| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 144959 | hypothetical | BPSL0197 | putative homoserine O-acetyltransferase Similar to Haemophilus influenzae homoserine O-acetyltransferase MetX or Met2 SWALL:METX_HAEIN (SWALL:P45131) (357 aa) fasta scores: E(): 1.9e-48, 43.22% id in 354 aa, and to Ralstonia solanacearum probable homoserine O-acetyltransferase protein rsc0027 or rs01850 SWALL:Q8Y3F3 (EMBL:AL646057) (403 aa) fasta scores: E(): 4.7e-125, 80% id in 380 aa | genbank | 52208253 | CAH34184.1 | 381 | 204227 | 205372 | |
| 144960 | hypothetical | BPSL0198 | TetR family transcription regulatory protein Similar to Ralstonia solanacearum probable transcription regulator protein rsc0031 or rs01854 SWALL:Q8Y3E9 (EMBL:AL646057) (218 aa) fasta scores: E(): 1.1e-34, 62.27% id in 220 aa, and to Vibrio cholerae TetR family transcriptional regulator VC0214 SWALL:Q9KVD2 (EMBL:AE004111) (210 aa) fasta scores: E(): 3.1e-20, 39.9% id in 218 aa | genbank | 52208254 | CAH34185.1 | 229 | 205721 | 206410 | |
| 144961 | hypothetical | BPSL0199 | haloacid dehalogenase-like hydrolase Poor database matches. C-terminus is similar to the C-terminal region of Ralstonia solanacearum hypothetical protein rsc0032 or rs01855 SWALL:Q8Y3E8 (EMBL:AL646057) (287 aa) fasta scores: E(): 4.3e-40, 55% id in 240 aa. Internal region is similar to the N-terminus of Neisseria meningitidis putative hydrolase NMB0040 SWALL:Q9K1P1 (EMBL:AE002362) (237 aa) fasta scores: E(): 1.9e-14, 36.5% id in 189 aa | genbank | 52208255 | CAH34186.1 | 267 | 206377 | 207180 | |
| 144962 | argB | hypothetical | BPSL0200 | putative acetylglutamate kinase Similar to Corynebacterium glutamicum acetylglutamate kinase ArgB SWALL:ARGB_CORGL (SWALL:Q59281) (294 aa) fasta scores: E(): 2.3e-37, 44.36% id in 275 aa, and to Ralstonia solanacearum acetylglutamate kinase rsc0033 or rs01856 SWALL:ARGB_RALSO (SWALL:Q8Y3E7) (310 aa) fasta scores: E(): 2.3e-88, 83.67% id in 294 aa. CDS is extended at the N-terminus in comparison to the Corynebacterium glutamicum protein, but not when compared other orthologues | genbank | 52208256 | CAH34187.1 | 299 | 207177 | 208076 |
| 144963 | hypothetical | BPSL0201 | sensor kinase protein Two-component regulatory system family, sensor kinase protein. Similar to Rhodobacter sphaeroides sensor histidine kinase RegB or PrrB SWALL:REGB_RHOSH (SWALL:Q53068) (462 aa) fasta scores: E(): 4.6e-22, 30.26% id in 423 aa, and to Ralstonia solanacearum probable transmembrane sensor histidine kinase transcription regulator protein rsc0039 or rs01862 SWALL:Q8Y3E1 (EMBL:AL646057) (448 aa) fasta scores: E(): 2.1e-49, 46.62% id in 429 aa | genbank | 52208257 | CAH34188.1 | 426 | 208670 | 209950 | |
| 144964 | hypothetical | BPSL0202 | response regulator protein Two-component regulatory system family, response regulator protein. Similar to Rhodovulum sulfidophilum photosynthetic apparature regulatory protein RegA SWALL:REGA_RHOSU (SWALL:O82868) (183 aa) fasta scores: E(): 4.4e-24, 46.32% id in 177 aa, and to Pseudomonas aeruginosa probable two-component response regulator pa4493 SWALL:Q9HVS8 (EMBL:AE004863) (186 aa) fasta scores: E(): 7.5e-29, 52.27% id in 176 aa | genbank | 52208258 | CAH34189.1 | 183 | 209961 | 210512 | |
| 144965 | hslU | hypothetical | BPSL0203 | ATP-dependent Hsl protease ATP-binding subunit Similar to Escherichia coli ATP-dependent Hsl protease ATP-binding subunit HslU or HtpI SWALL:HSLU_ECOLI (SWALL:P32168) (443 aa) fasta scores: E(): 2.4e-91, 64.87% id in 447 aa, and to Ralstonia solanacearum ATP-dependent Hsl protease ATP-binding subunit rsc0042 or rs01865 SWALL:HSLU_RALSO (SWALL:Q8Y3D8) (443 aa) fasta scores: E(): 4.6e-110, 78.87% id in 445 aa | genbank | 52208259 | CAH34190.1 | 447 | 210930 | 212273 |
| 144966 | hslV | hypothetical | BPSL0204 | ATP-dependent Hsl protease Similar to Escherichia coli ATP-dependent protease HslV or HtpO SWALL:HSLV_ECOLI (SWALL:P31059) (175 aa) fasta scores: E(): 3.7e-41, 69% id in 171 aa, and to Ralstonia solanacearum ATP-dependent protease rsc0043 or rs01866 SWALL:HSLV_RALSO (SWALL:Q8Y3D7) (178 aa) fasta scores: E(): 7.8e-50, 78.65% id in 178 aa | genbank | 52208260 | CAH34191.1 | 178 | 212283 | 212819 |
| 144967 | hypothetical | BPSL0205 | dksA/traR C4-type zinc finger family protein Similar to Ralstonia solanacearum putative dnaK suppressor protein rsc0046 or rs01869 SWALL:Q8Y3D4 (EMBL:AL646057) (139 aa) fasta scores: E(): 3.6e-41, 86.13% id in 137 aa, and to the C-terminal region of Escherichia coli dnaK suppressor protein DksA SWALL:DKSA_ECOLI (SWALL:P18274) (151 aa) fasta scores: E(): 3.7e-15, 46.21% id in 119 aa | genbank | 52208261 | CAH34192.1 | 138 | 213074 | 213490 | |
| 144968 | hypothetical | BPSL0206 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc0047 or rs01870 SWALL:Q8Y3D3 (EMBL:AL646057) (362 aa) fasta scores: E(): 1.2e-96, 72.57% id in 361 aa. Weakly similar to the N-terminal region of Pseudomonas chlororaphis protein required for the expression of the nitrile hydratase genes SWALL:P47K_PSECL (SWALL:P31521) (419 aa) fasta scores: E(): 9.5e-18, 29.94% id in 354 aa | genbank | 52208262 | CAH34193.1 | 370 | 214040 | 215152 | |
| 144969 | hypothetical | BPSL0207 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc0051 or rs01874 SWALL:Q8Y3C9 (EMBL:AL646057) (397 aa) fasta scores: E(): 2.2e-80, 71.46% id in 424 aa, and to Yersinia pestis hypothetical protein YPO1445 SWALL:Q8ZG67 (EMBL:AJ414148) (396 aa) fasta scores: E(): 3.7e-45, 41.33% id in 421 aa | genbank | 52208263 | CAH34194.1 | 425 | 215294 | 216571 | |
| 144970 | hypothetical | BPSL0208 | integrase/recombinase Similar to Salmonella typhimurium, and Salmonella typhi integrase/recombinase XerD or stm3044 or sty3200 SWALL:XERD_SALTY (SWALL:P55889) (298 aa) fasta scores: E(): 5.3e-26, 35.16% id in 310 aa, and to Ralstonia solanacearum probable site specific integrase/recombinase protein rsc0052 or rs01875 SWALL:Q8Y3C8 (EMBL:AL646057) (329 aa) fasta scores: E(): 4.2e-58, 57.46% id in 315 aa | genbank | 52208264 | CAH34195.1 | 310 | 216660 | 217592 | |
| 144971 | hypothetical | BPSL0209 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc0053 or rs01876 SWALL:Q8Y3C7 (EMBL:AL646057) (237 aa) fasta scores: E(): 1.2e-43, 53.3% id in 242 aa, and to Pseudomonas fluorescens hypothetical protein SWALL:O05323 (EMBL:Y12268) (240 aa) fasta scores: E(): 2.9e-06, 29.15% id in 247 aa | genbank | 52208265 | CAH34196.1 | 245 | 217630 | 218367 | |
| 144972 | dapF | hypothetical | BPSL0210 | diaminopimelate epimerase Similar to Escherichia coli diaminopimelate epimerase DapF SWALL:DAPF_ECOLI (SWALL:P08885) (274 aa) fasta scores: E(): 1.4e-47, 50.52% id in 285 aa, and to Ralstonia solanacearum diaminopimelate epimerase rsc0137 or rs01049 SWALL:DAPF_RALSO (SWALL:Q8Y344) (292 aa) fasta scores: E(): 1.5e-76, 68.85% id in 289 aa | genbank | 52208266 | CAH34197.1 | 289 | 218391 | 219260 |
| 144973 | hypothetical | BPSL0211 | putative lipid A biosynthesis acyltransferase Similar to Escherichia coli lipid A biosynthesis lauroyl acyltransferase HtrB or WaaM SWALL:HTRB_ECOLI (SWALL:P24187) (306 aa) fasta scores: E(): 7.4e-31, 34.7% id in 291 aa, and to Ralstonia solanacearum putative acyltransferase protein rsc0136 or rs01006 SWALL:Q8Y345 (EMBL:AL646057) (297 aa) fasta scores: E(): 5.2e-56, 47.29% id in 296 aa | genbank | 52208267 | CAH34198.1 | 294 | 219301 | 220185 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 144974 | metK | hypothetical | BPSL0212 | S-adenosylmethionine synthetase Similar to Escherichia coli, and Escherichia coli O157:H7 S-adenosylmethionine synthetase MetK or MetX SWALL:METK_ECOLI (SWALL:P04384) (383 aa) fasta scores: E(): 9.8e-98, 69.87% id in 385 aa, and to Ralstonia solanacearum S-adenosylmethionine synthetase rsc0134 or rs01004 SWALL:Q8Y347 (EMBL:AL646057) (396 aa) fasta scores: E(): 9.3e-125, 83.16% id in 392 aa | genbank | 52208268 | CAH34199.1 | 395 | 220451 | 221638 |
| 144975 | hypothetical | BPSL0212A | hypothetical protein No significant database matches. Doubtful CDS | genbank | 52208269 | CAH34200.1 | 117 | 221805 | 222158 | |
| 144976 | hypothetical | BPSL0213 | conserved hypothetical protein Weakly similar to Homo sapiens phytanoyl-CoA dioxygenase, peroxisomal precursor PHYH or PAHX SWALL:PAHX_HUMAN (SWALL:O14832) (338 aa) fasta scores: E(): 3.7e-09, 26.08% id in 253 aa. C-terminal region is similar to Ralstonia solanacearum probable hydroxylase protein rsp0209 or rs06150 SWALL:Q8XTA5 (EMBL:AL646077) (263 aa) fasta scores: E(): 3.9e-44, 47.84% id in 255 aa. Possible alternative translational start site | genbank | 52208270 | CAH34201.1 | 297 | 222402 | 223295 | |
| 144977 | hypothetical | BPSL0214 | hypothetical protein No significant database matches | genbank | 52208271 | CAH34202.1 | 84 | 223564 | 223818 | |
| 144978 | hypothetical | BPSL0215 | aldo/keto reductase family protein Similar to Xanthomonas axonopodis oxidoreductase XAC3199 SWALL:AAM38043 (EMBL:AE011965) (346 aa) fasta scores: E(): 7.6e-104, 77.03% id in 344 aa, and to Mus musculus voltage-gated potassium channel beta-2 subunit KCNAB2 or KCNB3 or CKbeta2 SWALL:KVB2_MOUSE (SWALL:Q64284) (367 aa) fasta scores: E(): 1.2e-30, 35.93% id in 320 aa | genbank | 52208272 | CAH34203.1 | 347 | 223950 | 224993 | |
| 144979 | hypothetical | BPSL0216 | putative membrane protein Poor database matches. Similar to the N-terminal region of Mus musculus 4833420e20rik protein SWALL:Q9CPT9 (EMBL:AK014734) (261 aa) fasta scores: E(): 5.8, 36.92% id in 65 aa, and to C-terminal region of Chlamydia pneumoniae hypothetical protein CPN0211 or CP0554 SWALL:Q9Z8X3 (EMBL:AE001607) (98 aa) fasta scores: E(): 1.4, 35.18% id in 54 aa | genbank | 52208273 | CAH34204.1 | 61 | 225080 | 225265 | |
| 144980 | hypothetical | BPSL0217 | putative membrane protein Similar to Pseudomonas aeruginosa hypothetical protein PA2712 SWALL:Q9I0D0 (EMBL:AE004699) (287 aa) fasta scores: E(): 2.5e-45, 51.94% id in 283 aa, and to Pseudomonas aeruginosa hypothetical protein PA3358 SWALL:Q9HYN8 (EMBL:AE004758) (292 aa) fasta scores: E(): 1.2e-21, 40.2% id in 291 aa | genbank | 52208274 | CAH34205.1 | 287 | 225533 | 226396 | |
| 144981 | hypothetical | BPSL0218 | putative transporter protein Similar to Ralstonia solanacearum putative transporter transmembrane protein rsc3069 or rs00513 SWALL:Q8XUW4 (EMBL:AL646073) (428 aa) fasta scores: E(): 1.5e-80, 57.51% id in 426 aa, and to Pseudomonas aeruginosa probable MFS transporter PA5030 SWALL:Q9HUD9 (EMBL:AE004916) (438 aa) fasta scores: E(): 1.4e-67, 48.79% id in 416 aa | genbank | 52208275 | CAH34206.1 | 429 | 226751 | 228040 | |
| 144982 | hypothetical | BPSL0219 | hypothetical protein No significant database matches | genbank | 52208276 | CAH34207.1 | 70 | 228394 | 228606 | |
| 144983 | hypothetical | BPSL0220 | conserved hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein PA0486 SWALL:Q9I632 (EMBL:AE004486) (324 aa) fasta scores: E(): 3.7e-69, 53.25% id in 323 aa, and to Vibrio cholerae hypothetical protein VC0035 SWALL:Q9KVV4 (EMBL:AE004095) (340 aa) fasta scores: E(): 5.3e-65, 48.77% id in 326 aa | genbank | 52208277 | CAH34208.1 | 343 | 228647 | 229678 | |
| 144984 | pseudogene | pseudogene | BPSL0221 | conserved hypothetical protein (fragment) Probable gene remnant. Similar to the C-terminal regions of Ralstonia solanacearum probable transcription regulator protein rsp0823 or rs05372 SWALL:Q8XRK8 (EMBL:AL646081) (335 aa) fasta scores: E(): 1.2e-06, 63.33% id in 60 aa, and Xanthomonas campestris transcriptional regulator XCC3246 SWALL:AAM42516 (EMBL:AE012442) (289 aa) fasta scores: E(): 1.3, 42.25% id in 71 aa | genbank | 101 | 229949 | 230254 | ||
| 144985 | calB | hypothetical | BPSL0222 | putative coniferyl aldehyde dehydrogenase Similar to Pseudomonas sp. coniferyl aldehyde dehydrogenase CalB SWALL:CALB_PSESP (SWALL:O86447) (480 aa) fasta scores: E(): 4.8e-77, 47.36% id in 475 aa, and to Pseudomonas aeruginosa probable coniferyl aldehyde dehydrogenase PA0366 SWALL:CALB_PSEAE (SWALL:Q9I6C8) (476 aa) fasta scores: E(): 9.8e-91, 53.03% id in 462 aa | genbank | 52208278 | CAH34210.1 | 472 | 230375 | 231793 |
| 144986 | aidB | hypothetical | BPSL0223 | putative acyl-CoA dehydrogenase Similar to Escherichia coli aidB protein SWALL:AIDB_ECOLI (SWALL:P33224) (541 aa) fasta scores: E(): 4.5e-89, 47.49% id in 518 aa. Previously sequenced as Burkholderia pseudomallei putative acyl-CoA dehydrogenase AidB SWALL:Q9ANZ8 (EMBL:AF317886) (554 aa) fasta scores: E(): 0, 99.81% id in 554 aa. Similar to BPSL3386, 60.759% identity (61.993% ungapped) in 553 aa overlap | genbank | 52208279 | CAH34211.1 | 559 | 231828 | 233507 |
| 144987 | hypothetical | BPSL0224 | putative GMC oxidoreductase Similar to Pseudomonas oleovorans alcohol dehydrogenase [acceptor] AlkJ or AlcO SWALL:ALKJ_PSEOL (SWALL:Q00593) (558 aa) fasta scores: E(): 3.4e-98, 48.26% id in 547 aa, and to Rhizobium loti dehydrogenase, polyethylene glycol dehydrogenase, alcohol dehydrogenase, L-sorbose dehydrogenase MLL3225 SWALL:Q98GQ1 (EMBL:AP003001) (535 aa) fasta scores: E(): 3.8e-117, 56.05% id in 537 aa | genbank | 52208280 | CAH34212.1 | 547 | 233741 | 235384 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 144988 | hypothetical | BPSL0225 | putative flagellar hook-length control protein C-terminal region is similar to Salmonella typhimurium flagellar hook-length control protein FliK or FlaE or FlaR SWALL:FLIK_SALTY (SWALL:P26416) (405 aa) fasta scores: E(): 2.5e-13, 32.43% id in 410 aa. Full length CDS is similar to Ralstonia solanacearum probable flagellar hook-length control protein rsp0395 or rs00823 SWALL:Q8XSS2 (EMBL:AL646078) (516 aa) fasta scores: E(): 1.6e-14, 32.62% id in 515 aa | genbank | 52208281 | CAH34213.1 | 469 | 235424 | 236833 | |
| 144989 | fliJ | hypothetical | BPSL0226 | flagellar fliJ protein Similar to Salmonella typhimurium, and Salmonella typhi flagellar fliJ protein FliJ or FlaO or FlaS SWALL:FLIJ_SALTY (SWALL:P26463) (147 aa) fasta scores: E(): 1.9e-09, 32.85% id in 140 aa, and to Burkholderia cepacia putative flagellar chaperone FliJ SWALL:Q8VQP3 (EMBL:AF453480) (152 aa) fasta scores: E(): 1.2e-41, 80% id in 150 aa | genbank | 52208282 | CAH34214.1 | 150 | 236866 | 237318 |
| 144990 | fliI | hypothetical | BPSL0227 | flagellum-specific ATP synthase Similar to Salmonella typhimurium flagellum-specific ATP synthase FliI or FlaC SWALL:FLII_SALTY (SWALL:P26465) (456 aa) fasta scores: E(): 9.9e-107, 69.53% id in 453 aa, and to Burkholderia cepacia flagellar ATPase FliI SWALL:Q8VQP4 (EMBL:AF453480) (501 aa) fasta scores: E(): 2.4e-158, 88.8% id in 509 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translation start site | genbank | 52208283 | CAH34215.1 | 523 | 237324 | 238895 |
| 144991 | fliH | hypothetical | BPSL0228 | flagellar assembly protein Similar to Salmonella typhimurium flagellar assembly protein FliH SWALL:FLIH_SALTY (SWALL:P15934) (235 aa) fasta scores: E(): 4.3e-16, 34.22% id in 225 aa, and to Burkholderia cepacia putative FliI inhibitor FliH SWALL:Q8VQP5 (EMBL:AF453480) (227 aa) fasta scores: E(): 3.4e-58, 78.85% id in 227 aa | genbank | 52208284 | CAH34216.1 | 226 | 238889 | 239569 |
| 144992 | fliG | hypothetical | BPSL0229 | flagellar motor switch protein Similar to Salmonella typhimurium, and Salmonella typhi flagellar motor switch protein FliG SWALL:FLIG_SALTY (SWALL:P15933) (331 aa) fasta scores: E(): 3.1e-65, 58.61% id in 331 aa, and to Burkholderia cepacia flagellar motor/switch protein FliG SWALL:Q8VQP6 (EMBL:AF453480) (331 aa) fasta scores: E(): 1.7e-107, 93.65% id in 331 aa | genbank | 52208285 | CAH34217.1 | 331 | 239562 | 240557 |
| 144993 | fliF | hypothetical | BPSL0230 | flagellar M-ring protein C-terminal region is similar to Salmonella typhimurium flagellar M-ring protein FliF SWALL:FLIF_SALTY (SWALL:P15928) (559 aa) fasta scores: E(): 7e-60, 47.04% id in 559 aa. Full length CDS is similar to Burkholderia cepacia flagellar MS ring protein FliF SWALL:Q8VQP7 (EMBL:AF453480) (587 aa) fasta scores: E(): 6e-148, 82.22% id in 602 aa. CDS is extended at the N-terminus in comparison to many orthologues | genbank | 52208286 | CAH34218.1 | 598 | 240547 | 242343 |
| 144994 | fliE | hypothetical | BPSL0231 | flagellar hook-basal body complex protein Similar to Salmonella typhimurium flagellar hook-basal body complex protein FliE or FlaN SWALL:FLIE_SALTY (SWALL:P26462) (103 aa) fasta scores: E(): 8.5e-10, 43.24% id in 111 aa, and to Burkholderia cepacia flagellar hook-basal body protein FliE SWALL:Q8VQP8 (EMBL:AF453480) (114 aa) fasta scores: E(): 1.4e-27, 82.45% id in 114 aa | genbank | 52208287 | CAH34219.1 | 113 | 242591 | 242932 |
| 144995 | fliS | hypothetical | BPSL0232 | flagellar protein Similar to Salmonella typhimurium flagellar protein FliS SWALL:FLIS_SALTY (SWALL:P26609) (135 aa) fasta scores: E(): 2e-19, 50% id in 132 aa, and to Ralstonia solanacearum probable flagellar protein rsp0384 or rs00812 SWALL:Q8XST3 (EMBL:AL646078) (140 aa) fasta scores: E(): 1.3e-17, 50% id in 136 aa | genbank | 52208288 | CAH34220.1 | 144 | 243065 | 243499 |
| 144996 | hypothetical | BPSL0233 | conserved hypothetical protein Similar to Ralstonia solanacearum probable flagellar protein rsp0385 or rs00813 SWALL:Q8XST2 (EMBL:AL646078) (118 aa) fasta scores: E(): 0.0005, 34.44% id in 90 aa, and to Yersinia pestis fliT protein ypo1839 SWALL:Q8ZF79 (EMBL:AJ414150) (120 aa) fasta scores: E(): 5.6, 24.24% id in 99 aa | genbank | 52208289 | CAH34221.1 | 108 | 243496 | 243822 | |
| 144997 | hypothetical | BPSL0234 | hypothetical protein Poor database matches. Weakly similar to Rhizobium meliloti chemotaxis protein MotD SWALL:MOTD_RHIME (SWALL:Q52964) (475 aa) fasta scores: E(): 0.13, 25.46% id in 483 aa. N-terminal region is weakly similar to Xanthomonas axonopodis hypothetical protein XAC0071 SWALL:AAM34963 (EMBL:AE011630) (346 aa) fasta scores: E(): 0.018, 29.73% id in 333 aa | genbank | 52208290 | CAH34222.1 | 503 | 243932 | 245443 | |
| 144998 | hypothetical | BPSL0235 | putative export system protein Similar to Helicobacter pylori putative member of ABC transporter family AbcB or JHP1483 SWALL:O30551 (EMBL:AF010307) (90 aa) fasta scores: E(): 1.3e-08, 41.46% id in 82 aa, and to the C-terminal region of Escherichia coli flagellar biosynthetic protein FlhB SWALL:FLHB_ECOLI (SWALL:P76299) (382 aa) fasta scores: E(): 9.2e-07, 39.8% id in 103 aa | genbank | 52208291 | CAH34223.1 | 105 | 245440 | 245757 | |
| 144999 | hypothetical | BPSL0236 | putative membrane protein Similar to Ralstonia solanacearum probable transmembrane protein rsc3067 or rs00511 SWALL:Q8XUW6 (EMBL:AL646073) (247 aa) fasta scores: E(): 6.5e-14, 45.7% id in 221 aa, and to Vibrio cholerae hypothetical protein VC0283 SWALL:Q9KV73 (EMBL:AE004116) (225 aa) fasta scores: E(): 1.5e-12, 30.69% id in 215 aa. Lack of similarity at the N-terminus in comparison to other proteins | genbank | 52208292 | CAH34224.1 | 248 | 245950 | 246696 | |
| 145000 | hypothetical | BPSL0237 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc1463 rsc1463 or rs03844 SWALL:Q8XZD8 (EMBL:AL646064) (343 aa) fasta scores: E(): 9.1e-102, 78.59% id in 341 aa, and to Pseudomonas aeruginosa hypothetical protein PA4618 SWALL:Q9HVH3 (EMBL:AE004876) (323 aa) fasta scores: E(): 7.4e-37, 38% id in 321 aa | genbank | 52208293 | CAH34225.1 | 341 | 246793 | 247818 | |
| 145001 | hypothetical | BPSL0238 | putative amino-acid transporter transmembrane protein Similar to Ralstonia solanacearum probable amino-acid transporter transmembrane protein rsc1588 or rs03950 SWALL:Q8XZ18 (EMBL:AL646065) (476 aa) fasta scores: E(): 1.1e-128, 74.83% id in 461 aa, and to Bacillus subtilis hypothetical protein YhdG SWALL:O07576 (EMBL:Y14082) (465 aa) fasta scores: E(): 3.3e-112, 65.43% id in 460 aa | genbank | 52208294 | CAH34226.1 | 467 | 248017 | 249420 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 145002 | hypothetical | BPSL0239 | response regulator protein Two-component regulatory system family, response regulator protein. Similar to Pseudomonas aeruginosa response regulator GacA SWALL:GACA_PSEAE (SWALL:Q51373) (214 aa) fasta scores: E(): 1.1e-24, 38.38% id in 211 aa, and to Ralstonia solanacearum response regulator transcription regulator protein rsc0292 or rs03259 SWALL:Q8Y2P3 (EMBL:AL646058) (210 aa) fasta scores: E(): 4.7e-30, 45.23% id in 210 aa | genbank | 52208295 | CAH34227.1 | 218 | 249662 | 250318 | |
| 145003 | pseudogene | pseudogene | BPSL0240 | sensor kinase protein (fragment) Possible gene remnant. Two-component regulatory system family, sensor kinase protein. Similar to the C-terminal regions of Streptomyces coelicolor putative two component system histidine kinase SCO1369 or SC10A9.11 SWALL:Q9AK93 (EMBL:AL583943) (404 aa) fasta scores: E(): 8.6e-12, 33.33% id in 285 aa, and Deinococcus radiodurans sensor histidine kinase DR0577 SWALL:Q9RWT8 (EMBL:AE001916) (590 aa) fasta scores: E(): 1.1e-10, 34.69% id in 245 aa | genbank | 292 | 250315 | 251193 | ||
| 145004 | fpr | hypothetical | BPSL0241 | ferredoxin--NADP reductase Similar to Azotobacter vinelandii ferredoxin--NADP reductase Fpr SWALL:FENR_AZOVI (SWALL:Q44532) (257 aa) fasta scores: E(): 4.6e-66, 63.67% id in 256 aa, and to Neisseria meningitidis putative ferredoxin--NADP reductase nma1442 or nmb1044 SWALL:Q9JRE3 (EMBL:AL162756) (258 aa) fasta scores: E(): 1.2e-68, 66.92% id in 257 aa. Similar to BPSL2208, 61.328% identity (61.328% ungapped) in 256 aa overlap | genbank | 52208296 | CAH34229.1 | 256 | 251607 | 252377 |
| 145005 | hypothetical | BPSL0242 | LysE type translocator Similar to Escherichia coli threonine efflux protein RhtC SWALL:RHTC_ECOLI (SWALL:P27846) (206 aa) fasta scores: E(): 4.7e-10, 31.5% id in 219 aa, and to Pseudomonas aeruginosa hypothetical protein PA1620 SWALL:Q9I3A2 (EMBL:AE004589) (213 aa) fasta scores: E(): 5.4e-15, 34.41% id in 215 aa | genbank | 52208297 | CAH34230.1 | 217 | 252590 | 253243 | |
| 145006 | hypothetical | BPSL0243 | endonuclease/exonuclease/phosphatase family protein Similar to Salmonella typhimurium putative cytoplasmic protein STM0813 SWALL:Q8ZQP3 (EMBL:AE008733) (252 aa) fasta scores: E(): 2e-15, 32.53% id in 249 aa, and to Pseudomonas aeruginosa hypothetical protein PA2156 SWALL:Q9I1V9 (EMBL:AE004642) (245 aa) fasta scores: E(): 2.3e-15, 33.99% id in 253 aa | genbank | 52208298 | CAH34231.1 | 270 | 253309 | 254121 | |
| 145007 | hypothetical | BPSL0244 | putative exported protein No significant database matches. Possible alternative translational start site | genbank | 52208299 | CAH34232.1 | 187 | 254128 | 254691 | |
| 145008 | hypothetical | BPSL0245 | putative ATPase No significant database matches | genbank | 52208300 | CAH34233.1 | 335 | 255025 | 256032 | |
| 145009 | hypothetical | BPSL0246 | putative FAD dependent oxidoreductase Similar to Agrobacterium tumefaciens dehydrogenase atu2734 or AGR_C_4955 SWALL:Q8UBW6 (EMBL:AE009221) (367 aa) fasta scores: E(): 3.7e-76, 58.51% id in 364 aa, and to Rhizobium loti hypothetical protein MLL4765 SWALL:Q98DC4 (EMBL:AP003004) (370 aa) fasta scores: E(): 5.5e-76, 59.29% id in 366 aa | genbank | 52208301 | CAH34234.1 | 373 | 256104 | 257225 | |
| 145010 | hypothetical | BPSL0247 | putative iron-sulfur protein Similar to Ralstonia solanacearum high potential iron-sulfur protein precursor rsc3086 or rs00538 SWALL:HPIS_RALSO (SWALL:Q8XUU7) (103 aa) fasta scores: E(): 1.3e-14, 50.96% id in 104 aa. -terminal region is similar to Rhodocyclus gelatinosus high potential iron-sulfur protein Hip SWALL:HPIS_RHOGE (SWALL:P00265) (74 aa) fasta scores: E(): 1.3e-11, 54.16% id in 72 aa | genbank | 52208302 | CAH34235.1 | 104 | 257360 | 257674 | |
| 145011 | hypothetical | BPSL0248 | putative transporter protein Similar to Salmonella typhimurium, and Salmonella typhi citrate-proton symporter CitA SWALL:CIT1_SALTY (SWALL:P24115) (434 aa) fasta scores: E(): 3.4e-53, 38.55% id in 428 aa, and to Pseudomonas aeruginosa probable MFS transporter pa4343 SWALL:Q9HW58 (EMBL:AE004850) (439 aa) fasta scores: E(): 9.4e-83, 53.69% id in 406 aa | genbank | 52208303 | CAH34236.1 | 430 | 257907 | 259199 | |
| 145012 | dppA | hypothetical | BPSL0249 | putative periplasmic dipeptide transport protein Similar to Escherichia coli periplasmic dipeptide transport protein precursor DppA SWALL:DPPA_ECOLI (SWALL:P23847) (535 aa) fasta scores: E(): 8.8e-120, 55.29% id in 519 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa4496 SWALL:Q9HVS5 (EMBL:AE004863) (537 aa) fasta scores: E(): 4.6e-148, 66.17% id in 541 aa | genbank | 52208304 | CAH34237.1 | 542 | 259630 | 261258 |
| 145013 | dppB | hypothetical | BPSL0250 | putative dipeptide transport system permease protein Similar to Escherichia coli dipeptide transport system permease protein DppB SWALL:DPPB_ECOLI (SWALL:P37316) (339 aa) fasta scores: E(): 2.7e-85, 65.48% id in 339 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa4503 SWALL:Q9HVR8 (EMBL:AE004864) (336 aa) fasta scores: E(): 5.2e-92, 74.7% id in 336 aa | genbank | 52208305 | CAH34238.1 | 336 | 261370 | 262380 |
| 145014 | dppC | hypothetical | BPSL0251 | putative dipeptide transport system permease protein Similar to Escherichia coli dipeptide transport system permease protein DppC SWALL:DPPC_ECOLI (SWALL:P37315) (300 aa) fasta scores: E(): 2.3e-63, 56.33% id in 300 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa4504 SWALL:Q9HVR7 (EMBL:AE004864) (303 aa) fasta scores: E(): 1.2e-73, 66.77% id in 304 aa | genbank | 52208306 | CAH34239.1 | 305 | 262479 | 263396 |
| 145015 | dppD | hypothetical | BPSL0252 | putative dipeptide transport system ATP-binding protein Similar to Escherichia coli dipeptide transport ATP-binding protein DppD SWALL:DPPD_ECOLI (SWALL:P37314) (327 aa) fasta scores: E(): 1.7e-59, 56.87% id in 320 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa4505 SWALL:Q9HVR6 (EMBL:AE004864) (324 aa) fasta scores: E(): 5e-67, 64.37% id in 320 aa | genbank | 52208307 | CAH34240.1 | 330 | 263398 | 264390 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 145016 | dppF | hypothetical | BPSL0253 | putative dipeptide transport system ATP-binding protein Similar to Escherichia coli dipeptide transport ATP-binding protein DppF or DppE SWALL:DPPF_ECOLI (SWALL:P37313) (334 aa) fasta scores: E(): 3.4e-64, 57.49% id in 327 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC dipeptide transporter pa4506 SWALL:Q9HVR5 (EMBL:AE004864) (323 aa) fasta scores: E(): 1.2e-75, 65.83% id in 319 aa | genbank | 52208308 | CAH34241.1 | 338 | 264387 | 265403 |
| 145017 | hypothetical | BPSL0254 | putative exported protein Weakly similar to Xanthomonas campestris hypothetical protein XCC2296 SWALL:AAM41575 (EMBL:AE012337) (321 aa) fasta scores: E(): 4.6e-12, 29.73% id in 296 aa, and to Brucella melitensis hypothetical exported protein BMEI0146 SWALL:Q8YJE0 (EMBL:AE009457) (286 aa) fasta scores: E(): 2.3e-07, 29.63% id in 270 aa | genbank | 52208309 | CAH34242.1 | 342 | 265516 | 266544 | |
| 145018 | hypothetical | BPSL0255 | putative membrane protein Similar to Ralstonia solanacearum probable transmembrane protein rsc2167 or rs01432 SWALL:Q8XXE7 (EMBL:AL646068) (318 aa) fasta scores: E(): 3e-78, 65.2% id in 319 aa, and to Yersinia pestis putative membrane protein ypo2702 SWALL:Q8ZD87 (EMBL:AJ414153) (339 aa) fasta scores: E(): 3.5e-52, 54.14% id in 338 aa | genbank | 52208310 | CAH34243.1 | 318 | 267022 | 267978 | |
| 145019 | hypothetical | BPSL0256 | putative membrane protein Similar to Ralstonia solanacearum probable transmembrane protein rsc2168 or rs01431 SWALL:Q8XXE6 (EMBL:AL646068) (239 aa) fasta scores: E(): 5.1e-62, 69.45% id in 239 aa, and to Yersinia pestis putative membrane protein ypo2701 SWALL:Q8ZD88 (EMBL:AJ414153) (243 aa) fasta scores: E(): 8.1e-60, 65.41% id in 240 aa | genbank | 52208311 | CAH34244.1 | 250 | 267975 | 268727 | |
| 145020 | hypothetical | BPSL0257 | LamB/YcsF family protein Similar to Ralstonia solanacearum hypothetical protein rsc2169 or rs01430 SWALL:Q8XXE5 (EMBL:AL646068) (247 aa) fasta scores: E(): 7.6e-61, 67.34% id in 245 aa, and to Escherichia coli hypothetical protein YbgL SWALL:YBGL_ECOLI (SWALL:P75746) (244 aa) fasta scores: E(): 2.8e-57, 62.29% id in 244 aa | genbank | 52208312 | CAH34245.1 | 254 | 269350 | 270114 | |
| 145021 | hypothetical | BPSL0258 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc2170 or rs01429 SWALL:Q8XXE4 (EMBL:AL646068) (353 aa) fasta scores: E(): 3.2e-32, 54.44% id in 360 aa, and to an internal region of Saccharomyces cerevisiae urea amidolyase [includes: urea carboxylase; allophanate hydrolase] DUR1,2 SWALL:DUR1_YEAST (SWALL:P32528) (1835 aa) fasta scores: E(): 2.4e-15, 32.19% id in 351 aa | genbank | 52208313 | CAH34246.1 | 359 | 270173 | 271252 | |
| 145022 | hypothetical | BPSL0259 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc2171 or rs01428 SWALL:Q8XXE3 (EMBL:AL646068) (215 aa) fasta scores: E(): 1.5e-50, 63.67% id in 212 aa, and to Salmonella typhimurium putative carboxylase stm0712 SWALL:Q8ZQV8 (EMBL:AE008729) (218 aa) fasta scores: E(): 6.4e-42, 55.18% id in 212 aa | genbank | 52208314 | CAH34247.1 | 218 | 271249 | 271905 | |
| 145023 | hypothetical | BPSL0260 | conserved hypothetical protein Similar to the Ralstonia solanacearum hypothetical protein rsc1721 or rs02911 SWALL:Q8XYN7 (EMBL:AL646066) (188 aa) fasta scores: E(): 2.1e-33, 55.21% id in 163 aa, and Brucella melitensis hypothetical protein BMEII0603 SWALL:Q8YCC9 (EMBL:AE009696) (199 aa) fasta scores: E(): 4.6e-27, 46.62% id in 163 aa. CDS is truncated at the N-terminus is comparison to other orthologues | genbank | 52208315 | CAH34248.1 | 170 | 272055 | 272567 | |
| 145024 | hypothetical | BPSL0261 | 5-formyltetrahydrofolate cyclo-ligase family protein Similar to Ralstonia solanacearum hypothetical protein rsc0089 or rs02262 SWALL:Q8Y391 (EMBL:AL646057) (201 aa) fasta scores: E(): 5.6e-24, 45.55% id in 180 aa, and to Rhizobium loti hypothetical protein mll0364 SWALL:Q98N02 (EMBL:AP002994) (197 aa) fasta scores: E(): 2.6e-16, 35.91% id in 181 aa | genbank | 52208316 | CAH34249.1 | 198 | 272839 | 273435 | |
| 145025 | hypothetical | BPSL0262 | putative transglycosylase Similar to Escherichia coli soluble lytic murein transglycosylase precursor Slt or SltY SWALL:SLT_ECOLI (SWALL:P03810) (645 aa) fasta scores: E(): 5.8e-31, 27.49% id in 662 aa, and to Ralstonia solanacearum probable soluble lytic murein transglycosylase precursor transmembrane protein rsc0088 or rs02278 SWALL:Q8Y392 (EMBL:AL646057) (650 aa) fasta scores: E(): 9.4e-96, 57.01% id in 656 aa | genbank | 52208317 | CAH34250.1 | 651 | 273457 | 275412 | |
| 145026 | hypothetical | BPSL0263 | conserved hypothetical protein Similar to the C-terminal region of Bos taurus NADH-ubiquinone oxidoreductase 39 kDa subunit, mitochondrial precursor NDUFA9 SWALL:NUEM_BOVIN (SWALL:P34943) (380 aa) fasta scores: E(): 7.2e-17, 31.14% id in 305 aa, and to the full length Ralstonia solanacearum putative NADH-ubiquinone oxidoreductase oxidoreductase protein rsc0087 or rs02261 SWALL:Q8Y393 (EMBL:AL646057) (334 aa) fasta scores: E(): 3.6e-40, 47.18% id in 337 aa | genbank | 52208318 | CAH34251.1 | 319 | 275534 | 276493 | |
| 145027 | hypothetical | BPSL0264 | conserved hypothetical protein Similar to Pseudomonas pseudoalcaligenes glutathione S-transferase BphX0 SWALL:Q52037 (EMBL:D85853) (203 aa) fasta scores: E(): 7.5e-05, 30.8% id in 198 aa, and to Ralstonia solanacearum hypothetical protein rsc0086 or rs02260 SWALL:Q8Y394 (EMBL:AL646057) (229 aa) fasta scores: E(): 7.5e-42, 57% id in 207 aa | genbank | 52208319 | CAH34252.1 | 218 | 276548 | 277204 | |
| 145028 | cca | hypothetical | BPSL0265 | tRNA nucleotidyltransferase Similar to Escherichia coli tRNA nucleotidyltransferase Cca SWALL:CCA_ECOLI (SWALL:P06961) (412 aa) fasta scores: E(): 2.3e-77, 53.54% id in 409 aa, and to Ralstonia solanacearum probable tRNA nucleotidyltransferase protein rsc0085 or rs02259 SWALL:Q8Y395 (EMBL:AL646057) (429 aa) fasta scores: E(): 9.4e-114, 73.52% id in 408 aa | genbank | 52208320 | CAH34253.1 | 413 | 277201 | 278442 |
| 145029 | hypothetical | BPSL0266 | conserved hypothetical protein Similar to the N-terminal regions of Xanthomonas axonopodis RebB protein rebB SWALL:AAM37859 (EMBL:AE011943) (97 aa) fasta scores: E(): 1.5e-19, 86.95% id in 69 aa, and to Caedibacter taeniospiralis RebB protein SWALL:Q46365 (EMBL:U04524) (105 aa) fasta scores: E(): 3.2e-06, 46.03% id in 63 aa. C-terminal region of the CDS appears to be either truncated, or divergent in comparison to other proteins | genbank | 52208321 | CAH34254.1 | 73 | 279104 | 279325 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 145030 | hypothetical | BPSL0267 | putative flagella synthesis protein Similar to Proteus mirabilis flagella synthesis protein FlgN SWALL:FLGN_PROMI (SWALL:P96975) (146 aa) fasta scores: E(): 0.078, 24.82% id in 141 aa, and to Yersinia pestis flagella synthesis protein ypo1796 SWALL:Q8ZFC1 (EMBL:AJ414150) (146 aa) fasta scores: E(): 0.00017, 28.67% id in 143 aa | genbank | 52208322 | CAH34255.1 | 146 | 279820 | 280260 | |
| 145031 | hypothetical | BPSL0268 | putative negative regulator of flagellin synthesis Similar to Salmonella typhimurium negative regulator of flagellin synthesis FlgM or FlgR or MviS SWALL:FLGM_SALTY (SWALL:P26477) (97 aa) fasta scores: E(): 0.59, 29.09% id in 110 aa, and to Ralstonia solanacearum probable negative regulator of flagellin synthesis rsp0340 or rs00833 SWALL:Q8XSX7 (EMBL:AL646078) (106 aa) fasta scores: E(): 0.0033, 36.03% id in 111 aa | genbank | 52208323 | CAH34256.1 | 114 | 280340 | 280684 | |
| 145032 | hypothetical | BPSL0269 | putative flagella basal body P-ring formation protein C-terminus is similar to the C-terminal region of Yersinia enterocolitica flagella basal body P-ring formation protein FlgA SWALL:FLGA_YEREN (SWALL:Q56892) (224 aa) fasta scores: E(): 4.7e-15, 40% id in 195 aa. Full length CDS is similar to Ralstonia solanacearum putative flagella basal body P-ring formation protein rsp0341 or rs00720 SWALL:Q8XSX6 (EMBL:AL646078) (295 aa) fasta scores: E(): 8.4e-20, 37.02% id in 289 aa. Possible alternative translational start site | genbank | 52208324 | CAH34257.1 | 307 | 280788 | 281711 | |
| 145033 | hypothetical | BPSL0270 | putative flagellar basal-body rod protein Similar to Salmonella typhimurium flagellar basal-body rod protein FlgB or FlbA SWALL:FLGB_SALTY (SWALL:P16437) (137 aa) fasta scores: E(): 1.3e-06, 42.94% id in 156 aa, and to Yersinia pestis flagellar basal-body rod protein ypo1799 SWALL:Q8ZFB8 (EMBL:AJ414150) (137 aa) fasta scores: E(): 4.5e-08, 45.22% id in 157 aa | genbank | 52208325 | CAH34258.1 | 163 | 282577 | 283068 | |
| 145034 | flgC | hypothetical | BPSL0271 | flagellar basal-body rod protein Similar to Salmonella typhimurium, and Salmonella typhi flagellar basal-body rod protein FlgC or FlaW SWALL:FLGC_SALTY (SWALL:P16438) (134 aa) fasta scores: E(): 1.6e-28, 65.94% id in 138 aa, and to Yersinia pestis flagellar basal-body rod protein ypo1800 SWALL:Q8ZFB7 (EMBL:AJ414150) (134 aa) fasta scores: E(): 5.8e-30, 68.84% id in 138 aa | genbank | 52208326 | CAH34259.1 | 141 | 283152 | 283577 |
| 145035 | hypothetical | BPSL0272 | putative basal-body rod modification protein Similar to Salmonella typhimurium, and Salmonella typhi basal-body rod modification protein FlgD or FlaV SWALL:FLGD_SALTY (SWALL:P16321) (232 aa) fasta scores: E(): 9e-19, 38.28% id in 222 aa, and to Ralstonia solanacearum probable basal-body rod modification protein rsp0344 or rs00744 SWALL:Q8XSX3 (EMBL:AL646078) (221 aa) fasta scores: E(): 2.6e-23, 44.54% id in 229 aa | genbank | 52208327 | CAH34260.1 | 261 | 283697 | 284482 | |
| 145036 | hypothetical | BPSL0273 | putative flagellar hook protein Similar to Salmonella typhimurium, and Salmonella typhi flagellar hook protein FlgE or FlaK SWALL:FLGE_SALTY (SWALL:P16322) (402 aa) fasta scores: E(): 4.3e-39, 42.14% id in 420 aa, and to Xanthomonas axonopodis flagellar biosynthesis hook protein xac1983 SWALL:AAM36845 (EMBL:AE011833) (407 aa) fasta scores: E(): 7.2e-43, 42% id in 419 aa | genbank | 52208328 | CAH34261.1 | 413 | 284510 | 285751 | |
| 145037 | flgF | hypothetical | BPSL0274 | flagellar basal-body rod protein Similar to Salmonella typhimurium flagellar basal-body rod protein FlgF or FlaX SWALL:FLGF_SALTY (SWALL:P16323) (251 aa) fasta scores: E(): 2.1e-40, 53.66% id in 259 aa, and to Escherichia coli flagellar basal-body rod protein FlgF or FlaX SWALL:FLGF_ECOLI (SWALL:P75938) (251 aa) fasta scores: E(): 2.4e-39, 53.28% id in 259 aa | genbank | 52208329 | CAH34262.1 | 253 | 285778 | 286539 |
| 145038 | flgG | hypothetical | BPSL0275 | flagellar basal-body rod protein Similar to Salmonella typhimurium, and Salmonella typhi flagellar basal-body rod protein FlgG or FlaL SWALL:FLGG_SALTY (SWALL:P16439) (260 aa) fasta scores: E(): 5.7e-63, 72.3% id in 260 aa, and to Ralstonia solanacearum probable flagellar basal-body rod protein rsp0347 or rs00748 SWALL:Q8XSX0 (EMBL:AL646078) (260 aa) fasta scores: E(): 9e-64, 72.69% id in 260 aa | genbank | 52208330 | CAH34263.1 | 262 | 286573 | 287361 |
| 145039 | flgH | hypothetical | BPSL0276 | flagellar L-ring protein precursor Similar to Salmonella typhimurium, and Salmonella typhi flagellar L-ring protein precursor FlgH or FlaY SWALL:FLGH_SALTY (SWALL:P15929) (232 aa) fasta scores: E(): 1.2e-36, 58.18% id in 220 aa, and to Escherichia coli, and Escherichia coli O157:H7 flagellar L-ring protein precursor FlgH or FlaY SWALL:FLGH_ECOLI (SWALL:P75940) (232 aa) fasta scores: E(): 3.3e-36, 59.07% id in 215 aa | genbank | 52208331 | CAH34264.1 | 240 | 287382 | 288104 |
| 145040 | flgI | hypothetical | BPSL0277 | flagellar P-ring protein precuror Similar to Salmonella typhimurium flagellar P-ring protein precursor FlgI or FlaM SWALL:FLGI_SALTY (SWALL:P15930) (365 aa) fasta scores: E(): 2.2e-58, 62.66% id in 375 aa, and to Ralstonia solanacearum flagellar P-ring protein precursor rsp0349 or rs00751 SWALL:Q8XSW8 (EMBL:AL646078) (369 aa) fasta scores: E(): 8.6e-64, 63.03% id in 376 aa. Possible alternative translational start site | genbank | 52208332 | CAH34265.1 | 394 | 288119 | 289303 |
| 145041 | hypothetical | BPSL0278 | putative peptidoglycan hydrolase Similar to Salmonella typhimurium peptidoglycan hydrolase FlgJ or FlaZ SWALL:FLGJ_SALTY (SWALL:P15931) (316 aa) fasta scores: E(): 3.5e-32, 43.43% id in 297 aa, and to Vibrio parahaemolyticus peptidoglycan hydrolase FlgJ SWALL:FLGJ_VIBPA (SWALL:Q9X9J3) (308 aa) fasta scores: E(): 6.9e-26, 33.97% id in 312 aa | genbank | 52208333 | CAH34266.1 | 311 | 289304 | 290239 | |
| 145042 | hypothetical | BPSL0279 | conserved hypothetical protein Similar to Escherichia coli hypothetical protein YcgR SWALL:YCGR_ECOLI (SWALL:P76010) (244 aa) fasta scores: E(): 9.3e-24, 33.61% id in 241 aa, and to Yersinia pestis hypothetical protein YPO3220 SWALL:Q8ZC10 (EMBL:AJ414156) (252 aa) fasta scores: E(): 1.8e-23, 32.5% id in 240 aa | genbank | 52208334 | CAH34267.1 | 252 | 290455 | 291213 | |
| 145043 | hypothetical | BPSL0280 | putative flagellar hook-associated protein Similar to Salmonella typhimurium, and Salmonella typhi flagellar hook-associated protein 1 FlgK or FlaS or FlaW SWALL:FLGK_SALTY (SWALL:P15932) (552 aa) fasta scores: E(): 2.9e-39, 32.48% id in 668 aa, and to Ralstonia solanacearum probable flagellar hook-associated protein 1 rsp0351 or rs00754 SWALL:Q8XSW6 (EMBL:AL646078) (642 aa) fasta scores: E(): 9e-50, 41.24% id in 674 aa | genbank | 52208335 | CAH34268.1 | 667 | 291419 | 293422 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 145044 | hypothetical | BPSL0281 | putative flagellar hook-associated protein Similar to Salmonella typhimurium flagellar hook-associated protein 3 FlgL or FlaT or FlaU SWALL:FLGL_SALTY (SWALL:P16326) (317 aa) fasta scores: E(): 3.3e-18, 28.32% id in 406 aa, and to Xanthomonas campestris flagellar protein xcc1942 SWALL:AAM41231 (EMBL:AE012298) (401 aa) fasta scores: E(): 1.3e-22, 33.25% id in 409 aa | genbank | 52208336 | CAH34269.1 | 410 | 293438 | 294670 | |
| 145045 | hypothetical | BPSL0282 | putative permease Similar to Bacillus caldolyticus uracil permease PyrP SWALL:PYRP_BACCL (SWALL:P41006) (432 aa) fasta scores: E(): 1.2e-48, 40.99% id in 422 aa, and to Escherichia coli putative purine permease YcdG SWALL:YCDG_ECOLI (SWALL:P75892) (442 aa) fasta scores: E(): 1.3e-106, 70.25% id in 437 aa | genbank | 52208337 | CAH34270.1 | 435 | 295038 | 296345 | |
| 145046 | hypothetical | BPSL0283 | LysR family regulatory protein Similar to Pseudomonas aeruginosa trpBA operon transcriptional activator TrpI SWALL:TRPI_PSEAE (SWALL:P11720) (295 aa) fasta scores: E(): 1.1e-33, 39.11% id in 294 aa, and to Escherichia coli glycine cleavage system transcriptional activator GcvA SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.5e-33, 35.59% id in 295 aa | genbank | 52208338 | CAH34271.1 | 293 | 296548 | 297429 | |
| 145047 | hypothetical | BPSL0284 | putative chromate transport protein Similar to Ralstonia solanacearum probable transmembrane protein rsc0979 or rs04313 SWALL:Q8Y0R4 (EMBL:AL646062) (193 aa) fasta scores: E(): 9.4e-22, 43.25% id in 178 aa, and to the N-terminal region of Pseudomonas aeruginosa chromate transport protein ChrA SWALL:CHRA_PSEAE (SWALL:P14285) (416 aa) fasta scores: E(): 5e-07, 30.86% id in 162 aa | genbank | 52208339 | CAH34272.1 | 199 | 297527 | 298126 | |
| 145048 | hypothetical | BPSL0285 | putative chromate transporter Similar to Ralstonia solanacearum probable transmembrane protein rsc0980 or rs04384 SWALL:Q8Y0R3 (EMBL:AL646062) (181 aa) fasta scores: E(): 8.1e-20, 36.87% id in 179 aa, and to Bacillus subtilis hypothetical protein YwrA SWALL:O05215 (EMBL:Z93767) (178 aa) fasta scores: E(): 1.7e-10, 29.94% id in 167 aa | genbank | 52208340 | CAH34273.1 | 176 | 298123 | 298653 | |
| 145049 | hypothetical | BPSL0286 | putative membrane protein Poor database matches. Weakly similar to Rhizobium meliloti hypothetical protein SWALL:Q91UP1 (EMBL:AJ304453) (111 aa) fasta scores: E(): 0.085, 25% id in 84 aa | genbank | 52208341 | CAH34274.1 | 112 | 298984 | 299322 | |
| 145050 | hypothetical | BPSL0287 | conserved hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein pa0128 SWALL:Q9I704 (EMBL:AE004450) (113 aa) fasta scores: E(): 1.3e-21, 56.52% id in 115 aa, and to Yersinia pestis hypothetical protein ypo2730 SWALL:Q8ZD62 (EMBL:AJ414153) (113 aa) fasta scores: E(): 2.6e-21, 57.89% id in 114 aa | genbank | 52208342 | CAH34275.1 | 114 | 299436 | 299780 | |
| 145051 | hypothetical | BPSL0288 | putative membrane protein Similar to Listeria monocytogenes hypothetical protein lmo0450 SWALL:Q8Y9S3 (EMBL:AL591975) (221 aa) fasta scores: E(): 5.1e-15, 31.73% id in 208 aa, and to Methanosarcina mazei hypothetical protein MM2287 SWALL:AAM31983 (EMBL:AE013470) (277 aa) fasta scores: E(): 3.5e-20, 37.43% id in 195 aa | genbank | 52208343 | CAH34276.1 | 246 | 299798 | 300538 | |
| 145052 | pseudogene | pseudogene | BPSL0288A | conserved hypothetical protein (pseudogene) Similar to Pseudomonas putida glyoxalase family protein SWALL:Q88H56 (EMBL:AE016787) (125 aa) fasta scores: E(): 5.4e-11, 41.52% id in 118 aa, and to Pseudomonas syringae pv. tomato str. DC3000 hypothetical protein SWALL:Q887D4 (EMBL:AE016860) (131 aa) fasta scores: E(): 1.5e-11, 42.99% id in 107 aa. CDS contains a nonsense mutation (amber) after codon 26, and frameshifts after codons 18, 67 and 91 | genbank | 44 | 300801 | 300935 | ||
| 145053 | hypothetical | BPSL0289 | putative outer membrane porin protein Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 8.1e-14, 29% id in 400 aa, and to Ralstonia solanacearum probable outer membrane porin signal peptide protein rsc3091 or rs00544 SWALL:Q8XUU4 (EMBL:AL646073) (376 aa) fasta scores: E(): 2.7e-40, 42.05% id in 390 aa | genbank | 52208344 | CAH34278.1 | 377 | 301079 | 302212 | |
| 145054 | hypothetical | BPSL0290 | putative exported protein No significant database matches | genbank | 52208345 | CAH34279.1 | 277 | 302370 | 303203 | |
| 145055 | hypothetical | BPSL0291 | putative membrane protein No significant database matches | genbank | 52208346 | CAH34280.1 | 187 | 303251 | 303814 | |
| 145056 | hypothetical | BPSL0292 | putative membrane protein Weakly similar to Chlorobium tepidum hypothetical protein CT1155 SWALL:AAM72388 (EMBL:AE012876) (354 aa) fasta scores: E(): 0.00043, 23.89% id in 318 aa, and Methanopyrus kandleri predicted integral membrane protein MK1387 SWALL:Q8TVK2 (EMBL:AE010432) (327 aa) fasta scores: E(): 0.0039, 23.88% id in 314 aa. CDS is extended athe N-terminus in comparison to other proteins. Possible alternative translational start site | genbank | 52208347 | CAH34281.1 | 356 | 304182 | 305252 | |
| 145057 | hypothetical | BPSL0293 | putative glucosyltransferase No significant database matches to the full length CDS. Internal region is weakly similar to the N-terminal region of Homo sapiens ceramide glucosyltransferase UGCG SWALL:CEGT_HUMAN (SWALL:Q16739) (394 aa) fasta scores: E(): 1.3e-14, 27.58% id in 319 aa. C-terminal region is similar to Synechocystis sp. ceramide glucosyltransferase slr0813 SWALL:P74046 (EMBL:D90911) (389 aa) fasta scores: E(): 3.1e-32, 29.7% id in 377 aa. Possible alternative translational start site | genbank | 52208348 | CAH34282.1 | 422 | 305245 | 306513 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 145058 | hypothetical | BPSL0294 | putative exported protein C-terminal region is similar to Pseudomonas aeruginosa porin B precursor OprB SWALL:PORB_PSEAE (SWALL:Q51485) (454 aa) fasta scores: E(): 3.1e-09, 27.09% id in 465 aa, and to Ralstonia solanacearum putative porin B precursor rsp1632 or rs02190 SWALL:Q8XPK8 (EMBL:AL646086) (456 aa) fasta scores: E(): 4.4e-08, 29.29% id in 471 aa. Possible alternative translational start site | genbank | 52208349 | CAH34283.1 | 509 | 306895 | 308424 |