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Cancer Genome Anatomy Project |
| NCI > CGAP > GAI > SNP Maps > Chr 9 > SNPs Localized to Interval 11 |
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D9S279 - D9S290 117.1 cM - 138.4 cM / 357.94 cR - 394.37 cR |
| UniGene | Gene Symbol | Description | SNP IDs | SNP Summary | CGAP Gene Info |
| Confirmed SNPs | |||||
| Hs.522356 | ORM1 | Orosomucoid 1 | CGAP-C-2293 |
SNPs | Gene Info |
| Hs.253903 | STOM | Stomatin | CGAP-C-2249 |
SNPs | Gene Info |
| Hs.495138 | MAPKAP1 | Mitogen-activated protein kinase associated protein 1 | CGAP-C-58840 |
SNPs | Gene Info |
| Validated SNPs | |||||
| Hs.643599 | PAPPA | Pregnancy-associated plasma protein A, pappalysin 1 | CGAP-C-47659 CGAP-C-53531 |
SNPs | Gene Info |
| Hs.143250 | TNC | Tenascin C | CGAP-C-60766 |
SNPs | Gene Info |
| Hs.591910 | TRIM32 | Tripartite motif-containing 32 | CGAP-C-58361 |
SNPs | Gene Info |
| Hs.601562 | ASTN2 | Astrotactin 2 | CGAP-C-49998 |
SNPs | Gene Info |
| Hs.349208 | ZNF618 | Zinc finger protein 618 | CGAP-C-623858 |
SNPs | Gene Info |
| Hs.460124 | PHF19 | PHD finger protein 19 | CGAP-C-59495 |
SNPs | Gene Info |
| Hs.715550 | MEGF9 | Multiple EGF-like-domains 9 | CGAP-C-55986 |
SNPs | Gene Info |
| Hs.269560 | CDK5RAP2 | CDK5 regulatory subunit associated protein 2 | CGAP-C-627407 |
SNPs | Gene Info |
| Hs.193725 | PSMD5 | Proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 | CGAP-C-47791 |
SNPs | Gene Info |
| Hs.594170 | - | CDNA clone IMAGE:5218355 | CGAP-C-266997 |
SNPs | Gene Info |
| Hs.97469 | GGTA1 | Glycoprotein, alpha-galactosyltransferase 1 | CGAP-C-262201 |
SNPs | Gene Info |
| Hs.371563 | RAB14 | RAB14, member RAS oncogene family | CGAP-C-237418 |
SNPs | Gene Info |
| Hs.438937 | - | CDNA clone IMAGE:4811557 | CGAP-C-262964 |
SNPs | Gene Info |
| Hs.709775 | - | MRNA; cDNA DKFZp686I10116 (from clone DKFZp686I10116) | CGAP-C-60186 |
SNPs | Gene Info |
| Hs.495039 | NDUFA8 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa | CGAP-C-52679 |
SNPs | Gene Info |
| Hs.271341 | RABGAP1 | RAB GTPase activating protein 1 | CGAP-C-53045 |
SNPs | Gene Info |
| Hs.415842 | RBM18 | RNA binding motif protein 18 | CGAP-C-602466 |
SNPs | Gene Info |
| Hs.715605 | PPP6C | Protein phosphatase 6, catalytic subunit | CGAP-C-48144 CGAP-C-53025 |
SNPs | Gene Info |
| Hs.197071 | NEK6 | NIMA (never in mitosis gene a)-related kinase 6 | CGAP-C-48019 |
SNPs | Gene Info |
| Hs.179522 | SLC2A8 | Solute carrier family 2 (facilitated glucose transporter), member 8 | CGAP-C-47863 CGAP-C-263829 |
SNPs | Gene Info |
| Hs.335084 | FPGS | Folylpolyglutamate synthase | CGAP-C-55088 |
SNPs | Gene Info |
| Hs.129963 | - | Transcribed locus | CGAP-C-260055 |
SNPs | Gene Info |
| Hs.522401 | FAM129B | Family with sequence similarity 129, member B | CGAP-C-50132 |
SNPs | Gene Info |
| Hs.76753 | ENG | Endoglin | CGAP-C-614898 |
SNPs | Gene Info |
| Hs.605502 | HSPA5 | Heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | CGAP-C-50855 CGAP-C-58506 |
SNPs | Gene Info |
| Hs.150423 | CDK9 | Cyclin-dependent kinase 9 | CGAP-C-51157 |
SNPs | Gene Info |
| Hs.495138 | MAPKAP1 | Mitogen-activated protein kinase associated protein 1 | CGAP-C-48075 |
SNPs | Gene Info |
| Hs.408054 | RPL12 | Ribosomal protein L12 | CGAP-C-266187 |
SNPs | Gene Info |
| Hs.653262 | ANGPTL2 | Angiopoietin-like 2 | CGAP-C-52665 |
SNPs | Gene Info |
| Hs.568044 | FAM102A | Family with sequence similarity 102, member A | CGAP-C-50727 |
SNPs | Gene Info |
| Hs.495219 | PTGES2 | Prostaglandin E synthase 2 | CGAP-C-602178 |
SNPs | Gene Info |
| Hs.129055 | ODF2 | Outer dense fiber of sperm tails 2 | CGAP-C-256939 |
SNPs | Gene Info |
| Hs.495230 | CERCAM | Cerebral endothelial cell adhesion molecule | CGAP-C-48580 CGAP-C-49370 CGAP-C-628384 |
SNPs | Gene Info |
| Hs.622865 | PRSS2 | Protease, serine, 2 (trypsin 2) | CGAP-C-61223 |
SNPs | Gene Info |
| Hs.654498 | PRSS1 | Protease, serine, 1 (trypsin 1) | CGAP-C-47947 CGAP-C-47948 |
SNPs | Gene Info |
| Hs.495240 | WDR34 | WD repeat domain 34 | CGAP-C-607339 CGAP-C-607340 |
SNPs | Gene Info |
| Hs.308340 | NUP188 | Nucleoporin 188kDa | CGAP-C-612446 |
SNPs | Gene Info |
| Hs.147950 | ZER1 | Zer-1 homolog (C. elegans) | CGAP-C-52006 CGAP-C-268890 |
SNPs | Gene Info |
| Hs.155827 | GOLGA2 | Golgi autoantigen, golgin subfamily a, 2 | CGAP-C-55671 |
SNPs | Gene Info |
| Hs.643600 | LRRC8A | Leucine rich repeat containing 8 family, member A | CGAP-C-53043 |
SNPs | Gene Info |
| Hs.3376 | TBC1D13 | TBC1 domain family, member 13 | CGAP-C-64571 |
SNPs | Gene Info |
| Hs.495250 | CCBL1 | Cysteine conjugate-beta lyase, cytoplasmic | CGAP-C-623924 |
SNPs | Gene Info |
| Predicted SNPs | |||||
| Hs.494892 | COL27A1 | Collagen, type XXVII, alpha 1 | CGAP-C-2416065 |
SNPs | Gene Info |
| Hs.643599 | PAPPA | Pregnancy-associated plasma protein A, pappalysin 1 | CGAP-C-2409103 CGAP-C-2409105 CGAP-C-2409106 CGAP-C-2409108 CGAP-C-2409109 |
SNPs | Gene Info |
| Hs.522356 | ORM1 | Orosomucoid 1 | CGAP-C-2389347 CGAP-C-2389359 CGAP-C-2389360 CGAP-C-2389361 CGAP-C-2389362 CGAP-C-2389363 CGAP-C-2389364 CGAP-C-2389365 CGAP-C-2389366 CGAP-C-2389367 CGAP-C-2389368 CGAP-C-2389369 CGAP-C-2389370 CGAP-C-2389371 CGAP-C-2389372 CGAP-C-2389373 CGAP-C-2395713 |
SNPs | Gene Info |
| Hs.591910 | TRIM32 | Tripartite motif-containing 32 | CGAP-C-2485004 |
SNPs | Gene Info |
| Hs.658575 | C9orf80 | Chromosome 9 open reading frame 80 | CGAP-C-2483298 CGAP-C-2483299 |
SNPs | Gene Info |
| Hs.494875 | RGS3 | Regulator of G-protein signaling 3 | CGAP-C-2463200 CGAP-C-2463209 CGAP-C-2463210 |
SNPs | Gene Info |
| Hs.460124 | PHF19 | PHD finger protein 19 | CGAP-C-2431298 CGAP-C-2431300 |
SNPs | Gene Info |
| Hs.193725 | PSMD5 | Proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 | CGAP-C-2439143 CGAP-C-2439145 CGAP-C-2439146 CGAP-C-2439150 |
SNPs | Gene Info |
| Hs.253903 | STOM | Stomatin | CGAP-C-2413651 CGAP-C-2413658 |
SNPs | Gene Info |
| Hs.97469 | GGTA1 | Glycoprotein, alpha-galactosyltransferase 1 | CGAP-C-2477161 |
SNPs | Gene Info |
| Hs.371563 | RAB14 | RAB14, member RAS oncogene family | CGAP-C-2443192 CGAP-C-2443196 |
SNPs | Gene Info |
| Hs.522373 | GSN | Gelsolin (amyloidosis, Finnish type) | CGAP-C-2433830 CGAP-C-2433835 |
SNPs | Gene Info |
| Hs.201978 | PTGS1 | Prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) | CGAP-C-2455942 CGAP-C-2455943 |
SNPs | Gene Info |
| Hs.708072 | STRBP | Chromosome 9 open reading frame 45 | CGAP-C-2485279 CGAP-C-2485280 |
SNPs | Gene Info |
| Hs.495039 | NDUFA8 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa | CGAP-C-2402032 CGAP-C-2402033 |
SNPs | Gene Info |
| Hs.587481 | - | MRNA full length insert cDNA clone EUROIMAGE 1652049 | CGAP-C-2471505 |
SNPs | Gene Info |
| Hs.271341 | RABGAP1 | RAB GTPase activating protein 1 | CGAP-C-2405494 CGAP-C-2405496 |
SNPs | Gene Info |
| Hs.568340 | DENND1A | DENN/MADD domain containing 1A | CGAP-C-2418610 |
SNPs | Gene Info |
| Hs.415842 | RBM18 | RNA binding motif protein 18 | CGAP-C-2462422 CGAP-C-2462425 |
SNPs | Gene Info |
| Hs.213470 | PSMB7 | Proteasome (prosome, macropain) subunit, beta type, 7 | CGAP-C-2419367 CGAP-C-2419368 |
SNPs | Gene Info |
| Hs.533499 | RC3H2 | Ring finger and CCCH-type zinc finger domains 2 | CGAP-C-2456623 |
SNPs | Gene Info |
| Hs.715605 | PPP6C | Protein phosphatase 6, catalytic subunit | CGAP-C-2409524 |
SNPs | Gene Info |
| Hs.657526 | - | Transcribed locus, strongly similar to NP_001028856.1 chaperonin containing Tcp1, subunit 6A (zeta 1) [Rattus norvegicus] | CGAP-C-2477454 |
SNPs | Gene Info |
| Hs.197071 | NEK6 | NIMA (never in mitosis gene a)-related kinase 6 | CGAP-C-2481744 CGAP-C-2481746 CGAP-C-2481747 CGAP-C-2481748 |
SNPs | Gene Info |
| Hs.132499 | ARPC5L | Actin related protein 2/3 complex, subunit 5-like | CGAP-C-2456539 CGAP-C-2456540 CGAP-C-2456543 CGAP-C-2456544 CGAP-C-2456545 |
SNPs | Gene Info |
| Hs.175473 | AK1 | Adenylate kinase 1 | CGAP-C-2433588 |
SNPs | Gene Info |
| Hs.133469 | GOLGA1 | Golgi autoantigen, golgin subfamily a, 1 | CGAP-C-2477457 |
SNPs | Gene Info |
| Hs.357004 | OLFML2A | Olfactomedin-like 2A | CGAP-C-2388272 CGAP-C-2388273 CGAP-C-2388274 |
SNPs | Gene Info |
| Hs.653265 | PTRH1 | Peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) | CGAP-C-2402793 |
SNPs | Gene Info |
| Hs.179522 | SLC2A8 | Solute carrier family 2 (facilitated glucose transporter), member 8 | CGAP-C-2470325 CGAP-C-2470326 |
SNPs | Gene Info |
| Hs.335084 | FPGS | Folylpolyglutamate synthase | CGAP-C-2399300 CGAP-C-2399301 CGAP-C-2399303 CGAP-C-2399307 |
SNPs | Gene Info |
| Hs.495188 | LRSAM1 | Leucine rich repeat and sterile alpha motif containing 1 | CGAP-C-2468054 CGAP-C-2468055 CGAP-C-2468056 |
SNPs | Gene Info |
| Hs.522401 | FAM129B | Family with sequence similarity 129, member B | CGAP-C-2474721 |
SNPs | Gene Info |
| Hs.605502 | HSPA5 | Heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | CGAP-C-2435810 CGAP-C-2435818 CGAP-C-2435822 CGAP-C-2435823 |
SNPs | Gene Info |
| Hs.150423 | CDK9 | Cyclin-dependent kinase 9 | CGAP-C-2453939 |
SNPs | Gene Info |
| Hs.495138 | MAPKAP1 | Mitogen-activated protein kinase associated protein 1 | CGAP-C-2410933 CGAP-C-2410935 |
SNPs | Gene Info |
| Hs.162659 | FAM125B | Family with sequence similarity 125, member B | CGAP-C-2480654 CGAP-C-2480655 CGAP-C-2480656 |
SNPs | Gene Info |
| Hs.647018 | CLIP2 | CAP-GLY domain containing linker protein 2 | CGAP-C-2419043 CGAP-C-2419045 |
SNPs | Gene Info |
| Hs.408054 | RPL12 | Ribosomal protein L12 | CGAP-C-2447462 CGAP-C-2447494 CGAP-C-2447495 CGAP-C-2447496 CGAP-C-2447499 CGAP-C-2447500 CGAP-C-2447501 CGAP-C-2447502 CGAP-C-2447504 CGAP-C-2447506 CGAP-C-2447510 |
SNPs | Gene Info |
| Hs.653262 | ANGPTL2 | Angiopoietin-like 2 | CGAP-C-2480001 CGAP-C-2480002 |
SNPs | Gene Info |
| Hs.108973 | DPM2 | Dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit | CGAP-C-2433599 CGAP-C-2433600 CGAP-C-2433601 |
SNPs | Gene Info |
| Hs.432842 | - | Transcribed locus | CGAP-C-2462405 |
SNPs | Gene Info |
| Hs.568044 | FAM102A | Family with sequence similarity 102, member A | CGAP-C-2436277 CGAP-C-2436278 CGAP-C-2436279 CGAP-C-2436280 CGAP-C-2436281 CGAP-C-2436283 CGAP-C-2436284 |
SNPs | Gene Info |
| Hs.288229 | STXBP1 | Syntaxin binding protein 1 | CGAP-C-2397056 CGAP-C-2397057 |
SNPs | Gene Info |
| Hs.109672 | ST6GALNAC6 | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 | CGAP-C-2405990 CGAP-C-2405991 CGAP-C-2405992 |
SNPs | Gene Info |
| Hs.5476 | SLC25A25 | Solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 | CGAP-C-2443849 |
SNPs | Gene Info |
| Hs.103137 | LHX6 | LIM homeobox 6 | CGAP-C-2409829 |
SNPs | Gene Info |
| Hs.373606 | NAIF1 | Nuclear apoptosis inducing factor 1 | CGAP-C-2427945 |
SNPs | Gene Info |
| Hs.495219 | PTGES2 | Prostaglandin E synthase 2 | CGAP-C-2408621 CGAP-C-2408629 CGAP-C-2408630 |
SNPs | Gene Info |
| Hs.204238 | LCN2 | Lipocalin 2 | CGAP-C-2410774 CGAP-C-2410775 |
SNPs | Gene Info |
| Hs.495230 | CERCAM | Cerebral endothelial cell adhesion molecule | CGAP-C-2442308 CGAP-C-2442314 CGAP-C-2442315 CGAP-C-2442316 |
SNPs | Gene Info |
| Hs.522412 | C9orf16 | Chromosome 9 open reading frame 16 | CGAP-C-2390475 CGAP-C-2390476 |
SNPs | Gene Info |
| Hs.622865 | PRSS2 | Protease, serine, 2 (trypsin 2) | CGAP-C-2422715 CGAP-C-2422717 CGAP-C-2422718 |
SNPs | Gene Info |
| Hs.654498 | PRSS1 | Protease, serine, 1 (trypsin 1) | CGAP-C-2439656 CGAP-C-2439658 CGAP-C-2439659 CGAP-C-2439666 CGAP-C-2439672 CGAP-C-2439673 CGAP-C-2439678 |
SNPs | Gene Info |
| Hs.632685 | TRUB2 | TruB pseudouridine (psi) synthase homolog 2 (E. coli) | CGAP-C-2392327 CGAP-C-2392328 CGAP-C-2392330 CGAP-C-2392331 |
SNPs | Gene Info |
| Hs.495229 | URM1 | Ubiquitin related modifier 1 homolog (S. cerevisiae) | CGAP-C-2396933 CGAP-C-2396938 CGAP-C-2396941 CGAP-C-2396943 |
SNPs | Gene Info |
| Hs.98541 | COQ4 | Coenzyme Q4 homolog (S. cerevisiae) | CGAP-C-2420581 |
SNPs | Gene Info |
| Hs.522418 | GLE1 | GLE1 RNA export mediator homolog (yeast) | CGAP-C-2489742 CGAP-C-2489743 CGAP-C-2489746 CGAP-C-2489747 CGAP-C-2489748 CGAP-C-2489750 |
SNPs | Gene Info |
| Hs.224137 | C9orf114 | Chromosome 9 open reading frame 114 | CGAP-C-2390554 CGAP-C-2390555 CGAP-C-2390557 CGAP-C-2390558 CGAP-C-2409741 CGAP-C-2409742 |
SNPs | Gene Info |
| Hs.300485 | PKN3 | Protein kinase N3 | CGAP-C-2448956 |
SNPs | Gene Info |
| Hs.495240 | WDR34 | WD repeat domain 34 | CGAP-C-2415376 CGAP-C-2415385 |
SNPs | Gene Info |
| Hs.308340 | NUP188 | Nucleoporin 188kDa | CGAP-C-2415552 |
SNPs | Gene Info |
| Hs.12068 | CRAT | Carnitine acetyltransferase | CGAP-C-2478042 |
SNPs | Gene Info |
| Hs.147950 | ZER1 | Zer-1 homolog (C. elegans) | CGAP-C-2417444 |
SNPs | Gene Info |
| Hs.372331 | SPTAN1 | Spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) | CGAP-C-2479937 CGAP-C-2479952 |
SNPs | Gene Info |
| Hs.709447 | PHYHD1 | Phytanoyl-CoA dioxygenase domain containing 1 | CGAP-C-2488847 |
SNPs | Gene Info |
| Hs.643600 | LRRC8A | Leucine rich repeat containing 8 family, member A | CGAP-C-2399128 CGAP-C-2399129 CGAP-C-2399131 |
SNPs | Gene Info |
| Hs.3376 | TBC1D13 | TBC1 domain family, member 13 | CGAP-C-2443836 CGAP-C-2443837 |
SNPs | Gene Info |
| Hs.21701 | DOLPP1 | Dolichyl pyrophosphate phosphatase 1 | CGAP-C-2473920 |
SNPs | Gene Info |
| Comments, questions and suggestions to: Bob Clifford ( clifforr@mail.nih.gov ) |