048 4
513-1024 17
257-512 34
129-256 109
65-128 243
33-64 625
17-32 1598
9-16 3197
5-8 4642
3-4 4918
2 1961
1 1586


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