BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SP_0978
(317 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148992886|ref|ZP_01822505.1| foldase protein PrsA [Strep... 583 e-165
gi|15900855|ref|NP_345459.1| competence protein CoiA [Strep... 582 e-165
gi|149010375|ref|ZP_01831746.1| foldase protein PrsA [Strep... 582 e-165
gi|149019570|ref|ZP_01834889.1| competence protein CoiA [St... 582 e-164
gi|15902925|ref|NP_358475.1| Competence protein [Streptococ... 580 e-164
gi|149006343|ref|ZP_01830055.1| foldase protein PrsA [Strep... 579 e-164
gi|3211759|gb|AAC23746.1| competence protein [Streptococcus... 472 e-131
gi|146318898|ref|YP_001198610.1| Competence protein [Strept... 316 1e-84
gi|125717599|ref|YP_001034732.1| Competence protein, putati... 313 1e-83
gi|81096865|ref|ZP_00875192.1| Competence CoiA-like [Strept... 310 6e-83
gi|157074777|gb|ABV09460.1| competence protein CoiA [Strept... 291 3e-77
gi|25010878|ref|NP_735273.1| hypothetical protein gbs0823 [... 283 9e-75
gi|22536968|ref|NP_687819.1| competence protein CoiA [Strep... 283 1e-74
gi|77409623|ref|ZP_00786297.1| competence protein CoiA [Str... 281 3e-74
gi|77406564|ref|ZP_00783613.1| competence protein CoiA [Str... 281 4e-74
gi|24379117|ref|NP_721072.1| putative competence protein/tr... 268 3e-70
gi|55822427|ref|YP_140868.1| competence protein, transcript... 249 2e-64
gi|15673710|ref|NP_267884.1| CoiA [Lactococcus lactis subsp... 248 3e-64
gi|116627346|ref|YP_819965.1| Competence protein [Streptoco... 248 5e-64
gi|55820536|ref|YP_138978.1| competence protein, transcript... 247 6e-64
gi|1771202|emb|CAA68043.1| transcription factor [Lactococcu... 245 2e-63
gi|116512583|ref|YP_811490.1| Competence protein [Lactococc... 239 2e-61
gi|94988814|ref|YP_596915.1| putative competence protein/tr... 230 9e-59
gi|21910599|ref|NP_664867.1| putative competence protein [S... 229 2e-58
gi|139473572|ref|YP_001128288.1| competence protein CoiA-li... 229 2e-58
gi|71903793|ref|YP_280596.1| putative competence protein/tr... 228 3e-58
gi|19746360|ref|NP_607496.1| putative transcription factor ... 228 3e-58
gi|50914458|ref|YP_060430.1| Putative competence protein/tr... 228 4e-58
gi|15675318|ref|NP_269492.1| putative transcription factor ... 227 7e-58
gi|56808352|ref|ZP_00366109.1| COG4469: Competence protein ... 227 7e-58
gi|94990716|ref|YP_598816.1| Putative competence protein/tr... 227 8e-58
gi|28895712|ref|NP_802062.1| putative transcription factor ... 209 2e-52
gi|1771207|emb|CAA68132.1| pepF2 [Lactococcus lactis] 150 9e-35
gi|29377157|ref|NP_816311.1| competence protein, putative [... 137 9e-31
gi|28378824|ref|NP_785716.1| competence protein [Lactobacil... 111 5e-23
gi|90961374|ref|YP_535290.1| Putative competence protein/tr... 107 8e-22
gi|69247675|ref|ZP_00604451.1| Competence CoiA-like [Entero... 96 4e-18
gi|52144138|ref|YP_082690.1| possible competence protein [B... 90 2e-16
gi|49480047|ref|YP_035432.1| possible competence protein [B... 90 2e-16
gi|30261303|ref|NP_843680.1| hypothetical protein BA1205 [B... 90 2e-16
gi|148543804|ref|YP_001271174.1| Competence CoiA family pro... 89 3e-16
gi|118476771|ref|YP_893922.1| possible competence protein [... 89 4e-16
gi|149182737|ref|ZP_01861202.1| hypothetical protein BSG1_1... 89 5e-16
gi|30019346|ref|NP_830977.1| putative competence protein/tr... 87 1e-15
gi|92090000|ref|ZP_01274914.1| Competence CoiA-like [Lactob... 87 1e-15
gi|47568399|ref|ZP_00239100.1| putative competence protein/... 87 1e-15
gi|49483162|ref|YP_040386.1| hypothetical protein SAR0967 [... 86 2e-15
gi|16804228|ref|NP_465713.1| hypothetical protein lmo2189 [... 86 3e-15
gi|153197063|ref|ZP_01941362.1| competence protein [Listeri... 86 3e-15
gi|152974720|ref|YP_001374237.1| Competence CoiA family pro... 86 3e-15
gi|56964291|ref|YP_176022.1| competence protein/transcripti... 86 4e-15
gi|15923989|ref|NP_371523.1| similar to transcription facto... 85 5e-15
gi|57650192|ref|YP_185872.1| competence protein, putative [... 85 5e-15
gi|46908423|ref|YP_014812.1| CoiA-like family protein [List... 85 6e-15
gi|153203289|ref|ZP_01944612.1| competence protein [Listeri... 85 7e-15
gi|21282610|ref|NP_645698.1| hypothetical protein MW0881 [S... 85 7e-15
gi|42518745|ref|NP_964675.1| hypothetical protein LJ0820 [L... 84 1e-14
gi|82750612|ref|YP_416353.1| probable competence-related pr... 84 1e-14
gi|15615420|ref|NP_243723.1| hypothetical protein BH2857 [B... 84 1e-14
gi|116873622|ref|YP_850403.1| CoiA-like family protein [Lis... 84 1e-14
gi|89098112|ref|ZP_01170998.1| hypothetical protein B14911_... 84 2e-14
gi|89204582|ref|ZP_01183159.1| Competence CoiA-like [Bacill... 83 2e-14
gi|16801357|ref|NP_471625.1| hypothetical protein lin2293 [... 82 3e-14
gi|42780387|ref|NP_977634.1| hypothetical protein BCE_1313 ... 81 7e-14
gi|47095763|ref|ZP_00233369.1| competence protein [Listeria... 80 1e-13
gi|124521626|ref|ZP_01696509.1| Competence CoiA-like [Bacil... 80 2e-13
gi|116629985|ref|YP_815157.1| Competence protein [Lactobaci... 79 3e-13
gi|16078218|ref|NP_389035.1| hypothetical protein BSU11530 ... 77 1e-12
gi|116494406|ref|YP_806140.1| Competence protein [Lactobaci... 77 1e-12
gi|75761254|ref|ZP_00741237.1| Putative competence protein/... 76 3e-12
gi|154685587|ref|YP_001420748.1| YjbF [Bacillus amyloliquef... 76 3e-12
gi|126654178|ref|ZP_01725985.1| hypothetical protein BB1490... 75 6e-12
gi|138894373|ref|YP_001124826.1| hypothetical protein GTNG_... 75 6e-12
gi|56419356|ref|YP_146674.1| hypothetical protein GK0821 [G... 75 7e-12
gi|116334078|ref|YP_795605.1| Competence protein [Lactobaci... 74 1e-11
gi|58336968|ref|YP_193553.1| competence protein [Lactobacil... 73 2e-11
gi|52079655|ref|YP_078446.1| conserved protein YjbF [Bacill... 72 3e-11
gi|116492966|ref|YP_804701.1| Competence protein [Pediococc... 69 3e-10
gi|118587357|ref|ZP_01544783.1| competence protein, CoiA-li... 69 3e-10
gi|116491178|ref|YP_810722.1| Competence protein [Oenococcu... 65 4e-09
gi|116513687|ref|YP_812593.1| Competence protein [Lactobaci... 62 7e-08
gi|23098670|ref|NP_692136.1| hypothetical protein OB1215 [O... 60 3e-07
gi|89095754|ref|ZP_01168648.1| hypothetical protein B14911_... 59 3e-07
gi|73663095|ref|YP_301876.1| putative competence protein [S... 59 4e-07
gi|46445812|ref|YP_007177.1| hypothetical protein pc0178 [C... 59 5e-07
gi|70726959|ref|YP_253873.1| hypothetical protein SH1958 [S... 58 9e-07
>gi|148992886|ref|ZP_01822505.1| foldase protein PrsA [Streptococcus pneumoniae SP9-BS68]
gi|147928338|gb|EDK79354.1| foldase protein PrsA [Streptococcus pneumoniae SP9-BS68]
Length = 317
Score = 583 bits (1502), Expect = e-165, Method: Composition-based stats.
Identities = 315/317 (99%), Positives = 317/317 (100%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
MFVARDARGELVNVLEDKLEKQAYTCPACGGQ+HLRQGPSVRTHFAHKSLKDCDFFFENE
Sbjct: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
SPEH+ANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS
Sbjct: 61 SPEHIANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ
Sbjct: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
Sbjct: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
Query: 241 KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK 300
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK
Sbjct: 241 KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK 300
Query: 301 LYPPAFYQQYFLKNMVE 317
LYPPAFYQQYFLKNMVE
Sbjct: 301 LYPPAFYQQYFLKNMVE 317
>gi|15900855|ref|NP_345459.1| competence protein CoiA [Streptococcus pneumoniae TIGR4]
gi|111657961|ref|ZP_01408668.1| hypothetical protein SpneT_02000850 [Streptococcus pneumoniae
TIGR4]
gi|148984721|ref|ZP_01817989.1| competence protein CoiA [Streptococcus pneumoniae SP3-BS71]
gi|148988423|ref|ZP_01819870.1| competence protein CoiA [Streptococcus pneumoniae SP6-BS73]
gi|148998585|ref|ZP_01826025.1| foldase protein PrsA [Streptococcus pneumoniae SP11-BS70]
gi|149002530|ref|ZP_01827464.1| competence protein CoiA [Streptococcus pneumoniae SP14-BS69]
gi|14972453|gb|AAK75099.1| competence protein CoiA [Streptococcus pneumoniae TIGR4]
gi|147755583|gb|EDK62630.1| foldase protein PrsA [Streptococcus pneumoniae SP11-BS70]
gi|147759467|gb|EDK66459.1| competence protein CoiA [Streptococcus pneumoniae SP14-BS69]
gi|147923112|gb|EDK74227.1| competence protein CoiA [Streptococcus pneumoniae SP3-BS71]
gi|147926104|gb|EDK77178.1| competence protein CoiA [Streptococcus pneumoniae SP6-BS73]
Length = 317
Score = 582 bits (1501), Expect = e-165, Method: Composition-based stats.
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE
Sbjct: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS
Sbjct: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ
Sbjct: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
Sbjct: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
Query: 241 KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK 300
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK
Sbjct: 241 KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK 300
Query: 301 LYPPAFYQQYFLKNMVE 317
LYPPAFYQQYFLKNMVE
Sbjct: 301 LYPPAFYQQYFLKNMVE 317
>gi|149010375|ref|ZP_01831746.1| foldase protein PrsA [Streptococcus pneumoniae SP19-BS75]
gi|147764856|gb|EDK71785.1| foldase protein PrsA [Streptococcus pneumoniae SP19-BS75]
Length = 317
Score = 582 bits (1500), Expect = e-165, Method: Composition-based stats.
Identities = 316/317 (99%), Positives = 317/317 (100%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
MFVARDARGELVNVLEDKLEKQAYTCPACGGQ+HLRQGPSVRTHFAHKSLKDCDFFFENE
Sbjct: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS
Sbjct: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ
Sbjct: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
Sbjct: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
Query: 241 KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK 300
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK
Sbjct: 241 KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK 300
Query: 301 LYPPAFYQQYFLKNMVE 317
LYPPAFYQQYFLKNMVE
Sbjct: 301 LYPPAFYQQYFLKNMVE 317
>gi|149019570|ref|ZP_01834889.1| competence protein CoiA [Streptococcus pneumoniae SP23-BS72]
gi|147930945|gb|EDK81925.1| competence protein CoiA [Streptococcus pneumoniae SP23-BS72]
Length = 317
Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats.
Identities = 316/317 (99%), Positives = 317/317 (100%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE
Sbjct: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
SPEHLANKESLYHWLKKETK+QLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS
Sbjct: 61 SPEHLANKESLYHWLKKETKIQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ
Sbjct: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
Sbjct: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
Query: 241 KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK 300
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK
Sbjct: 241 KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK 300
Query: 301 LYPPAFYQQYFLKNMVE 317
LYPPAFYQQYFLKNMVE
Sbjct: 301 LYPPAFYQQYFLKNMVE 317
>gi|15902925|ref|NP_358475.1| Competence protein [Streptococcus pneumoniae R6]
gi|116516258|ref|YP_816347.1| competence protein CoiA [Streptococcus pneumoniae D39]
gi|15458486|gb|AAK99685.1| Competence protein [Streptococcus pneumoniae R6]
gi|116076834|gb|ABJ54554.1| competence protein CoiA [Streptococcus pneumoniae D39]
Length = 317
Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats.
Identities = 315/317 (99%), Positives = 316/317 (99%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE
Sbjct: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS
Sbjct: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDK KQVLRLKYLIYQ
Sbjct: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKGKQVLRLKYLIYQ 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
DLRGKLHYQIKEFSYGQGSLLEILRLPYK+QKISHFTVSEDKDICRYIRQQLYYQNLFWM
Sbjct: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKKQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
Query: 241 KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK 300
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK
Sbjct: 241 KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK 300
Query: 301 LYPPAFYQQYFLKNMVE 317
LYPPAFYQQYFLKNMVE
Sbjct: 301 LYPPAFYQQYFLKNMVE 317
>gi|149006343|ref|ZP_01830055.1| foldase protein PrsA [Streptococcus pneumoniae SP18-BS74]
gi|147762120|gb|EDK69082.1| foldase protein PrsA [Streptococcus pneumoniae SP18-BS74]
Length = 317
Score = 579 bits (1493), Expect = e-164, Method: Composition-based stats.
Identities = 312/317 (98%), Positives = 316/317 (99%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
MFVARD RGELVNVLEDKLEKQAYTCPACGGQ+HLRQGPSVRTHFAHKSLKDCDFFFENE
Sbjct: 1 MFVARDTRGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
SPEH+ANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS
Sbjct: 61 SPEHIANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ
Sbjct: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
Sbjct: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
Query: 241 KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQK 300
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYY++FYTYYQKNPQNDWQK
Sbjct: 241 KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYRNFYTYYQKNPQNDWQK 300
Query: 301 LYPPAFYQQYFLKNMVE 317
LYPPAFYQQYFLKNMVE
Sbjct: 301 LYPPAFYQQYFLKNMVE 317
>gi|3211759|gb|AAC23746.1| competence protein [Streptococcus pneumoniae]
Length = 266
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 255/266 (95%), Positives = 257/266 (96%), Gaps = 1/266 (0%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE
Sbjct: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCS-PLPQKVLKER 119
SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALE P +KVLKER
Sbjct: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALESSVVVPCLKKVLKER 120
Query: 120 SEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIY 179
SEGYRSQGYQVLWLLGQKLWLKERLTRLQ GFLYFSQNMGFYVWELDK KQVLRLKYLIY
Sbjct: 121 SEGYRSQGYQVLWLLGQKLWLKERLTRLQAGFLYFSQNMGFYVWELDKGKQVLRLKYLIY 180
Query: 180 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFW 239
QDLRGKLHYQIKEFSYGQGSLLEILRLPYK+QKISHFTVSEDKDICRYIRQQLYYQNLFW
Sbjct: 181 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKKQKISHFTVSEDKDICRYIRQQLYYQNLFW 240
Query: 240 MKEQAEAYQKGENILTYGLKEWYPQI 265
MKEQAEAYQKGENILTYGLKEWYPQI
Sbjct: 241 MKEQAEAYQKGENILTYGLKEWYPQI 266
>gi|146318898|ref|YP_001198610.1| Competence protein [Streptococcus suis 05ZYH33]
gi|146321107|ref|YP_001200818.1| Competence protein [Streptococcus suis 98HAH33]
gi|145689704|gb|ABP90210.1| Competence protein [Streptococcus suis 05ZYH33]
gi|145691913|gb|ABP92418.1| Competence protein [Streptococcus suis 98HAH33]
Length = 313
Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats.
Identities = 161/312 (51%), Positives = 217/312 (69%), Gaps = 4/312 (1%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M VA D G++ NVLE+ + +++CP CGG + + G +R+HFAH +L+DC +F ENE
Sbjct: 1 MLVALDEDGQVFNVLENPAPQGSFSCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFSENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
S +HL+ K LY WL +V+LE L+ + Q+AD+FVN +LALEVQCS LP L+ R+
Sbjct: 61 SAQHLSLKSCLYRWLVNAEQVELEKCLTSIGQVADLFVNNSLALEVQCSGLPISRLQLRT 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
+ Y GYQVLWLLG+ LWLKERLT L + FL FS NMGF++WELD EK+ LRL+YLI++
Sbjct: 121 QAYSEAGYQVLWLLGKDLWLKERLTNLHKQFLSFSMNMGFHLWELDDEKKELRLRYLIHE 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
DLRGK+H K F +G+G+LL+ILRLP+ +Q +SH T D+D+ RYI QQLYY++ W+
Sbjct: 181 DLRGKVHCLTKVFPFGEGNLLDILRLPFAKQALSHLTCPLDRDLPRYIAQQLYYKSPNWL 240
Query: 241 KEQAEAYQKGENILTYGLKEWYPQI---RPIVGKFFQIEQDLTSYYQHFYTYYQKNPQND 297
QAE+Y +GEN+LT +EWYP I R +G F QI++DLT YQ F YY
Sbjct: 241 ALQAESYSRGENLLTKTAEEWYPHIRLPRSAIG-FAQIQKDLTLVYQDFDQYYGNIEDKQ 299
Query: 298 WQKLYPPAFYQQ 309
Q LYPP Y++
Sbjct: 300 KQVLYPPIIYRK 311
>gi|125717599|ref|YP_001034732.1| Competence protein, putative [Streptococcus sanguinis SK36]
gi|125497516|gb|ABN44182.1| Competence protein, putative [Streptococcus sanguinis SK36]
Length = 316
Score = 313 bits (801), Expect = 1e-83, Method: Composition-based stats.
Identities = 167/310 (53%), Positives = 223/310 (71%), Gaps = 2/310 (0%)
Query: 1 MFVARDARGELVNVLEDKLEKQA-YTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
MFVAR+ +G L N LE+K+EK A + CPAC G + ++G ++ HFAH SL+ C F+ EN
Sbjct: 1 MFVARNHKGLLCNALEEKIEKGADFVCPACSGAVRFKKGKVMQPHFAHVSLEQCSFYREN 60
Query: 60 ESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
ES EHL K L+ W + +V++E L L+QIAD+ V+ LALEVQCS L + L+ER
Sbjct: 61 ESAEHLNLKAELFRWAVQTEEVEVEAFLPALQQIADLLVDEKLALEVQCSLLSIERLQER 120
Query: 120 SEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIY 179
+ YR GYQVLWLLG+KLWLK+ LTRLQ+ FLYFS+NMGF++WELD+EKQVLRLKYLI+
Sbjct: 121 TLSYRQHGYQVLWLLGRKLWLKDSLTRLQKDFLYFSKNMGFHLWELDQEKQVLRLKYLIH 180
Query: 180 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFW 239
+DL GK+ ++ K F +G G LL+ILRLP+++Q+++ F +D IC YIR+QLYYQ W
Sbjct: 181 EDLHGKVQHKTKNFPFGHGQLLDILRLPFQKQEMNSFLAQQDPQICSYIRRQLYYQQPRW 240
Query: 240 MKEQAEAYQKGENILTYGLKEWYPQIRPI-VGKFFQIEQDLTSYYQHFYTYYQKNPQNDW 298
M+ QA+ YQ G+N+LT +++YPQ+RPI F QI DLT YYQ F YY Q +
Sbjct: 241 MRLQAQLYQAGDNLLTKAAEDFYPQVRPIQATSFCQITTDLTDYYQQFENYYANLQQKNL 300
Query: 299 QKLYPPAFYQ 308
Q +Y PAFY+
Sbjct: 301 QIVYSPAFYE 310
>gi|81096865|ref|ZP_00875192.1| Competence CoiA-like [Streptococcus suis 89/1591]
gi|80977087|gb|EAP40643.1| Competence CoiA-like [Streptococcus suis 89/1591]
Length = 313
Score = 310 bits (795), Expect = 6e-83, Method: Composition-based stats.
Identities = 159/312 (50%), Positives = 215/312 (68%), Gaps = 4/312 (1%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M VA D G++ NVLE+ + Y+CP CGG + + G +R+HFAH +L+DC +F ENE
Sbjct: 1 MLVALDEDGQVFNVLENPAPQGRYSCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFSENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
S +HL+ K LY WL +V+LE L + Q+AD+FVN +LALEVQCS LP L+ R+
Sbjct: 61 SAQHLSLKSCLYSWLINAEQVELEKCLPSIGQVADLFVNNSLALEVQCSSLPISRLQLRT 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
+ Y G QVLWLLG+ LW+KERL++L + FL FS NMGF++WELD EK+ LRL+YLI++
Sbjct: 121 QAYHEAGLQVLWLLGKGLWIKERLSKLHKQFLSFSMNMGFHLWELDDEKKELRLRYLIHE 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
DLRGK+H K F +G+G+LL+ILRLP+ +Q +SH T D+D+ RYI QQLYY++ W+
Sbjct: 181 DLRGKVHCLTKVFPFGEGNLLDILRLPFAKQALSHLTFPLDRDLPRYIAQQLYYRSPNWL 240
Query: 241 KEQAEAYQKGENILTYGLKEWYPQI---RPIVGKFFQIEQDLTSYYQHFYTYYQKNPQND 297
QAE+Y +GEN+LT +EWYP I R +G F QI++DLT YQ F YY
Sbjct: 241 TLQAESYSRGENLLTKTAEEWYPHIRLPRSAIG-FAQIQKDLTLVYQDFDQYYGNIEDKQ 299
Query: 298 WQKLYPPAFYQQ 309
Q LYPP Y++
Sbjct: 300 KQVLYPPIIYRK 311
>gi|157074777|gb|ABV09460.1| competence protein CoiA [Streptococcus gordonii str. Challis
substr. CH1]
Length = 317
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 169/310 (54%), Positives = 224/310 (72%), Gaps = 3/310 (0%)
Query: 1 MFVARDARGELVNVL-EDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
MF ARD G+++++L E L K Y CP CGG + L++G ++ HFAH L DC + EN
Sbjct: 1 MFSARDKNGKILHLLKESSLSKGDYFCPECGGPVRLKKGKIMQPHFAHIRLSDCHYSVEN 60
Query: 60 ESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
ES EHL K +L+ W + T+V +E L +L+Q+ADV V+ LALEVQCS L Q L ER
Sbjct: 61 ESKEHLNLKAALFRWANQTTRVDVEVFLPDLQQVADVLVDERLALEVQCSSLSQDRLWER 120
Query: 120 SEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIY 179
S+ YR GYQVLWLLG+KLWL++ LT LQ+ FLYFSQNMGF++WELD+E+++LRLKYLI+
Sbjct: 121 SQRYRQAGYQVLWLLGKKLWLRQTLTPLQKQFLYFSQNMGFHIWELDEERKMLRLKYLIH 180
Query: 180 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFW 239
+DL G+L Y+ KEF + +G LL+ILRLP+ +Q++S F V D DIC YIRQQLYY+N W
Sbjct: 181 EDLHGQLQYKEKEFPFEKGKLLDILRLPFSKQEMSSFFVKSDPDICHYIRQQLYYRNPKW 240
Query: 240 MKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--FFQIEQDLTSYYQHFYTYYQKNPQND 297
MK QA YQK +N+LT +E+YPQ+RPI QI QDL++YY++F YY +P
Sbjct: 241 MKIQASYYQKEKNLLTMSREEFYPQVRPIRSDQPLCQISQDLSAYYENFQRYYHHSPDKK 300
Query: 298 WQKLYPPAFY 307
+Q +YPPAFY
Sbjct: 301 YQIVYPPAFY 310
>gi|25010878|ref|NP_735273.1| hypothetical protein gbs0823 [Streptococcus agalactiae NEM316]
gi|77413139|ref|ZP_00789339.1| competence protein CoiA [Streptococcus agalactiae 515]
gi|23095257|emb|CAD46467.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160840|gb|EAO71951.1| competence protein CoiA [Streptococcus agalactiae 515]
Length = 315
Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats.
Identities = 155/316 (49%), Positives = 211/316 (66%), Gaps = 3/316 (0%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M +A+D +G L+N+LE K Y CP C + L+ G +R HFAH SLK+C F+ ENE
Sbjct: 1 MLIAKDRQGNLINLLESHPGKGQYFCPTCCSAVRLKAGRIMRRHFAHISLKNCQFYHENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
S EHL K LY L +E + LE+ L E+ QIAD+FVN LALEVQCS L ++ L+ER+
Sbjct: 61 SNEHLQLKAKLYMSLSRENETMLEHHLPEINQIADLFVNETLALEVQCSRLSEQRLRERT 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
+ Y +QV WLLG+KLWLK+RLT L + FL FSQ++GF++WELD +VLRLKYLIY+
Sbjct: 121 KAYLQADFQVRWLLGEKLWLKDRLTNLHKQFLQFSQSIGFHIWELDLRLEVLRLKYLIYE 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
DLRG ++Y K G +L L+ PY+ + ++ + V +D++I Y+RQQL Y N FW+
Sbjct: 181 DLRGHVYYLSKTCPL-SGDVLAFLKWPYQSKNLNFYKVKQDRNIRDYVRQQLRYGNQFWL 239
Query: 241 KEQAEAYQKGENILTYGLKEWYPQIRP--IVGKFFQIEQDLTSYYQHFYTYYQKNPQNDW 298
++Q +AY G+N+LT L ++PQI+P + F QI LTS+YQ+F YYQKN N
Sbjct: 240 RKQEKAYLSGQNLLTQELMMFFPQIQPPRVDTDFCQITNSLTSFYQNFTNYYQKNKNNLD 299
Query: 299 QKLYPPAFYQQYFLKN 314
Q LYPP FY + KN
Sbjct: 300 QTLYPPVFYDKIVTKN 315
>gi|22536968|ref|NP_687819.1| competence protein CoiA [Streptococcus agalactiae 2603V/R]
gi|76788002|ref|YP_329550.1| competence protein CoiA, putative [Streptococcus agalactiae A909]
gi|77411339|ref|ZP_00787687.1| competence protein CoiA [Streptococcus agalactiae CJB111]
gi|22533822|gb|AAM99691.1|AE014228_12 competence protein CoiA [Streptococcus agalactiae 2603V/R]
gi|76563059|gb|ABA45643.1| competence protein CoiA, putative [Streptococcus agalactiae A909]
gi|77162599|gb|EAO73562.1| competence protein CoiA [Streptococcus agalactiae CJB111]
Length = 315
Score = 283 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 155/316 (49%), Positives = 210/316 (66%), Gaps = 3/316 (0%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M +A+D +G L+N+LE K Y CP C + L+ G +R HFAH SLK+C F+ ENE
Sbjct: 1 MLIAKDKQGNLINLLESHPGKGQYFCPTCCSAVRLKAGRIMRRHFAHISLKNCQFYHENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
S EHL K LY L +E + LE+ L E+ QIAD+FVN LALEVQCS L ++ L+ER+
Sbjct: 61 SNEHLQLKAKLYMSLSRENETMLEHHLPEINQIADLFVNETLALEVQCSRLSEQRLRERT 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
+ Y +QV WLLG+KLWLK RLT L + FL FSQ++GF++WELD +VLRLKYLIY+
Sbjct: 121 KAYLQADFQVRWLLGEKLWLKHRLTNLHKQFLQFSQSIGFHIWELDLRLEVLRLKYLIYE 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
DLRG ++Y K G +L L+ PY+ + ++ + V +D++I Y+RQQL Y N FW+
Sbjct: 181 DLRGHVYYLSKTCPL-SGDVLAFLKWPYQSKNLNFYKVKQDRNIRDYVRQQLRYGNQFWL 239
Query: 241 KEQAEAYQKGENILTYGLKEWYPQIRP--IVGKFFQIEQDLTSYYQHFYTYYQKNPQNDW 298
++Q +AY G+N+LT L ++PQI+P + F QI LTS+YQ+F YYQKN N
Sbjct: 240 RKQEKAYLSGQNLLTQELMMFFPQIQPPRVDTDFCQITNSLTSFYQNFTNYYQKNKNNLD 299
Query: 299 QKLYPPAFYQQYFLKN 314
Q LYPP FY + KN
Sbjct: 300 QTLYPPVFYDKIVTKN 315
>gi|77409623|ref|ZP_00786297.1| competence protein CoiA [Streptococcus agalactiae COH1]
gi|77171769|gb|EAO74964.1| competence protein CoiA [Streptococcus agalactiae COH1]
Length = 315
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 155/316 (49%), Positives = 209/316 (66%), Gaps = 3/316 (0%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M +A+D +G L+N+LE K Y CP C + L+ G +R HFAH SLK+C F ENE
Sbjct: 1 MLIAKDKQGNLINLLESHPGKGQYFCPTCCSAVRLKAGRIMRRHFAHISLKNCQFHHENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
S EHL K LY L +E + LE+ L E+ QIAD+FVN LALEVQCS L ++ L+ER+
Sbjct: 61 SNEHLQLKAKLYMSLSRENETMLEHHLPEINQIADLFVNETLALEVQCSRLSEQRLRERT 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
+ Y +QV WLLG+KLWLK RLT L + FL FSQ++GF++WELD +VLRLKYLIY+
Sbjct: 121 KAYLQADFQVRWLLGEKLWLKHRLTNLHKQFLQFSQSIGFHIWELDLRLEVLRLKYLIYE 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
DLRG ++Y K G +L L+ PY+ + ++ + V +D++I Y+RQQL Y N FW+
Sbjct: 181 DLRGHVYYLSKTCPL-SGDVLAFLKWPYQSKNLNFYKVKQDRNIRDYVRQQLRYGNQFWL 239
Query: 241 KEQAEAYQKGENILTYGLKEWYPQIRP--IVGKFFQIEQDLTSYYQHFYTYYQKNPQNDW 298
++Q +AY G+N+LT L ++PQI+P + F QI LTS+YQ+F YYQKN N
Sbjct: 240 RKQEKAYLSGQNLLTQELMMFFPQIQPPRVDTDFCQITNSLTSFYQNFTNYYQKNKNNLD 299
Query: 299 QKLYPPAFYQQYFLKN 314
Q LYPP FY + KN
Sbjct: 300 QTLYPPVFYDKIVTKN 315
>gi|77406564|ref|ZP_00783613.1| competence protein CoiA [Streptococcus agalactiae H36B]
gi|77174817|gb|EAO77637.1| competence protein CoiA [Streptococcus agalactiae H36B]
Length = 315
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 154/316 (48%), Positives = 209/316 (66%), Gaps = 3/316 (0%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M +A+D +G L+N+LE K Y CP C + L+ G +R HF H SLK+C F+ ENE
Sbjct: 1 MLIAKDKQGNLINLLESHPGKGQYFCPTCCSAVRLKAGRIMRRHFTHISLKNCQFYHENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
S EHL K LY L +E + LE+ L E+ QIAD+FVN LALEVQCS L ++ L+ER+
Sbjct: 61 SNEHLQLKAKLYMSLSRENETMLEHHLPEINQIADLFVNETLALEVQCSRLSEQRLRERT 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
+ Y +QV WLLG+KLWLK RLT L + FL FSQ++GF++WELD +VLRLKYLIY+
Sbjct: 121 KAYLQADFQVRWLLGEKLWLKHRLTNLHKQFLQFSQSIGFHIWELDLRLEVLRLKYLIYE 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
DLRG ++Y K G +L L+ PY+ + ++ + V +D++I Y+RQQL Y N FW+
Sbjct: 181 DLRGHVYYLSKTCPL-SGDVLAFLKWPYQSKNLNFYKVXQDRNIRDYVRQQLRYGNQFWL 239
Query: 241 KEQAEAYQKGENILTYGLKEWYPQIRP--IVGKFFQIEQDLTSYYQHFYTYYQKNPQNDW 298
++Q +AY G+N+LT L ++PQI+P + F QI LTS+YQ+F YYQKN N
Sbjct: 240 RKQEKAYLSGQNLLTQELMMFFPQIQPPRVDTDFCQITNSLTSFYQNFTNYYQKNKNNLD 299
Query: 299 QKLYPPAFYQQYFLKN 314
Q LYPP FY + KN
Sbjct: 300 QTLYPPVFYDKIVTKN 315
>gi|24379117|ref|NP_721072.1| putative competence protein/transcription factor [Streptococcus
mutans UA159]
gi|24377020|gb|AAN58378.1|AE014908_4 putative competence protein/transcription factor [Streptococcus
mutans UA159]
Length = 312
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 142/311 (45%), Positives = 208/311 (66%), Gaps = 3/311 (0%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M VARD G+L+N+L +K + CPAC + L+ G +R HFAH +L+DC F+ ENE
Sbjct: 1 MLVARDKNGKLINLLNGIPDKSDFYCPACQSPVRLKNGRVMRPHFAHVALQDCKFYSENE 60
Query: 61 SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS 120
S EHL K LY L + V++E + E +QIAD+ VN NLALEVQCS L + L ER+
Sbjct: 61 SAEHLNLKAELYQSLSQTESVEIEKVIPEPEQIADLLVNHNLALEVQCSRLSEARLCERT 120
Query: 121 EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
+ Y++ GYQVLWLLG+KLWL RL+ L + FLYFSQNMGF++WELD ++ LRLKYLIY+
Sbjct: 121 QAYQANGYQVLWLLGEKLWLDRRLSNLHKQFLYFSQNMGFHLWELDINRRELRLKYLIYE 180
Query: 181 DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM 240
D+ GK++YQ + S+ G+++ L+LPY +Q ++ + V + + + I++QL +N W+
Sbjct: 181 DIFGKVYYQTRSCSF-DGNIMTFLQLPYAKQTLTSYPVHQRRQVGLAIQKQLLARNPRWL 239
Query: 241 KEQAEAYQKGENILTYGLKEWYPQIR-PIVGK-FFQIEQDLTSYYQHFYTYYQKNPQNDW 298
++Q AY +G N++ +++PQ+R P + F QI QD++ + F+ YYQK +
Sbjct: 240 RQQELAYSQGRNLIAQSDADFFPQVRLPQCSRGFCQINQDVSHFSAAFFQYYQKQKDKEI 299
Query: 299 QKLYPPAFYQQ 309
Q LYPPAFY +
Sbjct: 300 QTLYPPAFYDK 310
>gi|55822427|ref|YP_140868.1| competence protein, transcription factor [Streptococcus
thermophilus CNRZ1066]
gi|55738412|gb|AAV62053.1| competence protein, transcription factor [Streptococcus
thermophilus CNRZ1066]
Length = 347
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 141/313 (45%), Positives = 207/313 (66%), Gaps = 5/313 (1%)
Query: 1 MFVARDARGELVNVLEDKLEKQ-AYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
M +A++ +G LV+ LE+ L ++ Y CP C G + LRQG + HFAHKSL+DC FF EN
Sbjct: 29 MLIAKNQKGLLVSALENGLNREETYRCPGCQGIVLLRQGKVICPHFAHKSLQDCQFFSEN 88
Query: 60 ESPEHLANKESLYHWLKKE-TKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKE 118
ES +HL+ K ++Y L +V +E L EL QIAD+FV +LALEVQCS L QK L+E
Sbjct: 89 ESAQHLSLKATVYQSLDNHGERVCIEKVLPELGQIADLFVGDSLALEVQCSRLSQKRLRE 148
Query: 119 RSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLI 178
R+ Y GY+V WLLGQ+LWL +RLT LQ+ FLYF+ +GF++WELD E++ +RLKYLI
Sbjct: 149 RTLAYHQIGYEVRWLLGQELWLGQRLTDLQRDFLYFTTKIGFHLWELDWEREEIRLKYLI 208
Query: 179 YQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLF 238
Y+D+ G+++Y K +S + +L+ ILR PY+ +K+ + V++ K + I+++L +N
Sbjct: 209 YEDIFGRVYYLTKTWSLIE-NLMTILRFPYQARKVETYQVTQRKKVSHVIQRELMGKNPR 267
Query: 239 WMKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--FFQIEQDLTSYYQHFYTYYQKNPQN 296
WM+ Q EAY KG N+L+ ++++PQ+R K F QI + + + F YY+K +
Sbjct: 268 WMRRQEEAYLKGMNLLSLSDQDFFPQVRFPESKHGFVQIRLSIDGFEKLFMQYYRKRDFS 327
Query: 297 DWQKLYPPAFYQQ 309
Q L PP FY +
Sbjct: 328 YKQTLCPPNFYAK 340
>gi|15673710|ref|NP_267884.1| CoiA [Lactococcus lactis subsp. lactis Il1403]
gi|12724747|gb|AAK05826.1|AE006403_4 competence protein CoiA [Lactococcus lactis subsp. lactis Il1403]
Length = 329
Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats.
Identities = 140/322 (43%), Positives = 205/322 (63%), Gaps = 20/322 (6%)
Query: 1 MFVARDARGELVNVLEDKLEKQA--YTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFE 58
M A D G++VN+LE ++++ Y CP+C +L ++ G HFAHKSLK CD + E
Sbjct: 1 MLTAIDENGQVVNLLEIEVKELTGKYFCPSCKSELFIKNGEIKMPHFAHKSLKACDLWLE 60
Query: 59 NESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKE 118
NES +HL K++LY W KK KV++E + E KQ D+ VN +A+E+QCS L K LKE
Sbjct: 61 NESEQHLGLKKALYQWFKKTDKVEIEAYIPEFKQRPDLLVNDTIAIEIQCSHLSMKRLKE 120
Query: 119 RSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLI 178
R+E Y+ G+ VLWL+GQ LWLK+++T LQ+ +YFS+N GFY WELD + Q +RLK LI
Sbjct: 121 RTENYQVHGFTVLWLMGQDLWLKDQITELQKNLVYFSENRGFYYWELDFKAQKMRLKSLI 180
Query: 179 YQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLF 238
++DLRGK+ Y +E +G+G L+E LRLP+ QK+ + D + +IR+QLYY +
Sbjct: 181 HEDLRGKIIYLQEEIPFGEGRLIEQLRLPFLSQKLLTIPLIVDLKLAEFIRRQLYYCSPK 240
Query: 239 WMKEQAEAYQKGENILTYGLKEWYPQIRPI-------------VGKFFQIEQDLTSYYQH 285
W+K Q + YQ+GEN+L + + I P+ + KF QI+Q++ YY++
Sbjct: 241 WLKLQEKYYQRGENLLNLTFERSF--IAPLGLNLLEVFDDEIPLHKFTQIKQNINLYYEN 298
Query: 286 FYTYYQKNPQNDWQKLYPPAFY 307
F +Q QN ++ +YPP FY
Sbjct: 299 FLINFQ---QNSFKAVYPPRFY 317
>gi|116627346|ref|YP_819965.1| Competence protein [Streptococcus thermophilus LMD-9]
gi|116100623|gb|ABJ65769.1| Competence protein [Streptococcus thermophilus LMD-9]
Length = 319
Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 141/313 (45%), Positives = 207/313 (66%), Gaps = 5/313 (1%)
Query: 1 MFVARDARGELVNVLEDKLEKQ-AYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
M +A++ +G LV+ LE+ L ++ Y CP C G + LRQG + HFAHKSL+DC FF EN
Sbjct: 1 MLIAKNQKGLLVSALENGLNREETYRCPGCQGIVLLRQGKVICPHFAHKSLQDCQFFSEN 60
Query: 60 ESPEHLANKESLYHWLKKE-TKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKE 118
ES +HL+ K ++Y L +V +E L EL QIAD+FV +LALEVQCS L QK L+E
Sbjct: 61 ESAQHLSLKATVYQSLDNHGERVCIEKVLPELGQIADLFVGDSLALEVQCSRLSQKRLRE 120
Query: 119 RSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLI 178
R+ Y GY+V WLLGQ+LWL +RLT LQ+ FLYF+ +GF++WELD E++ +RLKYLI
Sbjct: 121 RTLAYHQIGYEVRWLLGQELWLGQRLTDLQRDFLYFTTKIGFHLWELDWEREEIRLKYLI 180
Query: 179 YQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLF 238
Y+D+ G+++Y K +S + +L+ ILR PY+ +K+ + V++ K + I+++L +N
Sbjct: 181 YEDIFGRVYYLTKTWSLIE-NLMTILRFPYQARKVETYQVTQRKKVSHVIQRELMGKNPR 239
Query: 239 WMKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--FFQIEQDLTSYYQHFYTYYQKNPQN 296
WM+ Q EAY KG N+L+ ++++PQ+R K F QI + + + F YY+K +
Sbjct: 240 WMRRQEEAYLKGMNLLSLSDQDFFPQVRFPESKHGFVQIRLSIDGFEKLFMQYYRKRDFS 299
Query: 297 DWQKLYPPAFYQQ 309
Q L PP FY +
Sbjct: 300 YKQTLCPPNFYAK 312
>gi|55820536|ref|YP_138978.1| competence protein, transcription factor [Streptococcus
thermophilus LMG 18311]
gi|55736521|gb|AAV60163.1| competence protein, transcription factor [Streptococcus
thermophilus LMG 18311]
Length = 347
Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats.
Identities = 140/313 (44%), Positives = 207/313 (66%), Gaps = 5/313 (1%)
Query: 1 MFVARDARGELVNVLEDKLEKQ-AYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
M +A++ +G LV+ LE+ L ++ Y CP C G + LRQG + HFAHKSL+DC FF EN
Sbjct: 29 MLIAKNQKGLLVSALENGLNREETYRCPGCQGIVLLRQGKVICPHFAHKSLQDCQFFSEN 88
Query: 60 ESPEHLANKESLYHWLKKE-TKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKE 118
ES +HL+ K ++Y L +V +E L EL QIAD+FV +LALEVQCS L QK L+E
Sbjct: 89 ESAQHLSLKATVYQSLDNHGERVCIEKVLPELGQIADLFVGDSLALEVQCSRLSQKRLRE 148
Query: 119 RSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLI 178
R+ Y GY+V WLLGQ+LWL +RLT LQ+ FLYF+ +GF++WELD +++ +RLKYLI
Sbjct: 149 RTLAYHQIGYEVRWLLGQELWLGQRLTDLQRDFLYFTTKIGFHLWELDWKREEIRLKYLI 208
Query: 179 YQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLF 238
Y+D+ G+++Y K +S + +L+ ILR PY+ +K+ + V++ K + I+++L +N
Sbjct: 209 YEDIFGRVYYLTKTWSLIE-NLMTILRFPYQARKVETYQVTQRKKVSHVIQRELMGKNPR 267
Query: 239 WMKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--FFQIEQDLTSYYQHFYTYYQKNPQN 296
WM+ Q EAY KG N+L+ ++++PQ+R K F QI + + + F YY+K +
Sbjct: 268 WMRRQEEAYLKGMNLLSLSDQDFFPQVRFPESKHGFVQIRLSIDGFEKLFMQYYRKRDFS 327
Query: 297 DWQKLYPPAFYQQ 309
Q L PP FY +
Sbjct: 328 YKQTLCPPNFYAK 340
>gi|1771202|emb|CAA68043.1| transcription factor [Lactococcus lactis]
Length = 327
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 141/322 (43%), Positives = 203/322 (63%), Gaps = 20/322 (6%)
Query: 1 MFVARDARGELVNVLE-DKLEKQA-YTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFE 58
M A D +++N+LE D+ E + CP+C +L ++ G HFAHKSLK C+ + E
Sbjct: 1 MLTAIDENNKIINLLELDRKELTGKFYCPSCHSELLIKNGQIKVLHFAHKSLKSCNLWLE 60
Query: 59 NESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKE 118
NES +HL K+ LY W KK KV++E L EL Q D+ VNG +A+E+QCS L K LKE
Sbjct: 61 NESDQHLGLKKILYEWFKKTDKVEIERYLPELNQRPDLLVNGKIAIEIQCSHLSIKRLKE 120
Query: 119 RSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLI 178
R+E Y++ G++VLWL+G+ LWL E++T LQ+ +YFS+N GF+ WELD +++ LRLK LI
Sbjct: 121 RTENYKAHGFKVLWLMGKDLWLAEQVTELQKNLVYFSENRGFFYWELDFQRKKLRLKSLI 180
Query: 179 YQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLF 238
++DLRG++ +E +G+G L+ LRLPY QK+ +D + +IRQQLYYQ+
Sbjct: 181 HEDLRGRIICLQEEIPFGKGRLIAHLRLPYLAQKLVKIPTFKDSKLSSFIRQQLYYQSPK 240
Query: 239 WMKEQAEAYQKGENILTYGLKEWYPQIRPI-------------VGKFFQIEQDLTSYYQH 285
WMK Q + YQKGEN+LT + P I P+ + F QI+Q++ YY++
Sbjct: 241 WMKIQEKYYQKGENLLTKKFEG--PYIAPLGLNLLENFTDEMTITTFTQIDQNVKLYYEN 298
Query: 286 FYTYYQKNPQNDWQKLYPPAFY 307
F +Q+ N + LYPP FY
Sbjct: 299 FLINFQR---NSLEMLYPPRFY 317
>gi|116512583|ref|YP_811490.1| Competence protein [Lactococcus lactis subsp. cremoris SK11]
gi|116108237|gb|ABJ73377.1| Competence protein [Lactococcus lactis subsp. cremoris SK11]
Length = 327
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 139/324 (42%), Positives = 203/324 (62%), Gaps = 24/324 (7%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYT----CPACGGQLHLRQGPSVRTHFAHKSLKDCDFF 56
M A D +++N+LE LE++ T CP+C +L ++ G HFAHKSLK C+ +
Sbjct: 1 MLTAIDENNKIINLLE--LERKELTGKFYCPSCHAELLIKNGQIKVLHFAHKSLKSCNLW 58
Query: 57 FENESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVL 116
ENES +HL K+ LY W K+ KV++E L EL Q D+ VN +A+E+QCS L K L
Sbjct: 59 LENESEQHLGLKKILYQWFKRTDKVEIERYLPELNQRPDLLVNDKIAIEIQCSHLSIKRL 118
Query: 117 KERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKY 176
KER+E Y++ G++VLWL+G+ L L E++T+LQ+ +YFS+N GF+ WELD +++ LRLK
Sbjct: 119 KERTENYKAHGFKVLWLMGKDLRLAEQVTKLQKNLVYFSENRGFFYWELDFQRKKLRLKS 178
Query: 177 LIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQN 236
LI++DLRG++ +E +G+G L+ LRLPY QK+ +D + +IRQQLYYQ+
Sbjct: 179 LIHEDLRGRIICLQEEIPFGKGRLIAHLRLPYLAQKLVKIPTFKDPKLSSFIRQQLYYQS 238
Query: 237 LFWMKEQAEAYQKGENILTYGLKEWYPQIRPI-------------VGKFFQIEQDLTSYY 283
WMK Q + YQKGEN+LT + P I P+ + F QI+Q++ YY
Sbjct: 239 PKWMKIQEKYYQKGENLLTKKFEG--PYIAPLGLNLLESFTDEMTITTFTQIDQNVKLYY 296
Query: 284 QHFYTYYQKNPQNDWQKLYPPAFY 307
++F +Q+ N + LYPP FY
Sbjct: 297 ENFLINFQR---NSLEMLYPPCFY 317
>gi|94988814|ref|YP_596915.1| putative competence protein/transcription factor [Streptococcus
pyogenes MGAS9429]
gi|94992700|ref|YP_600799.1| Putative competence protein/transcription factor [Streptococcus
pyogenes MGAS2096]
gi|94542322|gb|ABF32371.1| putative competence protein/transcription factor [Streptococcus
pyogenes MGAS9429]
gi|94546208|gb|ABF36255.1| Putative competence protein/transcription factor [Streptococcus
pyogenes MGAS2096]
Length = 320
Score = 230 bits (586), Expect = 9e-59, Method: Composition-based stats.
Identities = 130/310 (41%), Positives = 189/310 (60%), Gaps = 4/310 (1%)
Query: 1 MFVARDARGELVNVLEDKLE-KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
+ A D + +L++++ + K + CPAC + LRQG R HFAH L C F EN
Sbjct: 4 ILTALDGKNQLISLVTQPISTKPPFCCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAEN 63
Query: 60 ESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
ES EHL K LY L + V +E L EL+QIAD++VN LALE+QCSPLP + LK+R
Sbjct: 64 ESEEHLTLKAKLYTSLVRTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKR 123
Query: 120 SEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIY 179
++ Y+ +GY V WLLG+KLWL LT LQ+ FLYFS ++GF++WELD +LRLKYLI+
Sbjct: 124 TKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSSSLGFHLWELDAAANLLRLKYLIH 183
Query: 180 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFW 239
+DL GK+ Y K S +++E+ RLPY+++ + + ++ + I++ L ++ W
Sbjct: 184 EDLFGKVSYLTKTISLDH-NIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHPKW 242
Query: 240 MKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--FFQIEQDLTSYYQHFYTYYQKNPQND 297
++ Q +AY G N+L +YPQ RP+ F QIE +L YY+ F YY+K
Sbjct: 243 LRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIEGNLRPYYESFKVYYKKEKDKK 302
Query: 298 WQKLYPPAFY 307
Q L+ P +Y
Sbjct: 303 VQTLFSPKYY 312
>gi|21910599|ref|NP_664867.1| putative competence protein [Streptococcus pyogenes MGAS315]
gi|21904800|gb|AAM79670.1| putative competence protein [Streptococcus pyogenes MGAS315]
Length = 320
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 129/310 (41%), Positives = 190/310 (61%), Gaps = 4/310 (1%)
Query: 1 MFVARDARGELVNVLEDKLE-KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
+ A D + +L++++ + K + CPAC + LRQG R+HFAH L C F EN
Sbjct: 4 ILTALDGKNQLISLVTQPISTKPPFRCPACKSPVRLRQGTIRRSHFAHVQLAHCQFQAEN 63
Query: 60 ESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
ES EHL K LY L + V +E L EL+QIAD+++N LALE+QCSPLP + LK+R
Sbjct: 64 ESEEHLTLKAKLYTSLVRTEAVCIEKYLPELQQIADLWMNDKLALEIQCSPLPVERLKKR 123
Query: 120 SEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIY 179
++ Y+ +GY V WLLG+KLWL LT LQ+ FLYFS ++GF++WELD +LRLKYLI+
Sbjct: 124 TKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSSSLGFHLWELDAAANLLRLKYLIH 183
Query: 180 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFW 239
+DL GK+ Y K S +++E+ RLPY+++ + + ++ + I++ L ++ W
Sbjct: 184 EDLFGKVSYLTKTISLDH-NIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHPKW 242
Query: 240 MKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--FFQIEQDLTSYYQHFYTYYQKNPQND 297
++ Q +AY G N+L +YPQ RP+ F QIE +L YY+ F YY+K
Sbjct: 243 LRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIEGNLRPYYESFKVYYKKEKDKK 302
Query: 298 WQKLYPPAFY 307
Q L+ P +Y
Sbjct: 303 VQTLFSPKYY 312
>gi|139473572|ref|YP_001128288.1| competence protein CoiA-like family protein [Streptococcus pyogenes
str. Manfredo]
gi|134271819|emb|CAM30053.1| competence protein CoiA-like family protein [Streptococcus pyogenes
str. Manfredo]
Length = 320
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 130/310 (41%), Positives = 189/310 (60%), Gaps = 4/310 (1%)
Query: 1 MFVARDARGELVNVLEDKLE-KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
+ A D R +L++++ + K + CPAC + LRQG R HFAH L C F EN
Sbjct: 4 ILTALDGRNQLISLVTQPISTKPPFRCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAEN 63
Query: 60 ESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
ES EHL K LY L + V +E L EL+QIAD++VN LALE+QCSPLP + LK+R
Sbjct: 64 ESEEHLTLKAKLYTSLVRTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKR 123
Query: 120 SEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIY 179
++ Y+ +GY V WLLG+KLWL LT LQ+ FLYFS ++GF++WELD +LRLKYLI+
Sbjct: 124 TKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSSSLGFHLWELDAAANLLRLKYLIH 183
Query: 180 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFW 239
+DL GK+ Y K S +++E+ RLPY+++ + + ++ + I++ L ++ W
Sbjct: 184 EDLFGKVSYLTKTISLDH-NIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHPKW 242
Query: 240 MKEQAEAYQKGENILTYGLKEWYPQIRPI--VGKFFQIEQDLTSYYQHFYTYYQKNPQND 297
++ Q +AY G N+L +YPQ RP+ F QI+ +L YY+ F YY+K
Sbjct: 243 LRRQEKAYLSGYNLLMLTTDAFYPQWRPVQFSSGFCQIKGNLRPYYESFKVYYKKEKDKK 302
Query: 298 WQKLYPPAFY 307
Q L+ P +Y
Sbjct: 303 VQTLFSPKYY 312
>gi|71903793|ref|YP_280596.1| putative competence protein/transcription factor [Streptococcus
pyogenes MGAS6180]
gi|71802888|gb|AAX72241.1| putative competence protein/transcription factor [Streptococcus
pyogenes MGAS6180]
Length = 320
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 129/310 (41%), Positives = 189/310 (60%), Gaps = 4/310 (1%)
Query: 1 MFVARDARGELVNVLEDKLE-KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
+ A D + +L++++ + K + CPAC + LRQG R HFAH L C F EN
Sbjct: 4 ILTALDGKNQLISLVTQPISTKPPFCCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAEN 63
Query: 60 ESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
ES EHL K LY L + V +E L EL+QIAD++VN LALE+QCSPLP + LK+R
Sbjct: 64 ESEEHLTLKAKLYTSLVRTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKR 123
Query: 120 SEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIY 179
++ Y+ +GY V WLLG+KLWL LT LQ+ FLYFS ++GF++WELD +LRLKYLI+
Sbjct: 124 TKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSSSLGFHLWELDAAANLLRLKYLIH 183
Query: 180 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFW 239
+DL GK+ Y K S +++E+ RLPY+++ + + ++ + I++ L ++ W
Sbjct: 184 EDLFGKVSYLTKTISLDH-NIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHPKW 242
Query: 240 MKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--FFQIEQDLTSYYQHFYTYYQKNPQND 297
++ Q +AY G N+L +YPQ RP+ F QI+ +L YY+ F YY+K
Sbjct: 243 LRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKVYYKKEKDKK 302
Query: 298 WQKLYPPAFY 307
Q L+ P +Y
Sbjct: 303 VQTLFSPKYY 312
>gi|19746360|ref|NP_607496.1| putative transcription factor [Streptococcus pyogenes MGAS8232]
gi|19748556|gb|AAL97995.1| putative transcription factor [Streptococcus pyogenes MGAS8232]
Length = 320
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 129/310 (41%), Positives = 190/310 (61%), Gaps = 4/310 (1%)
Query: 1 MFVARDARGELVNVLEDKLE-KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
+ A D + +L++++ + K + CPAC + LRQG R HFAH L C F EN
Sbjct: 4 ILTALDGKNQLISLVTQPISTKPPFRCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAEN 63
Query: 60 ESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
ES EHL K LY L + V +E L EL+QIAD++VN LALE+QCSPLP + LK+R
Sbjct: 64 ESEEHLTLKAKLYTSLVRTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKR 123
Query: 120 SEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIY 179
++ Y+ +GY V WLLG+KLWL LT LQ+ FLYFS ++GF++WELD +LRLKYLI+
Sbjct: 124 TKAYQEKGYPVGWLLGRKLWLNTHLTALQKQFLYFSSSLGFHLWELDAAANLLRLKYLIH 183
Query: 180 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFW 239
+DL GK+ Y K S +++E+ RLPY+++ + + ++ + I++ L ++ W
Sbjct: 184 EDLFGKVSYLTKTISLDH-NIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHPKW 242
Query: 240 MKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--FFQIEQDLTSYYQHFYTYYQKNPQND 297
++ Q +AY G N+L +YPQ RP+ F+QI+ +L YY+ F YY+K
Sbjct: 243 LRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFYQIKGNLRPYYESFKVYYKKEKDKK 302
Query: 298 WQKLYPPAFY 307
Q L+ P +Y
Sbjct: 303 VQTLFSPKYY 312
>gi|50914458|ref|YP_060430.1| Putative competence protein/transcription factor [Streptococcus
pyogenes MGAS10394]
gi|94994640|ref|YP_602738.1| Putative competence protein/transcription factor [Streptococcus
pyogenes MGAS10750]
gi|50903532|gb|AAT87247.1| Putative competence protein/transcription factor [Streptococcus
pyogenes MGAS10394]
gi|94548148|gb|ABF38194.1| Putative competence protein/transcription factor [Streptococcus
pyogenes MGAS10750]
Length = 320
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 129/310 (41%), Positives = 189/310 (60%), Gaps = 4/310 (1%)
Query: 1 MFVARDARGELVNVLEDKLE-KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
+ A D + +L++++ + K + CPAC + LRQG R HFAH L C F EN
Sbjct: 4 ILTALDGKNQLISLVTQPISTKPPFRCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAEN 63
Query: 60 ESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
ES EHL K LY L + V +E L EL+QIAD++VN LALE+QCSPLP + LK+R
Sbjct: 64 ESEEHLTLKAKLYTSLVRTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKR 123
Query: 120 SEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIY 179
++ Y+ +GY V WLLG+KLWL LT LQ+ FLYFS ++GF++WELD +LRLKYLI+
Sbjct: 124 TKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSSSLGFHLWELDAAANLLRLKYLIH 183
Query: 180 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFW 239
+DL GK+ Y K S +++E+ RLPY+++ + + ++ + I++ L ++ W
Sbjct: 184 EDLFGKVSYLTKTISLDH-NIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHPKW 242
Query: 240 MKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--FFQIEQDLTSYYQHFYTYYQKNPQND 297
++ Q +AY G N+L +YPQ RP+ F QI+ +L YY+ F YY+K
Sbjct: 243 LRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKVYYKKEKDKK 302
Query: 298 WQKLYPPAFY 307
Q L+ P +Y
Sbjct: 303 VQTLFSPKYY 312
>gi|15675318|ref|NP_269492.1| putative transcription factor [Streptococcus pyogenes M1 GAS]
gi|71910950|ref|YP_282500.1| putative competence protein/transcription factor [Streptococcus
pyogenes MGAS5005]
gi|13622497|gb|AAK34213.1| putative transcription factor [Streptococcus pyogenes M1 GAS]
gi|71853732|gb|AAZ51755.1| putative competence protein/transcription factor [Streptococcus
pyogenes MGAS5005]
Length = 320
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 129/310 (41%), Positives = 189/310 (60%), Gaps = 4/310 (1%)
Query: 1 MFVARDARGELVNVLEDKLE-KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
+ A D + +L++++ + K + CPAC + LRQG R HFAH L C F EN
Sbjct: 4 ILTALDDKNQLISLVTQPISTKPPFRCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAEN 63
Query: 60 ESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
ES EHL K LY L + V +E L EL+QIAD++VN LALE+QCSPLP + LK+R
Sbjct: 64 ESEEHLTLKAKLYTSLVRTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKR 123
Query: 120 SEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIY 179
++ Y+ +GY V WLLG+KLWL LT LQ+ FLYFS ++GF++WELD +LRLKYLI+
Sbjct: 124 TKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSSSLGFHLWELDAAANLLRLKYLIH 183
Query: 180 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFW 239
+DL GK+ Y K S +++E+ RLPY+++ + + ++ + I++ L ++ W
Sbjct: 184 EDLFGKVSYLTKTISLDH-NIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHPKW 242
Query: 240 MKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--FFQIEQDLTSYYQHFYTYYQKNPQND 297
++ Q +AY G N+L +YPQ RP+ F QI+ +L YY+ F YY+K
Sbjct: 243 LRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKVYYKKEKDKK 302
Query: 298 WQKLYPPAFY 307
Q L+ P +Y
Sbjct: 303 VQTLFSPKYY 312
>gi|56808352|ref|ZP_00366109.1| COG4469: Competence protein [Streptococcus pyogenes M49 591]
Length = 320
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 129/310 (41%), Positives = 189/310 (60%), Gaps = 4/310 (1%)
Query: 1 MFVARDARGELVNVLEDKLE-KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
+ A D + +L++++ + K + CPAC + LRQG R HFAH L C F EN
Sbjct: 4 ILTALDGKNQLISLVTQPISTKPPFRCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAEN 63
Query: 60 ESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
ES EHL K LY L + V +E L EL+QIAD++VN LALE+QCSPLP + LK+R
Sbjct: 64 ESEEHLTLKAKLYTSLVRIEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKR 123
Query: 120 SEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIY 179
++ Y+ +GY V WLLG+KLWL LT LQ+ FLYFS ++GF++WELD +LRLKYLI+
Sbjct: 124 TKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSSSLGFHLWELDAAANLLRLKYLIH 183
Query: 180 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFW 239
+DL GK+ Y K S +++E+ RLPY+++ + + ++ + I++ L ++ W
Sbjct: 184 EDLFGKVSYLTKTISLDH-NIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHPKW 242
Query: 240 MKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--FFQIEQDLTSYYQHFYTYYQKNPQND 297
++ Q +AY G N+L +YPQ RP+ F QI+ +L YY+ F YY+K
Sbjct: 243 LRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKVYYKKEKDKK 302
Query: 298 WQKLYPPAFY 307
Q L+ P +Y
Sbjct: 303 VQTLFSPKYY 312
>gi|94990716|ref|YP_598816.1| Putative competence protein/transcription factor [Streptococcus
pyogenes MGAS10270]
gi|94544224|gb|ABF34272.1| Putative competence protein/transcription factor [Streptococcus
pyogenes MGAS10270]
Length = 320
Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats.
Identities = 129/310 (41%), Positives = 188/310 (60%), Gaps = 4/310 (1%)
Query: 1 MFVARDARGELVNVLEDKLE-KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFEN 59
+ A D + +L +++ + K + CPAC + LRQG R HFAH L C F EN
Sbjct: 4 ILTALDGKNQLTSLVTQPISTKPPFRCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAEN 63
Query: 60 ESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
ES EHL K LY L + V +E L EL+QIAD++VN LALE+QCSPLP + LK+R
Sbjct: 64 ESEEHLTLKAKLYTSLVRTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKR 123
Query: 120 SEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIY 179
++ Y+ +GY V WLLG+KLWL LT LQ+ FLYFS ++GF++WELD +LRLKYLI+
Sbjct: 124 TKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSSSLGFHLWELDAAANLLRLKYLIH 183
Query: 180 QDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFW 239
+DL GK+ Y K S +++E+ RLPY+++ + + ++ + I++ L ++ W
Sbjct: 184 EDLFGKVSYLTKTISLDH-NIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHPKW 242
Query: 240 MKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--FFQIEQDLTSYYQHFYTYYQKNPQND 297
++ Q +AY G N+L +YPQ RP+ F QI+ +L YY+ F YY+K
Sbjct: 243 LRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKVYYKKEKDKK 302
Query: 298 WQKLYPPAFY 307
Q L+ P +Y
Sbjct: 303 VQTLFSPKYY 312
>gi|28895712|ref|NP_802062.1| putative transcription factor [Streptococcus pyogenes SSI-1]
gi|28810961|dbj|BAC63895.1| putative transcription factor [Streptococcus pyogenes SSI-1]
Length = 282
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 120/275 (43%), Positives = 172/275 (62%), Gaps = 3/275 (1%)
Query: 35 LRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETKVQLEYPLSELKQIA 94
+RQG R+HFAH L C F ENES EHL K LY L + V +E L EL+QIA
Sbjct: 1 MRQGTIRRSHFAHVQLAHCQFQAENESEEHLTLKAKLYTSLVRTEAVCIEKYLPELQQIA 60
Query: 95 DVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYF 154
D+++N LALE+QCSPLP + LK+R++ Y+ +GY V WLLG+KLWL LT LQ+ FLYF
Sbjct: 61 DLWMNDKLALEIQCSPLPVERLKKRTKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYF 120
Query: 155 SQNMGFYVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKIS 214
S ++GF++WELD +LRLKYLI++DL GK+ Y K S +++E+ RLPY+++ +
Sbjct: 121 SSSLGFHLWELDAAANLLRLKYLIHEDLFGKVSYLTKTISLDH-NIMEMFRLPYQQEILY 179
Query: 215 HFTVSEDKDICRYIRQQLYYQNLFWMKEQAEAYQKGENILTYGLKEWYPQIRPIVGK--F 272
+ ++ + I++ L ++ W++ Q +AY G N+L +YPQ RP+ F
Sbjct: 180 SYQKKMTVNLSKRIQRALLARHPKWLRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGF 239
Query: 273 FQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFY 307
QIE +L YY+ F YY+K Q L+ P +Y
Sbjct: 240 CQIEGNLRPYYESFKVYYKKEKDKKVQTLFSPKYY 274
>gi|1771207|emb|CAA68132.1| pepF2 [Lactococcus lactis]
Length = 215
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 89/207 (42%), Positives = 130/207 (62%), Gaps = 18/207 (8%)
Query: 114 KVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLR 173
K LKER E Y+ G+ VLWL+G+ LWLK+++T L + +YFS+N GFY WELD + Q LR
Sbjct: 2 KRLKERKENYQVHGFTVLWLMGENLWLKDQITNLVKNLVYFSENRGFYYWELDFKTQKLR 61
Query: 174 LKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLY 233
LK LI++DLRGK+ Y +E +GQG L+E LRLP+ QK+ + D + +IR+QLY
Sbjct: 62 LKSLIHEDLRGKIIYLQEEIPFGQGRLIEQLRLPFLSQKLLTIPLIVDLKLAEFIRRQLY 121
Query: 234 YQNLFWMKEQAEAYQKGENILTYGLKEWYPQIRPI-------------VGKFFQIEQDLT 280
Y + W+K Q + YQ+GEN+L + + I P+ + KF QI+Q++
Sbjct: 122 YCSPKWLKLQEKYYQRGENLLNLTFERSF--IAPLGLNLLEVFDDEIPLHKFTQIKQNIN 179
Query: 281 SYYQHFYTYYQKNPQNDWQKLYPPAFY 307
YY++F +Q QN ++ +YPP FY
Sbjct: 180 LYYENFLINFQ---QNSFKAVYPPRFY 203
>gi|29377157|ref|NP_816311.1| competence protein, putative [Enterococcus faecalis V583]
gi|29344623|gb|AAO82381.1| competence protein, putative [Enterococcus faecalis V583]
Length = 392
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 88/252 (34%), Positives = 145/252 (57%), Gaps = 5/252 (1%)
Query: 21 KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYH-WLKKET 79
+QA+ CP C + L+ GP HFAH+ C + E E+ EHL K+ L+++
Sbjct: 29 EQAFVCPMCHQSVILKAGPIKIPHFAHRKKNSCWYEAEAETEEHLRLKQLFAEKCLREKL 88
Query: 80 KVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLW 139
Q+E L LKQ D+ + G +A+E+QCSPLP K L ER+E Y++ GYQV+W+LG++L
Sbjct: 89 SFQVEAYLPTLKQRPDLLI-GKIAIEIQCSPLPIKRLVERTETYQTHGYQVVWILGERLV 147
Query: 140 LKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGS 199
K++LT+L + FLYFS+++GFY+W +K+++ + L I + + + + + + + +
Sbjct: 148 PKDKLTQLTKQFLYFSESLGFYLWSANKKQERIELLCHIEESQCQQFYRRKQSWDFYEKQ 207
Query: 200 LLEILRLPYKRQKI---SHFTVSEDKDICRYIRQQLYYQNLFWMKEQAEAYQKGENILTY 256
LLEI RLP + T D + + QQL Y+N ++ Q+ Y KG ++L
Sbjct: 208 LLEIFRLPTANLNLLPDRRHTGQLMHDYYQKLTQQLGYRNAQLLRTQSFLYTKGCHLLQL 267
Query: 257 GLKEWYPQIRPI 268
+YP ++ I
Sbjct: 268 PPWFYYPGLKLI 279
>gi|28378824|ref|NP_785716.1| competence protein [Lactobacillus plantarum WCFS1]
gi|28271661|emb|CAD64567.1| competence protein [Lactobacillus plantarum WCFS1]
Length = 361
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 88/262 (33%), Positives = 122/262 (46%), Gaps = 15/262 (5%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M +A DA+ +LVN + + Y CP C + L++G + HFAH DCD F E E
Sbjct: 1 MLIAMDAQHQLVNAATADRQIE-YYCPGCVQPVRLKRGAVIVPHFAHVHATDCDAFSEGE 59
Query: 61 SPEHLANKESLYHWLKKET-KVQLEYPLSELKQIADVFVNGN----LALEVQCSPLPQKV 115
+ EHL K+ L W V+LE L E+ Q D+ V LALE QCSPL +
Sbjct: 60 TTEHLRGKQQLATWFAASGYTVRLEAGLPEIHQRPDILVRRGTAQPLALEFQCSPLSVER 119
Query: 116 LKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLK 175
L R++GYR GYQVLWLLG+ + L FL + Q G ++ LD + +RL
Sbjct: 120 LAARTQGYRQHGYQVLWLLGRPYQRQLHLNSKALKFLQYQQRWGLFLLFLDTQSTSVRLL 179
Query: 176 YLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQ 235
+ + L YQ S+L +L KI+ T+ + R+ QQL
Sbjct: 180 HHVLTLDTEPLTYQTIRLDTRSQSVLHFRQLA---PKINTPTLPDTH--LRHYYQQLMLA 234
Query: 236 NLFWMKE----QAEAYQKGENI 253
L + Q YQ+G I
Sbjct: 235 RLRHQRGFDALQVACYQRGGTI 256
>gi|90961374|ref|YP_535290.1| Putative competence protein/transcription factor [Lactobacillus
salivarius subsp. salivarius UCC118]
gi|90820568|gb|ABD99207.1| Putative competence protein/transcription factor [Lactobacillus
salivarius subsp. salivarius UCC118]
Length = 299
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 69/177 (38%), Positives = 105/177 (59%), Gaps = 5/177 (2%)
Query: 7 ARGELVNVLEDKLEKQA--YTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEH 64
A+ E N++E + K+ Y C C GQ+ LR G +HFAHK CD F E E+ EH
Sbjct: 4 AKDEKNNIVEANMAKKGRKYYCSGCHGQVILRCGKLRVSHFAHKK-HACDIFSEGETLEH 62
Query: 65 LANKESLYHWLKKETK-VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGY 123
L K+ L WL+KE K Q+E L+ L Q D+ N N A E QCSP+ + + +RS+GY
Sbjct: 63 LRGKKLLMTWLRKEGKNPQIEAYLTSLHQRPDILCN-NKAFEFQCSPISVERMSKRSKGY 121
Query: 124 RSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
S+GY W LG++ +++RLT+ F+ + +N+GFY+ ++ E++ + + Y I Q
Sbjct: 122 ISEGYDFFWFLGKRHLIRKRLTQQIAQFIRWHKNLGFYLIYINVEQRNMEVYYHIQQ 178
>gi|69247675|ref|ZP_00604451.1| Competence CoiA-like [Enterococcus faecium DO]
gi|68194747|gb|EAN09227.1| Competence CoiA-like [Enterococcus faecium DO]
Length = 332
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 128/267 (47%), Gaps = 8/267 (2%)
Query: 22 QAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK- 80
+ Y C C ++ L++G HFAH+ +C F E ES EHL KE WL + +
Sbjct: 21 KKYYCRGCRKRVILKKGKKKCAHFAHQKSDNCSVFSERESKEHLQLKECFMDWLGQSVEP 80
Query: 81 VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWL 140
V LE L L+Q D+ + NLA+E+QCS L + ER++ Y + YQV W+LG
Sbjct: 81 VFLEAYLPRLRQRPDILL-ANLAIEIQCSRLSHQRFIERTQNYLNNSYQVWWILGNSFLG 139
Query: 141 KERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSL 200
+ + + +++ Y+++ G + W+ D +KQ L L + I + + G + + +++ L
Sbjct: 140 QSQFSLIEKSCCYYNRKRGVHCWKADLKKQKLYLYHHITETVSGHISFCSSCWTFSSRDL 199
Query: 201 LEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWMKEQAEAYQKGENILTYGLKE 260
EI + +D +++ +QL ++ + Q + Y + +++L L
Sbjct: 200 KEIFTSNEIKMNQMKKIEKVSEDGKKWLTRQLIHKQKNTVSIQEQCYLRHKHLLH--LSS 257
Query: 261 WYPQIRPIVGKFFQIEQDLTSYYQHFY 287
W Q +FF Q+ Y+ Y
Sbjct: 258 WIYQ----KSRFFFYLQEQVFLYRMLY 280
>gi|52144138|ref|YP_082690.1| possible competence protein [Bacillus cereus E33L]
gi|51977607|gb|AAU19157.1| possible competence protein [Bacillus cereus E33L]
Length = 414
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 94/172 (54%), Gaps = 17/172 (9%)
Query: 1 MFVARDARGELVNVLEDKLE--------KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKD 52
+F+A+ GE +++L+ E ++++ C ACG ++ +R G R HFAHK +
Sbjct: 4 IFIAKRENGEKIHLLDHHDEELLHHMRKRESFFCIACGKEVLMRLGKQKRWHFAHKKVDS 63
Query: 53 CDFFFENESPEHLANKESLYHWLKKET-KVQLEYPLSELKQIADVFVN---GNLALEVQC 108
C F+E ES H+ KE LY W K++ V++E+ L E++Q D+F+ +A+E QC
Sbjct: 64 CLAFYEAESTYHMYGKELLYRWFKRQNVHVEIEHYLPEIRQRPDIFIERAGKQIAIEYQC 123
Query: 109 SPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF 160
+ L + L +R+ Y G QV+W++G +L + ++ FS M F
Sbjct: 124 ANLSIEQLCKRTYSYWRAGIQVIWIIG-----GNQLKKHSAYWMKFSSLMAF 170
>gi|49480047|ref|YP_035432.1| possible competence protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49331603|gb|AAT62249.1| possible competence protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 414
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 94/172 (54%), Gaps = 17/172 (9%)
Query: 1 MFVARDARGELVNVLEDKLE--------KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKD 52
+F+A+ GE +++L+ E ++++ C ACG ++ +R G R HFAHK +
Sbjct: 4 IFIAKRENGEKIHLLDHHDEELLHHMRKRESFFCIACGKEVLMRLGKQKRWHFAHKKVDS 63
Query: 53 CDFFFENESPEHLANKESLYHWLKKET-KVQLEYPLSELKQIADVFVN---GNLALEVQC 108
C F+E ES H+ KE LY W K++ V++E+ L E++Q D+F+ +A+E QC
Sbjct: 64 CLAFYEAESTYHMYGKELLYRWFKRQNVHVEIEHYLPEIQQRPDIFIERAGRKIAIEYQC 123
Query: 109 SPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF 160
+ L + L +R+ Y G QV+W++G +L + ++ FS M F
Sbjct: 124 ANLSIEQLCKRTYSYWQAGIQVIWIIG-----GNQLKKHSAYWMKFSSIMAF 170
>gi|30261303|ref|NP_843680.1| hypothetical protein BA1205 [Bacillus anthracis str. Ames]
gi|47777913|ref|YP_017817.2| hypothetical protein GBAA1205 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49184133|ref|YP_027385.1| hypothetical protein BAS1113 [Bacillus anthracis str. Sterne]
gi|65318569|ref|ZP_00391528.1| COG4469: Competence protein [Bacillus anthracis str. A2012]
gi|30255157|gb|AAP25166.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47551618|gb|AAT30292.2| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178060|gb|AAT53436.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
Length = 414
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 94/172 (54%), Gaps = 17/172 (9%)
Query: 1 MFVARDARGELVNVLEDKLE--------KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKD 52
+F+A+ GE +++L+ E ++++ C ACG ++ +R G R HFAHK +
Sbjct: 4 IFIAKRENGEKIHLLDHHDEELLHHMRKRESFFCIACGKEVLMRLGKQKRWHFAHKKVDS 63
Query: 53 CDFFFENESPEHLANKESLYHWLKKET-KVQLEYPLSELKQIADVFVN---GNLALEVQC 108
C F+E ES H+ KE LY W K++ V++E+ L E++Q D+F+ +A+E QC
Sbjct: 64 CLAFYEAESTYHMYGKELLYRWFKRQNVHVEIEHYLPEIQQRPDIFIERAGRKIAIEYQC 123
Query: 109 SPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF 160
+ L + L +R+ Y G QV+W++G +L + ++ FS M F
Sbjct: 124 ANLSIEQLCKRTYSYWQAGIQVIWIIG-----GNQLKKHSAYWMKFSSIMAF 170
>gi|148543804|ref|YP_001271174.1| Competence CoiA family protein [Lactobacillus reuteri F275]
gi|148530838|gb|ABQ82837.1| Competence CoiA family protein [Lactobacillus reuteri F275]
Length = 344
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 7/201 (3%)
Query: 23 AYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKET-KV 81
AY CP CG + LR+G TH+AHK DC F E E+ EHL K+ +Y W +K
Sbjct: 21 AYYCPGCGQGVILRRGKHKITHYAHKKGNDCGFS-EGETLEHLKGKKQIYQWAQKHHWNP 79
Query: 82 QLEYPLSELKQIADVF--VNGN-LALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKL 138
QLE + Q D+ +NG+ +A+E QCSPL + L R+EGYR V W+LG
Sbjct: 80 QLEVYFPTIAQRPDILLEINGHTVAVEFQCSPLSLEKLLARNEGYRQLRIPVWWILGSPY 139
Query: 139 WLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQG 198
R ++ Q F + W++ + + V+ KY ++ +L Y K Q
Sbjct: 140 LRNLRNKKIVQFTQIFRKQFVLLFWDVKRAQLVINQKY--WRCSYSRLKYDKKTILMEQI 197
Query: 199 SLLEILRLPYKRQKISHFTVS 219
+LE + + ++I +++
Sbjct: 198 EMLEKKQYHFPSKEIRELSLT 218
>gi|118476771|ref|YP_893922.1| possible competence protein [Bacillus thuringiensis str. Al Hakam]
gi|118415996|gb|ABK84415.1| possible competence protein [Bacillus thuringiensis str. Al Hakam]
Length = 414
Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 17/172 (9%)
Query: 1 MFVARDARGELVNVLEDKLE--------KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKD 52
+F+A+ GE +++L+ E ++++ C ACG ++ +R G R HFAHK +
Sbjct: 4 IFIAKRENGEKIHLLDHHDEELLHHMRKRESFFCIACGKEVLMRLGKQKRWHFAHKKVDS 63
Query: 53 CDFFFENESPEHLANKESLYHWLKKET-KVQLEYPLSELKQIADVFVN---GNLALEVQC 108
C F+E ES H+ KE LY W K++ V++E+ L E++Q D+F+ +A+E QC
Sbjct: 64 CLAFYEAESTYHMYGKELLYRWFKRQNVHVEIEHYLPEIQQRPDIFIERAGRKIAIEYQC 123
Query: 109 SPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF 160
+ L + L R+ Y G QV+W++G +L + ++ FS M F
Sbjct: 124 ANLSIEQLCTRTYSYWQAGIQVIWIIG-----GNQLKKHSAYWMKFSSIMAF 170
>gi|149182737|ref|ZP_01861202.1| hypothetical protein BSG1_15208 [Bacillus sp. SG-1]
gi|148849551|gb|EDL63736.1| hypothetical protein BSG1_15208 [Bacillus sp. SG-1]
Length = 369
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 24/218 (11%)
Query: 19 LEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLY-HWLKK 77
L++Q + CP C L L+ G HFAHKS C+ E E+ HL K L+ H+
Sbjct: 25 LKEQEFFCPECCSPLILKAGDIKVPHFAHKSRTHCEGRHEPETFHHLRGKAILFQHFSSF 84
Query: 78 ETKVQLEYPLSELKQIADVFVN---GNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLL 134
V LE L+++ Q D+F++ N ALE QC+P+ +R++GY + G + +W+L
Sbjct: 85 IPYVALERYLADIHQRPDIFIHFGGRNFALEYQCTPISSTEFTKRTKGYMNAGIEPIWIL 144
Query: 135 GQKLWLKER----LTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKY-------LIYQDLR 183
G+++ K L+ QQ F+ FS + G+++ D + + Y I+
Sbjct: 145 GKRVKAKGAKTLVLSNFQQCFIRFSPHAGYWIAYFDSHSKNMYFFYNLSPVSSNIFTSET 204
Query: 184 GKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSED 221
LHY F + LP K +HF S+D
Sbjct: 205 LTLHYTSIPFPF---------TLPCKNDTENHFLASKD 233
>gi|30019346|ref|NP_830977.1| putative competence protein/transcription factor [Bacillus cereus
ATCC 14579]
gi|29894889|gb|AAP08178.1| putative competence protein/transcription factor [Bacillus cereus
ATCC 14579]
Length = 414
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 17/172 (9%)
Query: 1 MFVARDARGELVNVL----EDKL----EKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKD 52
+F+A+ GE +++L E+ L +++ + C ACG ++ ++ G HFAHK +
Sbjct: 4 IFIAKRENGEKIHLLYNCNEELLRRMRQQERFFCVACGKEVQMKLGKQKSWHFAHKKVDS 63
Query: 53 CDFFFENESPEHLANKESLYHWLKKET-KVQLEYPLSELKQIADVFVN---GNLALEVQC 108
C F+E ES H+ KE LY W K++ +V +EY L E+KQ DVFV +A+E QC
Sbjct: 64 CLAFYEAESKYHMHGKELLYRWFKRQNFQVDIEYYLPEIKQRPDVFVERAGRKIAIEYQC 123
Query: 109 SPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF 160
+ L + L +R+ Y G QV+W++G +L + ++ FS M F
Sbjct: 124 ANLAIEQLYKRTYSYWQAGIQVIWIVG-----GNQLKKQSAYWMKFSSLMAF 170
>gi|92090000|ref|ZP_01274914.1| Competence CoiA-like [Lactobacillus reuteri 100-23]
gi|91803232|gb|EAS88117.1| Competence CoiA-like [Lactobacillus reuteri 100-23]
Length = 344
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/165 (34%), Positives = 82/165 (49%), Gaps = 5/165 (3%)
Query: 16 EDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWL 75
E+ AY CP CG + LR+G TH+AHK +C F E E+ EHL K+ +Y W
Sbjct: 14 ENAKSDMAYYCPGCGQGVILRRGKHKITHYAHKRRNNCGFS-EGETLEHLKGKKQIYQWA 72
Query: 76 KKET-KVQLEYPLSELKQIADVF--VNGN-LALEVQCSPLPQKVLKERSEGYRSQGYQVL 131
+K QLE + Q D+ +NG +A+E QCSPL + L R+EGYR V
Sbjct: 73 QKHHWNPQLEVYFPTIAQRPDILLEINGQTVAVEFQCSPLSLERLLARNEGYRQLKIPVW 132
Query: 132 WLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKY 176
W+LG R ++ Q F + W++ + + V+ KY
Sbjct: 133 WILGSPYLRNLRNKKIVQFTQIFRKQFVLLFWDVKRAQLVINQKY 177
>gi|47568399|ref|ZP_00239100.1| putative competence protein/transcription factor [Bacillus cereus
G9241]
gi|47554947|gb|EAL13297.1| putative competence protein/transcription factor [Bacillus cereus
G9241]
Length = 411
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 85/147 (57%), Gaps = 12/147 (8%)
Query: 1 MFVARDARGELVNVLEDKLE--------KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKD 52
MF+A+ GE +++L+ E ++++ C ACG ++ +R G + HFAHK +
Sbjct: 1 MFIAKRENGEKIHLLDHHDEELLHRMRKRESFFCTACGKEVLMRLGKQKKWHFAHKKVDS 60
Query: 53 CDFFFENESPEHLANKESLYHWLKKET-KVQLEYPLSELKQIADVFVN---GNLALEVQC 108
C F+E ES H+ KE LY WLK++ V++E+ L E++Q D+F+ +A+E QC
Sbjct: 61 CLAFYEAESIYHMHGKELLYRWLKRQNFHVEIEHYLPEIQQRPDIFIERAGRKIAIEYQC 120
Query: 109 SPLPQKVLKERSEGYRSQGYQVLWLLG 135
+ L + L +R+ Y QV+W++G
Sbjct: 121 ANLSIEQLYKRTHSYWRASIQVIWIIG 147
>gi|49483162|ref|YP_040386.1| hypothetical protein SAR0967 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49241291|emb|CAG39972.1| hypothetical protein [Staphylococcus aureus subsp. aureus MRSA252]
Length = 328
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/135 (40%), Positives = 80/135 (59%), Gaps = 3/135 (2%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M VA + E V + L K Y CP CG Q+ L++G V +HFAHK L + F NE
Sbjct: 1 MLVALNEEKERV-LATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAE-QKCFNNE 58
Query: 61 SPEHLANKESLYHWLKKE-TKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
S +H +K L ++++ KV++E L E+KQI D+ +N +E+Q SP+P K + +R
Sbjct: 59 SIKHYKSKLILAQMIQQQGCKVEIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQR 118
Query: 120 SEGYRSQGYQVLWLL 134
+EG + GY+V WLL
Sbjct: 119 TEGLKKMGYKVSWLL 133
>gi|16804228|ref|NP_465713.1| hypothetical protein lmo2189 [Listeria monocytogenes EGD-e]
gi|16411659|emb|CAD00267.1| lmo2189 [Listeria monocytogenes]
Length = 371
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 10/185 (5%)
Query: 1 MFVARDARGELVNVLEDKLEK----QAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFF 56
+F AR+ GE + + +E+ + C +C + ++ G HFAH+ C F
Sbjct: 4 IFTARNNIGETFTITKMNVERIKQEERLFCKSCASPVMIKAGQIKIPHFAHEKTMKCAFA 63
Query: 57 FENESPEHLANKESLYHWL-KKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKV 115
E ES EHLA K+ + W + V++E E+ + AD+FVNG +E Q S +
Sbjct: 64 SEGESEEHLAAKKQIMAWFCYQRIPVEIESYFPEINRQADIFVNGKTVIEFQRSSISISE 123
Query: 116 LKERSEGYRSQGYQVLWLLGQKLWLKER----LTRLQQGFLYFSQNMGFYVWELDKEKQV 171
+ +R+ Y S G +V W+LGQ + KE+ L+ QQ F+ + +G++ W ++++
Sbjct: 124 MIQRTMDYLSIGLEVHWILGQVV-KKEKGRICLSAFQQAFIQSDKKLGYHFWHYSAKREI 182
Query: 172 LRLKY 176
L Y
Sbjct: 183 CTLYY 187
>gi|153197063|ref|ZP_01941362.1| competence protein [Listeria monocytogenes 10403S]
gi|127633518|gb|EBA22930.1| competence protein [Listeria monocytogenes 10403S]
Length = 371
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 10/185 (5%)
Query: 1 MFVARDARGELVNVLEDKLEK----QAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFF 56
+F AR+ GE + + +E+ + C +C + ++ G HFAH+ C F
Sbjct: 4 IFTARNNIGETFTITKMNVERIKQEERLFCKSCASPVMIKAGQIKIPHFAHEKTMKCAFA 63
Query: 57 FENESPEHLANKESLYHWL-KKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKV 115
E ES EHLA K+ + W + V++E E+ + AD+FVNG +E Q S +
Sbjct: 64 SEGESEEHLAAKKQIMAWFCYQRIPVEIESYFPEINRQADIFVNGKTVIEFQRSSISISE 123
Query: 116 LKERSEGYRSQGYQVLWLLGQKLWLKER----LTRLQQGFLYFSQNMGFYVWELDKEKQV 171
+ +R+ Y S G +V W+LGQ + KE+ L+ QQ F+ + +G++ W ++++
Sbjct: 124 MIQRTMDYLSIGLEVHWILGQVV-KKEKGRICLSAFQQAFIQSDKKLGYHFWHYSAKREI 182
Query: 172 LRLKY 176
L Y
Sbjct: 183 CTLYY 187
>gi|152974720|ref|YP_001374237.1| Competence CoiA family protein [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023472|gb|ABS21242.1| Competence CoiA family protein [Bacillus cereus subsp. cytotoxis
NVH 391-98]
Length = 411
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 85/147 (57%), Gaps = 12/147 (8%)
Query: 1 MFVARDARGELVNVL--EDK------LEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKD 52
+FVA+ GE +++L +DK EK+ + CPACG ++ L+ G HFAHK+++
Sbjct: 15 LFVAKRENGETIHLLYHQDKKKLLILREKERFFCPACGKEVQLKLGNQKVWHFAHKNIEQ 74
Query: 53 CDFFFENESPEHLANKESLYHW-LKKETKVQLEYPLSELKQIADVFVNGN---LALEVQC 108
C E ES H+ KE LY W + ++ ++E L E++Q D+ + N LA+E QC
Sbjct: 75 CIGSAEPESNYHMRGKEQLYRWIISQKFCAEIEKYLPEIRQRPDILIERNGRRLAIEYQC 134
Query: 109 SPLPQKVLKERSEGYRSQGYQVLWLLG 135
+ + L++R+ Y+ G Q++W+LG
Sbjct: 135 TSISANQLQKRTYAYQKAGIQIIWILG 161
>gi|56964291|ref|YP_176022.1| competence protein/transcription factor [Bacillus clausii KSM-K16]
gi|56910534|dbj|BAD65061.1| competence protein/transcription factor [Bacillus clausii KSM-K16]
Length = 405
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 8/163 (4%)
Query: 24 YTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK-VQ 82
+ CP C Q+ +R G R HFAH+ + C E ES EH+ K+ L+HW K+ K Q
Sbjct: 35 FRCPICNQQVRMRLGTKRRWHFAHQKSEQCPSGGEGESDEHVRGKQLLFHWAAKQNKATQ 94
Query: 83 LEYPLSELKQIADVFVNGN--LALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWL 140
LE L E KQ DV++ + LALE QC+ L K L ER+ Y QG +W+ G
Sbjct: 95 LETYLRESKQRPDVYIEASSPLALEFQCATLSAKTLYERNTLYARQGISPVWIFGGNRLK 154
Query: 141 KERLTRLQ-QGF----LYFSQNMGFYVWELDKEKQVLRLKYLI 178
++R Q F L +++ F+++ +QV L++++
Sbjct: 155 RKRRQMFQIHQFEWYGLQYAKREPFFIYLDAHTEQVCLLRHVV 197
>gi|15923989|ref|NP_371523.1| similar to transcription factor [Staphylococcus aureus subsp.
aureus Mu50]
gi|15926588|ref|NP_374121.1| hypothetical protein SA0858 [Staphylococcus aureus subsp. aureus
N315]
gi|148267432|ref|YP_001246375.1| Competence CoiA family protein [Staphylococcus aureus subsp. aureus
JH9]
gi|150393485|ref|YP_001316160.1| Competence CoiA family protein [Staphylococcus aureus subsp. aureus
JH1]
gi|156979325|ref|YP_001441584.1| hypothetical protein SAHV_0994 [Staphylococcus aureus subsp. aureus
Mu3]
gi|13700803|dbj|BAB42099.1| SA0858 [Staphylococcus aureus subsp. aureus N315]
gi|14246769|dbj|BAB57161.1| similar to transcription factor [Staphylococcus aureus subsp.
aureus Mu50]
gi|147740501|gb|ABQ48799.1| Competence CoiA family protein [Staphylococcus aureus subsp. aureus
JH9]
gi|149945937|gb|ABR51873.1| Competence CoiA family protein [Staphylococcus aureus subsp. aureus
JH1]
gi|156721460|dbj|BAF77877.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 328
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 53/135 (39%), Positives = 80/135 (59%), Gaps = 3/135 (2%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M VA + E V + L K Y CP CG Q+ L++G V +HFAHK L + F NE
Sbjct: 1 MLVALNEEKERV-LATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAE-QKCFNNE 58
Query: 61 SPEHLANKESLYHWLKKE-TKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
+ +H +K L ++++ KV++E L E+KQI D+ +N +E+Q SP+P K + +R
Sbjct: 59 TIKHYKSKLILAQMIQQQGCKVEIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQR 118
Query: 120 SEGYRSQGYQVLWLL 134
+EG + GY+V WLL
Sbjct: 119 TEGLKKMGYKVSWLL 133
>gi|57650192|ref|YP_185872.1| competence protein, putative [Staphylococcus aureus subsp. aureus
COL]
gi|88194693|ref|YP_499489.1| hypothetical protein SAOUHSC_00936 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221081|ref|YP_001331903.1| hypothetical protein NWMN_0869 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|57284378|gb|AAW36472.1| competence protein, putative [Staphylococcus aureus subsp. aureus
COL]
gi|87202251|gb|ABD30061.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150373881|dbj|BAF67141.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
Length = 328
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 53/135 (39%), Positives = 80/135 (59%), Gaps = 3/135 (2%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M VA + E V + L K Y CP CG Q+ L++G V +HFAHK L + F NE
Sbjct: 1 MLVALNEEKERV-LATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAE-QKCFNNE 58
Query: 61 SPEHLANKESLYHWLKKE-TKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
+ +H +K L ++++ KV++E L E+KQI D+ +N +E+Q SP+P K + +R
Sbjct: 59 TIKHYKSKLILAQMIQQQGCKVEIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQR 118
Query: 120 SEGYRSQGYQVLWLL 134
+EG + GY+V WLL
Sbjct: 119 TEGLKKMGYKVSWLL 133
>gi|46908423|ref|YP_014812.1| CoiA-like family protein [Listeria monocytogenes str. 4b F2365]
gi|47091858|ref|ZP_00229653.1| competence protein [Listeria monocytogenes str. 4b H7858]
gi|153168082|ref|ZP_01928113.1| competence protein [Listeria monocytogenes FSL N1-017]
gi|46881694|gb|AAT04989.1| CoiA-like family protein [Listeria monocytogenes str. 4b F2365]
gi|47019869|gb|EAL10607.1| competence protein [Listeria monocytogenes str. 4b H7858]
gi|133726508|gb|EBA28206.1| competence protein [Listeria monocytogenes FSL N1-017]
Length = 361
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 12 VNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESL 71
+NV K E++ + C +C + ++ G HFAH+ C F E ES EHLA K+ +
Sbjct: 10 MNVERIKQEERLF-CKSCASPVMIKAGQIKIPHFAHEKTMKCAFASEGESEEHLAAKKQI 68
Query: 72 YHWL-KKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQV 130
W + V++E E+K+ AD+FVNG +E Q S + + +R+ Y S G +V
Sbjct: 69 MAWYCYQSIPVEVESYFPEIKRQADIFVNGKAVIEFQRSSISISEMIQRTMDYLSIGLEV 128
Query: 131 LWLLGQKLWLKER----LTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKY 176
W+LGQ + KE+ L+ QQ F+ + +G++ W E+++ L Y
Sbjct: 129 HWILGQVV-RKEKGRICLSAFQQAFIQSDKKLGYHFWHYSTEREICTLYY 177
>gi|153203289|ref|ZP_01944612.1| competence protein [Listeria monocytogenes HPB2262]
gi|133734784|gb|EBA36482.1| competence protein [Listeria monocytogenes HPB2262]
Length = 361
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 12 VNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESL 71
+NV K E++ + C +C + ++ G HFAH+ C F E ES EHLA K+ +
Sbjct: 10 MNVERIKQEERLF-CKSCASPVMIKAGQIKIPHFAHEKTMKCAFASEGESEEHLAAKKQI 68
Query: 72 YHWL-KKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQV 130
W + V++E E+K+ AD+FVNG +E Q S + + +R+ Y S G +V
Sbjct: 69 MAWYCYQSIPVEVESYFPEIKRQADIFVNGKAVIEFQRSSISISEMIQRTMDYLSIGLEV 128
Query: 131 LWLLGQKLWLKER----LTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKY 176
W+LGQ + KE+ L+ QQ F+ + +G++ W E+++ L Y
Sbjct: 129 HWILGQVV-KKEKGRICLSAFQQAFIQSDKKLGYHFWHYSTEREICTLYY 177
>gi|21282610|ref|NP_645698.1| hypothetical protein MW0881 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485775|ref|YP_042996.1| hypothetical protein SAS0869 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|21204048|dbj|BAB94746.1| MW0881 [Staphylococcus aureus subsp. aureus MW2]
gi|49244218|emb|CAG42644.1| hypothetical protein [Staphylococcus aureus subsp. aureus MSSA476]
Length = 328
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 53/135 (39%), Positives = 80/135 (59%), Gaps = 3/135 (2%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M VA + E V + L K Y CP CG Q+ L++G V +HFAHK L + F NE
Sbjct: 1 MLVALNEEKERV-LATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAE-QKCFNNE 58
Query: 61 SPEHLANKESLYHWLKKET-KVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
+ +H +K L ++++ KV++E L E+KQI D+ +N +E+Q SP+P K + +R
Sbjct: 59 TIKHYKSKLILAQMIQQQGFKVEIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQR 118
Query: 120 SEGYRSQGYQVLWLL 134
+EG + GY+V WLL
Sbjct: 119 TEGLKKMGYKVSWLL 133
>gi|42518745|ref|NP_964675.1| hypothetical protein LJ0820 [Lactobacillus johnsonii NCC 533]
gi|41583031|gb|AAS08641.1| hypothetical protein LJ_0820 [Lactobacillus johnsonii NCC 533]
Length = 293
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 18/247 (7%)
Query: 9 GELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFE----NESPEH 64
E VN KL + YTCP+C ++ L F H F++ E EH
Sbjct: 17 AEQVNKGFKKLNQDYYTCPSCRKRMILILSEEKLPFFKH--------FYQVRGTGEKEEH 68
Query: 65 LANKESLYHWLKKE-TKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGY 123
+K+ L LK ++E PL + + ADV V LA EVQC+PL + K R Y
Sbjct: 69 YQSKQLLCTALKANGVNAEVEVPLLDQQLRADVLVENKLAFEVQCAPLSETEFKHRHSLY 128
Query: 124 RSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ-DL 182
+ +W++GQ+ +LK +L R ++ FL +S +Y E++ V+ LKY I + +
Sbjct: 129 EKLSIKDIWIVGQRHYLKNKLNRSKEIFLRYSPKWQWYYLEINPFSCVITLKYNILKAAV 188
Query: 183 RGKLHYQIKEFSYGQGSLLEILRL-PYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWMK 241
++ Y IK FS + + + P R+ I + ++ + K Y+++Q+ +++ ++
Sbjct: 189 SSEISYDIKHFSLDEKGIANLFTFAPTNRRNIKYSSIQDQK---IYLQKQITHKSKLGLE 245
Query: 242 EQAEAYQ 248
+ YQ
Sbjct: 246 IASLLYQ 252
>gi|82750612|ref|YP_416353.1| probable competence-related protein [Staphylococcus aureus RF122]
gi|82656143|emb|CAI80554.1| probable competence-related protein [Staphylococcus aureus RF122]
Length = 328
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M VA + E V + L K CP CG Q+ L++G V +HFAHK L + F NE
Sbjct: 1 MLVALNEEKERV-LATTALRKTQCFCPVCGKQVILKRGLKVISHFAHKHLAE-QKCFNNE 58
Query: 61 SPEHLANKESLYHWLKKE-TKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
S +H +K L ++++ KV++E L E+KQI D+ +N +E+Q SP+P K + +R
Sbjct: 59 SIKHYKSKLILAQMIQQQGCKVEIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQR 118
Query: 120 SEGYRSQGYQVLWLL 134
+EG + GY+V WLL
Sbjct: 119 TEGLKKMGYKVSWLL 133
>gi|15615420|ref|NP_243723.1| hypothetical protein BH2857 [Bacillus halodurans C-125]
gi|10175478|dbj|BAB06576.1| BH2857 [Bacillus halodurans C-125]
Length = 405
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 12/147 (8%)
Query: 1 MFVARDARGELVN--------VLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKD 52
M A+ G+ VN VL+ +KQ + CPAC +L L+ G + HFAH+S +
Sbjct: 1 MLTAKLQNGQTVNLLDSWQKEVLQSLQKKQGFYCPACKEKLVLKIGSQRQWHFAHQSKEA 60
Query: 53 CDFFFENESPEHLANKESLYHWLKKET-KVQLEYPLSELKQIADVFVNGN---LALEVQC 108
C E ES HL+ K LY WLK++ +V LE L L+Q D+ + + +A+E QC
Sbjct: 61 CRVSTEPESHYHLSGKRLLYQWLKRQKLEVALEVYLPILQQRPDILLRKDKQLVAVEYQC 120
Query: 109 SPLPQKVLKERSEGYRSQGYQVLWLLG 135
S LP + +K+R++GY+ G +W+LG
Sbjct: 121 SSLPLQEIKKRTDGYKRAGIYPIWVLG 147
>gi|116873622|ref|YP_850403.1| CoiA-like family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742500|emb|CAK21624.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 371
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 12/186 (6%)
Query: 1 MFVARDARGEL-----VNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDF 55
+F AR+ GE +NV K E++ Y C +C + ++ G HFAH+ C F
Sbjct: 4 IFTARNDSGETFTITKMNVERIKQEEKLY-CKSCASPVMIKAGVIKVPHFAHEKATKCAF 62
Query: 56 FFENESPEHLANKESLYHWL-KKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQK 114
E ES EHL K + W + V++E+ E+ + AD+F+N +E Q S +P
Sbjct: 63 ASEGESEEHLLAKRQIMEWFCYQGIPVEVEHYFPEINRQADIFMNNKRVIEFQRSSVPIN 122
Query: 115 VLKERSEGYRSQGYQVLWLLGQKLWLKER----LTRLQQGFLYFSQNMGFYVWELDKEKQ 170
+ +R+ Y S G +V W+LGQK+ KE+ L+ QQ F+ +G++ W E +
Sbjct: 123 EMIQRTMDYLSIGLEVHWILGQKI-KKEKGRICLSAFQQAFIDSDYKLGYHFWHYSVESK 181
Query: 171 VLRLKY 176
+ L Y
Sbjct: 182 LCTLYY 187
>gi|89098112|ref|ZP_01170998.1| hypothetical protein B14911_21328 [Bacillus sp. NRRL B-14911]
gi|89087275|gb|EAR66390.1| hypothetical protein B14911_21328 [Bacillus sp. NRRL B-14911]
Length = 414
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Query: 18 KLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWL-K 76
K+++ ++ CP C ++ L+ G HFAH C+ FENES H+ K +Y WL
Sbjct: 27 KVKEGSFLCPVCREKVMLKVGTRKIPHFAHYKEHSCEASFENESEYHMKGKLDIYRWLIA 86
Query: 77 KETKVQLEYPLSELKQIAD---VFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWL 133
+LE + +KQ D V+ A+E QCSP+P+ + R+ Y+ G+ +W+
Sbjct: 87 NNVHARLETYIKSIKQRPDICFVYAGKKFAVEFQCSPIPESLFASRTSAYKEAGFTPIWI 146
Query: 134 LGQK 137
LG K
Sbjct: 147 LGGK 150
>gi|89204582|ref|ZP_01183159.1| Competence CoiA-like [Bacillus weihenstephanensis KBAB4]
gi|89157643|gb|EAR77635.1| Competence CoiA-like [Bacillus weihenstephanensis KBAB4]
Length = 411
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 17/172 (9%)
Query: 1 MFVARDARGELVNVLEDKLE--------KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKD 52
MF+AR GE +++L ++ E ++ + C ACG ++ ++ G HFAHK +
Sbjct: 1 MFIARRENGEKIHLLYNRDEERLREMRKREKFFCTACGKEVQMKLGTQKSWHFAHKKVDS 60
Query: 53 CDFFFENESPEHLANKESLYHWLK-KETKVQLEYPLSELKQIADVFV---NGNLALEVQC 108
C ++E ES H+ KE LY WLK ++ V +E+ L +KQ D++V + +A+E QC
Sbjct: 61 CLTYYEAESMYHMQGKELLYRWLKHQDFHVDIEHYLPVIKQRPDIYVERADRKIAIEYQC 120
Query: 109 SPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF 160
+ L + L +R+ Y QV+W++G +L + ++ FS M F
Sbjct: 121 ANLSVEQLYKRTYSYWQASIQVIWIIG-----GNQLKKQSAYWMTFSSLMAF 167
>gi|16801357|ref|NP_471625.1| hypothetical protein lin2293 [Listeria innocua Clip11262]
gi|16414805|emb|CAC97521.1| lin2293 [Listeria innocua]
Length = 371
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 1 MFVARDARGELVNVLEDKLEK----QAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFF 56
+F A++ G+ + + +E+ + C +C + ++ G HFAH+ C F
Sbjct: 4 IFTAKNNNGDTFTITKMNVERIKQEERLFCKSCDSPVMIKAGEIKIPHFAHEKATKCAFA 63
Query: 57 FENESPEHLANKESLYHWLK-KETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKV 115
E ES EHL K + W + V+LE+ + + AD++V+ +E Q S +P
Sbjct: 64 SEGESEEHLLAKRQIMAWFGFQGIPVELEHYFPAISRQADIYVSDATVIEFQRSSVPISE 123
Query: 116 LKERSEGYRSQGYQVLWLLGQKLWLKER----LTRLQQGFLYFSQNMGFYVWELDKEKQV 171
+ +R+ Y S G +V W+LGQ + KE+ LT QQ F+ F Q +G++ W ++
Sbjct: 124 MIQRTMDYLSIGLEVHWILGQTI-KKEKGRISLTIFQQAFIQFEQKLGYHFWHYSASDKI 182
Query: 172 LRLKY 176
L Y
Sbjct: 183 TTLYY 187
>gi|42780387|ref|NP_977634.1| hypothetical protein BCE_1313 [Bacillus cereus ATCC 10987]
gi|42736306|gb|AAS40242.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 411
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 1 MFVARDARGELVNVLEDKLE--------KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKD 52
MF+A+ GE +++L E ++++ C ACG ++ +R G + HFAHK
Sbjct: 1 MFIAKRENGEKIHLLYHHDEEILHRMRKRESFVCIACGKKVLMRLGKQKKWHFAHKKEDS 60
Query: 53 CDFFFENESPEHLANKESLYHWLKKET-KVQLEYPLSELKQIADVFVN---GNLALEVQC 108
C F+E ES H KE LY W K++ V +E+ L E++Q D+F+ +A+E QC
Sbjct: 61 CLAFYEAESMYHRHGKELLYRWFKRQNFHVDIEHYLPEIQQRPDIFIERAGRKVAIEYQC 120
Query: 109 SPLPQKVLKERSEGYRSQGYQVLWLLG 135
+ L + L +R+ Y G QV+W++G
Sbjct: 121 ANLSIEQLYKRTYSYWRAGIQVIWIIG 147
>gi|47095763|ref|ZP_00233369.1| competence protein [Listeria monocytogenes str. 1/2a F6854]
gi|153175454|ref|ZP_01930812.1| competence protein [Listeria monocytogenes FSL N3-165]
gi|153180207|ref|ZP_01933346.1| competence protein [Listeria monocytogenes F6900]
gi|153185106|ref|ZP_01935733.1| competence protein [Listeria monocytogenes J0161]
gi|47015906|gb|EAL06833.1| competence protein [Listeria monocytogenes str. 1/2a F6854]
gi|126942320|gb|EBA20061.1| competence protein [Listeria monocytogenes J0161]
gi|133729373|gb|EBA31071.1| competence protein [Listeria monocytogenes FSL N3-165]
gi|133732382|gb|EBA34080.1| competence protein [Listeria monocytogenes F6900]
Length = 352
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 7/170 (4%)
Query: 12 VNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESL 71
+NV K E++ + C +C + ++ G HFAH+ C F E ES EHLA K+ +
Sbjct: 1 MNVERIKQEERLF-CKSCASPVMIKAGQIKIPHFAHEKTMKCAFASEGESEEHLAAKKQI 59
Query: 72 YHWL-KKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQV 130
W + V++E E+ + AD+F NG +E Q S + + +R+ Y S G +V
Sbjct: 60 MAWFCYQRIPVEIESYFPEINRQADIFANGKTVIEFQRSSISISEMIQRTMDYLSIGLEV 119
Query: 131 LWLLGQKLWLKER----LTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKY 176
W+LGQ + KE+ L+ QQ F+ + +G++ W ++++ L Y
Sbjct: 120 HWILGQVV-KKEKGRICLSAFQQAFIQSDKKLGYHFWHYSAKREICTLYY 168
>gi|124521626|ref|ZP_01696509.1| Competence CoiA-like [Bacillus coagulans 36D1]
gi|124496645|gb|EAY44231.1| Competence CoiA-like [Bacillus coagulans 36D1]
Length = 406
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 76/147 (51%), Gaps = 12/147 (8%)
Query: 1 MFVARDARGELVNVLED------KLEKQAYT--CPACGGQLHLRQGPSVRTHFAHKSLKD 52
M A + RGEL+ + E K K ++T C C L L+ G V HF+H
Sbjct: 1 MLSALNERGELIMLTERFTRLDLKQLKTSHTFYCRDCREPLILKIGSRVTPHFSHYRHST 60
Query: 53 CDFFFENESPEHLANKESLYHWLKKE-TKVQLEYPLSELKQIADVFVNGN---LALEVQC 108
C F E ESP HL K+ L+ WL+ + V LE ++Q AD+ V A+E QC
Sbjct: 61 CATFSEPESPMHLQGKKDLFLWLRGQGLDVSLEQYFPSIRQRADLVVRKYRQLFAIEYQC 120
Query: 109 SPLPQKVLKERSEGYRSQGYQVLWLLG 135
SP+P + L ER+EGYR G +W+LG
Sbjct: 121 SPIPFERLMERTEGYRHLGILPVWILG 147
>gi|116629985|ref|YP_815157.1| Competence protein [Lactobacillus gasseri ATCC 33323]
gi|116095567|gb|ABJ60719.1| Competence protein [Lactobacillus gasseri ATCC 33323]
Length = 312
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 63/239 (26%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 18 KLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFE----NESPEHLANKESLYH 73
KL +++Y CP+C ++ L + F H F++ E EHL K+ L
Sbjct: 48 KLNQESYLCPSCKHRMILILSEEKKPFFKH--------FYQVRGTGEKEEHLQAKQLLCT 99
Query: 74 WLKKE-TKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLW 132
LK + +E PL + + AD+ V NL+ EVQC+PL + R Y+ + +W
Sbjct: 100 ALKANGIRADVEVPLLDQQLRADILVENNLSFEVQCAPLSEAEFAHRHALYKKLQIKDIW 159
Query: 133 LLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKY-LIYQDLRGKLHYQIK 191
++G++ +LK ++ Q+ FL +S +Y E++ V+ LKY ++ L +L Y IK
Sbjct: 160 IVGKRHYLKNKINHSQKIFLRYSAKWQWYYLEINPFSCVITLKYNILMAALSSELSYDIK 219
Query: 192 EFSYGQGSLLEILRL--PYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWMKEQAEAYQ 248
FS + + + +R K+S+ +D+ + Y+++Q+ ++ ++ + YQ
Sbjct: 220 TFSLDEKGVASLFTFIPSTRRNKLSYI---QDQKV--YLQKQITQKSKLGLEIASLLYQ 273
>gi|16078218|ref|NP_389035.1| hypothetical protein BSU11530 [Bacillus subtilis subsp. subtilis
str. 168]
gi|2633507|emb|CAB13010.1| yjbF [Bacillus subtilis subsp. subtilis str. 168]
Length = 373
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 18 KLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKK 77
KL+++ + CP CGG+L ++ G HFAHK K C E ES HL K LY WLK
Sbjct: 12 KLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLKT 71
Query: 78 ETKVQLEYP-LSELKQIADVFVNGN---LALEVQCSPLPQKVLKERSEGYRSQGYQVLWL 133
+ + P + + Q DV LA+E QC+ + V ++R+EG++ +G W+
Sbjct: 72 QRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWI 131
Query: 134 LGQKLWLKERLTRLQQGFLYFS 155
+G RL R F S
Sbjct: 132 MGY-----SRLKRTASSFYQLS 148
>gi|116494406|ref|YP_806140.1| Competence protein [Lactobacillus casei ATCC 334]
gi|116104556|gb|ABJ69698.1| Competence protein [Lactobacillus casei ATCC 334]
Length = 351
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 33/285 (11%)
Query: 1 MFVARDARGELVNVLED----KLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFF 56
MFVA D + V + L Q + CP C + ++ G + HFAH+S +
Sbjct: 1 MFVALDKNNQRVTLTSHAQAANLTHQTFHCPICKQVVRIKNGTVMPAHFAHRSQPMGEG- 59
Query: 57 FENESPEHLANKESLYHWLKKE-TKVQLEYPLSELKQIADVFVNGN--LALEVQCSPLPQ 113
E ES EHL K L WLK+ + LEY + ++Q AD+ V LE Q SPL
Sbjct: 60 -EPESIEHLTGKWWLASWLKQHGEQATLEYYDATIRQRADLLVASKPPRVLEFQASPLSV 118
Query: 114 KVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKE-KQVL 172
L++R+ Y +G+QV W+LG + W E ++Q ++ +W L +++
Sbjct: 119 PDLQKRTMMYHERGWQVTWVLGHRYWHPE--GKIQARKFLSIEDHRLTLWHLQTTVGELV 176
Query: 173 RLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQL 232
R+++ + Y Q Y +++I +S K +
Sbjct: 177 RIQFENEGRWLTRFQYDDPPTQTWQA------ESTYPQRQIRQIAISLQKRVQP------ 224
Query: 233 YYQNLFWMKEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQ 277
WM QA AYQ+G N+ W+ RP V + F I +
Sbjct: 225 ------WMTLQAAAYQQGRNL---NGSPWFVHSRPHVLRHFGIPE 260
>gi|75761254|ref|ZP_00741237.1| Putative competence protein/transcription factor [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74491262|gb|EAO54495.1| Putative competence protein/transcription factor [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 414
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 17/172 (9%)
Query: 1 MFVARDARGELVNVL----EDKL----EKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKD 52
+F+A+ GE +++L E+ L +++ + C ACG ++ ++ G HFAHK +
Sbjct: 4 IFIAKRENGEKIHLLYNCNEELLRRMRQQERFFCVACGKEVQMKLGKQKSWHFAHKKVDS 63
Query: 53 CDFFFENESPEHLANKESLYHWLKKET-KVQLEYPLSELKQIADVFVN---GNLALEVQC 108
C F+E ES H KE LY W +++ V +E+ L +++Q D+F+ +A+E QC
Sbjct: 64 CLAFYEAESMYHRHGKELLYRWFERQNFHVDIEHYLPQIQQRPDIFIERAGRKIAIEYQC 123
Query: 109 SPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF 160
+ L + L +R+ Y G QV+W++G +L + ++ FS M F
Sbjct: 124 ANLSIEQLYKRTYSYWRVGIQVIWIIG-----GNQLKKQSAYWMKFSSLMAF 170
>gi|154685587|ref|YP_001420748.1| YjbF [Bacillus amyloliquefaciens FZB42]
gi|154351438|gb|ABS73517.1| YjbF [Bacillus amyloliquefaciens FZB42]
Length = 386
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 16/166 (9%)
Query: 1 MFVARDARGELVNVLED-------KLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDC 53
MF A A G L+ + +L K+ + CP C +L ++ G HFAHK + C
Sbjct: 1 MFSAVTADGRLIQLAGSYSKEKAAELRKKRWFCPVCESELDIKLGREKLPHFAHKKSRLC 60
Query: 54 DFFFENESPEHLANKESLYHWLKKE-TKVQLEYPLSELKQIADVFVNG---NLALEVQCS 109
E ES HL K L+ WLK + V LE L+ Q D+ LA E QC+
Sbjct: 61 PGESEPESEYHLEGKRQLFLWLKTQGCSVSLEPYLTSAGQRPDLTAESGEERLAFEFQCA 120
Query: 110 PLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFS 155
L LK R+ G ++ GY+ +W++G K RL R+ F S
Sbjct: 121 NLSADSLKSRTAGLKNAGYRPVWIIGAK-----RLKRMAAQFFRLS 161
>gi|126654178|ref|ZP_01725985.1| hypothetical protein BB14905_17125 [Bacillus sp. B14905]
gi|126589349|gb|EAZ83502.1| hypothetical protein BB14905_17125 [Bacillus sp. B14905]
Length = 345
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 48/116 (41%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 24 YTCPACGGQLHLRQGPSVRTHFAHKSLKDC-DFFFENESPEHLANKESLYHWLKK-ETKV 81
+ CP C +HL+ G HFAH + C F E ES HL K L+ WL+K KV
Sbjct: 3 FFCPQCLEPVHLKIGSYNIPHFAHHTQSQCPKLFAEGESKLHLQGKIQLFEWLQKLGHKV 62
Query: 82 QLEYPLSELKQIADVFV---NGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLL 134
+LE L+EL Q D+ V N+ALE QCSPL +ER+ GY Q +WL
Sbjct: 63 KLEPYLTELSQRPDLLVALETNNVALEFQCSPLSHHKWQERTTGYEKNNIQAIWLF 118
>gi|138894373|ref|YP_001124826.1| hypothetical protein GTNG_0701 [Geobacillus thermodenitrificans
NG80-2]
gi|134265886|gb|ABO66081.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
Length = 449
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 22 QAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKE-TK 80
+ + CPAC ++ LR G HFAH+ C F E ES HL K L+ WL ++ +
Sbjct: 53 EPFFCPACRKEVVLRSGRRRLPHFAHRKGTVCPFEHEPESERHLTGKRDLFTWLVRQGIE 112
Query: 81 VQLEYPLSELKQIADVFVNGN---LALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLG 135
+LE L+ + Q DV ALE QCS + + + ER++GYR G LW+LG
Sbjct: 113 AKLEPYLTAIGQRPDVLFRYGPRLYALEYQCSTIDESLFYERNDGYRRLGIHPLWVLG 170
>gi|56419356|ref|YP_146674.1| hypothetical protein GK0821 [Geobacillus kaustophilus HTA426]
gi|56379198|dbj|BAD75106.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 442
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Query: 21 KQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKE-T 79
++ + CPAC ++ LR G HFAH+ C E ES HL K L+ WL ++
Sbjct: 32 QEPFFCPACRQEVVLRSGRYRLPHFAHRKGAACPVEHEPESERHLTGKRDLFAWLIRQGM 91
Query: 80 KVQLEYPLSELKQIADV-FVNGN--LALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLG 135
+ +LE L +KQ DV F +G ALE QCS + + + +ER++GYR G + LW+LG
Sbjct: 92 EAKLEPYLPAIKQRPDVLFRHGPHLYALEYQCSTIDESLFRERNDGYRLLGIRPLWVLG 150
>gi|116334078|ref|YP_795605.1| Competence protein [Lactobacillus brevis ATCC 367]
gi|116099425|gb|ABJ64574.1| Competence protein [Lactobacillus brevis ATCC 367]
Length = 364
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 14/222 (6%)
Query: 24 YTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETKVQL 83
Y CPAC + LR G + +FAH C E E+ +HL K L + V L
Sbjct: 22 YRCPACQQPVVLRHGSQIPPYFAHHPQAPCHLAGEGETRQHLLGKRQLATFFSDWGPVTL 81
Query: 84 EYPLSELKQIADVFVN--GNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLK 141
E L ++Q AD +++ +ALE QCSP+ ++ + +R+ GY+ WLLG + +
Sbjct: 82 ERILPAIQQRADGWLDLPQPVALEFQCSPISREAVAQRTAGYQRIACYPFWLLGSRYAQQ 141
Query: 142 ERLTRLQQGFLYF--SQNMGFYVWELDKEKQVLRLKYLIYQDLRGKLHYQ------IKEF 193
+ RL + F + ++ WE+D+ + LR+ + + Q G + + E
Sbjct: 142 KLNWRLIERFACWLTGWDLCLLFWEVDQNR--LRVAHHLRQTATGAYINETAWVTTLSEL 199
Query: 194 SYGQGSLLEILRLPYKRQKISHF--TVSEDKDICRYIRQQLY 233
G ++R P ++Q S+ + R I++ LY
Sbjct: 200 VAGPTPCTTVVRNPGQKQYRSYLNQVLRRATPTLRPIQEALY 241
>gi|58336968|ref|YP_193553.1| competence protein [Lactobacillus acidophilus NCFM]
gi|58254285|gb|AAV42522.1| competence protein [Lactobacillus acidophilus NCFM]
Length = 287
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 11 LVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKES 70
L+N K+ ++ Y CP C ++ L F H + E EH +K
Sbjct: 19 LINSGHKKINQEIYRCPHCNKKVILVVSQKKSAFFKHLTSYR---HMMGEKEEHHMSKIL 75
Query: 71 LYHWLKKET-KVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQ 129
L L +LE PL++ + ADV + LA E+QC+PL +K K R Y+ G
Sbjct: 76 LKSALTAAGFNAKLEIPLADGQLRADVLASEKLAFEIQCAPLSEKEFKHRHFLYKKIGIM 135
Query: 130 VLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQD-LRGKLHY 188
+W++GQ+ +LK L Q F ++ G Y E++ +K LKY I Q+ L L Y
Sbjct: 136 DIWIVGQRHYLKRFLKDTQLIFFRKNKQWGNYYLEINPKKNRFCLKYNIMQEPLTRALRY 195
Query: 189 QIKEFSYGQGSL 200
QIK F+ + S+
Sbjct: 196 QIKYFALDEISM 207
>gi|52079655|ref|YP_078446.1| conserved protein YjbF [Bacillus licheniformis ATCC 14580]
gi|52785017|ref|YP_090846.1| YjbF [Bacillus licheniformis ATCC 14580]
gi|52002866|gb|AAU22808.1| conserved protein YjbF [Bacillus licheniformis ATCC 14580]
gi|52347519|gb|AAU40153.1| YjbF [Bacillus licheniformis DSM 13]
Length = 382
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 20 EKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKE- 78
++ A+ CP C +L L+ G HFAHK C E ESP HL K LY WL ++
Sbjct: 28 KRHAFYCPVCRCELDLKIGSVKLPHFAHKPDAACPVPHEPESPYHLKGKRLLYEWLGRQG 87
Query: 79 TKVQLEYPLSELKQIADVFVNG---NLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLG 135
+ LE L E++Q D+ + +A+E QC+ L ++R+EG+ G + +W+LG
Sbjct: 88 LRPVLEPYLQEIRQRPDLLLEHGTRQVAVEFQCANLNAAAYRKRTEGFLRLGIEPVWILG 147
Query: 136 QKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVL 172
R+ RL S+ ++ + DK ++L
Sbjct: 148 -----GNRIKRLTGDLFQLSRFHWQFIQKSDKPPKLL 179
>gi|116492966|ref|YP_804701.1| Competence protein [Pediococcus pentosaceus ATCC 25745]
gi|116103116|gb|ABJ68259.1| Competence protein [Pediococcus pentosaceus ATCC 25745]
Length = 341
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 70/227 (30%), Positives = 114/227 (50%), Gaps = 14/227 (6%)
Query: 22 QAYTCPACGGQLHLRQGPSVRTHFAHKSL-KDCDFFFENESPEHLANKESLYHWL-KKET 79
+ Y CP+C L L G + +FAH+S K + + E+ HL K+ + + +++
Sbjct: 21 EKYFCPSCQQALKLCSGQYKKNYFAHQSFTKKQGYQPKGETKRHLMGKKKVVDFFNQRQI 80
Query: 80 KVQLEYPLSELKQIADVFVNGN---LALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQ 136
VQ E+ L E+KQ AD+ V + +E QCSP+ K +++R++ Y G W+ G
Sbjct: 81 SVQTEFYLPEIKQRADLRVEIDDHIYLVEYQCSPIKLKEIQKRTKAYLKLGLISYWIAGP 140
Query: 137 KLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQ-VLRLKYLIYQDLRGKLHYQIKEFSY 195
K K L + Q F FS+ G+++ D KQ + + + + + GK+ YQ + F+
Sbjct: 141 KHLGKGSLFQTVQKFGRFSKKEGWWILAWDALKQEAPHVFFNMQRAVLGKVLYQERIFNC 200
Query: 196 GQGSLLEILR--LP---YKRQKISHFTVSEDKDICRYIR-QQLYYQN 236
+G E +R LP Y+ KI H + D RY+ QQL Y N
Sbjct: 201 -KGHQNEFIRPKLPTVEYEAYKIEHSLLGNQIDQ-RYVEIQQLCYTN 245
>gi|118587357|ref|ZP_01544783.1| competence protein, CoiA-like family [Oenococcus oeni ATCC
BAA-1163]
gi|118432181|gb|EAV38921.1| competence protein, CoiA-like family [Oenococcus oeni ATCC
BAA-1163]
Length = 362
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M VA+D R LV + + + CP C +L L G +FAH + +C+ F ENE
Sbjct: 1 MLVAKDCRNVLVEAGRAR-RGEFFYCPFCKKRLLLCHGEIRIPYFAHSARDNCNSFSENE 59
Query: 61 SPEHLANKESLYHWLKK-ETKVQLEYPLSELKQIADVFVNGN----LALEVQCSPLPQKV 115
S HL K+ + ++ + +LE L + Q AD+ ++ + LA+E Q SP+
Sbjct: 60 SEIHLLAKQKIKEATERLGYRAELEKVLPLISQRADLIISDSAGKELAIEFQQSPISIPR 119
Query: 116 LKERSEGYRSQGYQVLWLLG 135
L+ER++GY+S G V+W LG
Sbjct: 120 LRERNQGYKSIGLSVIWFLG 139
>gi|116491178|ref|YP_810722.1| Competence protein [Oenococcus oeni PSU-1]
gi|116091903|gb|ABJ57057.1| Competence protein [Oenococcus oeni PSU-1]
Length = 362
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M VA+D LV + + + CP C +L L G +FAH + +C+ F ENE
Sbjct: 1 MLVAKDCHNVLVEAGRAR-RGEFFYCPFCKKRLLLCHGEIRIPYFAHSARDNCNSFSENE 59
Query: 61 SPEHLANKESLYHWLKK-ETKVQLEYPLSELKQIADVFVNGN----LALEVQCSPLPQKV 115
S HL K+ + ++ + +LE L + Q AD+ ++ + LA++ Q SP+
Sbjct: 60 SEIHLLAKQKIKEATERLGYRAELEKVLPLISQRADLIISDSAGKELAIKFQQSPISIPR 119
Query: 116 LKERSEGYRSQGYQVLWLLG 135
L+ER++GY+S G V+W LG
Sbjct: 120 LRERNQGYKSIGLSVIWFLG 139
>gi|116513687|ref|YP_812593.1| Competence protein [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
gi|116093002|gb|ABJ58155.1| Competence protein [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
Length = 286
Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 19 LEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKE 78
L ++ Y CP C + L F H + E EH K L L
Sbjct: 27 LNQEVYRCPRCQKPVILVLSQKAEPFFKHYQA----YRGLGEQEEHRQGKMLLKAALTAA 82
Query: 79 -TKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQK 137
+ E PL++ ADV LA EVQC+PL + R Y++ G + +WL+G++
Sbjct: 83 GLNAKAEVPLADGALRADVLATPLLAFEVQCAPLSKGEFAHRHALYQAIGIKDVWLVGRR 142
Query: 138 LWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ 180
+L E+L + Q F ++ G Y E+ +E ++RLKY I Q
Sbjct: 143 HFLGEKLKQTQLIFFRENRCWGSYYLEIHQEAGLIRLKYQIRQ 185
>gi|23098670|ref|NP_692136.1| hypothetical protein OB1215 [Oceanobacillus iheyensis HTE831]
gi|22776897|dbj|BAC13171.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 390
Score = 59.7 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 13 NVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLY 72
N++ K K+A+ CP C ++ +R G V HF+H +C E H K LY
Sbjct: 21 NIILWKQYKEAFYCPTCHSKVIIRSGSKVIPHFSHLPHSNCR-LGNGEGMYHEMGKYELY 79
Query: 73 HWLKKET-KVQLEYPLSELKQIADVFV---NGNLALEVQCSPLPQKVLKERSEGYRSQGY 128
WL + +V LE ++ + AD+ + N + +E QC+ + + + ER+ Y
Sbjct: 80 QWLSNQNIEVDLEVYFPQINRRADLVIKVLNKIIIIEFQCTKISAEEIAERTSAYNQINL 139
Query: 129 QVLWLLG 135
V+W++G
Sbjct: 140 HVIWIVG 146
>gi|89095754|ref|ZP_01168648.1| hypothetical protein B14911_03454 [Bacillus sp. NRRL B-14911]
gi|89089500|gb|EAR68607.1| hypothetical protein B14911_03454 [Bacillus sp. NRRL B-14911]
Length = 214
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 8 RGELVNV-----------LEDKLEKQAYTCPACGGQ--LHLRQGPSVRTHFAHKSLKDCD 54
R EL+N+ L+ K Y CP C G+ ++ + P HF+H+ +C
Sbjct: 7 RDELINLASTHYKDQRSRLKSDTNKDQYICPYCNGKVVINWAEVPKRIPHFSHRQTLECI 66
Query: 55 FFFENESPEHLANKESLYHWLK-----KETKVQLEYPLSELKQIADVFV---NG-NLALE 105
+ E+ H K L+++L+ K +++E+ + E +QIADVF+ NG +E
Sbjct: 67 YEGGGETESHRLGKVKLFNYLESLLNHKVRSIEIEHYIPETRQIADVFIEFENGVQWVVE 126
Query: 106 VQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKL 138
Q S + + ++ER + Y+ G + +W++G+ L
Sbjct: 127 YQRSNISPEKIQERKKLYQKAGIKDIWIIGENL 159
>gi|73663095|ref|YP_301876.1| putative competence protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495610|dbj|BAE18931.1| putative competence protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 332
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M +A D LV ++ YTCP C ++ L++G + HFAH + F + E
Sbjct: 1 MLLAYDHHKHLV-FANHAVKDAEYTCPHCKSKMILKKGEIITPHFAHLKVASI-FCSKGE 58
Query: 61 SPEHLANKESLYHWLK-KETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
+ H + K L L VQ+E ++ + Q D+ ++ +A+E+Q S + +K+R
Sbjct: 59 TQAHYSLKYQLALKLSCIGYHVQIEPYIAGIYQYPDLIIDKKIAIEIQFSKITISSVKKR 118
Query: 120 SEGYRSQGYQVLWLLGQKLWLKER----LTRLQQGFLYFSQNMGFYVWELDKEKQVLRLK 175
S G GY+++W++ + K R LT+ ++ F+ F ++ W+ ++ +
Sbjct: 119 SNGLLHIGYRLIWIIPNPYYDKLRHILILTKYERTFIDF-KSKRLLTWDSSNKQLYM--- 174
Query: 176 YLIYQDLRG------KLHYQIKEFSY 195
Y IY + G K +IK+F Y
Sbjct: 175 YQIYNFIGGNRYIAHKFKLEIKDFEY 200
>gi|46445812|ref|YP_007177.1| hypothetical protein pc0178 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399453|emb|CAF22902.1| hypothetical protein [Candidatus Protochlamydia amoebophila UWE25]
Length = 288
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 20 EKQAYTCPACGGQLHLRQGPSVRTHFAH-KSLKDCDFFFENESPEHLANKESLYHWLKKE 78
+K Y C C G L R G + HF H + + C + H+ N Y L K
Sbjct: 23 KKVNYRCIECNGHLRSRGGALRQRHFYHLEPNRACHLHRKGIIHIHIQNH--FYTCLPK- 79
Query: 79 TKVQLEYPLSELKQIADV-FVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQK 137
QLEY L E+ +IADV +++ + E+Q SP+ + L +R+ Y+ G+ V+W+L K
Sbjct: 80 GDCQLEYRLPEIGRIADVVWLSKKIVFEIQYSPITAEELSKRNHDYQKMGWSVVWVLHDK 139
Query: 138 LWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQ 197
L+ + RL+ +Q + Y +D+E + I+ D +F Y Q
Sbjct: 140 LYNQFRLSAAEQALRFLPH----YFTNMDREGKG------IFYD----------QFDYIQ 179
Query: 198 GS--LLEILRLPYKRQKISHFTVSEDKDICRYIRQQ 231
L ++ LP K S E K+ C Y+ +Q
Sbjct: 180 NGLRLYKMSPLPVDFSKFSLINAQELKEDCLYLIKQ 215
>gi|70726959|ref|YP_253873.1| hypothetical protein SH1958 [Staphylococcus haemolyticus JCSC1435]
gi|68447683|dbj|BAE05267.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 319
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Query: 1 MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE 60
M +A + +GE V K ++ +Y CP C QL L+ G HFAHK C + + E
Sbjct: 1 MLIAINQQGEQVYAHRAK-KQDSYFCPHCSSQLLLKCGTKNIPHFAHKVDSVC-YCAKQE 58
Query: 61 SPEHLANKESLYHWLKK-ETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKER 119
S +H K + L + VQ+E ++Q D+ VN +E+Q S + + + ER
Sbjct: 59 SEQHYFVKCFIAKMLSQLHYHVQIEPYCPTIQQYPDILVNSKYVIEIQFSRIDIEEIIER 118
Query: 120 SEGYRSQGYQVLWLLGQKLWLKER--LTRLQQGFLYFSQNMGFYVW 163
++G++ +V+WL+ + + R L Q F++ N YVW
Sbjct: 119 TKGFKQLNMEVIWLIQDCRYHRGRLYLNSFQAHFIH-PINRCLYVW 163
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.322 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,244,799,758
Number of Sequences: 5470121
Number of extensions: 52704550
Number of successful extensions: 138279
Number of sequences better than 1.0e-05: 89
Number of HSP's better than 0.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 138087
Number of HSP's gapped (non-prelim): 95
length of query: 317
length of database: 1,894,087,724
effective HSP length: 132
effective length of query: 185
effective length of database: 1,172,031,752
effective search space: 216825874120
effective search space used: 216825874120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)