R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|7484862|pir||T02553 cellulose synthase homolog T26B15.10 - Arabidopsis
thaliana >gi|3298542|gb|AAC25936.1| (AC004681) putative cellulose
synthase [Arabidopsis thaliana]
Length = 755
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): _______
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | || 755
0 150 300 450 600 750
Plus Strand HSPs:
Score = 148 (52.1 bits), Expect = 6.4e-24, Sum P(3) = 6.4e-24
Identities = 24/49 (48%), Positives = 35/49 (71%), Frame = +1
Query: 1 GTLFGKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPKG 147
G K++FRQ L YL++ +W LR +PE+ Y LPAYC+++NS+ PKG
Sbjct: 520 GMFCRKIRFRQSLAYLYVFSWGLRSIPELFYCLLPAYCLLHNSALFPKG 568
Score = 114 (40.1 bits), Expect = 6.4e-24, Sum P(3) = 6.4e-24
Identities = 30/87 (34%), Positives = 46/87 (52%), Frame = +2
Query: 140 PRELGQWIPATLLVIYNVSTLLENLKIGLSIRTWCNNQRMARXTTMNSWFFGFLAILLKR 319
P+ + I TL+ I+ + TL E + +G SI++W Q R T SW F L ++LK
Sbjct: 566 PKGVYLGIIITLVGIHCLYTLWEFMNLGFSIQSWYVTQSFGRIKTTCSWLFSVLDVILKL 625
Query: 320 LRISNIGFEITRKD--EXFSNEGANEN 394
L IS F +T+K E S G+ ++
Sbjct: 626 LGISKTVFIVTKKTMPETKSGSGSKKS 652
Score = 80 (28.2 bits), Expect = 6.4e-24, Sum P(3) = 6.4e-24
Identities = 24/62 (38%), Positives = 32/62 (51%), Frame = +3
Query: 402 RFIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCXTYLVVLLLA 581
+F F+ S F+PGT I+L+ L AL +G Q G GSG+ C LVV+L
Sbjct: 665 KFEFDGSLYFLPGTFIVLVNLAALAGCLVGLQ---SRGGGGSGLAEA--CGCILVVILFL 719
Query: 582 IF 587
F
Sbjct: 720 PF 721
>gi|7484865|pir||T02552 cellulose synthase homolog T26B15.9 - Arabidopsis
thaliana >gi|3298541|gb|AAC25935.1| (AC004681) putative cellulose
synthase [Arabidopsis thaliana]
Length = 712
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): _______
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 712
0 150 300 450 600
Plus Strand HSPs:
Score = 151 (53.2 bits), Expect = 3.3e-23, Sum P(3) = 3.3e-23
Identities = 25/49 (51%), Positives = 35/49 (71%), Frame = +1
Query: 1 GTLFGKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPKG 147
G K++FRQ L YL+I TW LR +PE+ Y LPAYC+++N++ PKG
Sbjct: 477 GMFCRKIRFRQSLAYLYIFTWGLRSIPELIYCLLPAYCLLHNAALFPKG 525
Score = 101 (35.6 bits), Expect = 3.3e-23, Sum P(3) = 3.3e-23
Identities = 26/87 (29%), Positives = 46/87 (52%), Frame = +2
Query: 140 PRELGQWIPATLLVIYNVSTLLENLKIGLSIRTWCNNQRMARXTTMNSWFFGFLAILLKR 319
P+ + I TL+ ++ + +L E + +G S+++W +Q R T SW F I+LK
Sbjct: 523 PKGVYLGIVVTLVGMHCLYSLWEFMSLGFSVQSWFASQSFWRIKTTCSWLFSIPDIILKL 582
Query: 320 LRISNIGFEITRKD--EXFSNEGANEN 394
L IS F +T+K + S G+ ++
Sbjct: 583 LGISKTVFIVTKKTMPKTMSGSGSEKS 609
Score = 82 (28.9 bits), Expect = 3.3e-23, Sum P(3) = 3.3e-23
Identities = 25/62 (40%), Positives = 33/62 (53%), Frame = +3
Query: 402 RFIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCXTYLVVLLLA 581
+F F+ S F+PGT ILL+ L AL +G Q + G GSG+ C LVV+L
Sbjct: 622 KFEFDGSLYFLPGTFILLVNLAALAGCSVGLQ---RHRGGGSGLAEA--CGCILVVILFL 676
Query: 582 IF 587
F
Sbjct: 677 PF 678
>gi|7484863|pir||T02560 cellulose synthase homolog T26B15.17 - Arabidopsis
thaliana >gi|3298549|gb|AAC25943.1| (AC004681) putative cellulose
synthase [Arabidopsis thaliana]
Length = 748
Frame 3 hits (HSPs): __ _____
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 748
0 150 300 450 600
Plus Strand HSPs:
Score = 128 (45.1 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 26/47 (55%), Positives = 34/47 (72%), Frame = +1
Query: 7 LFGK-LQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPKG 147
LF K ++FRQ L YL I T LR +PE+ Y LPAYC+++NS+ PKG
Sbjct: 513 LFSKKIRFRQRLAYLCIIT-CLRSIPELIYCLLPAYCLLHNSTLFPKG 559
Score = 111 (39.1 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 27/73 (36%), Positives = 40/73 (54%), Frame = +2
Query: 140 PRELGQWIPATLLVIYNVSTLLENLKIGLSIRTWCNNQRMARXTTMNSWFFGFLAILLKR 319
P+ L I TL+ I+ + TL E + +G S+++W +Q + R +SW F I LK
Sbjct: 557 PKGLYLGITVTLVGIHCLYTLWEFMSLGYSVQSWLVSQSVWRIVATSSWLFSIFDITLKL 616
Query: 320 LRISNIGFEITRK 358
L IS F IT+K
Sbjct: 617 LGISETVFIITKK 629
Score = 80 (28.2 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 22/64 (34%), Positives = 34/64 (53%), Frame = +3
Query: 396 MVRFIFNKSPVFIPGTTILLIQLTALVTMWLGWQ-PPVXNNGHGSGVWGKLFCXTYLVVL 572
+ +F F+ S F+PGT I+L+ + AL +G Q + G GSG+ C LV++
Sbjct: 654 LFKFEFDGSLCFLPGTFIVLVNIAALAVFSVGLQRSSYSHEGGGSGLAEA--CGCVLVMM 711
Query: 573 LLAIF 587
L F
Sbjct: 712 LFLPF 716
Score = 38 (13.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 6/16 (37%), Positives = 10/16 (62%), Frame = +3
Query: 438 GTTILLIQLTALVTMW 485
G T+ L+ + L T+W
Sbjct: 563 GITVTLVGIHCLYTLW 578
>gi|7484864|pir||T02561 cellulose synthase homolog T26B15.18 - Arabidopsis
thaliana >gi|3298550|gb|AAC25944.1| (AC004681) putative cellulose
synthase [Arabidopsis thaliana]
Length = 757
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): ________
Frame 1 hits (HSPs): ____ ___
__________________________________________________
Database sequence: | | | | | || 757
0 150 300 450 600 750
Plus Strand HSPs:
Score = 119 (41.9 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 22/49 (44%), Positives = 33/49 (67%), Frame = +1
Query: 1 GTLFGKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPKG 147
G KL+FRQ + YL ++ +R +PE+ Y LPAYC+++NS+ PKG
Sbjct: 520 GLFCRKLRFRQRVAYLCVSI-CVRSIPELIYCLLPAYCLLHNSALFPKG 567
Score = 91 (32.0 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 23/59 (38%), Positives = 34/59 (57%), Frame = +3
Query: 411 FNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCXTYLVVLLLAIF 587
F+ S F+PGT I+L+ L ALV +++G Q ++G G G+ C LVV+L F
Sbjct: 666 FDGSLYFLPGTFIVLVNLAALVGVFVGLQRSSYSHGGGGSGLGEA-CACILVVMLFFPF 723
Score = 90 (31.7 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 29/94 (30%), Positives = 45/94 (47%), Frame = +2
Query: 140 PRELGQWIPATLLVIYNVSTLLENLKIGLSIRTWCNNQRMARXTTMNSWFFGFLAILLKR 319
P+ L I L ++ + TL E + +G SI++W +Q R +SW F I+LK
Sbjct: 565 PKGLCLGITMLLAGMHCLYTLWEFMCLGHSIQSWYVSQSFWRIVATSSWLFSIFDIILKL 624
Query: 320 LRISNIGFEITRKD---EXFSNEGAN----ENDG 400
L +S F +++K E S G E+DG
Sbjct: 625 LGLSKNVFLVSKKTMPVETMSGSGIGPSQREDDG 658
Score = 49 (17.2 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 10/22 (45%), Positives = 15/22 (68%), Frame = +1
Query: 535 GENCSVXHIWLCCYWPFLKGLF 600
GE C+ + + ++PFLKGLF
Sbjct: 708 GEACACILV-VMLFFPFLKGLF 728
Score = 38 (13.4 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 8/29 (27%), Positives = 16/29 (55%), Frame = +2
Query: 326 ISNIGFEITRKDEXFSNEGANENDG*IHF 412
+S G +++++ N G E DG ++F
Sbjct: 644 MSGSGIGPSQREDDGPNSGKTEFDGSLYF 672
>gi|7485046|pir||B71417 hypothetical protein - Arabidopsis thaliana
>gi|2244887|emb|CAB10308.1| (Z97338) cellulose synthase like
protein [Arabidopsis thaliana] >gi|7268276|emb|CAB78571.1|
(AL161541) cellulose synthase like protein [Arabidopsis thaliana]
Length = 710
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): ___
Frame 1 hits (HSPs): ____ _
__________________________________________________
Database sequence: | | | | | | 710
0 150 300 450 600
Plus Strand HSPs:
Score = 131 (46.1 bits), Expect = 9.4e-15, Sum P(4) = 9.4e-15
Identities = 23/49 (46%), Positives = 32/49 (65%), Frame = +1
Query: 1 GTLFGKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPKG 147
G GK++FRQ L Y W LR +PE+ Y LPAYC++++S+ PKG
Sbjct: 486 GMFHGKIKFRQRLAYFW-ALMCLRSIPELIYCLLPAYCLLHDSALFPKG 533
Score = 82 (28.9 bits), Expect = 9.4e-15, Sum P(4) = 9.4e-15
Identities = 24/62 (38%), Positives = 33/62 (53%), Frame = +3
Query: 402 RFIFNKSPVFIPGTTILLIQLTALVTMWLGWQ-PPVXNNGHGSGVWGKLFCXTYLVVLLL 578
+F F+ S +FIPGT I+L+ L AL + Q + G GSG+ C LVV+L
Sbjct: 616 KFEFDSSGLFIPGTFIMLVNLAALAGYLVRLQRSSCSHGGGGSGLAEA--CGCILVVMLF 673
Query: 579 AIF 587
F
Sbjct: 674 LPF 676
Score = 62 (21.8 bits), Expect = 9.4e-15, Sum P(4) = 9.4e-15
Identities = 13/30 (43%), Positives = 17/30 (56%), Frame = +2
Query: 269 TTMNSWFFGFLAILLKRLRISNIGFEITRK 358
+ + W F I+LK L IS IGF I +K
Sbjct: 560 SVQSCWLFSIQDIILKLLGISQIGFVIAKK 589
Score = 39 (13.7 bits), Expect = 9.4e-15, Sum P(4) = 9.4e-15
Identities = 7/9 (77%), Positives = 8/9 (88%), Frame = +1
Query: 574 YWPFLKGLF 600
+ PFLKGLF
Sbjct: 673 FLPFLKGLF 681
>gi|7485121|pir||E71417 hypothetical protein - Arabidopsis thaliana
>gi|2244890|emb|CAB10311.1| (Z97338) cellulose synthase like
protein [Arabidopsis thaliana] >gi|7268279|emb|CAB78574.1|
(AL161541) cellulose synthase like protein [Arabidopsis thaliana]
Length = 828
Frame 2 hits (HSPs): __
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | | 828
0 150 300 450 600 750
Plus Strand HSPs:
Score = 132 (46.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 22/44 (50%), Positives = 31/44 (70%), Frame = +1
Query: 16 KLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPKG 147
K++FRQ L Y W+ +R +PE+ Y LPAYC++NNS+ PKG
Sbjct: 612 KIKFRQRLAYFWVLM-CIRSIPELVYCLLPAYCLLNNSALFPKG 654
Score = 60 (21.1 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 12/26 (46%), Positives = 16/26 (61%), Frame = +2
Query: 284 WFFGFLAILLKRLRISNIGFEITRKD 361
W F I+LK L IS IGF + +K+
Sbjct: 686 WLFSIQDIILKLLGISKIGFIVAKKN 711
>gi|7487589|pir||T08920 hypothetical protein T32A16.180 - Arabidopsis thaliana
>gi|4972105|emb|CAB43901.1| (AL078468) putative protein
[Arabidopsis thaliana] >gi|7269250|emb|CAB81319.1| (AL161560)
putative protein [Arabidopsis thaliana]
Length = 727
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _______
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | 727
0 150 300 450 600
Plus Strand HSPs:
Score = 114 (40.1 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 29/88 (32%), Positives = 46/88 (52%), Frame = +2
Query: 104 LPIASLITPVSC-PRELGQWIPATLLVIYNV--STLLENLKIGLSIRTWCNNQRMARXTT 274
LP +LI+ VS P+ W +++ + L + L G + R W N+QRM
Sbjct: 505 LPQLALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDFLLEGGTYRKWWNDQRMLMIKG 564
Query: 275 MNSWFFGFLAILLKRLRISNIGFEITRK 358
++S+FFGF+ +LK L +S F +T K
Sbjct: 565 LSSFFFGFIEFILKTLNLSTPKFNVTSK 592
Score = 45 (15.8 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 21/66 (31%), Positives = 34/66 (51%), Frame = +3
Query: 384 QMKMMVRFIFN---KSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCX 554
Q K + IF+ S +F+P TT+ ++ L A V W G++G LFC
Sbjct: 599 QRKRYEQEIFDFGTSSSMFLPLTTVAIVNLLAFV--W--------------GLYGILFCG 642
Query: 555 --TYLVVLLLA 581
YL ++L++
Sbjct: 643 GELYLELMLVS 653
Score = 44 (15.5 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 14/29 (48%), Positives = 16/29 (55%), Frame = +1
Query: 37 LGYLWITTWSLR--PVPEI-C---YAALP 105
L ++W TT SLR PV C YAA P
Sbjct: 67 LAFMWATTTSLRLNPVHRTECPEKYAAKP 95
>gi|2262114|gb|AAB63622.1| (AC002343) cellulose synthase isolog [Arabidopsis
thaliana]
Length = 770
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): _______
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | 770
0 150 300 450 600 750
Plus Strand HSPs:
Score = 114 (40.1 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 29/88 (32%), Positives = 46/88 (52%), Frame = +2
Query: 104 LPIASLITPVSC-PRELGQWIPATLLVIYNV--STLLENLKIGLSIRTWCNNQRMARXTT 274
LP +LI+ VS P+ W +++ + L + L G + R W N+QRM
Sbjct: 548 LPQLALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDFLLEGGTYRKWWNDQRMLMIKG 607
Query: 275 MNSWFFGFLAILLKRLRISNIGFEITRK 358
++S+FFGF+ +LK L +S F +T K
Sbjct: 608 LSSFFFGFIEFILKTLNLSTPKFNVTSK 635
Score = 45 (15.8 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 21/66 (31%), Positives = 34/66 (51%), Frame = +3
Query: 384 QMKMMVRFIFN---KSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCX 554
Q K + IF+ S +F+P TT+ ++ L A V W G++G LFC
Sbjct: 642 QRKRYEQEIFDFGTSSSMFLPLTTVAIVNLLAFV--W--------------GLYGILFCG 685
Query: 555 --TYLVVLLLA 581
YL ++L++
Sbjct: 686 GELYLELMLVS 696
Score = 44 (15.5 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 14/29 (48%), Positives = 16/29 (55%), Frame = +1
Query: 37 LGYLWITTWSLR--PVPEI-C---YAALP 105
L ++W TT SLR PV C YAA P
Sbjct: 67 LAFMWATTTSLRLNPVHRTECPEKYAAKP 95
>gi|7487588|pir||T08919 hypothetical protein T32A16.170 - Arabidopsis thaliana
>gi|4972104|emb|CAB43900.1| (AL078468) putative protein
[Arabidopsis thaliana] >gi|7269249|emb|CAB81318.1| (AL161560)
putative protein [Arabidopsis thaliana]
Length = 686
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 686
0 150 300 450 600
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 35/109 (32%), Positives = 52/109 (47%), Frame = +2
Query: 65 AYDPF--LKYVMLLSLPIASLITPVSC-PRELGQWIPATLLVIYN--VSTLLENLKIGLS 229
A+ PF + V+ LP +LI VS P+ W +++ L + L G +
Sbjct: 477 AFWPFWCIPLVVYGILPQVALIHGVSVFPKASDPWFWLYIILFLGGYAQDLSDFLLEGGT 536
Query: 230 IRTWCNNQRMARXTTMNSWFFGFLAILLKRLRISNIGFEITRKDEXFSNE 379
R W N+QRM ++S+FFGF LK L +S G+ +T K NE
Sbjct: 537 YRKWWNDQRMWMVRGLSSFFFGFTEFTLKTLNLSTQGYNVTSKSND-DNE 585
Score = 55 (19.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/72 (29%), Positives = 37/72 (51%), Frame = +3
Query: 384 QMKMMVRFIFNKSP---VFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCX 554
QMK + IF+ P +F+P TT+ ++ L A + G + G G + +L
Sbjct: 586 QMKRYEQEIFDFGPSSSMFLPITTVAIMNLLAFMRGLYG----IFTWGEGPVL--ELMLA 639
Query: 555 TYLVVLLLAIFERVI 599
++ VV L I+E ++
Sbjct: 640 SFAVVNCLPIYEAMV 654
>gi|2262115|gb|AAB63623.1| (AC002343) cellulose synthase isolog [Arabidopsis
thaliana]
Length = 730
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 730
0 150 300 450 600
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 35/109 (32%), Positives = 52/109 (47%), Frame = +2
Query: 65 AYDPF--LKYVMLLSLPIASLITPVSC-PRELGQWIPATLLVIYN--VSTLLENLKIGLS 229
A+ PF + V+ LP +LI VS P+ W +++ L + L G +
Sbjct: 521 AFWPFWCIPLVVYGILPQVALIHGVSVFPKASDPWFWLYIILFLGGYAQDLSDFLLEGGT 580
Query: 230 IRTWCNNQRMARXTTMNSWFFGFLAILLKRLRISNIGFEITRKDEXFSNE 379
R W N+QRM ++S+FFGF LK L +S G+ +T K NE
Sbjct: 581 YRKWWNDQRMWMVRGLSSFFFGFTEFTLKTLNLSTQGYNVTSKSND-DNE 629
Score = 55 (19.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 21/72 (29%), Positives = 37/72 (51%), Frame = +3
Query: 384 QMKMMVRFIFNKSP---VFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCX 554
QMK + IF+ P +F+P TT+ ++ L A + G + G G + +L
Sbjct: 630 QMKRYEQEIFDFGPSSSMFLPITTVAIMNLLAFMRGLYG----IFTWGEGPVL--ELMLA 683
Query: 555 TYLVVLLLAIFERVI 599
++ VV L I+E ++
Sbjct: 684 SFAVVNCLPIYEAMV 698
>gi|7484715|pir||T10800 cellulose synthase (EC 2.4.1.-) catalytic chain celA2 -
upland cotton (fragment) >gi|1706958|gb|AAB37767.1| (U58284)
cellulose synthase [Gossypium hirsutum]
Length = 685
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): ______
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 685
0 150 300 450 600
Plus Strand HSPs:
Score = 70 (24.6 bits), Expect = 0.0089, Sum P(3) = 0.0089
Identities = 16/48 (33%), Positives = 28/48 (58%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLF 548
++F + + IP TT++++ + +V G + NNG+GS WG LF
Sbjct: 576 YLFKWTTLLIPPTTLIILNMVGVVA---GVSDAI-NNGYGS--WGPLF 617
Score = 68 (23.9 bits), Expect = 0.0089, Sum P(3) = 0.0089
Identities = 11/43 (25%), Positives = 22/43 (51%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLP 141
GKL++ + L Y+ + +P + Y +PA C++ +P
Sbjct: 449 GKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIP 491
Score = 53 (18.7 bits), Expect = 0.0089, Sum P(3) = 0.0089
Identities = 19/67 (28%), Positives = 30/67 (44%), Frame = +2
Query: 158 WIPATLLVIYNVSTLLENLKIGLSIRTWCNNQRMARXTTMNSWFFGFLAILLKRLRISNI 337
W A L I + +LE G+SI+ W N++ +++ F LLK L +
Sbjct: 500 WFLALFLSII-ATGVLELRWSGVSIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDT 558
Query: 338 GFEITRK 358
F +T K
Sbjct: 559 NFTVTAK 565
>gi|7487587|pir||T08918 hypothetical protein T32A16.160 - Arabidopsis thaliana
>gi|4972103|emb|CAB43899.1| (AL078468) cellulose synthase catalytic
subunit-like protein [Arabidopsis thaliana]
>gi|7269248|emb|CAB81317.1| (AL161560) cellulose synthase catalytic
subunit-like protein [Arabidopsis thaliana]
Length = 689
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): ________
Frame 1 hits (HSPs): __
__________________________________________________
Database sequence: | | | | | | 689
0 150 300 450 600
Plus Strand HSPs:
Score = 88 (31.0 bits), Expect = 0.022, Sum P(3) = 0.022
Identities = 30/95 (31%), Positives = 43/95 (45%), Frame = +2
Query: 74 PFLKYVML--LSLPIASLITPVSCPRELGQWIPATLLVIYNVSTLLENLKIGLSIRTWCN 247
P + Y L L+L S + P S W+ L + LL+ + G + W N
Sbjct: 488 PLIVYGFLPQLALLYQSSVFPKSSDPWF--WLYIVLFLGAYGQDLLDFVLEGGTYGGWWN 545
Query: 248 NQRMARXTTMNSWFFGFLAILLKRLRISNIGFEITRK 358
+QRM +S FGF+ LK L +S GF +T K
Sbjct: 546 DQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSK 582
Score = 53 (18.7 bits), Expect = 0.022, Sum P(3) = 0.022
Identities = 22/72 (30%), Positives = 35/72 (48%), Frame = +3
Query: 384 QMKMMVRFIFNKSP---VFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCX 554
Q K + IF P +F+P TT+ ++ L A V W G G G+ +L
Sbjct: 589 QSKRYEKEIFEFGPSSSMFLPLTTVAIVNLLAFV--W-GLYGLFA---WGEGLVLELMLA 642
Query: 555 TYLVVLLLAIFERVI 599
++ VV L I+E ++
Sbjct: 643 SFAVVNCLPIYEAMV 657
Score = 42 (14.8 bits), Expect = 0.022, Sum P(3) = 0.022
Identities = 8/15 (53%), Positives = 10/15 (66%), Frame = +1
Query: 37 LGYLWITTWSLRPVP 81
L ++W TT SLR P
Sbjct: 67 LAFMWATTTSLRYKP 81
>gi|2262116|gb|AAB63624.1| (AC002343) cellulose synthase isolog [Arabidopsis
thaliana]
Length = 747
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): _______
Frame 1 hits (HSPs): __
__________________________________________________
Database sequence: | | | | | | 747
0 150 300 450 600
Plus Strand HSPs:
Score = 88 (31.0 bits), Expect = 0.029, Sum P(3) = 0.028
Identities = 30/95 (31%), Positives = 43/95 (45%), Frame = +2
Query: 74 PFLKYVML--LSLPIASLITPVSCPRELGQWIPATLLVIYNVSTLLENLKIGLSIRTWCN 247
P + Y L L+L S + P S W+ L + LL+ + G + W N
Sbjct: 546 PLIVYGFLPQLALLYQSSVFPKSSDPWF--WLYIVLFLGAYGQDLLDFVLEGGTYGGWWN 603
Query: 248 NQRMARXTTMNSWFFGFLAILLKRLRISNIGFEITRK 358
+QRM +S FGF+ LK L +S GF +T K
Sbjct: 604 DQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSK 640
Score = 53 (18.7 bits), Expect = 0.029, Sum P(3) = 0.028
Identities = 22/72 (30%), Positives = 35/72 (48%), Frame = +3
Query: 384 QMKMMVRFIFNKSP---VFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCX 554
Q K + IF P +F+P TT+ ++ L A V W G G G+ +L
Sbjct: 647 QSKRYEKEIFEFGPSSSMFLPLTTVAIVNLLAFV--W-GLYGLFA---WGEGLVLELMLA 700
Query: 555 TYLVVLLLAIFERVI 599
++ VV L I+E ++
Sbjct: 701 SFAVVNCLPIYEAMV 715
Score = 42 (14.8 bits), Expect = 0.029, Sum P(3) = 0.028
Identities = 8/15 (53%), Positives = 10/15 (66%), Frame = +1
Query: 37 LGYLWITTWSLRPVP 81
L ++W TT SLR P
Sbjct: 67 LAFMWATTTSLRYKP 81
>gi|10278356|emb|CAC09630.1| (AX030952) unnamed protein product [Arabidopsis
thaliana]
Length = 629
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): _________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 629
0 150 300 450 600
Plus Strand HSPs:
Score = 74 (26.0 bits), Expect = 0.097, Sum P(2) = 0.092
Identities = 12/44 (27%), Positives = 25/44 (56%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L+ + + Y+ + + +P I Y LPA+C+I + +P+
Sbjct: 391 GRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPE 434
Score = 70 (24.6 bits), Expect = 0.097, Sum P(2) = 0.092
Identities = 20/59 (33%), Positives = 32/59 (54%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCXTYLVVLLLA 581
+IF + + IP TT+LL+ L +V G V N+G+ S WG LF + + ++A
Sbjct: 519 YIFKWTALLIPPTTVLLVNLIGIVA---GVSYAV-NSGYQS--WGPLFGKLFFALWVIA 571
Score = 55 (19.4 bits), Expect = 8.9, Sum P(2) = 1.0
Identities = 24/95 (25%), Positives = 39/95 (41%), Frame = +2
Query: 74 PFLKYVMLLSLPIASLITPVSCPRELGQWIPATLLVIYNVSTLLENLKI---GLSIRTWC 244
P + Y +L P LIT E+ + ++++ + LK+ G+SI W
Sbjct: 413 PLIAYCIL---PAFCLITDRFIIPEISNYASIWFILLFISIAVTGILKLKWNGVSIEDWW 469
Query: 245 NNQRMARXTTMNSWFFGFLAILLKRLRISNIGFEITRK 358
N + ++ F LLK L N F +T K
Sbjct: 470 RNNQFWVIGGTSTHLFAVFQGLLKVLAGINTNFTVTSK 507
>gi|9622882|gb|AAF89965.1|AF200529_1 (AF200529) cellulose synthase-5 [Zea mays]
Length = 1076
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | | 1076
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 80 (28.2 bits), Expect = 0.20, Sum P(2) = 0.19
Identities = 14/44 (31%), Positives = 24/44 (54%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L+F + Y+ T + L +P + Y LPA C++ +PK
Sbjct: 839 GRLKFLERFAYINTTIYPLTSIPLLLYCILPAVCLLTGKFIIPK 882
Score = 65 (22.9 bits), Expect = 0.20, Sum P(2) = 0.19
Identities = 21/57 (36%), Positives = 35/57 (61%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
++F + + IP TTIL+I L +V G + N+G+ S G ++GKLF +++V L
Sbjct: 967 YMFKWTTLLIPPTTILIINLVGVVA---GISYAI-NSGYQSWGPLFGKLFFAFWVIVHL 1021
>gi|7484861|pir||T05351 cellulose synthase (EC 2.4.1.-) catalytic chain RSW1 -
Arabidopsis thaliana >gi|2827139|gb|AAC39334.1| (AF027172)
cellulose synthase catalytic subunit [Arabidopsis thaliana]
>gi|4049343|emb|CAA22568.1| (AL034567) cellulose synthase catalytic
subunit (RSW1) [Arabidopsis thaliana] >gi|7270145|emb|CAB79958.1|
(AL161581) cellulose synthase catalytic subunit (RSW1) [Arabidopsis
thaliana] >gi|10278360|emb|CAC09631.1| (AX030956) unnamed protein
product [Arabidopsis thaliana]
Length = 1081
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | | 1081
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 74 (26.0 bits), Expect = 0.31, Sum P(2) = 0.27
Identities = 12/44 (27%), Positives = 25/44 (56%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L+ + + Y+ + + +P I Y LPA+C+I + +P+
Sbjct: 843 GRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPE 886
Score = 70 (24.6 bits), Expect = 0.31, Sum P(2) = 0.27
Identities = 20/59 (33%), Positives = 32/59 (54%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCXTYLVVLLLA 581
+IF + + IP TT+LL+ L +V G V N+G+ S WG LF + + ++A
Sbjct: 971 YIFKWTALLIPPTTVLLVNLIGIVA---GVSYAV-NSGYQS--WGPLFGKLFFALWVIA 1023
>gi|10278366|emb|CAC09634.1| (AX030962) unnamed protein product [Arabidopsis
thaliana]
Length = 1081
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | | 1081
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 74 (26.0 bits), Expect = 0.31, Sum P(2) = 0.27
Identities = 12/44 (27%), Positives = 25/44 (56%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L+ + + Y+ + + +P I Y LPA+C+I + +P+
Sbjct: 843 GRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPE 886
Score = 70 (24.6 bits), Expect = 0.31, Sum P(2) = 0.27
Identities = 20/59 (33%), Positives = 32/59 (54%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCXTYLVVLLLA 581
+IF + + IP TT+LL+ L +V G V N+G+ S WG LF + + ++A
Sbjct: 971 YIFKWTALLIPPTTVLLVNLIGIVA---GVSYAV-NSGYQS--WGPLFGKLFFALWVIA 1023
>gi|8778304|gb|AAF79313.1|AC002304_6 (AC002304) F14J16.9 [Arabidopsis thaliana]
Length = 699
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 699
0 150 300 450 600
Plus Strand HSPs:
Score = 98 (34.5 bits), Expect = 0.33, P = 0.28
Identities = 34/95 (35%), Positives = 46/95 (48%), Frame = +2
Query: 74 PFLKYVMLLSLPIASLITPVSCPRELGQW-IP-ATLLVIYNVSTLLENLKIGLSIRTWCN 247
P L Y +L SL + I P+ P+ W IP + V +L E L G + R W N
Sbjct: 497 PVLIYSVLTSLCLFKGI-PLF-PKVSSSWFIPFGYVTVAATAYSLAEFLWCGGTFRGWWN 554
Query: 248 NQRMARXTTMNSWFFGFLAILLKRLRISNIGFEITRK 358
QRM +S+ FGF+ + K L +S F IT K
Sbjct: 555 EQRMWLYRRTSSFLFGFMDTIKKLLGVSESAFVITAK 591
>gi|9622878|gb|AAF89963.1|AF200527_1 (AF200527) cellulose synthase-3 [Zea mays]
Length = 821
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | | 821
0 150 300 450 600 750
Plus Strand HSPs:
Score = 75 (26.4 bits), Expect = 0.42, Sum P(2) = 0.34
Identities = 12/43 (27%), Positives = 23/43 (53%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLP 141
G+L+ + L Y+ + + +P + Y LPA C++ N +P
Sbjct: 583 GRLKLLERLAYINTIVYPITSIPLVAYCVLPAICLLTNKFIIP 625
Score = 65 (22.9 bits), Expect = 0.42, Sum P(2) = 0.34
Identities = 17/58 (29%), Positives = 31/58 (53%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKLFCXTYLVVLLL 578
++F + + IP TT+L+I L +V G + N+G+ S WG LF + + ++
Sbjct: 711 YVFKWTTLLIPPTTVLVINLVGIVA---GVSYAI-NSGYQS--WGPLFGKLFFAIWVI 762
>gi|9622876|gb|AAF89962.1|AF200526_1 (AF200526) cellulose synthase-2 [Zea mays]
Length = 1074
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | | 1074
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 78 (27.5 bits), Expect = 0.43, Sum P(2) = 0.35
Identities = 14/44 (31%), Positives = 24/44 (54%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L+ + L Y+ + + VP I Y LPA C++ N +P+
Sbjct: 836 GRLKLLERLAYINTIVYPITSVPLIAYCVLPAICLLTNKFIIPE 879
Score = 64 (22.5 bits), Expect = 0.43, Sum P(2) = 0.35
Identities = 19/57 (33%), Positives = 35/57 (61%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
++F + + IP TT+L+I L +V G + N+G+ S G ++GKLF ++++ L
Sbjct: 964 YVFKWTSLLIPPTTVLVINLVGMVA---GISYAI-NSGYQSWGPLFGKLFFSIWVILHL 1018
>gi|9759258|dbj|BAB09693.1| (AB018111) cellulose synthase catalytic subunit
[Arabidopsis thaliana]
Length = 1065
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | || 1065
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 78 (27.5 bits), Expect = 0.53, Sum P(2) = 0.41
Identities = 13/44 (29%), Positives = 24/44 (54%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L+F + Y+ T + + +P + Y LPA C+ N +P+
Sbjct: 828 GRLKFLERFAYVNTTIYPITSIPLLMYCTLPAVCLFTNQFIIPQ 871
Score = 63 (22.2 bits), Expect = 0.53, Sum P(2) = 0.41
Identities = 19/57 (33%), Positives = 35/57 (61%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
++F + + IP TT+L++ L +V G + N+G+ S G ++GKLF +++V L
Sbjct: 956 YLFKWTTLLIPPTTLLIVNLVGVVA---GVSYAI-NSGYQSWGPLFGKLFFAFWVIVHL 1010
>gi|9622874|gb|AAF89961.1|AF200525_1 (AF200525) cellulose synthase-1 [Zea mays]
Length = 1075
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | | 1075
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 0.57, Sum P(2) = 0.43
Identities = 13/44 (29%), Positives = 24/44 (54%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L+ + L Y+ + + +P I Y LPA C++ N +P+
Sbjct: 837 GRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPE 880
Score = 64 (22.5 bits), Expect = 0.57, Sum P(2) = 0.43
Identities = 19/57 (33%), Positives = 35/57 (61%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
++F + + IP TT+L+I L +V G + N+G+ S G ++GKLF ++++ L
Sbjct: 965 YVFKWTSLLIPPTTVLVINLVGMVA---GISYAI-NSGYQSWGPLFGKLFFSIWVILHL 1019
>gi|9622880|gb|AAF89964.1|AF200528_1 (AF200528) cellulose synthase-4 [Zea mays]
Length = 1077
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | | 1077
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 76 (26.8 bits), Expect = 0.58, Sum P(2) = 0.44
Identities = 13/44 (29%), Positives = 24/44 (54%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L+F + Y+ T + L +P + Y LPA C++ +P+
Sbjct: 840 GRLKFLERFAYINTTIYPLTSIPLLIYCILPAICLLTGKFIIPE 883
Score = 65 (22.9 bits), Expect = 0.58, Sum P(2) = 0.44
Identities = 21/57 (36%), Positives = 35/57 (61%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
++F + + IP TTIL+I L +V G + N+G+ S G ++GKLF +++V L
Sbjct: 968 YMFKWTTLLIPPTTILIINLVGVVA---GISYAI-NSGYQSWGPLFGKLFFAFWVIVHL 1022
>gi|9758562|dbj|BAB09063.1| (AB006703) cellulose synthase catalytic
subunit-like protein [Arabidopsis thaliana]
Length = 1043
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | 1043
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 73 (25.7 bits), Expect = 0.75, Sum P(2) = 0.53
Identities = 19/57 (33%), Positives = 36/57 (63%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
++F + + IP TT++++ + +V G + NNG+GS G ++GKLF +++V L
Sbjct: 934 YLFKWTTLLIPPTTLIILNMVGVVA---GVSDAI-NNGYGSWGPLFGKLFFAFWVIVHL 988
Score = 67 (23.6 bits), Expect = 0.75, Sum P(2) = 0.53
Identities = 11/43 (25%), Positives = 21/43 (48%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLP 141
GKL+ + L Y+ + +P + Y +PA C++ +P
Sbjct: 805 GKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIP 847
>gi|4432865|gb|AAD20713.1| (AC006300) putative cellulose synthase catalytic
subunit [Arabidopsis thaliana]
Length = 1065
Frame 3 hits (HSPs): ___
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | || 1065
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 79 (27.8 bits), Expect = 0.82, Sum P(2) = 0.56
Identities = 12/44 (27%), Positives = 26/44 (59%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L+ + + Y+ + + +P + Y LPA+C+I N+ +P+
Sbjct: 830 GRLKLLERIAYINTIVYPITSIPLLAYCMLPAFCLITNTFIIPE 873
Score = 60 (21.1 bits), Expect = 0.82, Sum P(2) = 0.56
Identities = 17/47 (36%), Positives = 26/47 (55%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGSGVWGKL 545
++F + + IP TTILL+ L +V G + N+G+ S WG L
Sbjct: 958 YVFKWTSLLIPPTTILLVNLVGIVA---GVSYAI-NSGYQS--WGPL 998
>gi|6446577|gb|AAD39534.2| (AF150630) cellulose synthase catalytic subunit
[Gossypium hirsutum]
Length = 1067
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | || 1067
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 74 (26.0 bits), Expect = 0.97, Sum P(2) = 0.62
Identities = 12/44 (27%), Positives = 25/44 (56%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L++ + Y+ T + + +P + Y LPA C++ N +P+
Sbjct: 830 GRLKWLERFAYVNTTIYPVTAIPLLMYCTLPAVCLLTNKFIIPQ 873
Score = 65 (22.9 bits), Expect = 0.97, Sum P(2) = 0.62
Identities = 19/57 (33%), Positives = 36/57 (63%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
++F + + IP TT+L+I L +V + + V N+G+ S G ++GKLF ++++ L
Sbjct: 958 YMFKWTTLLIPPTTLLIINLVGVVA-GISY---VINSGYQSWGPLFGKLFFAFWVIIHL 1012
>gi|9622890|gb|AAF89969.1|AF200533_1 (AF200533) cellulose synthase-9 [Zea mays]
Length = 1079
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | | 1079
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 74 (26.0 bits), Expect = 0.99, Sum P(2) = 0.63
Identities = 13/44 (29%), Positives = 24/44 (54%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L+F + Y+ T + L +P + Y LPA C++ +P+
Sbjct: 842 GRLKFLERFAYINTTIYPLTSLPLLIYCILPAICLLTGKFIIPE 885
Score = 65 (22.9 bits), Expect = 0.99, Sum P(2) = 0.63
Identities = 21/57 (36%), Positives = 35/57 (61%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
++F + + IP TTIL+I L +V G + N+G+ S G ++GKLF +++V L
Sbjct: 970 YMFKWTTLLIPPTTILIINLVGVVA---GISYAI-NSGYQSWGPLFGKLFFAFWVIVHL 1024
>gi|3511285|gb|AAC78476.1| (AF081534) cellulose synthase [Populus x canescens]
Length = 1042
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | 1042
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 72 (25.3 bits), Expect = 1.9, Sum P(2) = 0.86
Identities = 19/57 (33%), Positives = 36/57 (63%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
++F + + IP TT++++ + +V G + NNG+GS G ++GKLF +++V L
Sbjct: 933 YLFKWTTLLIPPTTLIILNMVGVVA---GVSARI-NNGYGSWGPLFGKLFFAFWVIVHL 987
Score = 64 (22.5 bits), Expect = 1.9, Sum P(2) = 0.86
Identities = 11/43 (25%), Positives = 20/43 (46%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLP 141
GKL+ + L Y+ + +P + Y PA C++ +P
Sbjct: 806 GKLKLLERLAYINTIVYPFTSIPLLAYCTTPAVCLLTGKFIIP 848
>gi|4886756|gb|AAD32031.1|AF088917_1 (AF088917) cellulose synthase catalytic
subunit [Arabidopsis thaliana]
Length = 1026
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | 1026
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 2.7, Sum P(2) = 0.93
Identities = 12/43 (27%), Positives = 22/43 (51%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLP 141
GKL++ + Y T + +P + Y LPA C++ + +P
Sbjct: 790 GKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMP 832
Score = 67 (23.6 bits), Expect = 2.7, Sum P(2) = 0.93
Identities = 20/57 (35%), Positives = 34/57 (59%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
+ F + + IP TT+L+I + +V G + NNG+ S G ++GKLF +++V L
Sbjct: 917 YAFKWTTLLIPPTTVLIINIVGVVA---GISDAI-NNGYQSWGPLFGKLFFSFWVIVHL 971
>gi|11357223|pir||T51579 cellulose synthase catalytic subunit (IRX3) -
Arabidopsis thaliana >gi|5230423|gb|AAD40885.1|AF091713_1
(AF091713) cellulose synthase catalytic subunit [Arabidopsis
thaliana] >gi|9755765|emb|CAC01737.1| (AL391142) cellulose synthase
catalytic subunit (IRX3) [Arabidopsis thaliana]
Length = 1026
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | 1026
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 2.7, Sum P(2) = 0.93
Identities = 12/43 (27%), Positives = 22/43 (51%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLP 141
GKL++ + Y T + +P + Y LPA C++ + +P
Sbjct: 790 GKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMP 832
Score = 67 (23.6 bits), Expect = 2.7, Sum P(2) = 0.93
Identities = 20/57 (35%), Positives = 34/57 (59%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
+ F + + IP TT+L+I + +V G + NNG+ S G ++GKLF +++V L
Sbjct: 917 YAFKWTTLLIPPTTVLIINIVGVVA---GISDAI-NNGYQSWGPLFGKLFFSFWVIVHL 971
>gi|2827143|gb|AAC39336.1| (AF027174) cellulose synthase catalytic subunit
[Arabidopsis thaliana]
Length = 1065
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | || 1065
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 7.2, Sum P(2) = 1.0
Identities = 12/44 (27%), Positives = 23/44 (52%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L+F + Y+ T + + +P + Y L A C+ N +P+
Sbjct: 828 GRLKFLERFAYVNTTIYPITSIPLLMYCTLLAVCLFTNQFIIPQ 871
Score = 63 (22.2 bits), Expect = 7.2, Sum P(2) = 1.0
Identities = 19/57 (33%), Positives = 35/57 (61%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
++F + + IP TT+L++ L +V G + N+G+ S G ++GKLF +++V L
Sbjct: 956 YLFKWTTLLIPPTTLLIVNLVGVVA---GVSYAI-NSGYQSWGPLFGKLFFAFWVIVHL 1010
>gi|10278364|emb|CAC09633.1| (AX030960) unnamed protein product [Arabidopsis
thaliana]
Length = 1065
Frame 3 hits (HSPs): ____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | || 1065
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 7.2, Sum P(2) = 1.0
Identities = 12/44 (27%), Positives = 23/44 (52%), Frame = +1
Query: 13 GKLQFRQCLGYLWITTWSLRPVPEICYAALPAYCIINNSSFLPK 144
G+L+F + Y+ T + + +P + Y L A C+ N +P+
Sbjct: 828 GRLKFLERFAYVNTTIYPITSIPLLMYCTLLAVCLFTNQFIIPQ 871
Score = 63 (22.2 bits), Expect = 7.2, Sum P(2) = 1.0
Identities = 19/57 (33%), Positives = 35/57 (61%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLL 575
++F + + IP TT+L++ L +V G + N+G+ S G ++GKLF +++V L
Sbjct: 956 YLFKWTTLLIPPTTLLIVNLVGVVA---GVSYAI-NSGYQSWGPLFGKLFFAFWVIVHL 1010
>gi|9622884|gb|AAF89966.1|AF200530_1 (AF200530) cellulose synthase-6 [Zea mays]
Length = 1059
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | || 1059
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 7.3, Sum P(2) = 1.0
Identities = 29/103 (28%), Positives = 42/103 (40%), Frame = +2
Query: 74 PFLKYVML--LSLPIASLITPVSCPRELGQWIPATLLVIYNVSTLLENLKIGLSIRTWCN 247
P L Y L + L ITP W + + I+ S +LE G+ I W
Sbjct: 844 PLLAYCTLPAICLLTGKFITP-ELNNVASLWFMSLFICIFATS-ILEMRWSGVGIDDWWR 901
Query: 248 NQRMARXTTMNSWFFGFLAILLKRLRISNIGFEITRK---DEXFS 373
N++ ++S F LLK + + F +T K DE FS
Sbjct: 902 NEQFWVIGGVSSHLFAVFQGLLKVIAGVDTSFTVTSKGGDDEEFS 946
Score = 63 (22.2 bits), Expect = 7.3, Sum P(2) = 1.0
Identities = 20/65 (30%), Positives = 36/65 (55%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLLL 578
+ F + + IP TT+LL+ +V G + NNG+ S G ++GKLF +++V L
Sbjct: 949 YTFKWTTLLIPPTTLLLLNFIGVVA---GISNAI-NNGYESWGPLFGKLFFAFWVIVHLY 1004
Query: 579 AIFERVI 599
+ ++
Sbjct: 1005 PFLKGLV 1011
>gi|9622886|gb|AAF89967.1|AF200531_1 (AF200531) cellulose synthase-7 [Zea mays]
Length = 1086
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | | | 1086
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 7.7, Sum P(2) = 1.0
Identities = 29/103 (28%), Positives = 42/103 (40%), Frame = +2
Query: 74 PFLKYVML--LSLPIASLITPVSCPRELGQWIPATLLVIYNVSTLLENLKIGLSIRTWCN 247
P L Y L + L ITP W + + I+ S +LE G+ I W
Sbjct: 871 PLLAYCTLPAICLLTGKFITP-ELNNVASLWFMSLFICIFATS-ILEMRWSGVGIDDWWR 928
Query: 248 NQRMARXTTMNSWFFGFLAILLKRLRISNIGFEITRK---DEXFS 373
N++ ++S F LLK + + F +T K DE FS
Sbjct: 929 NEQFWVIGGVSSHLFAVFQGLLKVIAGVDTSFTVTSKGGDDEEFS 973
Score = 63 (22.2 bits), Expect = 7.7, Sum P(2) = 1.0
Identities = 20/65 (30%), Positives = 36/65 (55%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLLL 578
+ F + + IP TT+LL+ +V G + NNG+ S G ++GKLF +++V L
Sbjct: 976 YTFKWTTLLIPPTTLLLLNFIGVVA---GVSNAI-NNGYESWGPLFGKLFFAFWVIVHLY 1031
Query: 579 AIFERVI 599
+ ++
Sbjct: 1032 PFLKGLV 1038
>gi|9622888|gb|AAF89968.1|AF200532_1 (AF200532) cellulose synthase-8 [Zea mays]
Length = 1094
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | | | 1094
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 67 (23.6 bits), Expect = 10., Sum P(2) = 1.0
Identities = 29/103 (28%), Positives = 43/103 (41%), Frame = +2
Query: 74 PFLKYVML--LSLPIASLITPVSCPRELGQWIPATLLVIYNVSTLLENLKIGLSIRTWCN 247
P L Y L + L ITP W A L + +V+ +LE G++I W
Sbjct: 879 PLLAYCTLPAICLLTGKFITP-ELTNVASIWFMA-LFICISVTGILEMRWSGVAIDDWWR 936
Query: 248 NQRMARXTTMNSWFFGFLAILLKRLRISNIGFEITRK---DEXFS 373
N++ +++ F LLK + F +T K DE FS
Sbjct: 937 NEQFWVIGGVSAHLFAVFQGLLKVFAGIDTSFTVTSKAGDDEEFS 981
Score = 63 (22.2 bits), Expect = 10., Sum P(2) = 1.0
Identities = 20/65 (30%), Positives = 36/65 (55%), Frame = +3
Query: 405 FIFNKSPVFIPGTTILLIQLTALVTMWLGWQPPVXNNGHGS-G-VWGKLFCXTYLVVLLL 578
+ F + + IP TT+LL+ +V G + NNG+ S G ++GKLF +++V L
Sbjct: 984 YTFKWTTLLIPPTTLLLLNFIGVVA---GISNAI-NNGYESWGPLFGKLFFAFWVIVHLY 1039
Query: 579 AIFERVI 599
+ ++
Sbjct: 1040 PFLKGLV 1046
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.97
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.358 0.163 0.629
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.333 0.145 0.499
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.346 0.154 0.601
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.337 0.142 0.511
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.347 0.154 0.539
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.358 0.159 0.552
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 200 195 10. 76 3 12 22 0.091 35
31 0.10 38
+2 0 200 196 10. 76 3 12 22 0.092 35
31 0.10 38
+1 0 200 194 10. 76 3 12 22 0.091 35
31 0.10 38
-1 0 200 195 10. 76 3 12 22 0.091 35
31 0.10 38
-2 0 200 196 10. 76 3 12 22 0.092 35
31 0.10 38
-3 0 200 194 10. 76 3 12 22 0.091 35
31 0.10 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 35
No. of states in DFA: 598 (59 KB)
Total size of DFA: 248 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 205.48u 1.13s 206.61t Elapsed: 00:00:56
Total cpu time: 205.54u 1.14s 206.68t Elapsed: 00:00:56
Start: Wed Oct 3 11:06:56 2001 End: Wed Oct 3 11:07:52 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000