BLASTP 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= SPy_0696 phage associated protein
(193 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,515,104 sequences; 2,222,278,849 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_268932.1| conserved hypothetical protein, phage asso... 387 e-106
ref|YP_280702.1| phage protein [Streptococcus pyogenes MGAS... 383 e-105
ref|NP_438153.1| hypothetical protein [Temperate phage PhiN... 382 e-105
ref|YP_001128099.1| putative phage Gp15 protein [Streptococ... 345 8e-94
ref|NP_607788.1| hypothetical protein spyM18_1764 [Streptoc... 341 2e-92
ref|ZP_01831622.1| phage protein [Streptococcus pneumoniae ... 184 4e-45
ref|NP_150174.1| hypothetical protein MM1p45 [Streptococcus... 182 8e-45
gb|AAZ82456.1| hypothetical protein [Streptococcus pneumoni... 182 9e-45
ref|YP_001693536.1| phage protein [Streptococcus pneumoniae... 182 1e-44
ref|YP_164426.1| hypothetical protein BCBBV1cgp48 [Bacillus... 170 5e-41
ref|ZP_02277916.1| Protein gp15 [Listeria monocytogenes FSL... 110 5e-23
ref|NP_469463.1| Protein gp15 [Listeria innocua Clip11262] ... 110 6e-23
ref|ZP_01928231.1| protein gp15 (Bacteriophage A118) [Liste... 108 2e-22
ref|ZP_01941264.1| protein gp15 (Bacteriophage A118) [Liste... 108 2e-22
ref|NP_463476.1| gp15 [Listeria phage A118] >gi|16804327|re... 107 5e-22
ref|ZP_01944694.1| protein gp15 (Bacteriophage A118) [Liste... 105 1e-21
ref|ZP_01944693.1| Protein gp15 (Bacteriophage A118) [Liste... 99 1e-19
ref|ZP_02280638.1| Protein gp15 [Listeria monocytogenes FSL... 90 7e-17
ref|NP_695159.1| hypothetical protein phig1ep25 [Lactobacil... 89 1e-16
ref|ZP_02080334.1| hypothetical protein CLOLEP_01787 [Clost... 71 3e-11
ref|ZP_02078739.1| hypothetical protein CLOLEP_00176 [Clost... 70 7e-11
gb|ABD63738.1| unknown [Lactococcus phage ul36.k1t1] >gi|89... 69 2e-10
ref|ZP_00241186.1| protein gp15 [Bacillus cereus G9241] >gi... 60 1e-07
ref|ZP_02234306.1| hypothetical protein DORFOR_01174 [Dorea... 48 4e-04
ref|ZP_02729364.1| hypothetical protein CdifQCD_16750 [Clos... 47 8e-04
ref|ZP_02418143.1| hypothetical protein ANACAC_00711 [Anaer... 43 0.014
ref|ZP_01994790.1| hypothetical protein DORLON_00779 [Dorea... 43 0.014
ref|ZP_01968514.1| hypothetical protein RUMTOR_02091 [Rumin... 42 0.025
ref|ZP_02233885.1| hypothetical protein DORFOR_00737 [Dorea... 41 0.036
ref|ZP_02616054.1| site-specific recombinase [Clostridium b... 39 0.16
ref|ZP_02077421.1| hypothetical protein EUBDOL_01216 [Eubac... 39 0.17
ref|YP_001781730.1| putative protein gp15 [Clostridium botu... 39 0.23
ref|YP_001787263.1| putative protein gp15 [Clostridium botu... 39 0.24
ref|ZP_02637354.1| hypothetical protein AC1_1108 [Clostridi... 38 0.30
ref|ZP_02640265.1| conserved hypothetical protein [Clostrid... 38 0.41
ref|ZP_02432161.1| hypothetical protein CLOSCI_02406 [Clost... 38 0.45
ref|ZP_02640185.1| putative protein gp15 [Clostridium perfr... 37 0.52
ref|NP_001085087.1| hypothetical protein LOC432158 [Xenopus... 36 1.3
ref|YP_001285891.1| hypothetical protein LPLLH_ORF75 [Lacto... 35 2.5
ref|NP_001116498.1| centrosomal protein 290kDa [Xenopus tro... 34 4.6
>ref|NP_268932.1| conserved hypothetical protein, phage associated [Streptococcus
phage 370.1]
ref|YP_600185.1| phage protein [Streptococcus phage 2096.1]
gb|AAK33653.1| conserved hypothetical protein, phage associated [Streptococcus
phage 370.1]
gb|ABF35641.1| phage protein [Bacteriophage 2096.1]
Length = 193
Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/193 (100%), Positives = 193/193 (100%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF
Sbjct: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
Query: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ
Sbjct: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
Query: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK
Sbjct: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
Query: 181 YSLDEREEEDDGS 193
YSLDEREEEDDGS
Sbjct: 181 YSLDEREEEDDGS 193
>ref|YP_280702.1| phage protein [Streptococcus pyogenes MGAS6180]
gb|AAX72347.1| phage protein [Streptococcus pyogenes MGAS6180]
Length = 193
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/193 (98%), Positives = 192/193 (99%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF
Sbjct: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
Query: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ
Sbjct: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
Query: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK
Sbjct: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
Query: 181 YSLDEREEEDDGS 193
YSLD+ EEEDDGS
Sbjct: 181 YSLDDGEEEDDGS 193
>ref|NP_438153.1| hypothetical protein [Temperate phage PhiNIH1.1]
ref|NP_665022.1| hypothetical protein SpyM3_1218 [Streptococcus pyogenes MGAS315]
ref|NP_795589.1| hypothetical protein SpyM3_1218 [Streptococcus pyogenes phage
315.4]
ref|NP_801905.1| hypothetical protein SPs0643 [Streptococcus pyogenes SSI-1]
ref|YP_598923.1| phage protein [Streptococcus pyogenes MGAS10270]
gb|AAL15082.1| hypothetical protein-phage associated [temperate phage PhiNIH1.1]
gb|AAM79825.1| conserved hypothetical protein - phage-associated [Streptococcus
pyogenes MGAS315]
dbj|BAC63738.1| hypothetical protein (phage associated) [Streptococcus pyogenes
SSI-1]
gb|ABF34379.1| phage protein [Streptococcus pyogenes MGAS10270]
Length = 193
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/193 (98%), Positives = 191/193 (98%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF
Sbjct: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
Query: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ
Sbjct: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
Query: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
YQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK
Sbjct: 121 TYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
Query: 181 YSLDEREEEDDGS 193
YSLD+ EEEDDGS
Sbjct: 181 YSLDDGEEEDDGS 193
>ref|YP_001128099.1| putative phage Gp15 protein [Streptococcus pyogenes str. Manfredo]
emb|CAM29859.1| putative phage Gp15 protein [Streptococcus pyogenes str. Manfredo]
Length = 193
Score = 345 bits (886), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 181/193 (93%), Positives = 189/193 (97%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
MKLNDPLVESFEFRGEIY I+LSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF
Sbjct: 1 MKLNDPLVESFEFRGEIYSINLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
Query: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
+YAVDLW++IK N+ID ++PEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ
Sbjct: 61 SYAVDLWIHIKKNYIDTKKPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
Query: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK
Sbjct: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
Query: 181 YSLDEREEEDDGS 193
YSLD+ EEEDDGS
Sbjct: 181 YSLDDGEEEDDGS 193
>ref|NP_607788.1| hypothetical protein spyM18_1764 [Streptococcus pyogenes MGAS8232]
ref|YP_060670.1| unknown phage protein [Streptococcus pyogenes MGAS10394]
gb|AAL98287.1| conserved hypothetical phage protein [Streptococcus pyogenes
MGAS8232]
gb|AAT87487.1| unknown phage protein [Streptococcus pyogenes MGAS10394]
Length = 193
Score = 341 bits (874), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/193 (92%), Positives = 187/193 (96%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
MKLNDPLVESFEFRGEIY I+LSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF
Sbjct: 1 MKLNDPLVESFEFRGEIYSINLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
Query: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
+YAVDLW++IK N+ID ++ EKPQLDIKGNPMPVVKEKEDN+KVIDL LDAEFIYASFRQ
Sbjct: 61 SYAVDLWIHIKKNYIDTKKSEKPQLDIKGNPMPVVKEKEDNEKVIDLRLDAEFIYASFRQ 120
Query: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK
Sbjct: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
Query: 181 YSLDEREEEDDGS 193
YSLDE EEEDDGS
Sbjct: 181 YSLDEGEEEDDGS 193
>ref|ZP_01831622.1| phage protein [Streptococcus pneumoniae SP18-BS74]
gb|EDK67459.1| phage protein [Streptococcus pneumoniae SP18-BS74]
Length = 189
Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
MKLND L+ +F + Y IDLSFNKVLDVF+++ +D + E+ L + +L +
Sbjct: 3 MKLNDALITNFSIADKEYDIDLSFNKVLDVFEILKEDEMTRLEQAQLIVHLLTGQELYDI 62
Query: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
VD W+YIK +F+ E+ E Q D+ GNPMP K++E+ +K+ID DAE+IYASF Q
Sbjct: 63 KEVVDCWIYIKEHFLGIEK-ETVQYDLLGNPMPTAKDEEEQEKLIDFEQDAEYIYASFLQ 121
Query: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
AY INLLK QN+L+W EFKALLNALPD+T+MQ+II IR W+ + G K + MRKL+AK
Sbjct: 122 AYGINLLKSQNKLTWTEFKALLNALPDNTIMQQIIEIRAWKPEYGGDK---NKMRKLQAK 178
Query: 181 YSLDEREEED 190
YSL + E++
Sbjct: 179 YSLGKEGEDN 188
>ref|NP_150174.1| hypothetical protein MM1p45 [Streptococcus phage MM1]
emb|CAC48108.1| hypothetical protein [Streptococcus pneumoniae bacteriophage MM1]
Length = 189
Score = 182 bits (463), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 131/192 (68%), Gaps = 5/192 (2%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
MKLND L+ +F + Y IDLSFNKVLDVF+++ +D + E+ L + +L +
Sbjct: 3 MKLNDALITNFSIADKEYDIDLSFNKVLDVFEILKEDEMTRLEQAQLIVHLLTGQELYDI 62
Query: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
VD W+YIK +F+ E+ E Q D+ GNPMP K +E+ +K+ID DAE+IYASF Q
Sbjct: 63 KEVVDCWIYIKEHFLGIEK-ETVQYDLLGNPMPKAKGEEEQEKLIDFEQDAEYIYASFLQ 121
Query: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
AY INLLK QN L+W EFKALLNALPD+T+MQ+II IR W+ + G K + MRKL+AK
Sbjct: 122 AYGINLLKVQNELTWTEFKALLNALPDNTIMQQIIEIRAWKPEYGGDK---NKMRKLQAK 178
Query: 181 YSLDEREEEDDG 192
YSL +E ED+G
Sbjct: 179 YSLG-KEGEDNG 189
>gb|AAZ82456.1| hypothetical protein [Streptococcus pneumoniae bacteriophage MM1
1998]
Length = 189
Score = 182 bits (462), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 131/192 (68%), Gaps = 5/192 (2%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
MKLND L+ +F + Y IDLSFNKVLDVF+++ +D + E+ L + +L +
Sbjct: 3 MKLNDALITNFSIADKEYDIDLSFNKVLDVFEILKEDEMTRLEQAQLIVHLLTGQELYDI 62
Query: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
VD W+YIK +F+ E+ E Q D+ GNPMP K +E+ +K+ID DAE+IYASF Q
Sbjct: 63 KEVVDCWIYIKEHFLGIEK-ETVQYDLLGNPMPKAKGEEEQEKLIDFEQDAEYIYASFLQ 121
Query: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
AY INLLK QN L+W EFKALLNALPD+T+MQ+II IR W+ + G K + MRKL+AK
Sbjct: 122 AYGINLLKFQNELTWTEFKALLNALPDNTIMQQIIEIRAWKPEYGGDK---NKMRKLQAK 178
Query: 181 YSLDEREEEDDG 192
YSL +E ED+G
Sbjct: 179 YSLG-KEGEDNG 189
>ref|YP_001693536.1| phage protein [Streptococcus pneumoniae Hungary19A-6]
gb|ACA35745.1| phage protein [Streptococcus pneumoniae Hungary19A-6]
Length = 189
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 130/191 (68%), Gaps = 4/191 (2%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
MKLND L+ +F + Y IDLSFNKVLDVF+++ +D + E+ L + +L +
Sbjct: 3 MKLNDALITNFSIADKEYDIDLSFNKVLDVFEILKEDEMTRLEQAQLIVHLLTGQELYDI 62
Query: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
VD W+YIK +F+ E+ E Q D+ GNPMP K +E+ +K+ID DAE+IYASF Q
Sbjct: 63 KEVVDCWIYIKEHFLGIEK-ETVQYDLLGNPMPKAKGEEEQEKLIDFEQDAEYIYASFLQ 121
Query: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
AY INLLK QN L+W EFKALLNALPD+T+MQ+II IR W+ + G K + MRKL+AK
Sbjct: 122 AYGINLLKVQNELTWTEFKALLNALPDNTIMQQIIEIRAWKPEYGGDK---NKMRKLQAK 178
Query: 181 YSLDEREEEDD 191
YSL + E++D
Sbjct: 179 YSLGKEGEDND 189
>ref|YP_164426.1| hypothetical protein BCBBV1cgp48 [Bacillus phage BCJA1c]
gb|AAU85095.1| 48 [Bacillus clarkii bacteriophage BCJA1c]
Length = 187
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 130/192 (67%), Gaps = 5/192 (2%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
M+LNDPL+ SF ++ + Y IDL+F+ VLDVFD ++D + + K +CL +LL+R D
Sbjct: 1 MRLNDPLITSFVYKDQEYAIDLAFDNVLDVFDALNDHDFSISGKIDVCLKLLLNR-DFEG 59
Query: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
A++LW +I FI E ++ + D+KGN MP +++ K++ID DAE+I+ASF+Q
Sbjct: 60 QEAMELWNHIYEEFIHIEDKQRIEYDLKGNLMP----QKEQKRLIDFERDAEYIFASFQQ 115
Query: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
AY +NL KEQ +L W EF+ALLN LP +T+MQRII IR WE S +Y+ M +L+
Sbjct: 116 AYHMNLFKEQGKLHWREFQALLNGLPSNTIMQRIIQIRMWEPQKGDSNEYKQKMLELQKV 175
Query: 181 YSLDEREEEDDG 192
Y+L++ EEE+ G
Sbjct: 176 YALEDPEEEEVG 187
>ref|ZP_02277916.1| Protein gp15 [Listeria monocytogenes FSL J1-194]
Length = 200
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 110/188 (58%), Gaps = 16/188 (8%)
Query: 11 FEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPFTYAVD----- 65
+E+ G+ Y +DL+F+ VL V D+ +D+ L++ + L +D+L D+P+ + +
Sbjct: 12 YEYEGKEYKLDLAFDNVLRVIDLTEDNSLSDVFRANLAIDVLF-ADDMPWPRSNEEDEYA 70
Query: 66 -------LWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSL--DAEFIYA 116
+ + I TN+I E + DI GN MP ED +++ SL DA++IYA
Sbjct: 71 NIEEKSLVLIDIFTNYIVKENDDGLLYDIDGNKMPSATNNEDAEEIASYSLTQDADYIYA 130
Query: 117 SFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWE-DDGEGSKKYRDNMR 175
SF Q Y I+LL + ++ W +F+ALL +L DDT ++ II IRQ E G+G++K R+ +
Sbjct: 131 SFLQDYNIDLLDSRGKMHWYKFRALLESLRDDTTIKTIIGIRQAELPSGKGTEKERNELI 190
Query: 176 KLKAKYSL 183
KLK +Y L
Sbjct: 191 KLKNRYKL 198
>ref|NP_469463.1| Protein gp15 [Listeria innocua Clip11262]
ref|YP_001468401.1| gp15 [Listeria phage A500]
emb|CAC95351.1| Protein gp15 [Bacteriophage A118] [Listeria innocua]
gb|AAY52803.1| gp15 [Listeria phage A500]
Length = 200
Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 110/188 (58%), Gaps = 16/188 (8%)
Query: 11 FEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPFTYAVD----- 65
+E+ G+ Y +DL+F+ VL V D+ +D+ L++ + L +D+L D+P+ + +
Sbjct: 12 YEYEGKEYKLDLAFDNVLRVIDLTEDNSLSDVFRANLAIDVLF-ADDMPWPRSNEEDEYA 70
Query: 66 -------LWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSL--DAEFIYA 116
+ + I TN+I E + DI GN MP ED +++ SL DA++IYA
Sbjct: 71 NIEEKSLVLIDIFTNYIVKENDDGLLYDIDGNKMPSATNNEDAEEIASYSLTQDADYIYA 130
Query: 117 SFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWE-DDGEGSKKYRDNMR 175
SF Q Y I+LL + ++ W +F+ALL +L DDT ++ II IRQ E G+G++K R+ +
Sbjct: 131 SFLQDYNIDLLDSRGKMHWYKFRALLESLRDDTTIKTIIGIRQAELPSGKGTEKERNELI 190
Query: 176 KLKAKYSL 183
KLK +Y L
Sbjct: 191 KLKNRYKL 198
>ref|ZP_01928231.1| protein gp15 (Bacteriophage A118) [Listeria monocytogenes FSL
N1-017]
gb|EBA28079.1| protein gp15 (Bacteriophage A118) [Listeria monocytogenes FSL
N1-017]
Length = 200
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 111/189 (58%), Gaps = 14/189 (7%)
Query: 11 FEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDIL-LDRTDLPFTYAVDLWVY 69
+E+ G+ Y +DL+F+ VL V D+ +D+ L++ + L +D+L +D P + D +
Sbjct: 12 YEYEGKEYKLDLAFDNVLRVIDLTEDNSLSDVFRANLAIDVLFVDDMPWPRSNEEDEYAN 71
Query: 70 IK----------TNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSL--DAEFIYAS 117
I+ TN+I E + DI GN MP +D +++ SL DA++IYAS
Sbjct: 72 IEEKSLVLIDIFTNYIVKENDDGLLYDIDGNKMPSATNNDDVEEIASYSLTQDADYIYAS 131
Query: 118 FRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWE-DDGEGSKKYRDNMRK 176
F Q Y I+LL + ++ W +F+ALL +L DDT ++ II IRQ E G+G++K R+ + K
Sbjct: 132 FLQDYNIDLLDSRGKMHWYKFRALLESLRDDTTIKTIIGIRQAELPSGKGTEKERNELIK 191
Query: 177 LKAKYSLDE 185
LK +Y L++
Sbjct: 192 LKNRYKLND 200
>ref|ZP_01941264.1| protein gp15 (Bacteriophage A118) [Listeria monocytogenes 10403S]
gb|EBA22832.1| protein gp15 (Bacteriophage A118) [Listeria monocytogenes 10403S]
Length = 200
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 109/187 (58%), Gaps = 14/187 (7%)
Query: 11 FEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDIL-LDRTDLPFTYAVDLWVY 69
+E+ G+ Y +DL+F+ VL V ++ +D+ L++ + L +D+L +D P + D +
Sbjct: 12 YEYEGKEYKLDLAFDNVLRVIELTEDNSLSDVFRANLAIDVLFVDDMPWPRSNEEDEYAN 71
Query: 70 IK----------TNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSL--DAEFIYAS 117
I+ TN+I E + DI GN MP ED +++ SL DA++IYAS
Sbjct: 72 IEEKSLVLIDIFTNYIVKENDDGLLYDIDGNKMPSATNNEDAEEIASYSLTQDADYIYAS 131
Query: 118 FRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWE-DDGEGSKKYRDNMRK 176
F Q Y I+LL + ++ W +F+ALL +L DDT ++ II IRQ E G+G++K R+ + K
Sbjct: 132 FLQDYNIDLLDSRGKMHWYKFRALLESLRDDTTIKTIIGIRQAELPSGKGTEKERNELIK 191
Query: 177 LKAKYSL 183
LK +Y L
Sbjct: 192 LKNRYKL 198
>ref|NP_463476.1| gp15 [Listeria phage A118]
ref|NP_465812.1| Protein gp15 [Listeria monocytogenes EGD-e]
ref|ZP_00233592.1| protein gp15 [Listeria monocytogenes str. 1/2a F6854]
ref|ZP_01933431.1| gp15 protein (Bacteriophage A118) [Listeria monocytogenes F6900]
ref|ZP_01936838.1| protein gp15 (Bacteriophage A118) [Listeria monocytogenes J0161]
ref|ZP_01938989.1| protein gp15 (Bacteriophage A118) [Listeria monocytogenes J2818]
ref|ZP_02309879.1| Protein gp15 [Listeria monocytogenes FSL J2-003]
emb|CAB53801.1| gp15 [Listeria phage A118]
emb|CAD00366.1| Protein gp15 [Bacteriophage A118] [Listeria monocytogenes]
gb|EAL06518.1| protein gp15 [Listeria monocytogenes str. 1/2a F6854]
gb|EBA18930.1| protein gp15 (Bacteriophage A118) [Listeria monocytogenes J0161]
gb|EBA25231.1| protein gp15 (Bacteriophage A118) [Listeria monocytogenes J2818]
gb|EBA34165.1| gp15 protein (Bacteriophage A118) [Listeria monocytogenes F6900]
Length = 201
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 17/189 (8%)
Query: 11 FEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPFTYAVD----- 65
+E+ G+ Y +DL+F+ VL V D+ +D+ L++ + L +D+L D+P+ + +
Sbjct: 12 YEYEGKEYKLDLAFDNVLRVIDLTEDNSLSDVFRANLAIDVLF-ADDMPWPRSNEEDEYA 70
Query: 66 -------LWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVI---DLSLDAEFIY 115
+ + I TN+I E + DI GN MP D+ + I L+ DA++IY
Sbjct: 71 NIEEKSLVLIDIFTNYIVKENDDGLLYDIDGNKMPSATNNNDDAEEIASYSLTQDADYIY 130
Query: 116 ASFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWE-DDGEGSKKYRDNM 174
ASF Q Y I+LL + ++ W +F+ALL +L DDT ++ II IRQ E G+G++K R+ +
Sbjct: 131 ASFLQDYNIDLLDSRGKMHWYKFRALLESLRDDTTIKTIIGIRQAELPSGKGTEKERNEL 190
Query: 175 RKLKAKYSL 183
KLK +Y L
Sbjct: 191 IKLKNRYKL 199
>ref|ZP_01944694.1| protein gp15 (Bacteriophage A118) [Listeria monocytogenes HPB2262]
gb|EBA36307.1| protein gp15 (Bacteriophage A118) [Listeria monocytogenes HPB2262]
Length = 201
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 107/189 (56%), Gaps = 17/189 (8%)
Query: 11 FEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPFTYAVD----- 65
+E+ G+ Y +DL+F+ VL V D+ +D+ L+ + L +D+L D+P+ + +
Sbjct: 12 YEYEGKEYKLDLAFDNVLRVIDLTEDNSLSNVFRANLAIDVLF-ADDMPWPRSNEEDKYA 70
Query: 66 -------LWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVI---DLSLDAEFIY 115
+ + I TN+I E + DI GN MP D + I L+ DA++IY
Sbjct: 71 NIEEKSLVLIDIFTNYIVKENDDGLLYDIDGNKMPSATNNNDEAEEIASYSLTQDADYIY 130
Query: 116 ASFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWE-DDGEGSKKYRDNM 174
ASF Q Y I+LL + ++ W +F+ALL +L DDT ++ II IRQ E G+G++K R+ +
Sbjct: 131 ASFLQDYNIDLLDSRGKMHWYKFRALLESLRDDTTIKTIIGIRQAELPSGKGTEKERNEL 190
Query: 175 RKLKAKYSL 183
KLK +Y L
Sbjct: 191 IKLKNRYKL 199
>ref|ZP_01944693.1| Protein gp15 (Bacteriophage A118) [Listeria monocytogenes HPB2262]
gb|EBA36309.1| Protein gp15 (Bacteriophage A118) [Listeria monocytogenes HPB2262]
Length = 199
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 109/196 (55%), Gaps = 13/196 (6%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRT---- 56
+ L D + + + ++ E Y +DLSF+ VL V ++ +++ L + L +D+L +
Sbjct: 2 LSLADGIDDIYVYKNEKYQLDLSFDNVLRVIELTENNQLTNDFRVNLAVDVLFENVMPWN 61
Query: 57 ----DLPFTYAVDLWVY---IKTNFIDAERPEKPQLDIKGNPMP-VVKEKEDNKKVIDLS 108
D PF+ + + I N+I + E Q DI GNPMP E + L+
Sbjct: 62 PYDEDNPFSNIEEKSIVLLDIFENYIVKDNDEGIQCDIDGNPMPSATNEDGEEPAYYSLT 121
Query: 109 LDAEFIYASFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWE-DDGEGS 167
D+++I+ASF Q Y I+L++ + +L W +F+AL +L DDT ++ I++IRQ E G+G+
Sbjct: 122 QDSDYIFASFLQDYNIDLIEVRGKLHWYKFRALFESLRDDTAIKSIMSIRQAELPSGKGT 181
Query: 168 KKYRDNMRKLKAKYSL 183
+K RD + KLK Y L
Sbjct: 182 EKERDALIKLKNHYKL 197
>ref|ZP_02280638.1| Protein gp15 [Listeria monocytogenes FSL F2-515]
Length = 200
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 14/197 (7%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRT---- 56
+ L D + + + ++ E Y +DLSF+ VL V ++ +++ L + L +D+L +
Sbjct: 2 LSLADGIDDIYVYKNEKYQLDLSFDNVLRVIELTENNQLTNDFRVNLAVDVLFENVMPWN 61
Query: 57 ----DLPFTYAVDLWVY---IKTNFIDAERPEKPQLDIKGNPMP-VVKEKEDNKKVIDLS 108
D PF+ + + I N+I + E Q DI GNPMP E + L+
Sbjct: 62 PYDEDNPFSNIEEKSIVLLDIFENYIVKDNDEGIQCDIDGNPMPSATNEDGEEPAYYSLT 121
Query: 109 LDAEFIYAS-FRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWE-DDGEG 166
D+++I+ F Q Y I+L++ + +L W +F+AL +L DDT ++ I++IRQ E G+G
Sbjct: 122 QDSDYIFCLLFLQDYNIDLIEVRGKLHWYKFRALFESLRDDTAIKSIMSIRQAELPSGKG 181
Query: 167 SKKYRDNMRKLKAKYSL 183
++K RD + KLK Y L
Sbjct: 182 TEKERDALIKLKNHYKL 198
>ref|NP_695159.1| hypothetical protein phig1ep25 [Lactobacillus phage phig1e]
pir||T13215 hypothetical protein R198 - Lactobacillus phage phi-gle
emb|CAA66744.1| Rorf198 [Bacteriophage phig1e]
Length = 198
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 94/169 (55%), Gaps = 13/169 (7%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDR----- 55
+ L +PL ++ GE + +DLSF+ VL + ++DDD +N++ K +L + +
Sbjct: 2 LSLVEPLGKTITIGGEEWTVDLSFDNVLRWYILLDDDAINDSRKIYLAFNAFVGEGMDVT 61
Query: 56 TDLPFTYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIY 115
D + ++ Y++ + + ++P +D+ G+P+P ++ DA+ I+
Sbjct: 62 ADQMVSVVSEISKYVQQT-VYGDHDDEPSVDLNGDPVP-------QERFFSYEKDADAIF 113
Query: 116 ASFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDG 164
ASF Y+I+L+++Q +L W +FKA+L+ L + T +RIIAIRQ G
Sbjct: 114 ASFMADYRIDLIEQQGKLRWEKFKAMLDGLSETTQFRRIIAIRQRSTSG 162
>ref|ZP_02080334.1| hypothetical protein CLOLEP_01787 [Clostridium leptum DSM 753]
gb|EDO61391.1| hypothetical protein CLOLEP_01787 [Clostridium leptum DSM 753]
Length = 201
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
M+L PL + +++ ++ SF VL + V D L ++EK CL
Sbjct: 1 MRLYSPLKKRVKYKLVPVRLNTSFRTVLKCYQVFSDALLTDSEKAEACL----------- 49
Query: 61 TYAVDLWVYIKTN-FIDAERPEKPQLD---IKGNPMPVVKEKEDNKKVIDLSLDAEFIYA 116
W+ +K+ F+ +P+K I + V +K +K D + DA +Y+
Sbjct: 50 ------WLLVKSKLFLKILKPDKKAALFNLIFKEFIDVSDKKNGGEKYFDFNQDAWAVYS 103
Query: 117 SFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQ--WEDDGEGSKKYRDNM 174
SF Q Y ++LL L W F AL N L DDT + +II+IR + + + R +
Sbjct: 104 SFMQCYHLDLLGADKNLHWWSFTALFNGLSDDTKIMQIISIRSRPLPKPTKYNAEERRQL 163
Query: 175 RKLKAKYSLDEREEE 189
KLK Y L+ EEE
Sbjct: 164 IKLKQLYKLNLSEEE 178
>ref|ZP_02078739.1| hypothetical protein CLOLEP_00176 [Clostridium leptum DSM 753]
gb|EDO63032.1| hypothetical protein CLOLEP_00176 [Clostridium leptum DSM 753]
Length = 201
Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 1 MKLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
M+L PL + +++ ++ SF VL + V D L + EK CL
Sbjct: 1 MRLYSPLKKRVKYKLVPVRLNTSFRTVLKCYQVFSDTLLTDFEKAEACL----------- 49
Query: 61 TYAVDLWVYIKTN-FIDAERPEKPQLD---IKGNPMPVVKEKEDNKKVIDLSLDAEFIYA 116
W+ +K+ F+ +P+K I + V +K +K D + DA +Y+
Sbjct: 50 ------WLLVKSKLFLKILKPDKKAALFNLIFKEFIDVSDKKAGGEKYFDFNQDAWAVYS 103
Query: 117 SFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQ--WEDDGEGSKKYRDNM 174
SF Q Y ++LL L W F AL N L DDT + +II+IR + + + R +
Sbjct: 104 SFMQCYHLDLLGADKNLHWWSFTALFNGLSDDTKIMQIISIRSRPLPKPTKYNAEERRQL 163
Query: 175 RKLKAKYSLDEREEE 189
KLK Y L+ EEE
Sbjct: 164 IKLKQLYKLNLSEEE 178
>gb|ABD63738.1| unknown [Lactococcus phage ul36.k1t1]
gb|ABD63791.1| unknown [Lactococcus phage ul36.t1]
gb|ABD63841.1| unknown [Lactococcus phage ul36.t1k1]
gb|ABD63891.1| unknown [Lactococcus phage phismq86]
Length = 235
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 31/191 (16%)
Query: 18 YPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDI--LLDRTDLPFT-YAVDLWVYIKTNF 74
Y + + F++VL +F++ D ++ +EK F+ +++ L ++P + + L +
Sbjct: 20 YEVVMDFSRVLRLFELYKQDDIDVSEKLFITIEMFFLAPINEIPEEDFQLILEGLTQKII 79
Query: 75 IDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQAYQINLLKEQNR-- 132
D R E + D+KGN + E+ KK D DA++I+ASF Q Y I+L+KE+ +
Sbjct: 80 GDNSREETVERDMKGNIL------EEEKKFYDFEEDADYIFASFMQDYGIDLIKEREKSN 133
Query: 133 --------------------LSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRD 172
+SW +F ALL L + + +R+I IRQ E ++K R
Sbjct: 134 YYWNKVQSGKMSLEKFRNHTMSWDKFNALLTGLSETSKFRRVIEIRQMEIPENATEKERK 193
Query: 173 NMRKLKAKYSL 183
++K K+ +L
Sbjct: 194 EIKKAKSAVAL 204
>ref|ZP_00241186.1| protein gp15 [Bacillus cereus G9241]
gb|EAL11198.1| protein gp15 [Bacillus cereus G9241]
Length = 221
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 37/206 (17%)
Query: 2 KLNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPFT 61
KL D + + + G ++LSF+ VL + ++ DD+ ++ K + L +L+
Sbjct: 3 KLTDRNRDIYHWAGVDIELNLSFDNVLKIMELFDDETISNRNKPNIALMMLI-------- 54
Query: 62 YAVDLWVYIKTNFIDAERPEKPQLDI---------------KGNPMPVVKEKEDNKK--- 103
VD + + ER K QL I K N M E E +++
Sbjct: 55 --VDHRILEQL-----ERRRKEQLIIDVFKDKLNIDLLSNKKKNEMTEAIENEGDEQPPE 107
Query: 104 --VIDLSLDAEFIYASFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWE 161
+++ +LDA+ I+ASF Y INL ++Q +L W EF AL N L + M+ I R E
Sbjct: 108 IPIVNFTLDADMIFASFLFDYNINLFEQQGKLQWSEFLALFNNLSEKAPMKIAIHYRTCE 167
Query: 162 --DDGEGSKKYRDNMRKLKAKYSLDE 185
E + R ++K+K +Y L E
Sbjct: 168 IPKKDEHNADERKRIKKMKERYELPE 193
>ref|ZP_02234306.1| hypothetical protein DORFOR_01174 [Dorea formicigenerans ATCC
27755]
gb|EDR47639.1| hypothetical protein DORFOR_01174 [Dorea formicigenerans ATCC
27755]
Length = 201
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 19/110 (17%)
Query: 95 VKEKEDNKK----------VIDLSLDAEFIYASFRQAYQINLLKEQNRLSWIEFKALLNA 144
V+E+E+ KK S DA +IY +F++ Y I+L + Q+ L W +FKAL ++
Sbjct: 79 VEEQEETKKRYVRKSTGEPAYSFSKDAAYIYTAFKEQYDIDLTEIQD-LHWWKFKALFDS 137
Query: 145 LPDDTVMQRIIAIRQWEDDG--EGSKKYRDNMRKL------KAKYSLDER 186
L ++T M++I+ R+ G + Y + M+KL K K +L++R
Sbjct: 138 LNEETQMKKIMYYRKVSTSGMDRDRRAYINEMKKLYSLSKDKKKMTLEQR 187
>ref|ZP_02729364.1| hypothetical protein CdifQCD_16750 [Clostridium difficile
QCD-37x79]
ref|ZP_02747471.1| hypothetical protein CdifQCD-6_15828 [Clostridium difficile
QCD-63q42]
Length = 201
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 3 LNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPFTY 62
L D L ES E G+ Y I+ F + +I D+ +++ EK L + T
Sbjct: 4 LVDILPESVEIDGKEYKINTDFRISILFEMLIQDNSISDEEKGENALLLYYPVIPTNTTM 63
Query: 63 AVD--LWVYI---KTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYAS 117
A++ +W Y K N +D +G ++ D E+IY++
Sbjct: 64 AIEKIIWFYSCGKKENNVDD--------GCRGGA------GSSKSQIYSYDYDDEYIYSA 109
Query: 118 FRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKL 177
F Y I+L ++ +L W +FKAL +L +DT + +I+ R + G+ K +D RK+
Sbjct: 110 FLGQYGIDL-QDIEKLHWWKFKALFKSLKEDTEIVKIMGYRAMDVSGDMPKAQKDFYRKM 168
Query: 178 KAKYSL 183
K +++
Sbjct: 169 KKIHAI 174
>ref|ZP_02418143.1| hypothetical protein ANACAC_00711 [Anaerostipes caccae DSM 14662]
gb|EDR98660.1| hypothetical protein ANACAC_00711 [Anaerostipes caccae DSM 14662]
Length = 221
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 103 KVIDLSLDAEFIYASFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWED 162
++ + DA++IYA+F + Y I+L L W +F A+ L +D ++ +++ R +
Sbjct: 115 QIYSFTHDADYIYAAFMEQYGIDL--NAVELHWWKFSAMFAGLKEDCLISKVMGYRAADT 172
Query: 163 DGEGSKKYRDNMRKLKAKYSLDEREEEDD 191
G K+ + +K+K Y L E E+D
Sbjct: 173 AGM-DKEQKKFYKKMKEIYKLPENVSEED 200
>ref|ZP_01994790.1| hypothetical protein DORLON_00779 [Dorea longicatena DSM 13814]
gb|EDM64098.1| hypothetical protein DORLON_00779 [Dorea longicatena DSM 13814]
Length = 189
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 20/144 (13%)
Query: 16 EIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRT--DL-PFTYAVDLWVYIKT 72
E Y I+ F + + +++D+ + KC L L +D DL YA+ ++ +KT
Sbjct: 17 EAYQIETDFREWIRFAKLVEDEDIPWQIKCRLLLRWYIDGIPDDLETAVYALGDFLAMKT 76
Query: 73 NFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQAYQINLLKEQNR 132
+AE E I G+ K++ DAE IY++FR+ Y IN L+ +
Sbjct: 77 E--NAEEDE----SITGSA---------PKQLYSFEQDAECIYSAFREVYGIN-LQTISY 120
Query: 133 LSWIEFKALLNALPDDT-VMQRII 155
+ W EF+ L LP+ T + QRI+
Sbjct: 121 MHWWEFQTLFAGLPEKTEIKQRIM 144
>ref|ZP_01968514.1| hypothetical protein RUMTOR_02091 [Ruminococcus torques ATCC 27756]
gb|EDK23789.1| hypothetical protein RUMTOR_02091 [Ruminococcus torques ATCC 27756]
Length = 201
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 100 DNKKVIDLSLDAEFIYASFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQ 159
++K+ D DA+ IYA F Q Y I+L +++ + W +F LL L + T +Q+++ R
Sbjct: 91 NDKQPFDFEEDADLIYAGFMQQYGIDL--QESDMHWWKFMILLENLGNGTRLQKVMEYRT 148
Query: 160 WEDDGEG-SKKYRDNMRKLKAKYSLDER 186
+ + SK ++ R ++ Y L+++
Sbjct: 149 IDTGNKNLSKTEQEFYRAMQRYYGLEQK 176
>ref|ZP_02233885.1| hypothetical protein DORFOR_00737 [Dorea formicigenerans ATCC
27755]
gb|EDR48080.1| hypothetical protein DORFOR_00737 [Dorea formicigenerans ATCC
27755]
Length = 187
Score = 41.2 bits (95), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 15 GEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPFTYAVDLWVYIKTNF 74
G+ Y ++ F + + +++D+ + KC L L D A++ T
Sbjct: 16 GQDYEVETDFREWIRFTKLVEDEDVPWQIKCRLLLQWYTDEIPDDLEEAIEALGDFLTMR 75
Query: 75 IDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQAYQINLLKEQNRLS 134
D E ++P L K+V D +IY++FR+AY I+L + +
Sbjct: 76 QDGEESDEPMLP--------------PKQVYSFDEDMVWIYSAFREAYGIDL-QSVPYMH 120
Query: 135 WIEFKALLNALPDDT-VMQRII 155
W EF+ L LPD+T + QRI+
Sbjct: 121 WWEFQTLFIGLPDNTEIKQRIL 142
>ref|ZP_02616054.1| site-specific recombinase [Clostridium botulinum Bf]
gb|EDT87240.1| site-specific recombinase [Clostridium botulinum Bf]
Length = 197
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 33 VIDDDFLNEAEKCFLCLDILLDRTDLPFTYAVD--LWVYIKTNFIDAERPEKPQLDIKGN 90
++ D+ L+E +K L + AVD LW Y R K + KG
Sbjct: 34 LMQDNELSEEDKIIQALQLYYPVIPPNINLAVDKMLWFY---------RCGKDMIPSKGT 84
Query: 91 PMPVVKEKEDNKKVIDLSLDAEFIYASFRQAYQINLLKEQNRLSWIEFKALLNALPDDTV 150
K + ++ + D ++IY++F Y+I+L ++ L W +FKA+ AL +D
Sbjct: 85 G------KGKSTQIYNFEYDDDYIYSAFLDQYRIDL-QDIEYLHWWKFKAMFKALKEDNE 137
Query: 151 MQRIIAIRQWEDDGEGSKKYRDNMRKLKAKYSLDEREEEDD 191
+ +I+ R + K+ + RK++ Y + ++E D
Sbjct: 138 IVKIMGYRSMDLSKIKDKEEKSYYRKMQELYKIPIAKDEKD 178
>ref|ZP_02077421.1| hypothetical protein EUBDOL_01216 [Eubacterium dolichum DSM 3991]
gb|EDP11296.1| hypothetical protein EUBDOL_01216 [Eubacterium dolichum DSM 3991]
Length = 184
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 101 NKKVIDLSLDAEFIYASFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQW 160
++ V + D ++I F + Y I+LL + W +F ALLNAL D +++ I R
Sbjct: 90 SRYVFSFTYDQDYIIGGFMECYGIDLLS--TSMHWWKFNALLNALNDSCELKKRIYYRSI 147
Query: 161 EDDGEGSKKYRDNMRKLKAKYSLDEREEEDD 191
KK R ++K++ + ++ E D+
Sbjct: 148 CLSEIKDKKERRQIQKIQRQIAIPAAELSDE 178
>ref|YP_001781730.1| putative protein gp15 [Clostridium botulinum B1 str. Okra]
gb|ACA44747.1| putative protein gp15 [Clostridium botulinum B1 str. Okra]
Length = 197
Score = 38.5 bits (88), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 33 VIDDDFLNEAEKCFLCLDILLDRTDLPFTYAVD--LWVYIKTNFIDAERPEKPQLDIKGN 90
++ D+ ++E K L + AVD LW Y R K L KG
Sbjct: 34 LMQDNSISEENKIIQALQLYYPVIPPNINLAVDKMLWFY---------RCGKDILPSKGT 84
Query: 91 PMPVVKEKEDNKKVIDLSLDAEFIYASFRQAYQINLLKEQNRLSWIEFKALLNALPDDTV 150
K + ++ + D ++IY++F Y+I+L ++ L W +FKA+ AL +D
Sbjct: 85 G------KGKSTQIYSFNFDDDYIYSAFLDQYRIDL-QDIEYLHWWKFKAMFKALKEDNE 137
Query: 151 MQRIIAIRQWEDDGEGSKKYRDNMRKLKAKYSLDEREEEDD 191
+ +I+ R + K+ + RK++ Y + ++E D
Sbjct: 138 IVKIMGYRSMDLSKIKDKEEKKYYRKMQELYKIPIAKDEKD 178
>ref|YP_001787263.1| putative protein gp15 [Clostridium botulinum A3 str. Loch Maree]
gb|ACA54450.1| putative protein gp15 [Clostridium botulinum A3 str. Loch Maree]
Length = 197
Score = 38.5 bits (88), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 3 LNDPLVESFEFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPFTY 62
L D + + E G+ Y I+ F + ++ D+ ++E +K L +
Sbjct: 4 LIDLVPNTIEIEGKNYNINSDFRTSILFELLMQDNSISEEDKLIQALQLYYPVIPPNINL 63
Query: 63 AVD--LWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
AVD LW Y R K KG K + ++ + D ++IY++F
Sbjct: 64 AVDKMLWFY---------RCGKDITPSKGTG------KGKSTQIYLFNFDDDYIYSAFLD 108
Query: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
Y I+L ++ L W +FKA+ AL +D + +I+ R + K+ ++ R+++
Sbjct: 109 QYGIDL-QDIEYLHWWKFKAMFKALKEDNEIVKIMGYRSMDLSKIKDKEEKNYYRRMQEL 167
Query: 181 YSLDEREEEDD 191
Y + ++E D
Sbjct: 168 YKIPIAKDEKD 178
>ref|ZP_02637354.1| hypothetical protein AC1_1108 [Clostridium perfringens B str. ATCC
3626]
gb|EDT22499.1| hypothetical protein AC1_1108 [Clostridium perfringens B str. ATCC
3626]
Length = 120
Score = 38.1 bits (87), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 101 NKKVIDLSLDAEFIYASFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQW 160
N + DL D E I ASF Y I L E + ++W EF LL+ + T + +I++IR
Sbjct: 13 NNQWYDLFEDWELIEASFTAQYGIRLRNESD-MTWDEFCTLLSGIMSKTPLGQIVSIRSE 71
Query: 161 EDDG 164
ED+
Sbjct: 72 EDEN 75
>ref|ZP_02640265.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
gb|EDT26083.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
Length = 203
Score = 37.7 bits (86), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 104 VIDLSLDAEFIYASFRQAYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDD 163
+ D E+IY++F Y+++L ++ L W +FKA+ L + + II R +
Sbjct: 98 IYSFEYDDEYIYSAFLSQYKVDL-QDIEYLHWWKFKAMFKGLSEGNKIMEIIKYRSIDLS 156
Query: 164 GEGSKKYRDNMRKLKAKYSLDEREEEDDG 192
KK R+ + +K + L +R +D+
Sbjct: 157 KIEDKKEREFYKNMKNTFKLPDRINKDEN 185
>ref|ZP_02432161.1| hypothetical protein CLOSCI_02406 [Clostridium scindens ATCC 35704]
gb|EDS06457.1| hypothetical protein CLOSCI_02406 [Clostridium scindens ATCC 35704]
Length = 188
Score = 37.7 bits (86), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 5 DPLVESF----EFRGEIYPIDLSFNKVLDVFDVIDDDFLNEAEKCFLCLDILLDRTDLPF 60
+PL E F E RG+ I F + + + +++DD+ + +K L L +D +
Sbjct: 2 NPLYERFPDYVEVRGKRCRIVTDFREWIKLVELLDDEGVPGRKKAELLLQWYIDCPEDTE 61
Query: 61 TYAVDLWVYIKTNFIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQ 120
L ++ N + E P K +++ V + DA I+A+F +
Sbjct: 62 EAIYKLGEFLAGNVLYPE------------PKKTDSSKSESEPVFSYTEDAGCIFAAFLE 109
Query: 121 AYQINLLKEQNRLSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAK 180
Y I+L + + + W +F L LP+ +++ + R+ + + K+ R ++++K +
Sbjct: 110 YYGIDLERVRY-MHWWKFLILFEGLPEQAEIKQRMMYRKADLNSIKDKEERKRVKEIKKR 168
Query: 181 YSLDERE 187
+L ++
Sbjct: 169 VALHRKQ 175
>ref|ZP_02640185.1| putative protein gp15 [Clostridium perfringens CPE str. F4969]
gb|EDT26136.1| putative protein gp15 [Clostridium perfringens CPE str. F4969]
Length = 204
Score = 37.4 bits (85), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 74 FIDAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSLDAEFIYASFRQAYQINLLKEQNRL 133
F R EK +++ K N KEK + D E+IY++F Y+++L ++ + L
Sbjct: 73 FYGGGREEK-EVNSKKNNSSSRKEK----NIYSFEYDDEYIYSAFLSQYKVDL-QDIDYL 126
Query: 134 SWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAKYSL 183
W +FKA+ L ++ + +I+ R + + K+ R ++++ Y+L
Sbjct: 127 HWWKFKAMFKGLTEENTIVKIMKYRSIDLNSIKDKEERKFYKEMQELYAL 176
>ref|NP_001085087.1| hypothetical protein LOC432158 [Xenopus laevis]
gb|AAH72228.1| MGC81471 protein [Xenopus laevis]
Length = 616
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 76 DAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLSL---DAEFIYASFRQAYQINLLKEQNR 132
+AE+ + QL I+ VK E+ ++ LS D+ F+ RQ L+EQ R
Sbjct: 72 EAEKANEEQLKIENQLRNRVKRLENEIEMAQLSTGSRDSRFLREEIRQ------LEEQLR 125
Query: 133 LSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDN 173
S E K + N L + + +A+R E D E SK R+N
Sbjct: 126 QSERELKDMANELEREKQVNEQLALRNEETDNENSKLRREN 166
>ref|YP_001285891.1| hypothetical protein LPLLH_ORF75 [Lactobacillus phage LL-H]
gb|AAC00543.1| hypothetical protein [Lactobacillus phage LL-H]
Length = 75
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 133 LSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDNMRKLKAKYSLDEREEE 189
+SW +FKALL+ L +++ +RI+ IR+ D E K + M K YSL + E+
Sbjct: 1 MSWFKFKALLDGLDPESIFERIVRIRK-ADLSEYKGKQLNEMVDCKEYYSLAQTPED 56
>ref|NP_001116498.1| centrosomal protein 290kDa [Xenopus tropicalis]
gb|AAI58163.1| Unknown (protein for MGC:135494) [Xenopus tropicalis]
Length = 396
Score = 34.3 bits (77), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 76 DAERPEKPQLDIKGNPMPVVKEKEDNKKVIDLS---LDAEFIYASFRQAYQINLLKEQNR 132
+AE+ + QL + VK E+ +V LS D+ F+ RQ L+EQ R
Sbjct: 72 EAEKANEEQLKTENQLRNRVKRLENEIEVAQLSSGSRDSRFLREEIRQ------LEEQLR 125
Query: 133 LSWIEFKALLNALPDDTVMQRIIAIRQWEDDGEGSKKYRDN 173
S E K + N L + + +A+R E D E SK R+N
Sbjct: 126 QSERECKDMANELEREKQVNEQLALRNEETDNENSKLRREN 166
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 10, 2008 4:54 AM
Number of letters in database: 2,222,278,849
Number of sequences in database: 6,515,104
Lambda K H
0.319 0.140 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6515104
Number of Hits to DB: 890,110,226
Number of extensions: 37780034
Number of successful extensions: 102777
Number of sequences better than 10.0: 72
Number of HSP's gapped: 103791
Number of HSP's successfully gapped: 72
Length of query: 193
Length of database: 2,222,278,849
Length adjustment: 126
Effective length of query: 67
Effective length of database: 1,401,375,745
Effective search space: 93892174915
Effective search space used: 93892174915
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)