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Entrez CDD Structure Protein Help
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pfam08101: DUF1708 
Domain of unknown function (DUF1708). This is a yeast domain of unknown function.
Statistics
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PSSM-Id: 71536
View PSSM: pfam08101
Aligned: 3 rows
Created: 8-Jan-2008
Updated: 9-Jan-2008
Structure
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Aligned Rows:
pfam08101 is not assigned to any domain superfamily.
Sequence Alignment?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 127338     62 EFEFFHQFSREKVKGVIHVITAELKEKGPDVEFLMIPFRPEQTNDKLLTLLNQLFPLGNGQPVNEKKQLRIVSKADVWTL 141
gi 74609966   45 EFEFFHKFSRGNVRGVIHLITAELKERGTDVEYLMIPLRPEQTNEKLLSFLNQIFPLGNGQPVNEKKQIRVVNKTDVWTL 124
gi 74636941   40 EFEFFHEFQREKVRSLIHLITNELKLNGFETEYLFLPFRPEQTNEKLLSFLNSIFPLGNGQPVADEKIQKILNRTEVWTL 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 127338    142 FQCLKYIWCRLPNSEIIGWKSYLEFKFREEDKKFPRKSFLEIMPQCLASPNHASIVYDFFDLIISISSNSRVNKMSARKI 221
gi 74609966  125 FQALKYIWCRLPDSEVVGWKAYKEFKIREKEKDYPRKSFLEIMPQCLASPNHASIVYDFFDLIVTISSNSKKNKMSARKI 204
gi 74636941  120 FQALKYIWCRLPNGEIIGWAAYNEFKTKEAEQNYSQKSFLEIMPKCLDSPNHASIVYDFFDLIVTMASNSKKNKMSARKI 199
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 127338    222 SKMCAIWAFSKQipNSDIQDYDFESAAMKSfaPNNSIQDGLDQWIPASDAMFHLLLAFLRSFVPQDLESAKLPRTLKSLL 301
gi 74609966  205 SKMCAIWAFNDN--KSSSTDYDFDSSSPQT--VNNSIQNGFDQWIPGSDAMFHLLLAFLRSFVPKDVENAKLPRTLKNLL 280
gi 74636941  200 SKMCAVWAFQMD--QDTATNMIFDARRADT----NDYKQGLSQWIPAAEAMFHLLLAFIRSFVPTDSTKVKLPKSLRNIL 273
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 127338    302 FNNQYPPRKSTAYTSETILTIPLVTLKTDVFSRKPWQLLERCNDLLDFSDHDAFEAREDYALLKSLFRKKNTVEGISRKM 381
gi 74609966  281 FTNEYPPQDSTAFNSETILTIPLVTLHTDEFSRKPWQLLERCNEMLDFSDHEAFEAREDYALLKSLFKKKNNVEGISRKM 360
gi 74636941  274 FDNAYPPKNSDTFTSETILTVPIVTLMTTKFTRKPWQLIERCNELMDFDEPEKFETREDFALLKSLFKKKKNIEGISSKM 353
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 127338    382 SQESRRLMKAMSTKHSTFQPGWAPRECIE--NISHLKECIEVKRLDIDDYFIWTWLSSLSFEQTSEKKKIFGRSIILEFE 459
gi 74609966  361 SQESRRLMKVLSTKHSTFQAGWAPRKALA--NDLGLKSKISVNRLDIDDYFIWTWLSTLSYEETSDKRKIFGRSLILEFE 438
gi 74636941  354 SKESKRLMKCMSTKHSTFQAGWSKGRNLPssNPDLIEESISISRVDIDDYFIWAWLSTLSYEQTSQKRKMFGRSLILEFE 433
                        410
                 ....*....|....
gi 127338    460 FDGFKKWVVFQECD 473
gi 74609966  439 FDGFKKWVVFQESD 452
gi 74636941  434 FDGFKKWLILEECD 447
Citing CDD
Marchler-Bauer A, Anderson JB, Derbyshire MK, DeWeese-Scott C, Gonzales NR, Gwadz M, Hao L, He S, Hurwitz DI, Jackson JD, Ke Z, Krylov D, Lanczycki CJ, Liebert CA, Liu C, Lu F, Lu S, Marchler GH, Mullokandov M, Song JS, Thanki N, Yamashita RA, Yin JJ, Zhang D, Bryant SH. (2007) CDD: a conserved domain database for interactive domain family analysis. Nucleic Acids Res. 35: D237-40
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