Xylella fastidiosa 9a5c

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178039-178138 (1-100) [178139-178238 (101-200)] 178239-178338 (201-300) 178339-178438 (301-400) 178439-178538 (401-500)
178539-178638 (501-600) 178639-178738 (601-700) 178739-178838 (701-800) 178839-178938 (801-900) 178939-179038 (901-1000)
179039-179138 (1001-1100) 179139-179238 (1101-1200) 179239-179338 (1201-1300) 179339-179438 (1301-1400) 179439-179538 (1401-1500)
179539-179638 (1501-1600) 179639-179738 (1601-1700) 179739-179838 (1701-1800) 179839-179938 (1801-1900) 179939-180038 (1901-2000)
180039-180138 (2001-2100) 180139-180238 (2101-2200) 180239-180338 (2201-2300) 180339-180438 (2301-2400) 180439-180538 (2401-2500)
180539-180638 (2501-2600) 180639-180738 (2601-2700) 180739-180804 (2701-2766)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178139 hypothetical XF0101 hypothetical protein genbank 77747486 NP_297394.2 65 99079 99276
178140 hypothetical XF0102 hypothetical protein
similar to GI|3860904 (percent identity: 32 %/query alignment coverage: 91.0 %/subject alignment coverage: 87.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836707 NP_297395.1 376 99277 100407
178141 hypothetical XF0103 membrane protein
similar to GI|1549377 (percent identity: 25 %/query alignment coverage: 84.0 %/subject alignment coverage: 79.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836708 NP_297396.1 443 100388 101719
178142 hypothetical XF0104 lipid A biosynthesis lauroyl acyltransferase
Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA
genbank 15836709 NP_297397.1 279 101904 102743
178143 hypothetical XF0105 3-deoxy-D-manno-octulosonic-acid transferase
Catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid
genbank 15836710 NP_297398.1 448 102867 104213
178144 hypothetical XF0106 hypothetical protein genbank 15836711 NP_297399.1 460 104597 105979
178145 hypothetical XF0107 30S ribosomal protein S16
Required for ribosome assembly
genbank 15836712 NP_297400.1 86 106195 106455
178146 hypothetical XF0108 16S rRNA-processing protein
An accessory protein needed for efficient assembly of the 30S subunit prior to the maturation of 16S rRNA
genbank 15836713 NP_297401.1 170 106499 107011
178147 trmD hypothetical XF0109 tRNA (guanine-N(1)-)-methyltransferase
methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
genbank 15836714 NP_297402.1 261 107121 107906
178148 hypothetical XF0110 50S ribosomal protein L19
This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
genbank 15836715 NP_297403.1 136 108071 108481
178149 hypothetical XF0111 methionine aminopeptidase
catalyzes the removal of N-terminal amino acids from peptides and arylamides
genbank 15836716 NP_297404.1 259 108906 109685
178150 hypothetical XF0112 hypothetical protein genbank 15836717 NP_297405.1 64 109735 109929
178151 hypothetical XF0113 hypothetical protein genbank 15836718 NP_297406.1 55 110043 110210
178152 hypothetical XF0114 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
similar to SP|Q9ZEX2 (percent identity: 60 %/query alignment coverage: 90.0 %/subject alignment coverage: 98.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 77747487 NP_297407.2 285 110413 111270
178153 hypothetical XF0115 hypothetical protein
similar to SP|P24178 (percent identity: 42 %/query alignment coverage: 93.5 %/subject alignment coverage: 98.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836720 NP_297408.1 124 111267 111641
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178154 hypothetical XF0116 succinyl-diaminopimelate desuccinylase
catalyzes the formation of LL-2,6-diaminoheptanedioate and succinate from N-succinyl-LL-2,6-diaminoheptanedioate
genbank 15836721 NP_297409.1 377 111713 112846
178155 hypothetical XF0117 hypothetical protein
hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -36
genbank 15836722 NP_297410.1 53 112932 113093
178156 asnB hypothetical XF0118 asparagine synthetase B
functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP
genbank 15836723 NP_297411.1 563 113246 114937
178157 hypothetical XF0119 hypothetical protein genbank 15836724 NP_297412.1 342 114995 116023
178158 hypothetical XF0120 hypothetical protein genbank 15836725 NP_297413.1 51 116775 116930
178159 hypothetical XF0121 hypothetical protein
similar to GI|2624303 (percent identity: 43 %/query alignment coverage: 97.1 %/subject alignment coverage: 96.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836726 NP_297414.1 343 117045 118076
178160 hypothetical XF0122 LexA repressor
Represses a number of genes involved in the response to DNA damage
genbank 15836727 NP_297415.1 223 118513 119184
178161 recA hypothetical XF0123 recombinase A
catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
genbank 15836728 NP_297416.1 347 119366 120409
178162 hypothetical XF0124 alanyl-tRNA synthetase
Catalyzes a two-step reaction, first charging an alanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
genbank 15836729 NP_297417.1 916 120812 123562
178163 hypothetical XF0125 carbon storage regulator
post-transcriptional regulator thatrepresses gluconeogenisis andglycogen synthesis, and activatesglycolysis and flagella biosynthesis
genbank 15836730 NP_297418.1 76 123686 123916
178164 hypothetical XF0126 hypothetical protein genbank 15836731 NP_297419.1 59 124421 124600
178165 hypothetical XF0127 oligopeptidase A
similar to SP|P27237 (percent identity: 50 %/query alignment coverage: 101.0 %/subject alignment coverage: 100.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836732 NP_297420.1 674 125027 127051
178166 hypothetical XF0128 cysteine synthase
similar to SP|P55708 (percent identity: 27 %/query alignment coverage: 87.9 %/subject alignment coverage: 102.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836733 NP_297421.1 390 127111 128283
178167 hypothetical XF0129 hypothetical protein genbank 15836734 NP_297422.1 65 128287 128484
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178168 hypothetical XF0130 hypothetical protein genbank 15836735 NP_297423.1 56 128544 128714
178169 hypothetical XF0131 hypothetical protein genbank 77747488 NP_297424.2 125 128737 129114
178170 hypothetical XF0132 copper resistance protein A precursor
similar to GI|1073083 (percent identity: 61 %/query alignment coverage: 101.1 %/subject alignment coverage: 97.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836737 NP_297425.1 611 129202 131037
178171 hypothetical XF0133 copper resistance protein B precursor
similar to SP|P12375 (percent identity: 38 %/query alignment coverage: 91.7 %/subject alignment coverage: 90.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -117
genbank 15836738 NP_297426.1 324 131034 132008
178172 hypothetical XF0134 valyl-tRNA synthetase
catalyzes the formation of valyl-tRNA(Val) from valine and tRNA(Val)
genbank 15836739 NP_297427.1 994 132265 135249
178173 hypothetical XF0135 hypothetical protein genbank 15836740 NP_297428.1 64 135299 135493
178174 hypothetical XF0136 DNA polymerase III subunit chi
binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB
genbank 15836741 NP_297429.1 141 135537 135962
178175 hypothetical XF0137 hypothetical protein genbank 15836742 NP_297430.1 155 135962 136429
178176 hypothetical XF0138 leucyl aminopeptidase
catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
genbank 15836743 NP_297431.1 491 136408 137883
178177 hypothetical XF0139 hypothetical protein
similar to SP|P39340 (percent identity: 29 %/query alignment coverage: 96.4 %/subject alignment coverage: 95.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 180
genbank 15836744 NP_297432.1 361 137993 139078
178178 hypothetical XF0140 hypothetical protein
similar to SP|P39341 (percent identity: 30 %/query alignment coverage: 98.6 %/subject alignment coverage: 100.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 96
genbank 15836745 NP_297433.1 368 139075 140181
178179 hypothetical XF0141 D-fructose-6-phosphate amidotransferase
Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
genbank 15836746 NP_297434.1 609 141125 142954
178180 hypothetical XF0142 hypothetical protein
similar to GI|3132262 (percent identity: 22 %/query alignment coverage: 99.0 %/subject alignment coverage: 114.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836747 NP_297435.1 399 143187 144386
178181 hypothetical XF0143 spermidine synthase
catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
genbank 15836748 NP_297436.1 285 144696 145553
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178182 hypothetical XF0144 arginine decarboxylase
catalyzes the fromation of agmatine from arginine in putrescine and spermidine biosynthesis
genbank 15836749 NP_297437.1 628 145789 147675
178183 hypothetical XF0145 oxidoreductase
similar to SP|P39831 (percent identity: 50 %/query alignment coverage: 98.4 %/subject alignment coverage: 99.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836750 NP_297438.1 251 147702 148457
178184 hypothetical XF0146 hypothetical protein genbank 77747489 NP_297439.2 248 148592 149338
178185 hypothetical XF0147 arginyl-tRNA synthetase
Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
genbank 15836752 NP_297440.1 586 149378 151138
178186 hypothetical XF0148 DNA repair protein RadC
Involved in repair of DNA damage after UV and X-ray irradiation in prokaryotes
genbank 15836753 NP_297441.1 232 151195 151893
178187 hypothetical XF0149 phosphopantothenoylcysteine synthase/decarboxylase
catalyzes the conversion of 4'-phosphopantothenate to 4'-phosphopantetheine
genbank 15836754 NP_297442.1 409 151968 153197
178188 hypothetical XF0150 deoxyuridine 5'-triphosphate nucleotidohydrolase
catalyzes the formation of dUMP from dUTP
genbank 15836755 NP_297443.1 155 153194 153661
178189 hypothetical XF0151 phosphomannomutase
similar to SP|P26276 (percent identity: 45 %/query alignment coverage: 96.8 %/subject alignment coverage: 97.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 1017
genbank 77747490 NP_297444.2 464 154644 156038
178190 hypothetical XF0152 hypothetical protein genbank 15836757 NP_297445.1 190 156052 156624
178191 pyrE hypothetical XF0153 orotate phosphoribosyltransferase
involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
genbank 15836758 NP_297446.1 219 156755 157414
178192 hypothetical XF0154 hypothetical protein genbank 15836759 NP_297447.1 155 157666 158133
178193 hypothetical XF0155 hypothetical protein genbank 15836760 NP_297448.1 295 158177 159064
178194 hypothetical XF0156 cysteine protease
similar to GI|1763663 (percent identity: 28 %/query alignment coverage: 89.7 %/subject alignment coverage: 81.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836761 NP_297449.1 271 159327 160142
178195 hypothetical XF0157 hypothetical protein genbank 15836762 NP_297450.1 63 160688 160879
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178196 hypothetical XF0158 hypothetical protein genbank 15836763 NP_297451.1 52 161214 161372
178197 hypothetical XF0159 hypothetical protein genbank 15836764 NP_297452.1 116 161369 161719
178198 hypothetical XF0160 hypothetical protein genbank 15836765 NP_297453.1 184 161774 162328
178199 hypothetical XF0161 hypothetical protein
similar to GI|1064792 (percent identity: 17 %/query alignment coverage: 93.5 %/subject alignment coverage: 96.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836766 NP_297454.1 602 162520 164328
178200 hypothetical XF0162 hypothetical protein genbank 15836767 NP_297455.1 44 164426 164560
178201 hypothetical XF0163 hypothetical protein genbank 15836768 NP_297456.1 31 164881 164976
178202 hypothetical XF0164 exodeoxyribonuclease
similar to GI|6138859 (percent identity: 43 %/query alignment coverage: 103.0 %/subject alignment coverage: 100.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836769 NP_297457.1 266 165137 165937
178203 hypothetical XF0165 beta-lactamase induction signal transducer protein
similar to SP|P36670 (percent identity: 38 %/query alignment coverage: 55.2 %/subject alignment coverage: 57.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836770 NP_297458.1 509 165934 167463
178204 hypothetical XF0166 hypothetical protein
similar to SP|P77570 (percent identity: 48 %/query alignment coverage: 96.3 %/subject alignment coverage: 99.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836771 NP_297459.1 381 167622 168767
178205 hypothetical XF0167 hypothetical protein
similar to GI|3860964 (percent identity: 33 %/query alignment coverage: 90.2 %/subject alignment coverage: 82.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 77747491 NP_297460.2 471 168828 170243
178206 hypothetical XF0168 hypothetical protein genbank 15836773 NP_297461.1 38 170178 170294
178207 hypothetical XF0169 tyrosyl-tRNA synthetase
catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
genbank 15836774 NP_297462.1 418 170444 171700
178208 hypothetical XF0170 formamidopyrimidine-DNA glycosylase
Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
genbank 15836775 NP_297463.1 271 177524 178339
178209 hypothetical XF0171 hypothetical protein
similar to GI|1788964 (percent identity: 28 %/query alignment coverage: 85.1 %/subject alignment coverage: 83.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836776 NP_297464.1 282 178471 179319
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178210 hypothetical XF0172 hypothetical protein genbank 77747492 NP_297465.2 635 179767 181674
178211 fabG hypothetical XF0173 3-ketoacyl-(acyl-carrier-protein) reductase
Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
genbank 15836778 NP_297466.1 251 182075 182830
178212 hypothetical XF0174 peptide chain release factor 3
Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2
genbank 15836779 NP_297467.1 548 183329 184975
178213 hypothetical XF0175 hemolysin III protein
similar to SP|P54176 (percent identity: 48 %/query alignment coverage: 94.9 %/subject alignment coverage: 92.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836780 NP_297468.1 214 185058 185702
178214 hypothetical XF0176 sugar transferase
similar to GI|3395543 (percent identity: 43 %/query alignment coverage: 79.4 %/subject alignment coverage: 62.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836781 NP_297469.1 378 185927 187063
178215 hypothetical XF0177 hypothetical protein
similar to SP|P39408 (percent identity: 36 %/query alignment coverage: 97.3 %/subject alignment coverage: 97.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836782 NP_297470.1 260 187211 187993
178216 hypothetical XF0178 hypothetical protein
similar to SP|P37796 (percent identity: 33 %/query alignment coverage: 59.5 %/subject alignment coverage: 85.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836783 NP_297471.1 257 188341 189114
178217 hypothetical XF0179 hypothetical protein genbank 15836784 NP_297472.1 30 189124 189216
178218 hypothetical XF0180 hypothetical protein genbank 15836785 NP_297473.1 153 189953 190414
178219 hypothetical XF0181 glycine cleavage system protein H
part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to
genbank 15836786 NP_297474.1 144 191779 192213
178220 hypothetical XF0182 hypothetical protein genbank 15836787 NP_297475.1 44 192282 192416
178221 hypothetical XF0183 aminomethyltransferase
catalyzes the formation of dihydrolipoylprotein from S-aminomethyldihydrolipoprotein in the glycine cleavage system
genbank 15836788 NP_297476.1 368 192696 193802
178222 hypothetical XF0184 hypothetical protein
similar to GI|6459935 (percent identity: 35 %/query alignment coverage: 93.1 %/subject alignment coverage: 84.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836789 NP_297477.1 144 193945 194379
178223 hypothetical XF0185 hypothetical protein
similar to GI|6459936 (percent identity: 60 %/query alignment coverage: 92.0 %/subject alignment coverage: 90.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836790 NP_297478.1 337 194380 195393
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178224 hypothetical XF0186 hypothetical protein
similar to SP|P33646 (percent identity: 42 %/query alignment coverage: 94.9 %/subject alignment coverage: 100.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836791 NP_297479.1 277 195671 196504
178225 hypothetical XF0187 sulfite synthesis pathway protein
similar to SP|P22255 (percent identity: 45 %/query alignment coverage: 89.7 %/subject alignment coverage: 99.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 77747493 NP_297480.2 266 196538 197338
178226 hypothetical XF0188 hypothetical protein
similar to SP|P45799 (percent identity: 46 %/query alignment coverage: 95.7 %/subject alignment coverage: 95.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 75
genbank 15836793 NP_297481.1 185 197335 197892
178227 hypothetical XF0189 adenosylmethionine--8-amino-7-oxononanoate transaminase
catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate
genbank 15836794 NP_297482.1 486 197922 199382
178228 hypothetical XF0190 hypothetical protein
similar to SP|P44627 (percent identity: 40 %/query alignment coverage: 100.8 %/subject alignment coverage: 100.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836795 NP_297483.1 244 199373 200107
178229 hypothetical XF0191 hypothetical protein genbank 15836796 NP_297484.1 35 200292 200399
178230 hypothetical XF0192 ATP-dependent RNA helicase
similar to SP|P25888 (percent identity: 52 %/query alignment coverage: 96.4 %/subject alignment coverage: 94.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836797 NP_297485.1 446 201673 203013
178231 hypothetical XF0193 6-pyruvoyl tetrahydrobiopterin synthase
similar to SP|Q46903 (percent identity: 63 %/query alignment coverage: 93.5 %/subject alignment coverage: 95.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836798 NP_297486.1 123 203079 203450
178232 hypothetical XF0194 hypothetical protein genbank 15836799 NP_297487.1 52 203611 203769
178233 hypothetical XF0195 hypothetical protein genbank 15836800 NP_297488.1 67 203937 204140
178234 hypothetical XF0196 hypothetical protein
similar to GI|5139534 (percent identity: 22 %/query alignment coverage: 92.5 %/subject alignment coverage: 93.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836801 NP_297489.1 174 204523 205047
178235 hypothetical XF0197 hypothetical protein
similar to GI|6460343 (percent identity: 35 %/query alignment coverage: 75.9 %/subject alignment coverage: 83.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836802 NP_297490.1 220 205540 206202
178236 hypothetical XF0198 hypothetical protein genbank 15836803 NP_297491.1 54 206470 206634
178237 hypothetical XF0199 hypothetical protein
similar to GI|3328851 (percent identity: 30 %/query alignment coverage: 87.7 %/subject alignment coverage: 88.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
genbank 15836804 NP_297492.1 235 206814 207521
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
178238 hypothetical XF0200 hypothetical protein genbank 15836805 NP_297493.1 31 207720 207815


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