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Finding cDNAs
UGID:2725899     UniGene Hs.656581     Homo sapiens (human)   BNC2 Links
CDNA FLJ58607 complete cds, highly similar to Zinc finger protein basonuclin-2 (BNC2)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_520498.2 PREDICTED: hypothetical protein P. troglodytes 100.0 1098
NP_060107.3 basonuclin 2 H. sapiens 100.0 1098
XP_001110467.1 PREDICTED: basonuclin 2 isoform 3 M. mulatta 100.0 1056
NP_766458.2 basonuclin 2 M. musculus 98.7 1048
XP_697231.2 PREDICTED: similar to Zinc finger protein basonuclin-1 D. rerio 61.2 861

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uterus; ovary; embryonic tissue; brain; mixed; uncharacterized tissue; kidney; adrenal gland; intestine; testis; stomach; trachea; thymus; skin; heart; mammary gland; lung; placenta; prostate; mouth; liver; connective tissue; eye; blood; pancreas; muscle; adipose tissue; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9p22.3-p22.2
UniSTS entry: Chr 9 STS-H97910
UniSTS entry: Chr 9 D9S1839
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (24)

BX641030.1 Homo sapiens mRNA; cDNA DKFZp686L04244 (from clone DKFZp686L04244) PA
AY438376.1 Homo sapiens basonuclin2 mRNA, complete cds P
AK000050.1 Homo sapiens cDNA FLJ20043 fis, clone COL00430 PA
AK131398.1 Homo sapiens cDNA FLJ16490 fis, clone CTONG2020411, weakly similar to BASONUCLIN P
NM_017637.5 Homo sapiens basonuclin 2 (BNC2), mRNA P
CR933649.1 Homo sapiens mRNA; cDNA DKFZp686A01127 (from clone DKFZp686A01127) PA
AK025882.1 Homo sapiens cDNA: FLJ22229 fis, clone HRC01802 PA
DQ884948.1 Homo sapiens clone Hubn2AS16 basonuclin 2 (BNC2) mRNA, partial cds, alternatively spliced P
DQ884947.1 Homo sapiens clone Hubn2AS15 basonuclin 2 (BNC2) mRNA, partial cds, alternatively spliced P
DQ884946.1 Homo sapiens clone Hubn2AS14 basonuclin 2 (BNC2) mRNA, partial cds, alternatively spliced P
DQ884945.1 Homo sapiens clone Hubn2AS13 basonuclin 2 (BNC2) mRNA, partial cds, alternatively spliced P
DQ884944.1 Homo sapiens clone Hubn2AS12 basonuclin 2 (BNC2) mRNA, partial cds, alternatively spliced P
DQ884942.1 Homo sapiens clone Hubn2AS10 basonuclin 2 (BNC2) mRNA, partial cds, alternatively spliced
DQ884941.1 Homo sapiens clone Hubn2AS9 basonuclin 2 (BNC2) mRNA, partial cds, alternatively spliced P
DQ884940.1 Homo sapiens clone Hubn2AS8 basonuclin 2 (BNC2) mRNA, partial cds, alternatively spliced P
DQ884939.1 Homo sapiens clone Hubn2AS7 basonuclin 2 (BNC2) mRNA, partial cds, alternatively spliced P
DQ884938.1 Homo sapiens clone Hubn2AS6 basonuclin 2 (BNC2) mRNA, partial cds, alternatively spliced P
DQ884935.1 Homo sapiens clone Hubn2AS3 basonuclin 2 (BNC2) mRNA, 5' UTR, alternatively spliced
DQ884934.1 Homo sapiens clone Hubn2AS2 basonuclin 2 (BNC2) mRNA, partial cds, alternatively spliced P
DQ884933.1 Homo sapiens clone Hubn2AS1 basonuclin 2 (BNC2) mRNA, partial cds, alternatively spliced P
AK092247.1 Homo sapiens cDNA FLJ34928 fis, clone NT2RP7004641, weakly similar to BASONUCLIN P
AK304745.1 Homo sapiens cDNA FLJ58670 complete cds, highly similar to Zinc finger protein basonuclin-2 P
AK299073.1 Homo sapiens cDNA FLJ58607 complete cds, highly similar to Zinc finger protein basonuclin-2 P
BC037160.2 Homo sapiens cDNA clone IMAGE:4298483, containing frame-shift errors PA

EST sequences (164)

AI088362.1 Clone IMAGE:1695561 uterus 3' read
AI097383.1 Clone IMAGE:1698687 uterus 3' read
AI142790.1 Clone IMAGE:1687869 mixed 3' read
BX097723.1 Clone IMAGp998L22592_;_IMAGE:269733 skin
BX106400.1 Clone IMAGp998C16785_;_IMAGE:343623 heart
CB139726.1 Clone L15CKK1-5-A12 liver 5' read P
AI290520.1 Clone IMAGE:1880208 mixed 3' read
AI374822.1 Clone IMAGE:2048616 embryonic tissue 3' read
AI377043.1 Clone IMAGE:2065973 embryonic tissue 3' read
AI378552.1 Clone IMAGE:2069301 mixed 3' read
AI566094.1 Clone IMAGE:2172118 kidney 3' read A
AI767962.1 Clone IMAGE:2401534 kidney 3' read A
AI792819.1 Clone IMAGE:1534492 kidney 5' read PA
AI807978.1 Clone IMAGE:2358446 mixed 3' read
CB268710.1 adipose tissue 5' read
BX281529.1 Clone IMAGp998O238799_;_IMAGE:3644398 ovary P
BX281798.1 Clone IMAGp998G241867_;_IMAGE:759215 embryonic tissue P
AI822010.1 Clone IMAGE:1534492 kidney 3' read A
AI913402.1 Clone IMAGE:2297828 kidney 3' read A
CD000811.1 Clone IMAGE:30321691 mixed 5' read
AI868432.1 Clone IMAGE:2068116 mixed 3' read
AI950453.1 Clone IMAGE:2473275 uncharacterized tissue 3' read A
AI971986.1 Clone IMAGE:2531114 ovary 3' read P
CD359522.1 Clone IMAGE:30386406 testis 5' read
AW024890.1 Clone IMAGE:2527508 kidney 3' read A
AW026869.1 Clone IMAGE:2534095 stomach 3' read A
BX501944.1 Clone DKFZp779P1065 liver 5' read
BX505178.1 Clone DKFZp686P05192 muscle 5' read
BX509588.1 Clone DKFZp686J0131 muscle 3' read
AW051935.1 Clone IMAGE:2544585 kidney 3' read A
AW103818.1 Clone IMAGE:2603500 mixed 3' read A
AW137824.1 Clone IMAGE:2716823 mixed 3' read A
AW188023.1 Clone IMAGE:2664597 mixed 3' read
AW452878.1 Clone IMAGE:3069082 uncharacterized tissue 3' read A
R69412.1 Clone IMAGE:155374 mammary gland 5' read
AW779861.1 Clone IMAGE:3035024 kidney 3' read
CN271583.1 embryonic tissue 5' read P
CN281469.1 embryonic tissue 5' read
CN285303.1 embryonic tissue 5' read
AW956406.1 uncharacterized tissue
CN392047.1 embryonic tissue 5' read P
CN392048.1 embryonic tissue 5' read P
CN430269.1 embryonic tissue 5' read P
CR736405.1 Clone IMAGp998E031165_;_IMAGE:489578 uterus 5' read
BP219997.1 Clone COL00430 intestine 5' read P
BP252695.1 Clone HRC01802 kidney 5' read P
BP289408.1 Clone LNF02071 lung 5' read P
BP376609.1 Clone WMC04377 uterus 5' read P
BP377764.1 Clone WMC08770 uterus 5' read P
CV410667.1 testis
CX787635.1 Clone IMAGE:7483698 embryonic tissue 5' read
AV704597.1 Clone ADBBAH06 adrenal gland 5' read P
BF034765.1 Clone IMAGE:3862477 ovary 5' read
BF365376.1 brain
BF378038.1 testis
BF689893.1 Clone IMAGE:4298483 skin 5' read P
DA028940.1 Clone ASTRO2012809 brain 5' read
DA568027.1 Clone HEMBA1000080 embryonic tissue 5' read
DA621794.1 Clone KIDNE2000819 kidney 5' read
BF855839.1 prostate
AW299661.1 Clone IMAGE:2772281 kidney 3' read
AW300432.1 Clone IMAGE:2774434 kidney 3' read
DA657140.1 Clone MESAN2013012 kidney 5' read P
DA591852.1 Clone HLUNG2014160 lung 5' read
DA406314.1 Clone BRTHA3011520 brain 5' read
BF060684.1 Clone IMAGE:3390733 mixed 3' read A
DA448733.1 Clone CTONG2020411 mouth 5' read P
DA494074.1 Clone FCBBF3006242 brain 5' read P
DA567992.1 Clone HEMBA1000007 embryonic tissue 5' read
DA810972.1 Clone OCBBF3027753 brain 5' read P
DA741685.1 Clone NT2RP7004641 testis 5' read P
BF434099.1 Clone IMAGE:3644353 ovary 3' read
BF434347.1 Clone IMAGE:3644398 ovary 3' read P
BF434970.1 Clone IMAGE:3644814 ovary 3' read
DA808450.1 Clone OCBBF3024377 brain 5' read P
DA711736.1 Clone NT2RI2017682 5' read
DA830166.1 Clone PLACE1004538 placenta 5' read
DA754699.1 Clone NT2RP8000791 testis 5' read P
DA722152.1 Clone NT2RI3002851 testis 5' read P
DA723048.1 Clone NT2RI3004026 testis 5' read P
DA723854.1 Clone NT2RI3005074 testis 5' read P
DA717343.1 Clone NT2RI2025168 5' read
DB341760.1 Clone TESTI4046952 testis 3' read P
DB224176.1 Clone TRACH3015704 trachea 5' read P
DB074330.1 Clone TESTI4017908 testis 5' read P
DB375205.1 Clone PLACE1004538 placenta 3' read
DB273114.1 Clone UTERU2035598 uterus 5' read
DB345359.1 Clone THYMU3014167 thymus 3' read A
DB124785.1 Clone THYMU2034172 thymus 5' read P
DB281578.1 Clone UTERU3008580 uterus 5' read P
DB275247.1 Clone UTERU3000211 uterus 5' read P
DB275333.1 Clone UTERU3000331 uterus 5' read P
DB282126.1 Clone UTERU3009287 uterus 5' read P
DB354447.1 Clone HEMBA1000007 embryonic tissue 3' read
DB354484.1 Clone HEMBA1000080 embryonic tissue 3' read
DB354525.1 Clone HEMBA1000157 embryonic tissue 3' read
DB283608.1 Clone UTERU3011255 uterus 5' read P
DB100273.1 Clone TESTI4052149 testis 5' read P
DB140952.1 Clone THYMU3014167 thymus 5' read
DB291035.1 Clone UTERU3021272 uterus 5' read P
DB324093.1 Clone NT2RI2017682 3' read
DB286707.1 Clone UTERU3015390 uterus 5' read P
DB253550.1 Clone UTERU2008177 uterus 5' read
DB247724.1 Clone UTERU2000363 uterus 5' read
DB143869.1 Clone THYMU3018185 thymus 5' read P
DW455554.1 liver
BG000109.1 placenta
H96311.1 Clone IMAGE:250146 skin 5' read
H96452.1 Clone IMAGE:251202 skin 5' read
H96866.1 Clone IMAGE:251202 skin 3' read
H97075.1 Clone IMAGE:251388 skin 5' read
H97386.1 Clone IMAGE:251197 skin 3' read
H97463.1 Clone IMAGE:251197 skin 5' read
H97910.1 Clone IMAGE:251388 skin 3' read
BF876875.1 lung
DY654349.1 Clone ucsc5_1.3.1.L1.1.A02 mixed P
DY654983.1 Clone ucsc5_1.5.1.L1.1.F02 mixed P
DY654984.1 Clone ucsc5_1.5.1.L1.1.F02 mixed P
N24805.1 Clone IMAGE:269733 skin 3' read
N35803.1 Clone IMAGE:272472 skin 3' read A
BG214531.1 connective tissue P
N62361.1 Clone IMAGE:290512 brain 3' read
BI037693.1 brain P
BI039619.1 brain P
BI010216.1 uncharacterized tissue
N79128.1 Clone IMAGE:290512 brain 5' read
DC369597.1 Clone NT2RI3004530 testis 5' read P
DC423383.1 Clone UTERU3015862 uterus 5' read P
DC422222.1 Clone UTERU3000693 uterus 5' read P
DC422814.1 Clone UTERU3008118 uterus 5' read P
DC423135.1 Clone UTERU3012648 uterus 5' read P
W32812.1 Clone IMAGE:327565 heart 5' read
BM728471.1 Clone UI-E-EJ0-aiu-a-22-0-UI eye 5' read
W69464.1 Clone IMAGE:343623 heart 3' read A
W69548.1 Clone IMAGE:343623 heart 5' read
W70258.1 Clone IMAGE:344036 heart 5' read
W70259.1 Clone IMAGE:344036 heart 3' read
W81477.1 Clone IMAGE:347667 heart 3' read A
W81437.1 Clone IMAGE:347667 heart 5' read
BQ017747.1 Clone IMAGE:5825298 connective tissue 3' read A
AA010984.1 Clone IMAGE:359625 heart 5' read
BG057869.1 Clone IMAGE:4140885 blood 3' read A
AA137062.1 Clone IMAGE:491170 uterus 3' read
AA137133.1 Clone IMAGE:491170 uterus 5' read
BU580892.1 pancreas 5' read
BU732621.1 Clone UI-E-CQ1-afz-m-05-0-UI brain 3' read A
BU742509.1 Clone UI-E-EO1-aiu-a-22-0-UI eye 3' read A
AA235926.1 Clone IMAGE:687968 mixed 5' read
AA236984.1 Clone IMAGE:687966 mixed 3' read
CA433166.1 Clone UI-H-CO0-ark-e-01-0-UI uncharacterized tissue 3' read A
AA313030.1 pancreas 5' read
AA313052.1 pancreas 5' read
AA340709.1 kidney 5' read
AA442712.1 Clone IMAGE:759215 embryonic tissue 5' read P
AA496057.1 Clone IMAGE:759215 embryonic tissue 3' read
AA548559.1 Clone IMAGE:1016927 uncharacterized tissue 3' read
AA574091.1 Clone IMAGE:1056699 mammary gland 3' read A
AA625149.1 Clone IMAGE:1047382 mixed 5' read
AA626284.1 Clone IMAGE:766878 mixed 3' read
AA780150.1 Clone IMAGE:1033832 embryonic tissue 3' read
AA805834.1 Clone IMAGE:1216180 muscle
AA843242.1 Clone IMAGE:1405213 parathyroid 3' read A
R12200.1 Clone IMAGE:25663 brain 5' read
AA918922.1 Clone IMAGE:1534492 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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