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Report for CCDS ID CCDS12036

CCDS Status Species Chrom. Gene NCBI Builds Links
12036.1 Public Homo sapiens 19 POLRMT 35.1 - 36.3 CCDS HistoryEntrezGene:5442Re-query CCDS DB by GeneID:5442

Sequence IDs included in CCDS 12036.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENST00000215591 ENSP00000215591 Accepted alive Link to Ensembl Transcript Viewer:ENST00000215591Link to Ensembl Protein Viewer:ENSP00000215591Re-query CCDS DB by Nucleotide ID:ENST00000215591Re-query CCDS DB by Protein ID:ENSP00000215591
Original member Current member NCBI NM_005035.3 NP_005026.3 Accepted alive Link to Nucleotide Sequence:NM_005035.3Link to Protein Sequence:NP_005026.3Re-query CCDS DB by Nucleotide ID:NM_005035Re-query CCDS DB by Protein ID:NP_005026

Chromosomal Locations for CCDS 12036.1

On '-' strand of Chromosome 19 (NC_000019.8)
Genome Browser links: Link to NCBI Map Viewer on chromosome 19Link to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

Chromosome Start Stop Links
19 568274 568323 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 568419 568480 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 568570 568655 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 568777 568849 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 569488 569586 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 569705 569760 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 569997 570110 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 570210 570296 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 570586 570765 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 570958 571080 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 571365 571487 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 572058 572846 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 573149 573373 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 573582 573752 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 573821 573985 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 574454 574603 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 575719 575905 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 576124 576254 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 580540 581168 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 583834 583938 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 584425 584512 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternate exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3693 nt):
ATGTCGGCACTTTGCTGGGGCCGCGGAGCGGCGGGGCTCAAACGAGCCCTACGGCCTTGCGGCCGCCCGG
GACTCCCCGGCAAAGAAGGGACCGCCGGTGGCGTCTGCGGCCCCAGGAGGAGCTCGTCCGCCAGCCCCCA
GGAGCAAGACCAAGACCGCAGGAAGGACTGGGGCCACGTGGAGCTGCTGGAGGTGCTCCAGGCGCGGGTG
CGGCAGCTGCAGGCTGAGAGCGTGTCGGAGGTGGTGGTGAACAGGGTGGATGTGGCGCGGCTCCCAGAAT
GTGGCAGTGGAGATGGTAGCCTCCAGCCACCCAGGAAGGTCCAGATGGGGGCCAAGGATGCCACCCCGGT
GCCCTGTGGCCGCTGGGCAAAGATACTGGAGAAGGATAAGCGGACCCAGCAGATGCGTATGCAGCGGTTG
AAGGCGAAGCTGCAGATGCCATTCCAGAGCGGGGAGTTCAAGGCGCTGACCAGGCGCCTGCAGGTGGAGC
CCCGGCTCCTGAGCAAGCAGATGGCCGGGTGCCTGGAGGACTGCACGCGCCAGGCCCCCGAGAGCCCCTG
GGAGGAGCAGCTGGCCCGGCTGCTGCAGGAGGCCCCTGGGAAGCTGAGCCTCGATGTGGAGCAGGCCCCG
TCGGGGCAGCACTCGCAGGCCCAGCTCTCAGGTCAGCAGCAGAGGCTCCTGGCCTTCTTCAAGTGCTGCC
TGCTCACTGACCAGCTGCCCCTCGCCCACCACCTGCTGGTCGTCCACCACGGCCAGCGGCAGAAGCGGAA
GCTGCTCACGCTGGACATGTACAACGCCGTGATGCTTGGCTGGGCGCGGCAGGGTGCCTTCAAGGAGCTG
GTATATGTGTTATTCATGGTGAAGGATGCCGGCTTGACTCCGGACCTGCTGTCCTATGCGGCTGCCCTCC
AGTGCATGGGGAGGCAGGACCAGGACGCCGGGACCATCGAAAGGTGTCTGGAACAGATGAGCCAGGAGGG
GCTGAAGCTGCAGGCACTCTTCACCGCCGTTCTGCTGTCTGAGGAGGATCGGGCCACTGTTCTGAAGGCC
GTGCACAAGGTGAAGCCCACCTTCAGCCTCCCGCCGCAGCTGCCGCCCCCGGTCAACACCTCCAAGCTGC
TCAGGGACGTGTATGCCAAGGATGGGCGTGTGTCCTACCCGAAGCTGCACCTGCCCTTGAAGACCCTGCA
GTGCCTCTTTGAGAAGCAGCTCCACATGGAGCTGGCCAGCAGGGTGTGCGTGGTGTCCGTGGAGAAGCCC
ACGTTGCCAAGCAAGGAGGTCAAGCACGCGCGGAAGACCCTGAAGACCCTGCGGGACCAATGGGAGAAAG
CACTGTGCCGGGCGCTGCGGGAGACCAAGAACCGCCTAGAGCGCGAGGTGTACGAGGGCCGGTTCTCACT
TTACCCCTTCCTGTGCCTGCTGGACGAGCGCGAGGTGGTGCGGATGCTCCTGCAGGTCCTGCAGGCGCTG
CCCGCCCAAGGTGAGTCCTTCACCACCCTGGCCCGGGAGCTGAGTGCGCGCACTTTCAGCCGGCACGTGG
TGCAGAGGCAGCGGGTCAGTGGCCAGGTGCAGGCGCTGCAGAACCACTACAGGAAGTACCTCTGCTTGCT
GGCCTCCGACGCCGAGGTGCCCGAGCCCTGCCTGCCGCGGCAGTACTGGGAGGAGCTGGGGGCGCCCGAG
GCCCTGCGGGAGCAGCCCTGGCCCCTGCCAGTGCAGATGGAGCTGGGCAAGCTGCTGGCGGAGATGCTGG
TGCAGGCTACGCAGATGCCATGCAGCCTGGACAAGCCGCATCGTTCCTCTCGGCTTGTCCCCGTGCTCTA
CCACGTGTATTCCTTCCGCAACGTCCAGCAGATCGGCATCCTGAAGCCGCACCCGGCCTACGTGCAGCTG
CTGGAGAAGGCCGCGGAGCCCACGCTGACCTTCGAGGCGGTGGATGTACCCATGCTTTGCCCCCCGCTGC
CCTGGACATCGCCGCACTCTGGTGCTTTCCTGCTCAGCCCCACCAAGCTGATGCGCACGGTGGAAGGCGC
CACGCAGCACCAGGAGCTGCTGGAAACCTGCCCGCCCACCGCGCTGCATGGCGCACTGGACGCCCTCACC
CAACTGGGCAACTGCGCCTGGCGCGTCAACGGGCGCGTGCTGGACCTGGTGCTGCAGCTCTTCCAGGCCA
AGGGCTGCCCCCAGCTAGGCGTGCCGGCCCCGCCCTCCGAGGCGCCCCAGCCGCCCGAGGCCCACCTGCC
GCACAGCGCCGCGCCCGCCCGCAAGGCCGAGCTGCGCCGTGAGCTGGCGCACTGCCAGAAGGTGGCCCGG
GAGATGCACAGCCTGCGGGCGGAGGCGCTGTACCGCCTCTCGCTGGCGCAGCACCTGCGGGACCGCGTCT
TCTGGCTGCCGCACAACATGGACTTCCGCGGCCGCACCTACCCCTGCCCGCCGCACTTCAACCACCTGGG
CAGCGACGTGGCGCGGGCCCTGCTGGAGTTCGCCCAGGGCCGCCCGCTCGGCCCGCACGGCCTGGATTGG
CTCAAGATCCACCTGGTCAATCTCACGGGGTTGAAGAAGCGGGAGCCGCTGCGGAAGCGCCTGGCCTTTG
CGGAGGAGGTGATGGATGACATCCTGGACTCCGCGGACCAACCCTTGACGGGCCGAAAGTGGTGGATGGG
CGCGGAGGAACCCTGGCAGACGCTGGCCTGCTGTATGGAGGTGGCGAACGCTGTGCGCGCCTCCGACCCT
GCCGCCTATGTCTCCCACCTCCCCGTCCATCAGGACGGCTCTTGCAACGGCCTGCAGCATTATGCTGCTC
TGGGCCGCGACAGCGTGGGCGCCGCCTCCGTCAACCTGGAGCCCTCGGATGTGCCGCAGGACGTGTACAG
CGGCGTGGCCGCGCAGGTGGAGGTGTTCCGTAGGCAGGACGCCCAGCGGGGCATGCGGGTGGCACAGGTG
CTGGAAGGTTTCATCACCCGCAAGGTGGTGAAGCAGACGGTGATGACGGTGGTGTACGGGGTCACGCGCT
ATGGCGGGCGCCTGCAGATTGAGAAGCGCCTCCGGGAGCTGAGCGACTTTCCCCAGGAGTTCGTGTGGGA
GGCCTCTCACTATCTCGTACGCCAGGTCTTCAAGAGTCTACAGGAGATGTTCTCGGGGACCCGGGCCATC
CAGCACTGGCTGACCGAGAGTGCCCGCCTCATCTCCCACATGGGCTCTGTGGTGGAGTGGGTCACACCCC
TGGGCGTCCCCGTCATCCAGCCCTATCGCCTGGACTCCAAGGTCAAGCAAATAGGAGGTGGAATTCAGAG
CATCACCTACACCCACAACGGAGACATCAGCCGAAAGCCCAACACACGTAAGCAGAAGAACGGCTTCCCG
CCCAACTTCATCCACTCGCTGGACTCCTCCCACATGATGCTCACCGCCCTGCACTGCTACAGGAAGGGCC
TGACCTTCGTCTCTGTGCACGACTGTTACTGGACTCACGCAGCTGATGTCTCCGTCATGAACCAGGTGTG
CCGGGAGCAGTTTGTCCGCTTGCACAGCGAGCCCATCCTGCAGGACCTGTCCAGATTCCTGGTCAAGCGG
TTCTGCTCTGAGCCCCAGAAGATCTTGGAGGCCAGCCAGCTGAAGGAGACACTGCAGGCGGTGCCCAAGC
CAGGGGCCTTCGACCTGGAGCAGGTGAAGCGTTCCACCTACTTCTTCAGCTGA

Translation (1230 aa):
MSALCWGRGAAGLKRALRPCGRPGLPGKEGTAGGVCGPRRSSSASPQEQDQDRRKDWGHVELLEVLQARV
RQLQAESVSEVVVNRVDVARLPECGSGDGSLQPPRKVQMGAKDATPVPCGRWAKILEKDKRTQQMRMQRL
KAKLQMPFQSGEFKALTRRLQVEPRLLSKQMAGCLEDCTRQAPESPWEEQLARLLQEAPGKLSLDVEQAP
SGQHSQAQLSGQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKEL
VYVLFMVKDAGLTPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLLSEEDRATVLKA
VHKVKPTFSLPPQLPPPVNTSKLLRDVYAKDGRVSYPKLHLPLKTLQCLFEKQLHMELASRVCVVSVEKP
TLPSKEVKHARKTLKTLRDQWEKALCRALRETKNRLEREVYEGRFSLYPFLCLLDEREVVRMLLQVLQAL
PAQGESFTTLARELSARTFSRHVVQRQRVSGQVQALQNHYRKYLCLLASDAEVPEPCLPRQYWEELGAPE
ALREQPWPLPVQMELGKLLAEMLVQATQMPCSLDKPHRSSRLVPVLYHVYSFRNVQQIGILKPHPAYVQL
LEKAAEPTLTFEAVDVPMLCPPLPWTSPHSGAFLLSPTKLMRTVEGATQHQELLETCPPTALHGALDALT
QLGNCAWRVNGRVLDLVLQLFQAKGCPQLGVPAPPSEAPQPPEAHLPHSAAPARKAELRRELAHCQKVAR
EMHSLRAEALYRLSLAQHLRDRVFWLPHNMDFRGRTYPCPPHFNHLGSDVARALLEFAQGRPLGPHGLDW
LKIHLVNLTGLKKREPLRKRLAFAEEVMDDILDSADQPLTGRKWWMGAEEPWQTLACCMEVANAVRASDP
AAYVSHLPVHQDGSCNGLQHYAALGRDSVGAASVNLEPSDVPQDVYSGVAAQVEVFRRQDAQRGMRVAQV
LEGFITRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQEFVWEASHYLVRQVFKSLQEMFSGTRAI
QHWLTESARLISHMGSVVEWVTPLGVPVIQPYRLDSKVKQIGGGIQSITYTHNGDISRKPNTRKQKNGFP
PNFIHSLDSSHMMLTALHCYRKGLTFVSVHDCYWTHAADVSVMNQVCREQFVRLHSEPILQDLSRFLVKR
FCSEPQKILEASQLKETLQAVPKPGAFDLEQVKRSTYFFS


Links Key
 Links to:   History report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Map Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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