BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SSA_0682
(277 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|125717536|ref|YP_001034669.1| Conserved uncharacterized ... 502 e-141
gi|157075638|gb|ABV10321.1| DegV family protein [Streptococ... 413 e-114
gi|148985085|ref|ZP_01818328.1| bifunctional riboflavin kin... 412 e-113
gi|149003769|ref|ZP_01828601.1| DegV family protein [Strept... 412 e-113
gi|15903063|ref|NP_358613.1| hypothetical protein spr1019 [... 410 e-113
gi|148989156|ref|ZP_01820546.1| degV family protein [Strept... 409 e-113
gi|15900979|ref|NP_345583.1| degV family protein [Streptoco... 408 e-112
gi|81096214|ref|ZP_00874562.1| DegV [Streptococcus suis 89/... 390 e-107
gi|146319304|ref|YP_001199016.1| hypothetical protein SSU05... 389 e-106
gi|24379064|ref|NP_721019.1| hypothetical protein SMU.586 [... 367 e-100
gi|25010617|ref|NP_735012.1| hypothetical protein gbs0548 [... 362 1e-98
gi|22536681|ref|NP_687532.1| DegV family protein [Streptoco... 360 6e-98
gi|55821219|ref|YP_139661.1| conserved hypothetical protein... 358 2e-97
gi|116627945|ref|YP_820564.1| hypothetical protein STER_117... 355 2e-96
gi|50914592|ref|YP_060564.1| DegV family protein [Streptoco... 328 2e-88
gi|15675397|ref|NP_269571.1| hypothetical protein SPy_1493 ... 328 3e-88
gi|21910685|ref|NP_664953.1| hypothetical protein SpyM3_114... 326 7e-88
gi|116511324|ref|YP_808540.1| hypothetical protein LACR_052... 315 2e-84
gi|125623359|ref|YP_001031842.1| hypothetical protein llmg_... 315 2e-84
gi|30179870|sp|Q9CI68|YEJH_LACLA UPF0230 protein yejH 315 2e-84
gi|15672480|ref|NP_266654.1| hypothetical protein L98583 [L... 315 2e-84
gi|93279913|pdb|2G7Z|A Chain A, Conserved Hypothetical Prot... 303 8e-81
gi|56807450|ref|ZP_00365405.1| COG1307: Uncharacterized pro... 299 1e-79
gi|29376238|ref|NP_815392.1| DegV family protein, putative ... 288 3e-76
gi|69246748|ref|ZP_00604096.1| DegV [Enterococcus faecium D... 277 6e-73
gi|77412378|ref|ZP_00788688.1| DegV family protein [Strepto... 269 1e-70
gi|76799718|ref|ZP_00781814.1| DegV family protein [Strepto... 235 2e-60
gi|116494876|ref|YP_806610.1| hypothetical protein LSEI_139... 234 4e-60
gi|116492829|ref|YP_804564.1| hypothetical protein PEPE_106... 231 5e-59
gi|81428610|ref|YP_395610.1| Hypothetical protein, DegV fam... 227 7e-58
gi|28378523|ref|NP_785415.1| DegV family protein [Lactobaci... 215 2e-54
gi|89100593|ref|ZP_01173452.1| degV family protein [Bacillu... 214 6e-54
gi|116333434|ref|YP_794961.1| hypothetical protein LVIS_078... 213 1e-53
gi|126650229|ref|ZP_01722457.1| DegV family protein [Bacill... 207 7e-52
gi|92089911|ref|ZP_01274832.1| DegV [Lactobacillus reuteri ... 206 1e-51
gi|133930473|gb|ABO43808.1| DegV [Lactobacillus reuteri] 206 1e-51
gi|116629565|ref|YP_814737.1| hypothetical protein LGAS_091... 206 1e-51
gi|148544003|ref|YP_001271373.1| degV family protein [Lacto... 204 5e-51
gi|58337272|ref|YP_193857.1| putative family protein [Lacto... 202 2e-50
gi|30020334|ref|NP_831965.1| DegV family protein [Bacillus ... 199 2e-49
gi|49477572|ref|YP_036360.1| DegV family protein [Bacillus ... 199 2e-49
gi|118477677|ref|YP_894828.1| DegV family protein [Bacillus... 199 2e-49
gi|56420306|ref|YP_147624.1| hypothetical protein GK1771 [G... 199 2e-49
gi|42781340|ref|NP_978587.1| degV family protein [Bacillus ... 199 2e-49
gi|149179674|ref|ZP_01858179.1| degV family protein [Bacill... 197 7e-49
gi|30262260|ref|NP_844637.1| degV family protein [Bacillus ... 195 2e-48
gi|89208501|ref|ZP_01187004.1| DegV [Bacillus weihenstephan... 194 4e-48
gi|152975435|ref|YP_001374952.1| degV family protein [Bacil... 194 5e-48
gi|28379630|ref|NP_786522.1| DegV family protein [Lactobaci... 191 4e-47
gi|42519028|ref|NP_964958.1| hypothetical protein LJ1102 [L... 190 7e-47
gi|104774165|ref|YP_619145.1| hypothetical protein Ldb1278 ... 189 1e-46
gi|52080684|ref|YP_079475.1| DegVA [Bacillus licheniformis ... 189 1e-46
gi|81428575|ref|YP_395575.1| Hypothetical protein, DegV fam... 188 3e-46
gi|75764394|ref|ZP_00743906.1| DegV family protein [Bacillu... 188 3e-46
gi|56965775|ref|YP_177509.1| hypothetical protein ABC4017 [... 187 5e-46
gi|116491044|ref|YP_810588.1| hypothetical protein OEOE_101... 181 4e-44
gi|116617869|ref|YP_818240.1| hypothetical protein LEUM_075... 181 6e-44
gi|118586881|ref|ZP_01544315.1| hypothetical protein, DegV ... 180 7e-44
gi|16803903|ref|NP_465388.1| hypothetical protein lmo1863 [... 178 3e-43
gi|47096905|ref|ZP_00234483.1| DegV family protein [Listeri... 178 4e-43
gi|47093245|ref|ZP_00231017.1| DegV family protein [Listeri... 177 6e-43
gi|116873298|ref|YP_850079.1| DegV family protein [Listeria... 177 6e-43
gi|46908095|ref|YP_014484.1| DegV family protein [Listeria ... 177 8e-43
gi|16801043|ref|NP_471311.1| hypothetical protein lin1977 [... 176 1e-42
gi|153196370|ref|ZP_01940740.1| hypothetical protein LMRG_0... 176 1e-42
gi|118587376|ref|ZP_01544802.1| hypothetical protein, DegV ... 174 5e-42
gi|116491200|ref|YP_810744.1| hypothetical protein OEOE_118... 173 1e-41
gi|90961152|ref|YP_535068.1| DegV family protein [Lactobaci... 170 7e-41
gi|153179928|ref|ZP_01933067.1| hypothetical protein LMMG_0... 166 2e-39
gi|94958287|gb|ABF47275.1| DegV family protein-like protein... 150 7e-35
gi|73662623|ref|YP_301404.1| hypothetical protein SSP1314 [... 149 2e-34
gi|27468036|ref|NP_764673.1| hypothetical protein SE1118 [S... 149 2e-34
gi|82751016|ref|YP_416757.1| hypothetical protein SAB1280c ... 147 5e-34
gi|15924415|ref|NP_371949.1| hypothetical protein SAV1425 [... 147 6e-34
gi|21283044|ref|NP_646132.1| hypothetical protein MW1315 [S... 147 7e-34
gi|49483616|ref|YP_040840.1| hypothetical protein SAR1438 [... 146 1e-33
gi|106893512|ref|ZP_01360637.1| DegV [Clostridium sp. OhILA... 140 7e-32
gi|70726482|ref|YP_253396.1| hypothetical protein SH1481 [S... 135 2e-30
gi|30023231|ref|NP_834862.1| DegV family protein [Bacillus ... 134 8e-30
gi|75759036|ref|ZP_00739144.1| DegV family protein [Bacillu... 134 8e-30
gi|16801719|ref|NP_471987.1| hypothetical protein lin2658 [... 133 9e-30
gi|15616189|ref|NP_244494.1| hypothetical protein BH3627 [B... 133 1e-29
gi|116333471|ref|YP_794998.1| hypothetical protein LVIS_082... 133 1e-29
gi|671632|emb|CAA78911.1| unknown [Staphylococcus aureus] 131 4e-29
gi|89205061|ref|ZP_01183634.1| DegV [Bacillus weihenstephan... 131 4e-29
gi|30265221|ref|NP_847598.1| degV family protein [Bacillus ... 131 5e-29
gi|42784349|ref|NP_981596.1| degV family protein [Bacillus ... 131 5e-29
gi|126652485|ref|ZP_01724657.1| degV family protein [Bacill... 131 5e-29
gi|149182538|ref|ZP_01861010.1| degV family protein [Bacill... 131 6e-29
gi|28378468|ref|NP_785360.1| DegV family protein [Lactobaci... 130 6e-29
gi|56964073|ref|YP_175804.1| hypothetical protein ABC2308 [... 130 6e-29
gi|52140370|ref|YP_086460.1| degV family protein [Bacillus ... 130 1e-28
gi|47567409|ref|ZP_00238122.1| DegV family protein [Bacillu... 130 1e-28
gi|89211644|ref|ZP_01189998.1| DegV [Halothermothrix orenii... 130 1e-28
gi|90961852|ref|YP_535768.1| DegV family protein [Lactobaci... 129 1e-28
gi|46908686|ref|YP_015075.1| DegV family protein [Listeria ... 129 2e-28
gi|56421684|ref|YP_149002.1| hypothetical protein GK3149 [G... 129 2e-28
gi|113941826|ref|ZP_01427605.1| degV family protein [Herpet... 129 2e-28
gi|57233961|ref|YP_181976.1| degV family protein [Dehalococ... 129 3e-28
gi|148322369|gb|EDK87619.1| possible DegV family kinase [Fu... 128 3e-28
gi|114566579|ref|YP_753733.1| hypothetical protein Swol_105... 128 4e-28
gi|150390888|ref|YP_001320937.1| degV family protein [Alkal... 128 4e-28
gi|116492711|ref|YP_804446.1| hypothetical protein PEPE_094... 128 4e-28
gi|57233960|ref|YP_181977.1| degV family protein [Dehalococ... 127 5e-28
gi|152977405|ref|YP_001376922.1| degV family protein [Bacil... 127 6e-28
gi|23099973|ref|NP_693439.1| hypothetical protein OB2518 [O... 127 6e-28
gi|16804552|ref|NP_466037.1| hypothetical protein lmo2514 [... 127 8e-28
gi|73748949|ref|YP_308188.1| degV family protein [Dehalococ... 127 1e-27
gi|149179657|ref|ZP_01858162.1| DegV family protein [Bacill... 126 1e-27
gi|156740620|ref|YP_001430749.1| degV family protein [Rosei... 126 1e-27
gi|116873878|ref|YP_850659.1| DegV family protein [Listeria... 126 2e-27
gi|89210425|ref|ZP_01188815.1| DegV [Halothermothrix orenii... 125 2e-27
gi|147669716|ref|YP_001214534.1| degV family protein [Dehal... 125 3e-27
gi|92089922|ref|ZP_01274842.1| DegV [Lactobacillus reuteri ... 125 4e-27
gi|148544162|ref|YP_001271532.1| degV family protein [Lacto... 124 5e-27
gi|73748948|ref|YP_308187.1| degV family protein [Dehalococ... 124 6e-27
gi|56964849|ref|YP_176580.1| hypothetical protein ABC3085 [... 124 6e-27
gi|147669715|ref|YP_001214533.1| degV family protein [Dehal... 124 7e-27
gi|19705232|ref|NP_602727.1| DEGV protein [Fusobacterium nu... 123 1e-26
gi|148657622|ref|YP_001277827.1| degV family protein [Rosei... 122 2e-26
gi|69244169|ref|ZP_00602705.1| DegV [Enterococcus faecium D... 122 2e-26
gi|34762119|ref|ZP_00143127.1| Predicted kinase related to ... 122 2e-26
gi|117927980|ref|YP_872531.1| degV family protein [Acidothe... 122 2e-26
gi|118443350|ref|YP_877483.1| degV family protein , putativ... 122 3e-26
gi|28210124|ref|NP_781068.1| degV protein [Clostridium teta... 121 4e-26
gi|126700228|ref|YP_001089125.1| hypothetical protein CD261... 121 4e-26
gi|138896711|ref|YP_001127164.1| DegV family protein [Geoba... 120 6e-26
gi|47565603|ref|ZP_00236643.1| DegV family protein [Bacillu... 120 7e-26
gi|124521419|ref|ZP_01696353.1| degV family protein [Bacill... 120 8e-26
gi|153955992|ref|YP_001396757.1| hypothetical protein CKL_3... 120 9e-26
gi|147669044|ref|YP_001213862.1| degV family protein [Dehal... 120 1e-25
gi|106895387|ref|ZP_01362483.1| DegV [Clostridium sp. OhILA... 120 1e-25
gi|150015483|ref|YP_001307737.1| degV family protein [Clost... 120 1e-25
gi|15893989|ref|NP_347338.1| Uncharacterised protein, DegV ... 118 4e-25
gi|57235089|ref|YP_180856.1| degV family protein [Dehalococ... 118 4e-25
gi|73748060|ref|YP_307299.1| degV family protein [Dehalococ... 118 5e-25
gi|32441872|gb|AAP82005.1| unknown [Staphylococcus sp. MRCN... 118 5e-25
gi|73748263|ref|YP_307502.1| degV family protein [Dehalococ... 117 8e-25
gi|29376133|ref|NP_815287.1| DegV family protein [Enterococ... 117 1e-24
gi|23098643|ref|NP_692109.1| hypothetical protein OB1188 [O... 116 1e-24
gi|154497098|ref|ZP_02035794.1| hypothetical protein BACCAP... 116 2e-24
gi|147669717|ref|YP_001214535.1| degV family protein [Dehal... 116 2e-24
gi|46198893|ref|YP_004560.1| degV protein [Thermus thermoph... 116 2e-24
gi|109644733|ref|ZP_01368653.1| degV family protein [Desulf... 116 2e-24
gi|57234792|ref|YP_181166.1| degV family protein [Dehalococ... 115 2e-24
gi|89894401|ref|YP_517888.1| hypothetical protein DSY1655 [... 115 2e-24
gi|51892587|ref|YP_075278.1| hypothetical protein STH1449 [... 115 3e-24
gi|89098396|ref|ZP_01171280.1| DegV family protein [Bacillu... 115 3e-24
gi|55980920|ref|YP_144217.1| DegV family protein [Thermus t... 115 3e-24
gi|116494924|ref|YP_806658.1| hypothetical protein LSEI_143... 114 5e-24
gi|150261199|pdb|2DT8|A Chain A, Fatty Acid Binding Of A De... 114 5e-24
gi|116494715|ref|YP_806449.1| hypothetical protein LSEI_122... 114 7e-24
gi|29832033|ref|NP_826667.1| hypothetical protein SAV5490 [... 114 8e-24
gi|73748950|ref|YP_308189.1| degV family protein [Dehalococ... 114 8e-24
gi|51894296|ref|YP_076987.1| hypothetical protein STH3161 [... 113 1e-23
gi|94985393|ref|YP_604757.1| degV family protein [Deinococc... 113 1e-23
gi|84495879|ref|ZP_00994733.1| hypothetical protein JNB_001... 113 1e-23
gi|153814483|ref|ZP_01967151.1| hypothetical protein RUMTOR... 113 1e-23
gi|57234215|ref|YP_181748.1| degV family protein [Dehalococ... 112 2e-23
gi|145621688|ref|ZP_01777654.1| degV family protein [Petrot... 112 2e-23
gi|73748951|ref|YP_308190.1| degV family protein [Dehalococ... 112 2e-23
gi|147669718|ref|YP_001214536.1| degV family protein [Dehal... 112 2e-23
gi|57233958|ref|YP_181979.1| degV family protein [Dehalococ... 112 2e-23
gi|89894347|ref|YP_517834.1| hypothetical protein DSY1601 [... 112 3e-23
gi|114845315|ref|ZP_01455727.1| degV family protein [Thermo... 112 3e-23
gi|146296319|ref|YP_001180090.1| degV family protein [Caldi... 111 4e-23
gi|145955990|ref|ZP_01804990.1| hypothetical protein CdifQ_... 111 4e-23
gi|89095965|ref|ZP_01168859.1| degV family protein [Bacillu... 111 5e-23
gi|76797353|ref|ZP_00779679.1| DegV [Thermoanaerobacter eth... 111 5e-23
gi|20807934|ref|NP_623105.1| hypothetical protein TTE1491 [... 110 7e-23
gi|126698146|ref|YP_001087043.1| hypothetical protein CD056... 110 9e-23
gi|78042789|ref|YP_361215.1| degV family protein [Carboxydo... 110 9e-23
gi|21221028|ref|NP_626807.1| hypothetical protein SCO2569 [... 110 1e-22
gi|154483282|ref|ZP_02025730.1| hypothetical protein EUBVEN... 110 1e-22
gi|51891662|ref|YP_074353.1| hypothetical protein STH524 [S... 109 2e-22
gi|110801624|ref|YP_697625.1| degV family protein [Clostrid... 109 2e-22
gi|126540403|emb|CAL44590.1| YviA protein [Bacillus megater... 109 2e-22
gi|152975711|ref|YP_001375228.1| degV family protein [Bacil... 109 2e-22
gi|89101038|ref|ZP_01173879.1| degV family protein [Bacillu... 109 2e-22
gi|18309286|ref|NP_561220.1| DegV-like protein [Clostridium... 108 2e-22
gi|149180963|ref|ZP_01859464.1| hypothetical protein BSG1_1... 108 3e-22
gi|110798772|ref|YP_694761.1| degV family protein [Clostrid... 108 4e-22
gi|57233959|ref|YP_181978.1| degV family protein [Dehalococ... 108 4e-22
gi|81428572|ref|YP_395572.1| Hypothetical protein, DegV fam... 108 5e-22
gi|154502702|ref|ZP_02039762.1| hypothetical protein RUMGNA... 107 6e-22
gi|68054134|ref|ZP_00538298.1| DegV [Exiguobacterium sibiri... 107 6e-22
gi|154484842|ref|ZP_02027290.1| hypothetical protein EUBVEN... 107 7e-22
gi|153811661|ref|ZP_01964329.1| hypothetical protein RUMOBE... 106 2e-21
gi|52082082|ref|YP_080873.1| DegV [Bacillus licheniformis A... 106 2e-21
gi|147669557|ref|YP_001214375.1| degV family protein [Dehal... 105 2e-21
gi|120602273|ref|YP_966673.1| degV family protein [Desulfov... 105 3e-21
gi|118444302|ref|YP_876999.1| degV family protein [Clostrid... 105 3e-21
gi|73748795|ref|YP_308034.1| degV family protein [Dehalococ... 105 4e-21
gi|886711|emb|CAA88270.1| unknown [Staphylococcus epidermidis] 104 5e-21
gi|46580351|ref|YP_011159.1| DAK2 domain/degV family protei... 104 5e-21
gi|154482572|ref|ZP_02025020.1| hypothetical protein EUBVEN... 104 6e-21
gi|116493511|ref|YP_805246.1| hypothetical protein PEPE_178... 104 6e-21
gi|52142640|ref|YP_084190.1| DegV family protein [Bacillus ... 103 8e-21
gi|116629651|ref|YP_814823.1| hypothetical protein LGAS_100... 103 1e-20
gi|30020988|ref|NP_832619.1| DegV family protein [Bacillus ... 103 1e-20
gi|139439034|ref|ZP_01772486.1| Hypothetical protein COLAER... 103 1e-20
gi|113941827|ref|ZP_01427606.1| degV family protein [Herpet... 103 1e-20
gi|30262836|ref|NP_845213.1| degV family protein [Bacillus ... 103 2e-20
gi|154687663|ref|YP_001422824.1| YviA [Bacillus amyloliquef... 103 2e-20
gi|89207303|ref|ZP_01185847.1| DegV [Bacillus weihenstephan... 102 2e-20
gi|47567694|ref|ZP_00238404.1| DegV family protein [Bacillu... 102 2e-20
gi|16080601|ref|NP_391428.1| hypothetical protein BSU35480 ... 102 2e-20
gi|15806984|ref|NP_295709.1| degV protein [Deinococcus radi... 102 3e-20
gi|42519106|ref|NP_965036.1| hypothetical protein LJ1180 [L... 102 3e-20
gi|116333002|ref|YP_794529.1| hypothetical protein LVIS_033... 102 3e-20
gi|150391339|ref|YP_001321388.1| degV family protein [Alkal... 102 3e-20
gi|150391192|ref|YP_001321241.1| degV family protein [Alkal... 102 3e-20
gi|134301147|ref|YP_001114643.1| degV family protein [Desul... 102 3e-20
gi|68055665|ref|ZP_00539808.1| DegV [Exiguobacterium sibiri... 102 3e-20
gi|118478218|ref|YP_895369.1| DegV family protein [Bacillus... 101 4e-20
gi|89098058|ref|ZP_01170944.1| YitS [Bacillus sp. NRRL B-14... 101 4e-20
gi|52079606|ref|YP_078397.1| conserved protein YitS [Bacill... 101 5e-20
gi|81427644|ref|YP_394641.1| Hypothetical protein, DegV fam... 101 5e-20
gi|42781962|ref|NP_979209.1| degV family protein [Bacillus ... 101 6e-20
gi|148657623|ref|YP_001277828.1| degV family protein [Rosei... 100 8e-20
gi|106880137|emb|CAJ70740.1| degV [Bacillus licheniformis] 100 9e-20
gi|154685542|ref|YP_001420703.1| YitS [Bacillus amyloliquef... 100 1e-19
gi|124520708|ref|ZP_01695825.1| degV family protein [Bacill... 100 1e-19
gi|78356687|ref|YP_388136.1| degV family protein [Desulfovi... 100 1e-19
gi|29374675|ref|NP_813827.1| DegV family protein [Enterococ... 100 1e-19
gi|146321748|ref|YP_001201459.1| hypothetical protein SSU98... 100 2e-19
gi|154500385|ref|ZP_02038423.1| hypothetical protein BACCAP... 99 2e-19
gi|106880143|emb|CAJ70745.1| degV [Bacillus licheniformis] 99 2e-19
gi|154249059|ref|YP_001409884.1| degV family protein [Fervi... 99 2e-19
gi|55980919|ref|YP_144216.1| DegV family protein [Thermus t... 99 2e-19
gi|16078175|ref|NP_388992.1| hypothetical protein BSU11110 ... 99 2e-19
gi|156740621|ref|YP_001430750.1| degV family protein [Rosei... 99 2e-19
gi|157075516|gb|ABV10199.1| DegV family protein [Streptococ... 99 3e-19
gi|24378680|ref|NP_720635.1| hypothetical protein SMU.165 [... 99 3e-19
gi|46198892|ref|YP_004559.1| probable degV protein [Thermus... 99 4e-19
gi|116670793|ref|YP_831726.1| degV family protein [Arthroba... 98 5e-19
gi|75763900|ref|ZP_00743539.1| DegV family protein [Bacillu... 98 5e-19
gi|106886839|ref|ZP_01354168.1| degV family protein [Clostr... 98 6e-19
gi|153853918|ref|ZP_01995251.1| hypothetical protein DORLON... 97 7e-19
gi|18310292|ref|NP_562226.1| hypothetical protein CPE1310 [... 97 1e-18
gi|153940838|ref|YP_001389581.1| DegV family protein [Clost... 97 1e-18
gi|148378221|ref|YP_001252762.1| hypothetical protein CBO02... 97 1e-18
gi|110800233|ref|YP_695960.1| degV family protein [Clostrid... 97 1e-18
gi|24379351|ref|NP_721306.1| hypothetical protein SMU.899 [... 97 1e-18
gi|110801848|ref|YP_698629.1| degV family protein [Clostrid... 97 2e-18
gi|125718825|ref|YP_001035958.1| Conserved uncharacterized ... 97 2e-18
gi|119716117|ref|YP_923082.1| degV family protein [Nocardio... 96 2e-18
gi|18309008|ref|NP_560942.1| hypothetical protein CPE0026 [... 96 2e-18
gi|157076026|gb|ABV10709.1| DegV family fatty acid binding ... 96 2e-18
gi|81096797|ref|ZP_00875127.1| DegV [Streptococcus suis 89/... 96 2e-18
gi|146318481|ref|YP_001198193.1| hypothetical protein SSU05... 96 3e-18
gi|114565996|ref|YP_753150.1| DegV family protein [Syntroph... 95 4e-18
gi|110802923|ref|YP_699765.1| degV family protein [Clostrid... 95 5e-18
gi|108804208|ref|YP_644145.1| degV family protein [Rubrobac... 95 6e-18
gi|55822080|ref|YP_140521.1| hypothetical protein str0090 [... 95 6e-18
gi|78043050|ref|YP_360361.1| degV family protein [Carboxydo... 95 6e-18
gi|148380528|ref|YP_001255069.1| DegV family protein [Clost... 94 7e-18
gi|89209836|ref|ZP_01188230.1| DegV [Halothermothrix orenii... 94 7e-18
gi|153931007|ref|YP_001382622.1| DegV family protein [Clost... 94 7e-18
gi|58337431|ref|YP_194016.1| putative family protein [Lacto... 94 8e-18
gi|69247563|ref|ZP_00604397.1| DegV [Enterococcus faecium D... 94 1e-17
gi|110800855|ref|YP_697196.1| degV family protein [Clostrid... 94 1e-17
gi|46198840|ref|YP_004507.1| degV protein [Thermus thermoph... 94 1e-17
gi|125717914|ref|YP_001035047.1| Conserved uncharacterized ... 94 1e-17
gi|55820192|ref|YP_138634.1| hypothetical protein stu0090 [... 94 1e-17
gi|110803370|ref|YP_697375.1| degV family protein [Clostrid... 94 1e-17
gi|150391329|ref|YP_001321378.1| degV family protein [Alkal... 93 2e-17
gi|4105402|gb|AAD02410.1| unknown [Staphylococcus epidermidis] 93 2e-17
gi|153853966|ref|ZP_01995299.1| hypothetical protein DORLON... 93 2e-17
gi|153938480|ref|YP_001391870.1| DegV family protein [Clost... 93 2e-17
gi|141183|sp|P13977|YP15_STAAU UPF0230 15.5 kDa protein >gi... 93 2e-17
gi|134098020|ref|YP_001103681.1| hypothetical protein SACE_... 93 2e-17
gi|116627050|ref|YP_819669.1| hypothetical protein STER_012... 93 2e-17
gi|116334076|ref|YP_795603.1| hypothetical protein LVIS_147... 92 2e-17
gi|73663276|ref|YP_302057.1| hypothetical protein SSP1967 [... 92 2e-17
gi|126698916|ref|YP_001087813.1| hypothetical protein CD131... 92 3e-17
gi|18311491|ref|NP_563425.1| hypothetical protein CPE2509 [... 92 3e-17
gi|89894031|ref|YP_517518.1| hypothetical protein DSY1285 [... 92 3e-17
gi|109644801|ref|ZP_01368721.1| degV family protein [Desulf... 92 4e-17
gi|89894416|ref|YP_517903.1| hypothetical protein DSY1670 [... 92 4e-17
gi|134102635|ref|YP_001108296.1| DegV family protein [Sacch... 92 5e-17
gi|33416236|ref|NP_877982.1| hypothetical protein VRA0003 [... 91 5e-17
gi|28211626|ref|NP_782570.1| degV protein [Clostridium teta... 91 6e-17
gi|109646465|ref|ZP_01370369.1| degV family protein [Desulf... 91 6e-17
gi|153811951|ref|ZP_01964619.1| hypothetical protein RUMOBE... 91 6e-17
gi|28379968|ref|NP_786860.1| DegV family protein [Lactobaci... 91 6e-17
gi|22536395|ref|NP_687246.1| DegV family protein [Streptoco... 91 7e-17
gi|154504452|ref|ZP_02041190.1| hypothetical protein RUMGNA... 91 7e-17
gi|145621600|ref|ZP_01777569.1| DegV family protein [Petrot... 91 7e-17
gi|11065683|emb|CAC14295.1| unnamed protein product [Clostr... 91 7e-17
gi|106893845|ref|ZP_01360969.1| DegV [Clostridium sp. OhILA... 91 1e-16
gi|2274932|emb|CAA74648.1| hypothetical protein Y [Eubacter... 91 1e-16
gi|150388596|ref|YP_001318645.1| degV family protein [Alkal... 90 1e-16
gi|154483486|ref|ZP_02025934.1| hypothetical protein EUBVEN... 90 1e-16
gi|27467449|ref|NP_764086.1| hypothetical protein SE0531 [S... 90 2e-16
gi|139439081|ref|ZP_01772533.1| Hypothetical protein COLAER... 90 2e-16
gi|150014959|ref|YP_001307213.1| degV family protein [Clost... 90 2e-16
gi|68054879|ref|ZP_00539028.1| DegV [Exiguobacterium sibiri... 90 2e-16
gi|15805527|ref|NP_294223.1| hypothetical protein DR_0500 [... 89 2e-16
gi|119883788|ref|ZP_01650037.1| degV family protein [Salini... 89 2e-16
gi|154500581|ref|ZP_02038619.1| hypothetical protein BACCAP... 89 2e-16
gi|110801244|ref|YP_694499.1| degV family protein [Clostrid... 89 3e-16
gi|89893971|ref|YP_517458.1| hypothetical protein DSY1225 [... 89 3e-16
gi|148270454|ref|YP_001244914.1| degV family protein [Therm... 89 4e-16
gi|114567415|ref|YP_754569.1| hypothetical protein Swol_190... 88 4e-16
gi|153810153|ref|ZP_01962821.1| hypothetical protein RUMOBE... 88 4e-16
gi|15894235|ref|NP_347584.1| Uncharacterized protein, DegV ... 88 6e-16
gi|111018303|ref|YP_701275.1| hypothetical protein RHA1_ro0... 87 9e-16
gi|106886943|ref|ZP_01354268.1| DegV [Clostridium phytoferm... 87 1e-15
gi|15644217|ref|NP_229268.1| hypothetical protein TM1468 [T... 87 1e-15
gi|153940557|ref|YP_001390664.1| DegV family protein [Clost... 87 1e-15
gi|24159065|pdb|1MGP|A Chain A, Hypothetical Protein Tm841 ... 87 1e-15
gi|82750453|ref|YP_416194.1| hypothetical protein SAB0701 [... 87 1e-15
gi|15673853|ref|NP_268028.1| hypothetical protein L123851 [... 87 1e-15
gi|148379290|ref|YP_001253831.1| hypothetical protein CBO13... 87 1e-15
gi|116628709|ref|YP_813881.1| hypothetical protein LGAS_002... 87 1e-15
gi|145595982|ref|YP_001160279.1| degV family protein [Salin... 86 2e-15
gi|150019933|ref|YP_001305287.1| degV family protein [Therm... 86 2e-15
gi|58177028|pdb|1VPV|A Chain A, Crystal Structure Of Upf023... 86 3e-15
gi|21282440|ref|NP_645528.1| hypothetical protein MW0711 [S... 86 3e-15
gi|15923739|ref|NP_371273.1| hypothetical protein SAV0749 [... 86 3e-15
gi|42518110|ref|NP_964040.1| hypothetical protein LJ0025 [L... 85 4e-15
gi|154498455|ref|ZP_02036833.1| hypothetical protein BACCAP... 85 4e-15
gi|149183768|ref|ZP_01862172.1| YitS [Bacillus sp. SG-1] >g... 85 4e-15
gi|106884974|ref|ZP_01352340.1| degV family protein [Clostr... 85 5e-15
gi|125623780|ref|YP_001032263.1| hypothetical protein llmg_... 85 5e-15
gi|68056134|ref|ZP_00540267.1| DegV [Exiguobacterium sibiri... 85 5e-15
gi|148988610|ref|ZP_01820043.1| degV family protein [Strept... 84 6e-15
gi|15901400|ref|NP_346004.1| degV family protein [Streptoco... 84 7e-15
gi|15903458|ref|NP_359008.1| hypothetical protein spr1415 [... 84 7e-15
gi|23098062|ref|NP_691528.1| hypothetical protein OB0607 [O... 84 7e-15
gi|116514042|ref|YP_812948.1| hypothetical protein LBUL_093... 84 8e-15
gi|21911203|ref|NP_665471.1| hypothetical protein SpyM3_166... 84 8e-15
gi|138894304|ref|YP_001124757.1| hypothetical protein GTNG_... 84 9e-15
gi|28210597|ref|NP_781541.1| degV family protein [Clostridi... 84 9e-15
gi|85057379|ref|YP_456295.1| DegV family protein [Aster yel... 84 9e-15
gi|22537489|ref|NP_688340.1| DegV family protein [Streptoco... 84 1e-14
gi|94991227|ref|YP_599327.1| Fatty acid-binding protein, De... 84 1e-14
gi|153954964|ref|YP_001395729.1| hypothetical protein CKL_2... 84 1e-14
gi|150016731|ref|YP_001308985.1| degV family protein [Clost... 84 1e-14
gi|94995140|ref|YP_603238.1| Fatty acid-binding protein, De... 84 1e-14
gi|70727141|ref|YP_254057.1| hypothetical protein SH2142 [S... 83 1e-14
gi|15675739|ref|NP_269913.1| hypothetical protein SPy_1936 ... 83 1e-14
gi|148984909|ref|ZP_01818162.1| DegV family protein [Strept... 83 1e-14
gi|119964504|ref|YP_947986.1| putative uncharacterized degV... 83 2e-14
gi|42543340|pdb|1PZX|A Chain A, Hypothetical Protein Apc361... 83 2e-14
gi|56419280|ref|YP_146598.1| hypothetical protein GK0745 [G... 83 2e-14
gi|139474426|ref|YP_001129142.1| DegV family protein [Strep... 83 2e-14
gi|108803238|ref|YP_643175.1| degV family protein [Rubrobac... 83 2e-14
gi|56807803|ref|ZP_00365652.1| COG1307: Uncharacterized pro... 83 2e-14
gi|118046980|ref|ZP_01515624.1| DegV [Chloroflexus aggregan... 83 2e-14
gi|89210959|ref|ZP_01189340.1| DegV [Halothermothrix orenii... 82 3e-14
gi|116512359|ref|YP_809575.1| hypothetical protein LACR_165... 82 3e-14
gi|15894902|ref|NP_348251.1| Uncharacterized protein from D... 82 3e-14
gi|118587287|ref|ZP_01544714.1| hypothetical protein OENOO_... 82 3e-14
gi|52840458|ref|YP_094257.1| fusion of two types of conserv... 82 3e-14
gi|154484320|ref|ZP_02026768.1| hypothetical protein EUBVEN... 82 3e-14
gi|106886326|ref|ZP_01353668.1| DegV [Clostridium phytoferm... 82 4e-14
gi|153854704|ref|ZP_01995954.1| hypothetical protein DORLON... 82 4e-14
gi|116491499|ref|YP_811043.1| hypothetical protein OEOE_152... 82 4e-14
gi|15673544|ref|NP_267718.1| hypothetical protein L4747 [La... 82 5e-14
gi|106885616|ref|ZP_01352973.1| degV family protein [Clostr... 81 6e-14
gi|39939122|ref|NP_950888.1| uncharacterized BCR [Onion yel... 81 6e-14
gi|156863768|gb|EDO57199.1| hypothetical protein CLOL250_02... 81 7e-14
gi|116492177|ref|YP_803912.1| hypothetical protein PEPE_037... 81 8e-14
gi|29375766|ref|NP_814920.1| DegV family protein [Enterococ... 81 8e-14
gi|139473968|ref|YP_001128684.1| DegV family protein [Strep... 80 1e-13
gi|81097209|ref|ZP_00875512.1| DegV [Streptococcus suis 89/... 80 1e-13
gi|94985184|ref|YP_604548.1| DegV [Deinococcus geothermalis... 80 1e-13
gi|77409663|ref|ZP_00786333.1| DegV family protein [Strepto... 80 1e-13
gi|19745935|ref|NP_607071.1| hypothetical protein spyM18_09... 80 1e-13
gi|114567020|ref|YP_754174.1| hypothetical protein Swol_150... 80 2e-13
gi|146318215|ref|YP_001197927.1| hypothetical protein SSU05... 80 2e-13
gi|146320409|ref|YP_001200120.1| hypothetical protein SSU98... 80 2e-13
gi|153855817|ref|ZP_01996803.1| hypothetical protein DORLON... 80 2e-13
gi|118444706|ref|YP_877000.1| DegV family protein, putative... 80 2e-13
gi|156869432|gb|EDO62804.1| hypothetical protein CLOLEP_003... 79 2e-13
gi|56808915|ref|ZP_00366624.1| COG1307: Uncharacterized pro... 79 2e-13
gi|148378591|ref|YP_001253132.1| hypothetical protein CBO05... 79 3e-13
gi|21910122|ref|NP_664390.1| hypothetical protein SpyM3_058... 79 3e-13
gi|116491500|ref|YP_811044.1| hypothetical protein OEOE_152... 79 3e-13
gi|118587288|ref|ZP_01544715.1| hypothetical protein OENOO_... 79 3e-13
gi|15675555|ref|NP_269729.1| hypothetical protein SPy_1698 ... 79 4e-13
gi|153939413|ref|YP_001389956.1| degV family protein [Clost... 79 4e-13
gi|15674893|ref|NP_269067.1| hypothetical protein SPy_0865 ... 79 4e-13
gi|116512749|ref|YP_811656.1| hypothetical protein LACR_206... 78 4e-13
gi|90962744|ref|YP_536659.1| DegV family protein [Lactobaci... 78 6e-13
gi|15896529|ref|NP_349878.1| Uncharacterized conserved prot... 78 6e-13
gi|28379075|ref|NP_785967.1| DegV family protein [Lactobaci... 77 8e-13
gi|125624834|ref|YP_001033317.1| Hypothetical protein yteA ... 77 9e-13
gi|54293210|ref|YP_125625.1| hypothetical protein lpl0258 [... 77 1e-12
gi|21911014|ref|NP_665282.1| hypothetical protein SpyM3_147... 77 1e-12
gi|94992913|ref|YP_601012.1| DegV family protein [Streptoco... 77 1e-12
gi|62426406|ref|ZP_00381534.1| COG1307: Uncharacterized pro... 77 1e-12
gi|54296237|ref|YP_122606.1| hypothetical protein lpp0263 [... 77 1e-12
gi|19746606|ref|NP_607742.1| hypothetical protein spyM18_17... 77 2e-12
gi|89211404|ref|ZP_01189771.1| DegV [Halothermothrix orenii... 76 2e-12
gi|153953301|ref|YP_001394066.1| hypothetical protein CKL_0... 76 3e-12
gi|153953916|ref|YP_001394681.1| hypothetical protein CKL_1... 75 3e-12
gi|89209268|ref|ZP_01187712.1| DegV [Bacillus weihenstephan... 75 5e-12
gi|68055989|ref|ZP_00540126.1| DegV [Exiguobacterium sibiri... 75 5e-12
gi|116629660|ref|YP_814832.1| hypothetical protein LGAS_101... 75 6e-12
gi|28211335|ref|NP_782279.1| conserved protein, putative de... 75 6e-12
gi|94985495|ref|YP_604859.1| degV family protein [Deinococc... 74 8e-12
gi|28377873|ref|NP_784765.1| DegV family protein [Lactobaci... 74 9e-12
gi|30020791|ref|NP_832422.1| DEGV protein [Bacillus cereus ... 74 1e-11
gi|154483485|ref|ZP_02025933.1| hypothetical protein EUBVEN... 73 2e-11
gi|50313182|gb|AAT74539.1| DegV [Listeria monocytogenes] 73 2e-11
gi|149180749|ref|ZP_01859252.1| hypothetical protein BSG1_1... 73 2e-11
gi|30262638|ref|NP_845015.1| degV family protein [Bacillus ... 73 2e-11
gi|156868242|gb|EDO61614.1| hypothetical protein CLOLEP_020... 73 2e-11
gi|118478040|ref|YP_895191.1| degV family protein [Bacillus... 73 2e-11
gi|47459013|ref|YP_015875.1| degV homolog [Mycoplasma mobil... 72 3e-11
gi|47569616|ref|ZP_00240293.1| DegV family protein, putativ... 72 3e-11
gi|106886814|ref|ZP_01354144.1| degV family protein [Clostr... 72 3e-11
gi|139438416|ref|ZP_01771932.1| Hypothetical protein COLAER... 72 3e-11
gi|67941344|ref|ZP_00533515.1| DegV:Dak phosphatase [Chloro... 72 5e-11
gi|19553548|ref|NP_601550.1| hypothetical protein NCgl2267 ... 72 5e-11
gi|146319553|ref|YP_001199265.1| hypothetical protein SSU05... 71 7e-11
gi|148358413|ref|YP_001249620.1| hypothetical protein LPC_0... 71 7e-11
gi|116490975|ref|YP_810519.1| hypothetical protein OEOE_094... 71 9e-11
gi|77409472|ref|ZP_00786164.1| DegV family protein [Strepto... 70 1e-10
gi|94985203|ref|YP_604567.1| degV family protein [Deinococc... 70 1e-10
gi|118444141|ref|YP_878094.1| degV protein [Clostridium nov... 70 1e-10
gi|118586472|ref|ZP_01543917.1| hypothetical protein, DegV ... 70 1e-10
gi|154496469|ref|ZP_02035165.1| hypothetical protein BACCAP... 70 1e-10
gi|154249302|ref|YP_001410127.1| DegV family protein [Fervi... 70 1e-10
gi|77412649|ref|ZP_00788922.1| DegV family protein [Strepto... 70 2e-10
gi|145296317|ref|YP_001139138.1| hypothetical protein cgR_2... 70 2e-10
gi|69246719|ref|ZP_00604087.1| DegV [Enterococcus faecium D... 70 2e-10
gi|38234343|ref|NP_940110.1| hypothetical protein DIP1772 [... 70 2e-10
gi|126654450|ref|ZP_01726186.1| YitS [Bacillus sp. B14905] ... 70 2e-10
gi|139439003|ref|ZP_01772463.1| Hypothetical protein COLAER... 70 2e-10
gi|150020191|ref|YP_001305545.1| DegV family protein [Therm... 70 2e-10
gi|15806903|ref|NP_295626.1| hypothetical protein DR_1903 [... 70 2e-10
gi|125624123|ref|YP_001032606.1| hypothetical protein llmg_... 70 2e-10
gi|149007620|ref|ZP_01831237.1| hypothetical protein CGSSp1... 70 2e-10
gi|116617279|ref|YP_817650.1| hypothetical protein LEUM_012... 69 2e-10
gi|150019258|ref|YP_001311512.1| DegV family protein [Clost... 69 2e-10
gi|116494571|ref|YP_806305.1| hypothetical protein LSEI_106... 69 2e-10
gi|154498111|ref|ZP_02036489.1| hypothetical protein BACCAP... 69 2e-10
gi|15900637|ref|NP_345241.1| hypothetical protein SP_0742 [... 69 2e-10
gi|148997183|ref|ZP_01824837.1| hypothetical protein CGSSp1... 69 2e-10
gi|68535642|ref|YP_250347.1| hypothetical protein jk0570 [C... 69 3e-10
gi|113938484|ref|ZP_01424351.1| DegV [Herpetosiphon auranti... 69 3e-10
gi|153814619|ref|ZP_01967287.1| hypothetical protein RUMTOR... 69 4e-10
gi|15829237|ref|NP_326597.1| hypothetical protein MYPU_7660... 68 5e-10
gi|118618956|ref|YP_907288.1| hypothetical protein MUL_3689... 68 7e-10
gi|58337195|ref|YP_193780.1| hypothetical protein LBA0890 [... 68 7e-10
gi|15672563|ref|NP_266737.1| hypothetical protein L174523 [... 67 9e-10
gi|31544514|ref|NP_853092.1| hypothetical protein MGA_1184 ... 67 9e-10
gi|76259988|ref|ZP_00767630.1| DegV [Chloroflexus aurantiac... 67 9e-10
gi|116334410|ref|YP_795937.1| hypothetical protein LVIS_184... 67 9e-10
gi|120404876|ref|YP_954705.1| degV family protein [Mycobact... 67 1e-09
gi|94994900|ref|YP_602998.1| DegV family protein [Streptoco... 66 2e-09
gi|25028809|ref|NP_738863.1| hypothetical protein CE2253 [C... 65 3e-09
gi|39939069|ref|NP_950835.1| uncharacterized BCR [Onion yel... 64 7e-09
gi|16799674|ref|NP_469942.1| hypothetical protein lin0599 [... 64 8e-09
gi|4580621|gb|AAD24444.1|AF118389_1 unknown [Streptococcus ... 64 9e-09
gi|110003546|emb|CAJ87488.1| DegV family protein [Candidatu... 64 1e-08
gi|12045184|ref|NP_072995.1| degV family protein [Mycoplasm... 64 1e-08
gi|89210007|ref|ZP_01188400.1| DegV [Halothermothrix orenii... 64 1e-08
gi|154505714|ref|ZP_02042452.1| hypothetical protein RUMGNA... 64 1e-08
gi|145621517|ref|ZP_01777486.1| degV family protein [Petrot... 63 2e-08
gi|104774180|ref|YP_619160.1| hypothetical protein Ldb1293 ... 63 2e-08
gi|47459014|ref|YP_015876.1| degV homolog [Mycoplasma mobil... 63 2e-08
gi|85057524|ref|YP_456440.1| DegV family protein [Aster yel... 63 2e-08
gi|153814472|ref|ZP_01967140.1| hypothetical protein RUMTOR... 63 2e-08
gi|83320049|ref|YP_424610.1| hypothetical protein MCAP_0642... 62 3e-08
gi|118464386|ref|YP_880979.1| DegV family protein [Mycobact... 62 3e-08
gi|153853965|ref|ZP_01995298.1| hypothetical protein DORLON... 62 4e-08
gi|54023347|ref|YP_117589.1| hypothetical protein nfa13800 ... 62 4e-08
gi|153195223|ref|ZP_01940021.1| hypothetical protein LMRG_0... 62 5e-08
gi|41408338|ref|NP_961174.1| hypothetical protein MAP2240c ... 62 5e-08
gi|110004031|emb|CAK98371.1| hypothetical degv family prote... 61 6e-08
gi|110004032|emb|CAK98372.1| hypothetical degv family trans... 61 6e-08
gi|144575202|gb|AAZ44027.2| conserved hypothetical protein ... 61 6e-08
gi|71894630|ref|YP_278738.1| hypothetical protein MS53_0620... 61 7e-08
gi|153173465|ref|ZP_01929223.1| hypothetical protein LMIG_0... 61 8e-08
gi|154502804|ref|ZP_02039864.1| hypothetical protein RUMGNA... 61 8e-08
gi|153189981|ref|ZP_01937426.1| hypothetical protein LMPG_0... 61 8e-08
gi|16802633|ref|NP_464118.1| hypothetical protein lmo0590 [... 61 8e-08
gi|47096883|ref|ZP_00234462.1| DAK2 domain protein [Listeri... 61 9e-08
gi|42519115|ref|NP_965045.1| hypothetical protein LJ1190 [L... 60 1e-07
gi|116514270|ref|YP_813176.1| hypothetical protein LBUL_120... 60 1e-07
gi|139439953|ref|ZP_01773290.1| Hypothetical protein COLAER... 60 1e-07
gi|125717861|ref|YP_001034994.1| hypothetical protein SSA_1... 60 1e-07
gi|46906835|ref|YP_013224.1| DAK2 domain protein [Listeria ... 60 1e-07
gi|153165886|ref|ZP_01926551.1| hypothetical protein LMHG_0... 60 1e-07
gi|68612975|gb|AAY99445.1| unknown [Streptococcus gordonii] 60 1e-07
gi|116871977|ref|YP_848758.1| DAK2/DegV domain protein [Lis... 60 2e-07
gi|89097201|ref|ZP_01170091.1| hypothetical protein B14911_... 60 2e-07
gi|153955131|ref|YP_001395896.1| hypothetical protein CKL_2... 59 3e-07
gi|157075944|gb|ABV10627.1| degV family protein [Streptococ... 59 3e-07
gi|108800492|ref|YP_640689.1| degV family protein [Mycobact... 59 3e-07
gi|126436108|ref|YP_001071799.1| degV family protein [Mycob... 59 3e-07
gi|75764720|ref|ZP_00744131.1| DEGV protein [Bacillus thuri... 59 3e-07
gi|47459367|ref|YP_016229.1| degV homolog [Mycoplasma mobil... 59 3e-07
gi|58336368|ref|YP_192953.1| hypothetical protein LBA0015 [... 59 4e-07
gi|55822398|ref|YP_140839.1| conserved hypothetical protein... 59 4e-07
>gi|125717536|ref|YP_001034669.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
gi|125497453|gb|ABN44119.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
Length = 277
Score = 502 bits (1293), Expect = e-141, Method: Composition-based stats.
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPK 60
MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPK
Sbjct: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPK 60
Query: 61 TSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQ 120
TSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQ
Sbjct: 61 TSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQ 120
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS
Sbjct: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM
Sbjct: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
Query: 241 KESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
KESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE
Sbjct: 241 KESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
>gi|157075638|gb|ABV10321.1| DegV family protein [Streptococcus gordonii str. Challis substr.
CH1]
Length = 277
Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats.
Identities = 220/276 (79%), Positives = 249/276 (90%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPK 60
M KIKIVTDSSVTIEPEV K+LDITIVPLSVMVDGVVYSD+DL+EGEFLRLM+ S+NLPK
Sbjct: 1 MAKIKIVTDSSVTIEPEVVKDLDITIVPLSVMVDGVVYSDSDLKEGEFLRLMKESKNLPK 60
Query: 61 TSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQ 120
TSQPPVGVFA+VF+ LAE II+IHMSHALSGT+EAARQGATLANADVT++DSSF DQ
Sbjct: 61 TSQPPVGVFAEVFETLAETADHIIAIHMSHALSGTIEAARQGATLANADVTIIDSSFTDQ 120
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
A+KFQV EAAKLAK GADL+EI+ +IEEVKEK+ELYIG+STLENLVKGGRIGRV+GLISS
Sbjct: 121 ALKFQVVEAAKLAKAGADLDEILQRIEEVKEKSELYIGVSTLENLVKGGRIGRVTGLISS 180
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
LLNIRV+MQMK+HQL+ I+KGRG KTFKKWL++L L N V E+GISYAG+P A EM
Sbjct: 181 LLNIRVVMQMKNHQLQTIIKGRGDKTFKKWLNELEDKLTNADVEEIGISYAGTPAYATEM 240
Query: 241 KESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRY 276
KE LQ +V+K ISVLETGSIIQTHTGENAWA+LIRY
Sbjct: 241 KERLQKFVEKSISVLETGSIIQTHTGENAWAILIRY 276
>gi|148985085|ref|ZP_01818328.1| bifunctional riboflavin kinase/FMN adenylyltransferase
[Streptococcus pneumoniae SP3-BS71]
gi|148998382|ref|ZP_01825824.1| DegV family protein [Streptococcus pneumoniae SP11-BS70]
gi|147755779|gb|EDK62824.1| DegV family protein [Streptococcus pneumoniae SP11-BS70]
gi|147922783|gb|EDK73900.1| bifunctional riboflavin kinase/FMN adenylyltransferase
[Streptococcus pneumoniae SP3-BS71]
Length = 279
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 217/277 (78%), Positives = 253/277 (91%), Gaps = 1/277 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLP 59
MTKIKIVTDSSVTIEPE+ K+LDITIVPLSVM+D VVYSDADL EEG+FL+LMQ S+NLP
Sbjct: 1 MTKIKIVTDSSVTIEPELVKQLDITIVPLSVMIDNVVYSDADLKEEGKFLQLMQESKNLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPPVGVFA++F+ L +DG QI++IHMSHALSGTVEAARQGA+L+ ADVTVVDSSF D
Sbjct: 61 KTSQPPVGVFAEIFEDLCKDGGQILAIHMSHALSGTVEAARQGASLSTADVTVVDSSFTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
QA+KFQV EAAKLA+EG D+E I++ +EEVK TELYIG+STLENLVKGGRIGRV+GL+S
Sbjct: 121 QALKFQVVEAAKLAQEGKDMEAILSHVEEVKNHTELYIGVSTLENLVKGGRIGRVTGLLS 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLLNIRV+MQMKDH+L+P+VKGRG KTFKKWLD+L +L + VAE+GISY+GS + A+E
Sbjct: 181 SLLNIRVVMQMKDHELQPMVKGRGTKTFKKWLDELITSLSERAVAEIGISYSGSDDWAKE 240
Query: 240 MKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRY 276
MKESLQ YV+KPISVLETGSIIQTHTGENAWA+LIRY
Sbjct: 241 MKESLQAYVEKPISVLETGSIIQTHTGENAWAILIRY 277
>gi|149003769|ref|ZP_01828601.1| DegV family protein [Streptococcus pneumoniae SP14-BS69]
gi|147758215|gb|EDK65217.1| DegV family protein [Streptococcus pneumoniae SP14-BS69]
Length = 279
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 216/277 (77%), Positives = 253/277 (91%), Gaps = 1/277 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLP 59
MTKIKIVTDSSVTIEPE+ K+LDITIVPLSVM+D VVYSDADL EEG+FL+LMQ S+NLP
Sbjct: 1 MTKIKIVTDSSVTIEPELVKQLDITIVPLSVMIDNVVYSDADLKEEGKFLQLMQESKNLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPPVGVFA++F+ L +DG QI++IHMSHALSGTVEAARQGA+L+ ADVTVVDSSF D
Sbjct: 61 KTSQPPVGVFAEIFEDLCKDGGQILAIHMSHALSGTVEAARQGASLSTADVTVVDSSFTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
QA+KFQV EAAKLA+EG D+E I++ +EEVK TELYIG+STLENLVKGGRIGRV+GL+S
Sbjct: 121 QALKFQVVEAAKLAQEGKDMEAILSHVEEVKNHTELYIGVSTLENLVKGGRIGRVTGLLS 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLLNIRV+MQMK+H+L+P+VKGRG KTFKKWLD+L +L + VAE+GISY+GS + A+E
Sbjct: 181 SLLNIRVVMQMKNHELQPMVKGRGTKTFKKWLDELITSLSERTVAEIGISYSGSDDWAKE 240
Query: 240 MKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRY 276
MKESLQ YV+KPISVLETGSIIQTHTGENAWA+LIRY
Sbjct: 241 MKESLQAYVEKPISVLETGSIIQTHTGENAWAILIRY 277
>gi|15903063|ref|NP_358613.1| hypothetical protein spr1019 [Streptococcus pneumoniae R6]
gi|116517176|ref|YP_816471.1| DegV family protein [Streptococcus pneumoniae D39]
gi|73920487|sp|Q8DPT4|Y1019_STRR6 UPF0230 protein spr1019
gi|15458636|gb|AAK99823.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116077752|gb|ABJ55472.1| DegV family protein [Streptococcus pneumoniae D39]
Length = 279
Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats.
Identities = 216/277 (77%), Positives = 252/277 (90%), Gaps = 1/277 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLP 59
MTKIKIVTDSSVTIEPE+ K+LDITIVPLSVM+D VVYSDADL EEG+FL+LMQ S+NLP
Sbjct: 1 MTKIKIVTDSSVTIEPELVKQLDITIVPLSVMIDNVVYSDADLKEEGKFLQLMQESKNLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPPVGVFA++F+ L +DG QI++IHMSHALSGTVEAARQGA+L+ ADV VVDSSF D
Sbjct: 61 KTSQPPVGVFAEIFEDLCKDGGQILAIHMSHALSGTVEAARQGASLSTADVIVVDSSFTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
QA+KFQV EAAKLA+EG D+E I++ +EEVK TELYIG+STLENLVKGGRIGRV+GL+S
Sbjct: 121 QALKFQVVEAAKLAQEGKDMEAILSHVEEVKNHTELYIGVSTLENLVKGGRIGRVTGLLS 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLLNIRV+MQMKDH+L+P+VKGRG KTFKKWLD+L +L + VAE+GISY+GS + A+E
Sbjct: 181 SLLNIRVVMQMKDHELQPMVKGRGTKTFKKWLDELITSLSERAVAEIGISYSGSDDWAKE 240
Query: 240 MKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRY 276
MKESLQ YV+KPISVLETGSIIQTHTGENAWA+LIRY
Sbjct: 241 MKESLQAYVEKPISVLETGSIIQTHTGENAWAILIRY 277
>gi|148989156|ref|ZP_01820546.1| degV family protein [Streptococcus pneumoniae SP6-BS73]
gi|148994561|ref|ZP_01823720.1| degV family protein [Streptococcus pneumoniae SP9-BS68]
gi|149006211|ref|ZP_01829923.1| degV family protein [Streptococcus pneumoniae SP18-BS74]
gi|149012892|ref|ZP_01833805.1| degV family protein [Streptococcus pneumoniae SP19-BS75]
gi|147761988|gb|EDK68950.1| degV family protein [Streptococcus pneumoniae SP18-BS74]
gi|147763181|gb|EDK70121.1| degV family protein [Streptococcus pneumoniae SP19-BS75]
gi|147925379|gb|EDK76457.1| degV family protein [Streptococcus pneumoniae SP6-BS73]
gi|147927155|gb|EDK78192.1| degV family protein [Streptococcus pneumoniae SP9-BS68]
Length = 279
Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats.
Identities = 216/277 (77%), Positives = 252/277 (90%), Gaps = 1/277 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLP 59
MTKIKIVTDSSVTIEPE+ K+LDITIVPLSVM+D VVYSDADL EEG+FL+LMQ S+NLP
Sbjct: 1 MTKIKIVTDSSVTIEPELVKQLDITIVPLSVMIDNVVYSDADLKEEGKFLQLMQESKNLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPPVGVFA++F+ L +DG QI++IHMSHALSGTVEAARQGA+L+ ADVTVVDSSF D
Sbjct: 61 KTSQPPVGVFAEIFEDLCKDGGQILAIHMSHALSGTVEAARQGASLSTADVTVVDSSFTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
QA+KFQV EAAKLA+EG D+E I++ +EEVK TELYIG+STLENLVKGGRI RV+GL+S
Sbjct: 121 QALKFQVVEAAKLAQEGKDMEAILSHVEEVKNHTELYIGVSTLENLVKGGRISRVTGLLS 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLLNIRV+MQMKDH+L+P+VKGRG KTFKKWLD+L +L + VAE+GISY+GS + A+E
Sbjct: 181 SLLNIRVVMQMKDHELQPMVKGRGTKTFKKWLDELITSLSERAVAEIGISYSGSDDWAKE 240
Query: 240 MKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRY 276
MKESLQ YV+KPISVLETGSIIQTHTGENAWA+LIRY
Sbjct: 241 MKESLQAYVEKPISVLETGSIIQTHTGENAWAILIRY 277
>gi|15900979|ref|NP_345583.1| degV family protein [Streptococcus pneumoniae TIGR4]
gi|111658013|ref|ZP_01408717.1| hypothetical protein SpneT_02000810 [Streptococcus pneumoniae
TIGR4]
gi|149024914|ref|ZP_01836315.1| degV family protein [Streptococcus pneumoniae SP23-BS72]
gi|30179858|sp|Q97QT7|Y1112_STRPN UPF0230 protein SP_1112
gi|14972588|gb|AAK75223.1| degV family protein [Streptococcus pneumoniae TIGR4]
gi|147929537|gb|EDK80531.1| degV family protein [Streptococcus pneumoniae SP23-BS72]
Length = 279
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 215/277 (77%), Positives = 251/277 (90%), Gaps = 1/277 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLP 59
MTKIKIVTDSSVTIEPE+ K+LDITIVPLSVM+D VVYSDADL EEG+FL+LMQ S+NLP
Sbjct: 1 MTKIKIVTDSSVTIEPELVKQLDITIVPLSVMIDNVVYSDADLKEEGKFLQLMQESKNLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPPVGVFA++F+ L +DG QI++IHMSHALSGTVEAARQGA+L+ ADVTVVDSSF D
Sbjct: 61 KTSQPPVGVFAEIFEDLCKDGGQILAIHMSHALSGTVEAARQGASLSTADVTVVDSSFTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
QA+KFQV EAAKLA+EG D+E I++ +EEVK TELYIG+STLENLVKGGRI RV+GL+S
Sbjct: 121 QALKFQVVEAAKLAQEGKDMEAILSHVEEVKNHTELYIGVSTLENLVKGGRISRVTGLLS 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLLNIR +MQMKDH+L+P+VKGRG KTFKKWLD+L +L + VAE+GISY+GS + A+E
Sbjct: 181 SLLNIRAVMQMKDHELQPMVKGRGTKTFKKWLDELITSLSERAVAEIGISYSGSDDWAKE 240
Query: 240 MKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRY 276
MKESLQ YV+KPISVLETGSIIQTHTGENAWA+LIRY
Sbjct: 241 MKESLQAYVEKPISVLETGSIIQTHTGENAWAILIRY 277
>gi|81096214|ref|ZP_00874562.1| DegV [Streptococcus suis 89/1591]
gi|80977701|gb|EAP41236.1| DegV [Streptococcus suis 89/1591]
Length = 277
Score = 390 bits (1001), Expect = e-107, Method: Composition-based stats.
Identities = 208/277 (75%), Positives = 244/277 (88%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPK 60
M+KIKIVTDSS TIEP + +EL+IT+VPLSVMVDGVVYSD DL+EGEFL LM+ S+NLPK
Sbjct: 1 MSKIKIVTDSSTTIEPSLVEELNITVVPLSVMVDGVVYSDNDLKEGEFLELMRGSKNLPK 60
Query: 61 TSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQ 120
TSQPPVG+FA+ F LA+DG+QII+I +SHALSGTVEAARQGATL+ ADVT++DSSF DQ
Sbjct: 61 TSQPPVGLFAETFADLAKDGSQIIAILLSHALSGTVEAARQGATLSGADVTILDSSFTDQ 120
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
A KFQV EAA++A+ GA EEI+A IE VKEKTELYIG+STLENLVKGGRIGRV G++SS
Sbjct: 121 AEKFQVVEAARMAQAGASKEEILAAIETVKEKTELYIGVSTLENLVKGGRIGRVQGMLSS 180
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
LLNIRVIM+MKDHQL PIVKGRG KTFKKWL++ +A L +K+VAE+GISY+G+ + A EM
Sbjct: 181 LLNIRVIMEMKDHQLTPIVKGRGNKTFKKWLEEFTATLADKKVAEIGISYSGTADFANEM 240
Query: 241 KESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
K LQ YV K ISVLETGSIIQTHTGE+AWA+LIRYE
Sbjct: 241 KSQLQEYVSKEISVLETGSIIQTHTGEDAWAILIRYE 277
>gi|146319304|ref|YP_001199016.1| hypothetical protein SSU05_1650 [Streptococcus suis 05ZYH33]
gi|146321507|ref|YP_001201218.1| hypothetical protein SSU98_1660 [Streptococcus suis 98HAH33]
gi|145690110|gb|ABP90616.1| Uncharacterized protein conserved in bacteria [Streptococcus suis
05ZYH33]
gi|145692313|gb|ABP92818.1| Uncharacterized protein conserved in bacteria [Streptococcus suis
98HAH33]
Length = 277
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 207/277 (74%), Positives = 244/277 (88%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPK 60
M+KIKIVTDSS TIEP + +EL+IT+VPLSVMVDGVVYSD DL+EGEFL LM+ S+NLPK
Sbjct: 1 MSKIKIVTDSSTTIEPSLVEELNITVVPLSVMVDGVVYSDNDLKEGEFLELMRGSKNLPK 60
Query: 61 TSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQ 120
TSQPPVG+FA+ F LA+DG+QII+I +SHALSGTVEAARQGATL+ ADVT++DSSF DQ
Sbjct: 61 TSQPPVGLFAETFAELAKDGSQIIAILLSHALSGTVEAARQGATLSGADVTILDSSFTDQ 120
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
A KFQV EAA++A+ GA EEI+A IE VKEKTELYIG+STLENLVKGGRIGRV G++SS
Sbjct: 121 AEKFQVVEAARMAQAGASKEEILAAIETVKEKTELYIGVSTLENLVKGGRIGRVQGMLSS 180
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
LLNIRVIM+MKDHQL PIVKGRG KTFKKWL++ +A L +K+VAE+GISY+G+ + A EM
Sbjct: 181 LLNIRVIMEMKDHQLTPIVKGRGNKTFKKWLEEFTATLADKKVAEIGISYSGTADFANEM 240
Query: 241 KESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
K LQ YV K ISVLETGSIIQTHTGE+AWA+L+RYE
Sbjct: 241 KSQLQEYVSKEISVLETGSIIQTHTGEDAWAILLRYE 277
>gi|24379064|ref|NP_721019.1| hypothetical protein SMU.586 [Streptococcus mutans UA159]
gi|24376962|gb|AAN58325.1|AE014903_1 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 279
Score = 367 bits (941), Expect = e-100, Method: Composition-based stats.
Identities = 187/279 (67%), Positives = 249/279 (89%), Gaps = 2/279 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLP 59
M+KIKIVTDSS+TIEP++ + LDIT+VPL+VMVDG+VYSD DL E+G+FL LM++S++LP
Sbjct: 1 MSKIKIVTDSSITIEPDLVEALDITVVPLTVMVDGIVYSDNDLKEDGKFLSLMRNSKSLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGA-QIISIHMSHALSGTVEAARQGATLANADVTVVDSSFI 118
KTSQPPVG+FA+ +++L ++GA QI++IH++H+LSGT+EA+RQGA +A ADVTV+DS+F
Sbjct: 61 KTSQPPVGLFAETYEKLIKEGAEQIVAIHITHSLSGTLEASRQGANIAGADVTVLDSAFT 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
DQAMKFQV AAKLA++G+ LEEI+A++EEVK+KTEL+IG+STLENLVKGGRIGRV+GLI
Sbjct: 121 DQAMKFQVIAAAKLAQKGSSLEEILARVEEVKKKTELFIGVSTLENLVKGGRIGRVTGLI 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SSLLNIRV+M++K+H L PI KGRG KTF KWLD+L A ++++++AE+GISYAG+ + A
Sbjct: 181 SSLLNIRVVMELKNHDLNPIAKGRGNKTFNKWLDNLIATIKDRKIAEIGISYAGTSDFAN 240
Query: 239 EMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
+K+ LQ YV+K I+VLETGSIIQTHTGE A+AV++ YE
Sbjct: 241 GLKDKLQAYVEKDIAVLETGSIIQTHTGEGAFAVMVHYE 279
>gi|25010617|ref|NP_735012.1| hypothetical protein gbs0548 [Streptococcus agalactiae NEM316]
gi|77409326|ref|ZP_00786029.1| DegV family protein [Streptococcus agalactiae COH1]
gi|77414021|ref|ZP_00790193.1| DegV family protein [Streptococcus agalactiae 515]
gi|23094971|emb|CAD46192.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159947|gb|EAO71086.1| DegV family protein [Streptococcus agalactiae 515]
gi|77172058|gb|EAO75224.1| DegV family protein [Streptococcus agalactiae COH1]
Length = 278
Score = 362 bits (929), Expect = 1e-98, Method: Composition-based stats.
Identities = 186/279 (66%), Positives = 240/279 (86%), Gaps = 3/279 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLE-EGEFLRLMQSSRNLP 59
M+KIKIVTDSS+TIEPE+ KELDIT+VPLSVM+DG +YSD DL+ +GEFL LM+ S+ LP
Sbjct: 1 MSKIKIVTDSSITIEPELIKELDITVVPLSVMIDGTLYSDNDLKAQGEFLNLMRGSKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANADVTVVDSSFI 118
KTSQPPVGVFA+++++L +GA+ II+IH++H LSGT+EA+RQGA +A ADVTV+DS+F
Sbjct: 61 KTSQPPVGVFAEIYEKLMNEGAEHIIAIHLTHTLSGTIEASRQGANIAGADVTVIDSTFT 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
DQ KFQV EAAKLAKEGADL+ I+A++EEV++K+EL+IG+STLENLVKGGRIGRV+GL+
Sbjct: 121 DQCQKFQVVEAAKLAKEGADLDTILARVEEVRQKSELFIGVSTLENLVKGGRIGRVTGLL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SSLLNI+VIM++ +H+L PIVKGRG KTF KWLD+ + Q +++AE+GISY G ++A
Sbjct: 181 SSLLNIKVIMELTNHELVPIVKGRGLKTFSKWLDNFVESAQTRKIAEIGISYCGKADMAN 240
Query: 239 EMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
KE L + PISVLETGSIIQTHTGE+A+AV++RYE
Sbjct: 241 NFKEKL-AVLGAPISVLETGSIIQTHTGEDAFAVMVRYE 278
>gi|22536681|ref|NP_687532.1| DegV family protein [Streptococcus agalactiae 2603V/R]
gi|76787093|ref|YP_329235.1| DegV family protein [Streptococcus agalactiae A909]
gi|77405324|ref|ZP_00782420.1| DegV family protein [Streptococcus agalactiae H36B]
gi|22533521|gb|AAM99404.1|AE014214_18 DegV family protein [Streptococcus agalactiae 2603V/R]
gi|76562150|gb|ABA44734.1| DegV family protein [Streptococcus agalactiae A909]
gi|77176119|gb|EAO78892.1| DegV family protein [Streptococcus agalactiae H36B]
Length = 278
Score = 360 bits (923), Expect = 6e-98, Method: Composition-based stats.
Identities = 184/279 (65%), Positives = 239/279 (85%), Gaps = 3/279 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLE-EGEFLRLMQSSRNLP 59
M+KIKIVTDSS+TIEPE+ KELDIT+VPLSVM+DG +YSD DL+ +GEFL LM+ S+ LP
Sbjct: 1 MSKIKIVTDSSITIEPELIKELDITVVPLSVMIDGTLYSDNDLKAQGEFLNLMRGSKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANADVTVVDSSFI 118
KTSQPPVGVFA+++++L +G + II+IH++H LSGT+EA+RQGA +A ADVTV+DS+F
Sbjct: 61 KTSQPPVGVFAEIYEKLMNEGVEHIIAIHLTHTLSGTIEASRQGANIAGADVTVIDSTFT 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
DQ KFQV EAAKLAKEGADL+ I+A++EEV++K+EL+IG+STLENLVKGGRIGRV+GL+
Sbjct: 121 DQCQKFQVVEAAKLAKEGADLDTILARVEEVRQKSELFIGVSTLENLVKGGRIGRVTGLL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SSLLNI+VIM++ +H+L PIVKGRG KTF KWLD+ + Q +++AE+GISY G ++A
Sbjct: 181 SSLLNIKVIMELTNHELVPIVKGRGLKTFSKWLDNFVESAQTRKIAEIGISYCGKADMAN 240
Query: 239 EMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
+E L + PISVLETGSIIQTHTGE+A+AV++RYE
Sbjct: 241 NFREKL-AVLGAPISVLETGSIIQTHTGEDAFAVMVRYE 278
>gi|55821219|ref|YP_139661.1| conserved hypothetical protein, degV family [Streptococcus
thermophilus LMG 18311]
gi|55823131|ref|YP_141572.1| conserved hypothetical protein, degV family [Streptococcus
thermophilus CNRZ1066]
gi|55737204|gb|AAV60846.1| conserved hypothetical protein, degV family [Streptococcus
thermophilus LMG 18311]
gi|55739116|gb|AAV62757.1| conserved hypothetical protein, degV family [Streptococcus
thermophilus CNRZ1066]
Length = 278
Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats.
Identities = 187/279 (67%), Positives = 240/279 (86%), Gaps = 3/279 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLP 59
M+KI+IVTDSS+TIEPE+ ++ +ITIVPLSVMVDGV+YSD+DL EEG FL +M++S+ LP
Sbjct: 1 MSKIRIVTDSSITIEPELVEKYNITIVPLSVMVDGVIYSDSDLHEEGRFLEMMKNSKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGA-QIISIHMSHALSGTVEAARQGATLANADVTVVDSSFI 118
KTSQPPVG+FA+ F++L +DGA QII+IH+ H LSGT EA+RQGA L+ ADVTV+DS FI
Sbjct: 61 KTSQPPVGLFAETFEKLIKDGAEQIIAIHLMHTLSGTCEASRQGAILSGADVTVIDSGFI 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
DQ +KFQV EAAKLA+ GA LE+I+A +EEVK K+EL+IG+STLENLVKGGRIGRV+GL+
Sbjct: 121 DQCLKFQVVEAAKLAQAGASLEDIVAHVEEVKSKSELHIGVSTLENLVKGGRIGRVTGLL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SSLLNIRVIM++KD+QL + KGRGAKTF KWLD +++++VAE+G+SYAG+P LA
Sbjct: 181 SSLLNIRVIMELKDYQLNTVAKGRGAKTFTKWLDSYIDAIKDRKVAEIGVSYAGTPVLAH 240
Query: 239 EMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
E+ L+ + PIS+LETGSIIQTHTGE+A+AV++RYE
Sbjct: 241 ELASKLK-VLGAPISILETGSIIQTHTGEDAFAVMVRYE 278
>gi|116627945|ref|YP_820564.1| hypothetical protein STER_1178 [Streptococcus thermophilus LMD-9]
gi|116101222|gb|ABJ66368.1| Uncharacterized protein conserved in bacteria [Streptococcus
thermophilus LMD-9]
Length = 278
Score = 355 bits (910), Expect = 2e-96, Method: Composition-based stats.
Identities = 184/279 (65%), Positives = 239/279 (85%), Gaps = 3/279 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLP 59
M+KI+IVTDSS+TIEPE+ ++ +ITIVPLSVM+DGV+YSD+DL EEG FL +M++S+ LP
Sbjct: 1 MSKIRIVTDSSITIEPELVEKYNITIVPLSVMMDGVIYSDSDLREEGRFLEMMKNSKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGA-QIISIHMSHALSGTVEAARQGATLANADVTVVDSSFI 118
KTSQPPVG+FA+ F++L +DGA QII+IH+ H LSGT EA+RQGA L+ ADVTV+DS FI
Sbjct: 61 KTSQPPVGLFAETFEKLIKDGAEQIIAIHLMHTLSGTCEASRQGAILSGADVTVIDSGFI 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
DQ +KFQV EAAKLA+ GA LE+I+A +EEVK K+EL+IG+STLENLVKGGRIG V+GL+
Sbjct: 121 DQCLKFQVVEAAKLAQAGASLEDIVAHVEEVKSKSELHIGVSTLENLVKGGRIGHVTGLL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SSLLNIRVIM++KD+QL + KGRGAKTF +WLD +++++VAE+G+SYAG+P LA
Sbjct: 181 SSLLNIRVIMELKDYQLNTVAKGRGAKTFTRWLDSYIDAIKDRKVAEIGVSYAGTPVLAH 240
Query: 239 EMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
E+ L+ + PIS+LETGSIIQTHTGE+A+AV++RYE
Sbjct: 241 ELASKLK-VLGAPISILETGSIIQTHTGEDAFAVMVRYE 278
>gi|50914592|ref|YP_060564.1| DegV family protein [Streptococcus pyogenes MGAS10394]
gi|71903827|ref|YP_280630.1| DegV family protein [Streptococcus pyogenes MGAS6180]
gi|71911039|ref|YP_282589.1| degV family protein [Streptococcus pyogenes MGAS5005]
gi|94988850|ref|YP_596951.1| DegV family protein [Streptococcus pyogenes MGAS9429]
gi|94990751|ref|YP_598851.1| Fatty acid-binding protein, DegV family [Streptococcus pyogenes
MGAS10270]
gi|94992741|ref|YP_600840.1| Fatty acid-binding protein, DegV family [Streptococcus pyogenes
MGAS2096]
gi|94994728|ref|YP_602826.1| Fatty acid-binding protein, DegV family [Streptococcus pyogenes
MGAS10750]
gi|50903666|gb|AAT87381.1| DegV family protein [Streptococcus pyogenes MGAS10394]
gi|71802922|gb|AAX72275.1| DegV family protein [Streptococcus pyogenes MGAS6180]
gi|71853821|gb|AAZ51844.1| degV family protein [Streptococcus pyogenes MGAS5005]
gi|94542358|gb|ABF32407.1| DegV family protein [Streptococcus pyogenes MGAS9429]
gi|94544259|gb|ABF34307.1| Fatty acid-binding protein, DegV family [Streptococcus pyogenes
MGAS10270]
gi|94546249|gb|ABF36296.1| Fatty acid-binding protein, DegV family [Streptococcus pyogenes
MGAS2096]
gi|94548236|gb|ABF38282.1| Fatty acid-binding protein, DegV family [Streptococcus pyogenes
MGAS10750]
Length = 283
Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats.
Identities = 176/279 (63%), Positives = 223/279 (79%), Gaps = 2/279 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLP 59
M IKIVTDSS+TIEPE+ K LDIT+VPLSVM+D +YSD DL EEG FL LM++S++LP
Sbjct: 5 MGTIKIVTDSSITIEPELIKALDITVVPLSVMIDSKLYSDNDLKEEGHFLSLMKASKSLP 64
Query: 60 KTSQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFI 118
KTSQPPVG+FA+ ++ L + G I++IH+S ALSGT+EA+RQGA +A A VTV+DS F
Sbjct: 65 KTSQPPVGLFAETYENLVKKGVTDIVAIHLSPALSGTIEASRQGAEIAEAPVTVLDSGFT 124
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
DQAMKFQV EAAK+AK GA L EI+A ++ +K KTELYIG+STLENLVKGGRIGRV+G++
Sbjct: 125 DQAMKFQVVEAAKMAKAGASLNEILAAVQAIKSKTELYIGVSTLENLVKGGRIGRVTGVL 184
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SSLLN++V+M +K+ +L+ +VKGRG KTF KWLD A ++ +AE+ ISYAG LA
Sbjct: 185 SSLLNVKVVMALKNDELKTLVKGRGNKTFTKWLDSYLAKNSHRPIAEIAISYAGEASLAL 244
Query: 239 EMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
+KE + Y ISVLETGSIIQTHTGE A+AV++RYE
Sbjct: 245 TLKERIAAYYNHSISVLETGSIIQTHTGEGAFAVMVRYE 283
>gi|15675397|ref|NP_269571.1| hypothetical protein SPy_1493 [Streptococcus pyogenes M1 GAS]
gi|19746447|ref|NP_607583.1| hypothetical protein spyM18_1511 [Streptococcus pyogenes MGAS8232]
gi|139473482|ref|YP_001128198.1| hypothetical protein SpyM50627 [Streptococcus pyogenes str.
Manfredo]
gi|54040217|sp|P67373|Y1511_STRP8 UPF0230 protein spyM18_1511
gi|54042736|sp|P67372|Y1493_STRP1 UPF0230 protein SPy_1493/M5005_Spy1226
gi|73920506|sp|Q5XB32|Y1246_STRP6 UPF0230 protein M6_Spy1246
gi|13622583|gb|AAK34292.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|19748649|gb|AAL98082.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|134271729|emb|CAM29962.1| conserved hypothetical protein [Streptococcus pyogenes str.
Manfredo]
Length = 279
Score = 328 bits (840), Expect = 3e-88, Method: Composition-based stats.
Identities = 176/279 (63%), Positives = 223/279 (79%), Gaps = 2/279 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLP 59
M IKIVTDSS+TIEPE+ K LDIT+VPLSVM+D +YSD DL EEG FL LM++S++LP
Sbjct: 1 MGTIKIVTDSSITIEPELIKALDITVVPLSVMIDSKLYSDNDLKEEGHFLSLMKASKSLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFI 118
KTSQPPVG+FA+ ++ L + G I++IH+S ALSGT+EA+RQGA +A A VTV+DS F
Sbjct: 61 KTSQPPVGLFAETYENLVKKGVTDIVAIHLSPALSGTIEASRQGAEIAEAPVTVLDSGFT 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
DQAMKFQV EAAK+AK GA L EI+A ++ +K KTELYIG+STLENLVKGGRIGRV+G++
Sbjct: 121 DQAMKFQVVEAAKMAKAGASLNEILAAVQAIKSKTELYIGVSTLENLVKGGRIGRVTGVL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SSLLN++V+M +K+ +L+ +VKGRG KTF KWLD A ++ +AE+ ISYAG LA
Sbjct: 181 SSLLNVKVVMALKNDELKTLVKGRGNKTFTKWLDSYLAKNSHRPIAEIAISYAGEASLAL 240
Query: 239 EMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
+KE + Y ISVLETGSIIQTHTGE A+AV++RYE
Sbjct: 241 TLKERIAAYYNHSISVLETGSIIQTHTGEGAFAVMVRYE 279
>gi|21910685|ref|NP_664953.1| hypothetical protein SpyM3_1149 [Streptococcus pyogenes MGAS315]
gi|28895625|ref|NP_801975.1| hypothetical protein SPs0713 [Streptococcus pyogenes SSI-1]
gi|29840862|sp|Q8K6T3|Y1149_STRP3 UPF0230 protein SpyM3_1149/SPs0713
gi|21904888|gb|AAM79756.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28810874|dbj|BAC63808.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 279
Score = 326 bits (836), Expect = 7e-88, Method: Composition-based stats.
Identities = 175/279 (62%), Positives = 222/279 (79%), Gaps = 2/279 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLP 59
M IKIVTDSS+TIEPE+ K LDIT+VPLSVM+D +YSD DL EEG FL LM++S++LP
Sbjct: 1 MGTIKIVTDSSITIEPELIKALDITVVPLSVMIDSKLYSDNDLKEEGHFLSLMKASKSLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFI 118
KTSQPPVG+FA+ ++ L + G I++IH+S ALSGT+EA+RQGA +A VTV+DS F
Sbjct: 61 KTSQPPVGLFAETYENLVKKGVTDIVAIHLSPALSGTIEASRQGAEIAETPVTVLDSGFT 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
DQAMKFQV EAAK+AK GA L EI+A ++ +K KTELYIG+STLENLVKGGRIGRV+G++
Sbjct: 121 DQAMKFQVVEAAKMAKAGASLNEILAAVQAIKSKTELYIGVSTLENLVKGGRIGRVTGVL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SSLLN++V+M +K+ +L+ +VKGRG KTF KWLD A ++ +AE+ ISYAG LA
Sbjct: 181 SSLLNVKVVMALKNDELKTLVKGRGNKTFTKWLDSYLAKNSHRPIAEIAISYAGEASLAL 240
Query: 239 EMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
+KE + Y ISVLETGSIIQTHTGE A+AV++RYE
Sbjct: 241 TLKERIAAYYNHSISVLETGSIIQTHTGEGAFAVMVRYE 279
>gi|116511324|ref|YP_808540.1| hypothetical protein LACR_0521 [Lactococcus lactis subsp. cremoris
SK11]
gi|116106978|gb|ABJ72118.1| hypothetical protein LACR_0521 [Lactococcus lactis subsp. cremoris
SK11]
Length = 278
Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats.
Identities = 163/276 (59%), Positives = 220/276 (79%), Gaps = 2/276 (0%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
IKIVTDSS+TIEPE+A+ELDITIVPLSV +DG +YSD DL+ +F+ M +S+NLPKTSQ
Sbjct: 3 IKIVTDSSITIEPELARELDITIVPLSVTIDGTMYSDDDLKFEDFMVKMAASKNLPKTSQ 62
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAMK 123
PPVGVFA+V++++A + +IISIH++ ALSGTVEAARQG L+ +VTV+DS F DQA K
Sbjct: 63 PPVGVFAEVYEKIAAEDDEIISIHLTEALSGTVEAARQGGMLSGRNVTVIDSDFTDQAQK 122
Query: 124 FQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLLN 183
FQV EAA+LAK GA EEI+ KI+ ++E TEL+IG STLENLVKGGR+ R++GL SLL
Sbjct: 123 FQVVEAARLAKTGATKEEILEKIKYIRENTELFIGFSTLENLVKGGRVSRMTGLFGSLLQ 182
Query: 184 IRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN--KQVAELGISYAGSPELAQEMK 241
+RVI +KD +L +++GRG+KTF KWL++LS + + +++ E+GIS+A E +Q+ K
Sbjct: 183 VRVIGTLKDRELNTLLRGRGSKTFYKWLEELSDTISSSGRKIREIGISHAQGLEFSQKAK 242
Query: 242 ESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
+ LQ +V+KPIS+L+T + I THTG AWA++I YE
Sbjct: 243 DVLQKFVEKPISILDTNTTIATHTGPGAWAIMIDYE 278
>gi|125623359|ref|YP_001031842.1| hypothetical protein llmg_0492 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124492167|emb|CAL97096.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 278
Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats.
Identities = 163/276 (59%), Positives = 220/276 (79%), Gaps = 2/276 (0%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
IKIVTDSS+TIEPE+A+ELDITIVPLSV +DG +YSD DL+ +F+ M +S+NLPKTSQ
Sbjct: 3 IKIVTDSSITIEPELARELDITIVPLSVTIDGTMYSDDDLKFEDFMVKMAASKNLPKTSQ 62
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAMK 123
PPVGVFA+V++++A + +IISIH++ ALSGTVEAARQG L+ +VTV+DS F DQA K
Sbjct: 63 PPVGVFAEVYEKIAAEDDEIISIHLTEALSGTVEAARQGGMLSGRNVTVIDSDFTDQAQK 122
Query: 124 FQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLLN 183
FQV EAA+LAK GA EEI+ KI+ ++E TEL+IG STLENLVKGGR+ R++GL SLL
Sbjct: 123 FQVVEAARLAKTGATKEEILEKIKYIRENTELFIGFSTLENLVKGGRVSRMTGLFGSLLQ 182
Query: 184 IRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN--KQVAELGISYAGSPELAQEMK 241
+RVI +KD +L +++GRG+KTF KWL++LS + + +++ E+GIS+A E +Q+ K
Sbjct: 183 VRVIGTLKDRELNTLLRGRGSKTFYKWLEELSDTISSSRRKIREIGISHAQGLEFSQKAK 242
Query: 242 ESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
+ LQ +V+KPIS+L+T + I THTG AWA++I YE
Sbjct: 243 DVLQKFVEKPISILDTNTTIATHTGPGAWAIMIDYE 278
>gi|30179870|sp|Q9CI68|YEJH_LACLA UPF0230 protein yejH
Length = 278
Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats.
Identities = 163/276 (59%), Positives = 220/276 (79%), Gaps = 2/276 (0%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
IKIVTDSS+TIEP +A+ELDITIVPLSV +DG +YSD DL+ +F+ M +S+NLPKTSQ
Sbjct: 3 IKIVTDSSITIEPGIARELDITIVPLSVTIDGTMYSDDDLKFEDFMVKMAASKNLPKTSQ 62
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAMK 123
PPVGVFA+V++++A + +IISIH++ ALSGTVEAARQG L+ +VTV+DS F DQA K
Sbjct: 63 PPVGVFAEVYEKIAAEDDEIISIHLTEALSGTVEAARQGGMLSGRNVTVIDSDFTDQAQK 122
Query: 124 FQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLLN 183
FQV EAA+LAK GA EEI+ KI+ ++E TEL+IG STLENLVKGGR+ R++GL SLL
Sbjct: 123 FQVVEAARLAKAGASKEEILEKIKYIRENTELFIGFSTLENLVKGGRVSRMTGLFGSLLQ 182
Query: 184 IRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN--KQVAELGISYAGSPELAQEMK 241
+RVI +KD +L +++GRG+KTF KWL++LS ++ + +++ E+GIS+A E +Q+ K
Sbjct: 183 VRVIGTLKDRELNTLLRGRGSKTFYKWLEELSDSISSSGRKIREIGISHAQGLEFSQKAK 242
Query: 242 ESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
E LQ +V+KPIS+L+T + I THTG AWA++I YE
Sbjct: 243 EVLQKFVEKPISILDTNTTIATHTGPGAWAIMIDYE 278
>gi|15672480|ref|NP_266654.1| hypothetical protein L98583 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723380|gb|AAK04596.1|AE006285_4 conserved hypothetical protein [Lactococcus lactis subsp. lactis
Il1403]
Length = 285
Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats.
Identities = 163/276 (59%), Positives = 220/276 (79%), Gaps = 2/276 (0%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
IKIVTDSS+TIEP +A+ELDITIVPLSV +DG +YSD DL+ +F+ M +S+NLPKTSQ
Sbjct: 10 IKIVTDSSITIEPGIARELDITIVPLSVTIDGTMYSDDDLKFEDFMVKMAASKNLPKTSQ 69
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAMK 123
PPVGVFA+V++++A + +IISIH++ ALSGTVEAARQG L+ +VTV+DS F DQA K
Sbjct: 70 PPVGVFAEVYEKIAAEDDEIISIHLTEALSGTVEAARQGGMLSGRNVTVIDSDFTDQAQK 129
Query: 124 FQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLLN 183
FQV EAA+LAK GA EEI+ KI+ ++E TEL+IG STLENLVKGGR+ R++GL SLL
Sbjct: 130 FQVVEAARLAKAGASKEEILEKIKYIRENTELFIGFSTLENLVKGGRVSRMTGLFGSLLQ 189
Query: 184 IRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN--KQVAELGISYAGSPELAQEMK 241
+RVI +KD +L +++GRG+KTF KWL++LS ++ + +++ E+GIS+A E +Q+ K
Sbjct: 190 VRVIGTLKDRELNTLLRGRGSKTFYKWLEELSDSISSSGRKIREIGISHAQGLEFSQKAK 249
Query: 242 ESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
E LQ +V+KPIS+L+T + I THTG AWA++I YE
Sbjct: 250 EVLQKFVEKPISILDTNTTIATHTGPGAWAIMIDYE 285
>gi|93279913|pdb|2G7Z|A Chain A, Conserved Hypothetical Protein From Streptococcus Pyogenes
M1 Gas Discloses Long-Fatty Acid Binding Function
gi|93279914|pdb|2G7Z|B Chain B, Conserved Hypothetical Protein From Streptococcus Pyogenes
M1 Gas Discloses Long-Fatty Acid Binding Function
Length = 282
Score = 303 bits (776), Expect = 8e-81, Method: Composition-based stats.
Identities = 171/276 (61%), Positives = 216/276 (78%), Gaps = 2/276 (0%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLPKTS 62
IKIVTDSS+TIEPE+ K LDIT+VPLSV +D +YSD DL EEG FL L ++S++LPKTS
Sbjct: 7 IKIVTDSSITIEPELIKALDITVVPLSVXIDSKLYSDNDLKEEGHFLSLXKASKSLPKTS 66
Query: 63 QPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQA 121
QPPVG+FA+ ++ L + G I++IH+S ALSGT+EA+RQGA +A A VTV+DS F DQA
Sbjct: 67 QPPVGLFAETYENLVKKGVTDIVAIHLSPALSGTIEASRQGAEIAEAPVTVLDSGFTDQA 126
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
KFQV EAAK AK GA L EI+A ++ +K KTELYIG+STLENLVKGGRIGRV+G++SSL
Sbjct: 127 XKFQVVEAAKXAKAGASLNEILAAVQAIKSKTELYIGVSTLENLVKGGRIGRVTGVLSSL 186
Query: 182 LNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEMK 241
LN++V+ +K+ +L+ +VKGRG KTF KWLD A ++ +AE+ ISYAG LA +K
Sbjct: 187 LNVKVVXALKNDELKTLVKGRGNKTFTKWLDSYLAKNSHRPIAEIAISYAGEASLALTLK 246
Query: 242 ESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
E + Y ISVLETGSIIQTHTGE A+AV +RYE
Sbjct: 247 ERIAAYYNHSISVLETGSIIQTHTGEGAFAVXVRYE 282
>gi|56807450|ref|ZP_00365405.1| COG1307: Uncharacterized protein conserved in bacteria
[Streptococcus pyogenes M49 591]
Length = 256
Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats.
Identities = 158/256 (61%), Positives = 204/256 (79%), Gaps = 2/256 (0%)
Query: 24 ITIVPLSVMVDGVVYSDADL-EEGEFLRLMQSSRNLPKTSQPPVGVFADVFDRLAEDG-A 81
+T+VPLSVM+D +YSD DL EEG FL LM++S++LPKTSQPPVG+FA+ ++ L + G
Sbjct: 1 MTVVPLSVMIDSKLYSDNDLKEEGHFLSLMKASKSLPKTSQPPVGLFAETYENLVKKGVT 60
Query: 82 QIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAMKFQVTEAAKLAKEGADLEE 141
I++IH+S ALSGT+EA+RQGA +A A VTV+DS F DQAMKFQV EAAK+AK GA L E
Sbjct: 61 DIVAIHLSPALSGTIEASRQGAEIAEAPVTVLDSGFTDQAMKFQVVEAAKMAKAGASLNE 120
Query: 142 IIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLLNIRVIMQMKDHQLEPIVKG 201
I+A ++ +K KTELYIG+STLENLVKGGRIGRV+G++SSLLN++V+M +K+ +L+ +VKG
Sbjct: 121 ILAAVQAIKSKTELYIGVSTLENLVKGGRIGRVTGVLSSLLNVKVVMALKNDELKTLVKG 180
Query: 202 RGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEMKESLQPYVKKPISVLETGSII 261
RG KTF KWLD A ++ +AE+ ISYAG LA +KE + Y ISVLETGSII
Sbjct: 181 RGNKTFTKWLDSYLAKNSHRPIAEIAISYAGEASLALTLKERIAAYYNHSISVLETGSII 240
Query: 262 QTHTGENAWAVLIRYE 277
QTHTGE A+AV++RYE
Sbjct: 241 QTHTGEGAFAVMVRYE 256
>gi|29376238|ref|NP_815392.1| DegV family protein, putative [Enterococcus faecalis V583]
gi|29343701|gb|AAO81462.1| DegV family protein, putative [Enterococcus faecalis V583]
Length = 280
Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats.
Identities = 149/276 (53%), Positives = 205/276 (74%), Gaps = 3/276 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGE-FLRLMQSSRNLP 59
MT +KIVTDSS T+E + EL+I ++PLS+MVDGVVY D D GE F+ +M +++ LP
Sbjct: 1 MTNVKIVTDSSCTMEKSLRDELNIHMMPLSIMVDGVVYPDDDHLPGEKFMDMMANAKALP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPP+G F +++DRL EDG+++ISIHM+ LSGTVEAARQ + L+++ VTV+DS F D
Sbjct: 61 KTSQPPIGEFVELYDRLGEDGSEVISIHMTKGLSGTVEAARQASNLSSSKVTVIDSDFTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
Q + FQV +AAKLA+ GA + EI+A+IE VK+ T+LYIG+STL+NLVKGGRI R +GL+S
Sbjct: 121 QGLSFQVIQAAKLAQAGAGVPEILAEIERVKQNTKLYIGISTLDNLVKGGRISRTTGLLS 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN-KQVAELGISYAGSPELAQ 238
++ N++V+M ++ +L P+ KGRG KTF KW D+L + L V ++GIS+A ELA
Sbjct: 181 NIFNMKVVMDFENTELIPVAKGRGVKTFNKWFDELKSELSKIPNVRQIGISHADGLELAN 240
Query: 239 EMKESLQPYVKK-PISVLETGSIIQTHTGENAWAVL 273
KE LQ K I VL T +I THTG+NA+A++
Sbjct: 241 GFKEGLQAIFKDMDIPVLHTNPVIATHTGKNAFAIM 276
>gi|69246748|ref|ZP_00604096.1| DegV [Enterococcus faecium DO]
gi|68195102|gb|EAN09562.1| DegV [Enterococcus faecium DO]
Length = 280
Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats.
Identities = 145/276 (52%), Positives = 199/276 (72%), Gaps = 3/276 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGE-FLRLMQSSRNLP 59
MT +KIVTDSS T+E V L I ++PLS+M+DG VY D D +GE F+ +M ++NLP
Sbjct: 1 MTNVKIVTDSSCTMEKNVRDALGIRVMPLSIMIDGTVYPDDDQLDGERFMEMMAKAKNLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPP+G F ++D L EDG+++ISIHM+ LSGTVEAARQ + L VTV+DS D
Sbjct: 61 KTSQPPIGEFISMYDELGEDGSEVISIHMTKGLSGTVEAARQASNLTKTKVTVIDSDTTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
Q + FQV AA+LAKEG +E+I+ ++++V++ T+LYIG+STL+NLVKGGRI R +GL+S
Sbjct: 121 QGLSFQVIRAAELAKEGKTVEKILEEVKKVQDNTKLYIGISTLDNLVKGGRISRTTGLLS 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN-KQVAELGISYAGSPELAQ 238
S+LNIRV+M +L P+ KGRG KTF KW ++L L+ V ++GIS+A + ELAQ
Sbjct: 181 SVLNIRVVMNFAHSELIPVTKGRGKKTFDKWFNNLKNELKELPNVRQIGISHADAKELAQ 240
Query: 239 EMKESLQP-YVKKPISVLETGSIIQTHTGENAWAVL 273
E KE LQ + I VL T +I THTG++A+A++
Sbjct: 241 EFKEGLQELFPDMHIPVLHTNPVIATHTGKDAFAIM 276
>gi|77412378|ref|ZP_00788688.1| DegV family protein [Streptococcus agalactiae CJB111]
gi|77161566|gb|EAO72567.1| DegV family protein [Streptococcus agalactiae CJB111]
Length = 205
Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats.
Identities = 139/202 (68%), Positives = 181/202 (89%), Gaps = 2/202 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLE-EGEFLRLMQSSRNLP 59
M+KIKIVTDSS+TIEPE+ KELDIT+VPLSVM+DG +YSD DL+ +GEFL LM+ S+ LP
Sbjct: 1 MSKIKIVTDSSITIEPELIKELDITVVPLSVMIDGTLYSDNDLKAQGEFLNLMRGSKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANADVTVVDSSFI 118
KTSQPPVGVFA+++++L +G + II+IH++H LSGT+EA+RQGA +A ADVTV+DS+F
Sbjct: 61 KTSQPPVGVFAEIYEKLMNEGVEHIIAIHLTHTLSGTIEASRQGANIAGADVTVIDSTFT 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
DQ KFQV EAAKLAKEGADL+ I+A++EEV++K+EL+IG+STLENLVKGGRIGRV+GL+
Sbjct: 121 DQCQKFQVVEAAKLAKEGADLDTILARVEEVRQKSELFIGVSTLENLVKGGRIGRVTGLL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVK 200
SSLLNI+VIM++ +H+L PI+K
Sbjct: 181 SSLLNIKVIMELTNHELVPILK 202
>gi|76799718|ref|ZP_00781814.1| DegV family protein [Streptococcus agalactiae 18RS21]
gi|76584929|gb|EAO61591.1| DegV family protein [Streptococcus agalactiae 18RS21]
Length = 181
Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats.
Identities = 118/182 (64%), Positives = 154/182 (84%), Gaps = 1/182 (0%)
Query: 96 VEAARQGATLANADVTVVDSSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTEL 155
++A+RQGA +A ADVTV+DS+F DQ KFQV EAAKLAKEGADL+ I+A++EEV++K+EL
Sbjct: 1 MKASRQGANIAGADVTVIDSTFTDQCQKFQVVEAAKLAKEGADLDTILARVEEVRQKSEL 60
Query: 156 YIGLSTLENLVKGGRIGRVSGLISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLS 215
+IG+STLENLVKGGRIGRV+GL+SSLLNI+VIM++ +H+L PIVKGRG KTF KWLD+
Sbjct: 61 FIGVSTLENLVKGGRIGRVTGLLSSLLNIKVIMELTNHELVPIVKGRGLKTFSKWLDNFV 120
Query: 216 ANLQNKQVAELGISYAGSPELAQEMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIR 275
+ Q +++AE+GISY G ++A +E L + PISVLETGSIIQTHTGE+A+AV++R
Sbjct: 121 ESAQTRKIAEIGISYCGKADMANNFREKL-AVLGAPISVLETGSIIQTHTGEDAFAVMVR 179
Query: 276 YE 277
YE
Sbjct: 180 YE 181
>gi|116494876|ref|YP_806610.1| hypothetical protein LSEI_1390 [Lactobacillus casei ATCC 334]
gi|116105026|gb|ABJ70168.1| hypothetical protein LSEI_1390 [Lactobacillus casei ATCC 334]
Length = 280
Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats.
Identities = 126/275 (45%), Positives = 190/275 (69%), Gaps = 3/275 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLP 59
M IKIVTDSSV + PE + +IT+VPL++M+D VY D + +F+ M +++NLP
Sbjct: 1 MANIKIVTDSSVQLTPEEISQHNITVVPLTIMIDNTVYIDGKTITRDDFMDEMAAAQNLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP VG FADVFD+L DG+++++IHM+ +SGTV ++RQ A +A VTV+DS F D
Sbjct: 61 KTSQPAVGTFADVFDKLTADGSEVLAIHMTETISGTVNSSRQAAQIAKGKVTVIDSQFTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+AM FQV AA++A+ G D++ I+ K+E+V++ T L +G++ L+NLVKGGR+ RVSGLIS
Sbjct: 121 RAMAFQVLVAAEMAEAGKDMKTILDKLEQVRDNTTLVLGVTNLDNLVKGGRLSRVSGLIS 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN-KQVAELGISYAGSPELAQ 238
S LNI+VI+Q+++ +L+ + KGRG KT ++ + A + + +GIS AG+ EL +
Sbjct: 181 SFLNIKVILQLQNGELKALRKGRGMKTINNFIAETIAKMAKLSNIKSVGISTAGAKELGE 240
Query: 239 EMKESLQPYVKK-PISVLETGSIIQTHTGENAWAV 272
++ + + PI V T +I THTG A+A+
Sbjct: 241 DIGRRIAEVLPSVPILVRPTDPVIATHTGPGAFAI 275
>gi|116492829|ref|YP_804564.1| hypothetical protein PEPE_1066 [Pediococcus pentosaceus ATCC 25745]
gi|116102979|gb|ABJ68122.1| hypothetical protein PEPE_1066 [Pediococcus pentosaceus ATCC 25745]
Length = 281
Score = 231 bits (588), Expect = 5e-59, Method: Composition-based stats.
Identities = 129/280 (46%), Positives = 191/280 (68%), Gaps = 3/280 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLP 59
M++IKIVTDSS + E K+ DI+IVPLSVM+D VY + + + EF+ M SS++LP
Sbjct: 1 MSQIKIVTDSSCGVTDEEIKKYDISIVPLSVMIDDTVYVEGETITNEEFIHKMASSKSLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPP+G F ++FD+L EDG+QIIS +M A+SGTV A Q A L+ ADVTV+DS F D
Sbjct: 61 KTSQPPLGKFVEMFDKLGEDGSQIISFNMLEAISGTVHTAEQAAQLSKADVTVIDSQFTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+A+ FQV EAAK+AKEGA +EII + E +++ T+LY+ + LENLVKGGR+ ++ G++
Sbjct: 121 RALAFQVLEAAKMAKEGASKDEIIQRAEYIRDHTKLYLSVVNLENLVKGGRLSKIGGMLG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNK-QVAELGISYAGSPELAQ 238
LLNI++++++K+ +L+ K RG K KK D+ +Q ++ +GIS+ + ++ +
Sbjct: 181 GLLNIKLLLEVKNGKLDVAGKVRGMKAMKKLWSDIYTEMQGSGKIKGVGISHVEAFDMVE 240
Query: 239 EMKESLQPYVK-KPISVLETGSIIQTHTGENAWAVLIRYE 277
+MK+ + + I V ET II THTG A+ +L E
Sbjct: 241 DMKKHVGEFFPVNDIVVRETVPIIATHTGMGAFCILYYSE 280
>gi|81428610|ref|YP_395610.1| Hypothetical protein, DegV family [Lactobacillus sakei subsp. sakei
23K]
gi|78610252|emb|CAI55301.1| Hypothetical protein, DegV family [Lactobacillus sakei subsp. sakei
23K]
Length = 286
Score = 227 bits (578), Expect = 7e-58, Method: Composition-based stats.
Identities = 128/280 (45%), Positives = 192/280 (68%), Gaps = 3/280 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLP 59
+ IKIVTDSS+ + PE K+ IT++PL++M+D VY D + + +F+ M S+ LP
Sbjct: 6 VANIKIVTDSSIQLTPEEIKQHHITVIPLTIMIDNTVYIDGETITRDQFMTEMASASALP 65
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F + +++LA DG+QI+SIHM A+SGTV+ ARQ +A ADVTV+DS F D
Sbjct: 66 KTSQPAIGNFIETYEQLAADGSQILSIHMLRAISGTVDTARQAGEMAKADVTVIDSDFTD 125
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+AM FQV +AA++ + G LE+ +A I+ V + T+LY+G++ L NLVKGGR+ +G+IS
Sbjct: 126 RAMAFQVLKAAEVIEAGGSLEDALAAIQAVHDNTKLYMGVTDLTNLVKGGRLSHAAGVIS 185
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN-KQVAELGISYAGSPELAQ 238
SLLNI+VI+++ D +L+ + KGRG KT K++D++ +L+ K V +GIS+A EL++
Sbjct: 186 SLLNIKVILEVADSELKVLRKGRGMKTITKFIDEMDDDLRKLKNVKAIGISHADGLELSE 245
Query: 239 EMKESLQ-PYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
++K LQ + I V T +I TH G A+AV+ E
Sbjct: 246 KIKAQLQAAFPAIEILVRTTDPVIATHAGAGAFAVMYYTE 285
>gi|28378523|ref|NP_785415.1| DegV family protein [Lactobacillus plantarum WCFS1]
gi|28271359|emb|CAD64264.1| DegV family protein [Lactobacillus plantarum WCFS1]
Length = 283
Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats.
Identities = 124/275 (45%), Positives = 177/275 (64%), Gaps = 3/275 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLP 59
MTKIKIVTDSS + K+ DIT++PL+VM+DG +Y D + EF+ M ++++LP
Sbjct: 1 MTKIKIVTDSSANLTDAEVKKYDITVIPLTVMIDGTIYVEDETITREEFIDKMATAKSLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F + FD+L DGA +I I+M A+SGTV A Q A++ DVTV+D+ D
Sbjct: 61 KTSQPALGTFIETFDKLGADGASVICINMLEAISGTVHTAEQAASITKTDVTVIDARTTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+AM FQV AAKLA+ GAD + +I +I + T+L++G+ TL NLV GGRI R++G IS
Sbjct: 121 RAMAFQVLTAAKLAQSGADKQAVIDQIHATQAHTKLFMGVMTLNNLVAGGRISRLTGAIS 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDD-LSANLQNKQVAELGISYAGSPELAQ 238
+LLN+++ +++ D L+ +KGRG K K+ D L + VAE+ IS+ G+ E +
Sbjct: 181 TLLNVKIALEVDDGTLDVKMKGRGVKAINKFFDKVLDDIIATPNVAEVAISHVGATERVE 240
Query: 239 EMKESLQPYVKK-PISVLETGSIIQTHTGENAWAV 272
E + LQ + ISV T II TH G A+AV
Sbjct: 241 EYRARLQAALPSLKISVQPTVPIIATHGGPGAFAV 275
>gi|89100593|ref|ZP_01173452.1| degV family protein [Bacillus sp. NRRL B-14911]
gi|89084697|gb|EAR63839.1| degV family protein [Bacillus sp. NRRL B-14911]
Length = 285
Score = 214 bits (544), Expect = 6e-54, Method: Composition-based stats.
Identities = 121/280 (43%), Positives = 180/280 (64%), Gaps = 3/280 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
+ K+KIVTDS+ + +A EL I +VPLS+ +DG Y D D+ EF++ M++S LP
Sbjct: 6 LAKVKIVTDSTADLPAALAAELGIEVVPLSITIDGETYLDRIDITPSEFMKKMKTSAELP 65
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
K+SQPP G F +++DR +G +++SIHM+ +SGTV++A A +++A VTV+DS FI
Sbjct: 66 KSSQPPPGKFVELYDRFGAEGYEVLSIHMTGGMSGTVQSAESAAKMSSAKVTVIDSRFIS 125
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+A+ FQVTEAAK+A EG LEEII KI +++EKT LY+ + TLENLVKGGRIG+ LI
Sbjct: 126 KALSFQVTEAAKMAGEGLGLEEIIDKIAKIREKTHLYVVVDTLENLVKGGRIGKGKALIG 185
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWL-DDLSANLQNKQVAELGISYAGSPELAQ 238
SLLNI+ I ++ P+ K R K+L + +++ + + +GI +A +LA
Sbjct: 186 SLLNIKPIASLEGGVYTPVTKVRSYTQVAKYLVKQFAEDVKGRTIKGVGICHAEGLDLAM 245
Query: 239 EMKESLQPYVK-KPISVLETGSIIQTHTGENAWAVLIRYE 277
++KE L + + + ET II THTG A + Y+
Sbjct: 246 KVKEGLVELTGYENVEIEETTPIISTHTGPGAIGFMYYYD 285
>gi|116333434|ref|YP_794961.1| hypothetical protein LVIS_0787 [Lactobacillus brevis ATCC 367]
gi|116098781|gb|ABJ63930.1| hypothetical protein LVIS_0787 [Lactobacillus brevis ATCC 367]
Length = 283
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 122/276 (44%), Positives = 183/276 (66%), Gaps = 3/276 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLP 59
M KIKIVTDSS + + + DITI+PL+VM+D +Y + + + EF+ M++++ LP
Sbjct: 1 MAKIKIVTDSSAGLTDQQIADYDITIIPLTVMIDDTIYVERESITNKEFIEKMKTAKTLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPP+G F + FD+L EDG+ +I +M A+SGTV A Q A L+ DVTVVDS D
Sbjct: 61 KTSQPPLGSFVETFDKLGEDGSSVICFNMLAAISGTVHTAEQAAQLSKTDVTVVDSQTTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
QA+ FQV EAAKLA EGAD I+A+ V++ T+L++G+ TLEN++KGGR+ R +G+++
Sbjct: 121 QALAFQVVEAAKLAAEGADKAAILARAAAVRDHTKLFMGVVTLENILKGGRLSRAAGMLT 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANL-QNKQVAELGISYAGSPELAQ 238
SLLNI++++++ +L+ KGRG KT ++ D + L Q + +GIS+ + E
Sbjct: 181 SLLNIKIVLEVTGGELKIRAKGRGMKTIDRYFDKVYEQLKQTPDIMAIGISHVEAFESVD 240
Query: 239 EMKESLQPYVK-KPISVLETGSIIQTHTGENAWAVL 273
++K+ L V K + V ET II TH G A+A++
Sbjct: 241 KIKQHLSEVVPGKDVLVRETVPIIATHGGPGAFALM 276
>gi|126650229|ref|ZP_01722457.1| DegV family protein [Bacillus sp. B14905]
gi|126592879|gb|EAZ86861.1| DegV family protein [Bacillus sp. B14905]
Length = 303
Score = 207 bits (526), Expect = 7e-52, Method: Composition-based stats.
Identities = 117/270 (43%), Positives = 169/270 (62%), Gaps = 3/270 (1%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
+I IVTDS+ + E + I IVPL++ +DG Y D DLE FL LM++++NLPK+
Sbjct: 26 RIHIVTDSTCDLTKEEVAQHGIHIVPLTIQIDGETYIDGVDLEPQPFLGLMKNAKNLPKS 85
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQA 121
SQP G F +++D L +DG QI+SIHM+ +SGTVE+ARQ A + +ADVTV+DS FI
Sbjct: 86 SQPAPGKFKELYDELGKDGDQILSIHMTGGMSGTVESARQAAQMTDADVTVIDSRFIAIG 145
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
+ Q+ EA K+ GA +EEI+A++++V+ T LY+ + TLENL+KGGRIG+ +G I SL
Sbjct: 146 LAIQLREAIKMRDAGATVEEIVARLDKVRANTHLYVIVDTLENLIKGGRIGKGTGFIGSL 205
Query: 182 LNIRVIMQMKDHQLEPIVKGRGAKTFKKWL-DDLSANLQNKQVAELGISYA-GSPELAQE 239
LNI+VI ++ P+ K R K +L A+ K V +GIS+A G +
Sbjct: 206 LNIKVIANLEGGVYNPVSKVRSHKQVVNYLFKQFQADTAGKTVKAVGISHADGLITMGNP 265
Query: 240 MKESLQPYVKKPISVLETGSIIQTHTGENA 269
+KE ++ + + T II THTG A
Sbjct: 266 LKELIEGTGFNDVEIAFTSPIISTHTGPGA 295
>gi|92089911|ref|ZP_01274832.1| DegV [Lactobacillus reuteri 100-23]
gi|91803318|gb|EAS88196.1| DegV [Lactobacillus reuteri 100-23]
Length = 280
Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats.
Identities = 118/280 (42%), Positives = 179/280 (63%), Gaps = 3/280 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLP 59
M KIKIV DSS + E K+ DITI+PLSVM+DG VY + + + +F +M+++++LP
Sbjct: 1 MAKIKIVCDSSAGLTDEEIKKYDITIIPLSVMIDGTVYVERETITNEQFPEMMKNAKSLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPP+G F D FD+L EDG++++ + M ++SGTV AA Q A + VTV DS D
Sbjct: 61 KTSQPPIGKFVDAFDKLGEDGSEVLCVTMMESISGTVHAAEQAAGMTKTKVTVYDSQSTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
Q M F++ EAA++ + G +E+ IAK++E+ K+ELY+ + L+NLV GGRI + +G IS
Sbjct: 121 QVMGFEILEAAQVIEAGGSVEDAIAKMKEILSKSELYLAIDNLDNLVAGGRISKFAGAIS 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTF-KKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
+LLNI+V++ + D Q+ KGRG K+ K+W L + +V +GIS+ + + +
Sbjct: 181 NLLNIKVMLHVYDGQIHIESKGRGIKSMHKEWDKILDEMARGPKVKRIGISHVDAGKEVE 240
Query: 239 EMKESLQP-YVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
+ L+ Y + ++V ET II THTG A +L E
Sbjct: 241 RLLAKLKELYPEIEVTVRETVPIIATHTGMGACCLLYYTE 280
>gi|133930473|gb|ABO43808.1| DegV [Lactobacillus reuteri]
Length = 280
Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats.
Identities = 119/280 (42%), Positives = 179/280 (63%), Gaps = 3/280 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLP 59
M KIKIV DSS + E K+ DITI+PLSVM+DG VY + + + +F +M+++++LP
Sbjct: 1 MAKIKIVCDSSAGLTDEEIKKYDITIIPLSVMIDGTVYVERETITNEQFPEMMKNAKSLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPP+G F D FD+L EDG++++ + M ++SGTV AA Q A + VTV DS D
Sbjct: 61 KTSQPPIGKFVDAFDKLGEDGSEVLCVTMMESISGTVHAAEQAAGMTKTKVTVYDSQSTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
Q M F++ EAA++ + G +E+ IAK++EV K+ELY+ + L+NLV GGRI + +G IS
Sbjct: 121 QVMGFEIIEAAQVIEAGGSVEDAIAKMKEVLSKSELYLAIDNLDNLVAGGRISKFAGAIS 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTF-KKWLDDLSANLQNKQVAELGISYA-GSPELA 237
+LLNI+V++ + D Q+ KGRG K+ K+W L + +V +GIS+ E+
Sbjct: 181 NLLNIKVMLHVYDGQIHIESKGRGIKSMHKEWDKILDEMARGPKVKRIGISHVDAGKEVE 240
Query: 238 QEMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
+ + + + Y + ++V ET II THTG A +L E
Sbjct: 241 RLLAKIKEFYPEIEVTVRETVPIIATHTGMGACCLLYYTE 280
>gi|116629565|ref|YP_814737.1| hypothetical protein LGAS_0910 [Lactobacillus gasseri ATCC 33323]
gi|116095147|gb|ABJ60299.1| hypothetical protein LGAS_0910 [Lactobacillus gasseri ATCC 33323]
Length = 285
Score = 206 bits (523), Expect = 1e-51, Method: Composition-based stats.
Identities = 125/286 (43%), Positives = 181/286 (63%), Gaps = 12/286 (4%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KIK+VTDSSV + PE + DIT+VPL++ +DG Y+D D+ EF++ M +S+ LP
Sbjct: 1 MAKIKVVTDSSVQLTPEEIDKYDITVVPLTITIDGQTYTDGVDISREEFVKKMDTSKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL--ANADVTVVDSSF 117
KTSQP +GVF VF L +DG+Q++ I ++ +LSGT+EAARQ A L + +VT++DS
Sbjct: 61 KTSQPSIGVFEKVFKDLTDDGSQVVGIFLARSLSGTIEAARQAADLIGKSKEVTLIDSDL 120
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
D+A +QV AAK A+EG LEEI+A +E +KE+ +LY+ + L NL+KGGR+G ++G
Sbjct: 121 TDRAEAYQVLAAAKDAQEGKSLEEIVAHVERLKEQQKLYMMVVNLNNLIKGGRLGPLAGK 180
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAK----TFKKWLDDLSANLQNKQVAELGISYAGS 233
I++LLNIR+ + M LE KGRG K K+ L D+ + ++ E+ ISY +
Sbjct: 181 IATLLNIRIELHMPGGHLEVAKKGRGKKFSKNCDKRVLKDIEEH--KHEIKEVAISYVDT 238
Query: 234 PELAQEMKESLQPYVKKPISVLE--TGSIIQTHTGENAWAVLIRYE 277
PE + E ++ + I VL T II TH G A+AV E
Sbjct: 239 PEDMKVWTEKIKE-INPDIKVLTRVTSPIISTHAGSGAYAVFYTME 283
>gi|148544003|ref|YP_001271373.1| degV family protein [Lactobacillus reuteri F275]
gi|148531037|gb|ABQ83036.1| degV family protein [Lactobacillus reuteri F275]
Length = 280
Score = 204 bits (518), Expect = 5e-51, Method: Composition-based stats.
Identities = 117/282 (41%), Positives = 182/282 (64%), Gaps = 7/282 (2%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLP 59
M KIKIV DSS + E K+ DITI+PLSVM+DG VY + + + +F +M+++++LP
Sbjct: 1 MAKIKIVCDSSAGLTDEEIKKYDITIIPLSVMIDGTVYVERETITNEQFPEMMKNAKSLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPP+G F D FD+L EDG++++ + M ++SGTV AA Q A + VTV DS D
Sbjct: 61 KTSQPPIGKFVDAFDKLGEDGSEVLCVTMMESISGTVHAAEQAAGMTKTKVTVYDSQTTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+AM FQ+ EAAK+ + G ++E I +++ + + +++Y+ + L+NLV GGRI + +G +S
Sbjct: 121 RAMAFQIIEAAKVIENGGSVQEAIERMKYIFDHSKVYLAIDNLDNLVAGGRISKFAGALS 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN-KQVAELGISYA-GSPELA 237
+LLNI+V++Q+ D Q+ I+KGRG K K D + ++N +V GIS+ G+ E+
Sbjct: 181 NLLNIKVMLQIADGQIHIIMKGRGKKALHKEWDRILNEMKNGPKVMGAGISHVEGNSEVN 240
Query: 238 QEMK--ESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
+ + ++ +P + I V ET II THTG A +L E
Sbjct: 241 RLLTKIKAFEPNLD--IVVRETVPIIATHTGMGACCLLYYTE 280
>gi|58337272|ref|YP_193857.1| putative family protein [Lactobacillus acidophilus NCFM]
gi|58254589|gb|AAV42826.1| putative family protein [Lactobacillus acidophilus NCFM]
Length = 283
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 120/285 (42%), Positives = 187/285 (65%), Gaps = 10/285 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M+KIK++TDSSV + PE K+ +IT+VPL++ +DG Y D D+ +F++ M + +LP
Sbjct: 1 MSKIKVMTDSSVQLTPEEIKKYNITVVPLTITIDGHSYIDGVDITRSDFVKKMNEAESLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANA--DVTVVDSSF 117
KTSQPP+G F + ++L DG+Q+I I ++ ALSGTV+AARQ +A +VT++DS
Sbjct: 61 KTSQPPIGRFVETIEKLTADGSQVIGIFLAKALSGTVDAARQAVEIAGQTDNVTIIDSEL 120
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
D+A FQV AAK ++ G ++EIIA ++++++ +L + + L+NL+KGGR+G VSG
Sbjct: 121 TDRAEGFQVLAAAKDSQAGKSMDEIIAHVKKIRDNQKLEMMVVNLQNLIKGGRLGAVSGR 180
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDD--LSANLQNK-QVAELGISYAGSP 234
I+++LNIR+ +QM +L+ KGRG K F + D+ L NK ++ E+GISY +P
Sbjct: 181 IATMLNIRISLQMPKGELQVYKKGRG-KKFTRAFDERVLKEIADNKDRIKEIGISYVDTP 239
Query: 235 ELAQEMKESLQPYVKKPISVL--ETGSIIQTHTGENAWAVLIRYE 277
E QE+ + ++ + I +L ET II TH G A+A+L E
Sbjct: 240 EQMQELADKIKE-INPDIDILVAETSPIIATHAGNGAYAILYYLE 283
>gi|30020334|ref|NP_831965.1| DegV family protein [Bacillus cereus ATCC 14579]
gi|29895885|gb|AAP09166.1| DegV family protein [Bacillus cereus ATCC 14579]
Length = 280
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 118/272 (43%), Positives = 169/272 (62%), Gaps = 3/272 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M KIKIVTDS+ + +V ++ DI ++PLS+ V+G Y D DL+ EF+ M S LP
Sbjct: 1 MQKIKIVTDSTADLSQDVIEKYDIHVLPLSISVNGQTYLDRVDLQPDEFIEEMIKSEELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F +++D+L EDG++++SIHM+ +SGTV A A++ + VTVVDS FI
Sbjct: 61 KTSQPAMGTFVEMYDKLGEDGSEVLSIHMTSGMSGTVATANSAASMTDTKVTVVDSQFIT 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A+ +QV EAAK+A +G LEEI+ +++EV++ T LY+ + TLENLVKGGRIG+ I
Sbjct: 121 HALAYQVIEAAKMANDGRSLEEILKRVDEVRKNTRLYVVVDTLENLVKGGRIGKGKAFIG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDL-SANLQNKQVAELGISYAGSPELAQ 238
SLLNI+ I ++D P+ K R K L L + K V + I +A + LA+
Sbjct: 181 SLLNIKPIASLEDGVYNPVTKVRSQGQIVKTLAKLFEQDTAGKVVKAVAIPHAKAIPLAE 240
Query: 239 EMKESLQPYVKKPIS-VLETGSIIQTHTGENA 269
MK +++ S + T II THTG A
Sbjct: 241 SMKAAVEKVSGFAQSEIFYTTPIISTHTGPGA 272
>gi|49477572|ref|YP_036360.1| DegV family protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52143207|ref|YP_083621.1| DegV family protein [Bacillus cereus E33L]
gi|49329128|gb|AAT59774.1| DegV family protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51976676|gb|AAU18226.1| DegV family protein [Bacillus cereus E33L]
Length = 280
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 119/272 (43%), Positives = 169/272 (62%), Gaps = 3/272 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M KIKIVTDS+ + EV ++ DI ++PLS+ V+G Y D DL+ EF+ M S LP
Sbjct: 1 MQKIKIVTDSTADLSQEVIEKYDIHVLPLSISVNGQTYLDRVDLQPDEFIEEMIKSEELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F +++D+L EDG++++SIHM+ +SGTV A A++ + VTVVDS FI
Sbjct: 61 KTSQPAMGTFVEMYDKLGEDGSEVLSIHMTSGMSGTVATANSAASMTDTKVTVVDSQFIT 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A+ +QV EAAK+A EG LEEI+ +++EV++ T LY+ + TLENLVKGGRIG+ I
Sbjct: 121 HALAYQVVEAAKMANEGRSLEEILKRVDEVRKNTRLYVVVDTLENLVKGGRIGKGKAFIG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDL-SANLQNKQVAELGISYAGSPELAQ 238
SLLNI+ I ++D P+ K R K L L + K V + I +A + LA+
Sbjct: 181 SLLNIKPIASLEDGVYNPVTKVRSQGQIVKTLAKLFEEDTAGKVVKAVAIPHAKAIPLAE 240
Query: 239 EMKESLQPYVKKPIS-VLETGSIIQTHTGENA 269
+K +++ S + T II THTG A
Sbjct: 241 NVKAAVEKVSGFAQSEIFFTTPIISTHTGPGA 272
>gi|118477677|ref|YP_894828.1| DegV family protein [Bacillus thuringiensis str. Al Hakam]
gi|118416902|gb|ABK85321.1| DegV family protein [Bacillus thuringiensis str. Al Hakam]
Length = 287
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 119/272 (43%), Positives = 169/272 (62%), Gaps = 3/272 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M KIKIVTDS+ + EV ++ DI ++PLS+ V+G Y D DL+ EF+ M S LP
Sbjct: 8 MQKIKIVTDSTADLSQEVIEKYDIHVLPLSISVNGQTYLDRVDLQPDEFIEEMIKSEELP 67
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F +++D+L EDG++++SIHM+ +SGTV A A++ + VTVVDS FI
Sbjct: 68 KTSQPAMGTFVEMYDKLGEDGSEVLSIHMTSGMSGTVATANSAASMTDTKVTVVDSQFIT 127
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A+ +QV EAAK+A EG LEEI+ +++EV++ T LY+ + TLENLVKGGRIG+ I
Sbjct: 128 HALAYQVVEAAKMANEGRSLEEILKRVDEVRKNTRLYVVVDTLENLVKGGRIGKGKAFIG 187
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDL-SANLQNKQVAELGISYAGSPELAQ 238
SLLNI+ I ++D P+ K R K L L + K V + I +A + LA+
Sbjct: 188 SLLNIKPIASLEDGVYNPVTKVRSQGQIVKTLAKLFEEDTAGKVVKAVAIPHAKAIPLAE 247
Query: 239 EMKESLQPYVKKPIS-VLETGSIIQTHTGENA 269
+K +++ S + T II THTG A
Sbjct: 248 NVKAAVEKVSGFAQSEIFFTTPIISTHTGPGA 279
>gi|56420306|ref|YP_147624.1| hypothetical protein GK1771 [Geobacillus kaustophilus HTA426]
gi|56380148|dbj|BAD76056.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 286
Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 121/283 (42%), Positives = 174/283 (61%), Gaps = 9/283 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M IKIVTDS+V + V E + +VPL + VDG + D + +F+ M+++R LP
Sbjct: 1 MKSIKIVTDSTVDVPAAVLAEHGVEVVPLHLTVDGEAFIDRVTITPEQFMAKMKAARELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
K+SQP VG F V+DRL DG++I+SIHM+ LSGTV AA A L A VTVVDS FI
Sbjct: 61 KSSQPSVGEFLAVYDRLGADGSEIVSIHMAGELSGTVRAAEHAAALTEAAVTVVDSQFIS 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A+ FQV EAA+LAK G + +II +++E++ T LY+ L TLE+LVKGGRIGR LI
Sbjct: 121 CALGFQVLEAARLAKAGRSVADIIRRLDEIRRCTRLYVVLDTLEHLVKGGRIGRGKALIG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQ----VAELGISYAGSPE 235
SLL I+ I + D P+ + R +F + + L+ L +Q V ++ I++A +P
Sbjct: 181 SLLRIKPIAALVDGLYTPVAQVR---SFSQAVSHLAGRLVEEQGAKRVEKIAIAHADAPR 237
Query: 236 LAQEMKESLQPYVK-KPISVLETGSIIQTHTGENAWAVLIRYE 277
A+ +KE++ + PI ++ET +I HTG A A++ E
Sbjct: 238 WAERLKEAVTDIIGYSPIDIVETTPVISIHTGPGALALMYYAE 280
>gi|42781340|ref|NP_978587.1| degV family protein [Bacillus cereus ATCC 10987]
gi|42737262|gb|AAS41195.1| degV family protein [Bacillus cereus ATCC 10987]
Length = 280
Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 120/274 (43%), Positives = 169/274 (61%), Gaps = 7/274 (2%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M KIKIVTDS+ + EV ++ DI ++PLS+ V+G Y D DL+ EF+ M S LP
Sbjct: 1 MQKIKIVTDSTADLSQEVIEKYDIHVLPLSISVNGQTYLDRVDLQPDEFIEEMIKSEELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F +++D+L EDG++++SIHM+ +SGTV A A++ + VTVVDS FI
Sbjct: 61 KTSQPAMGTFVEMYDKLGEDGSEVLSIHMTSGMSGTVATANSAASMTDTKVTVVDSQFIT 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A+ +QV EAAK+A EG LEEI+ +++EV++ T LY+ + TLENLVKGGRIG+ I
Sbjct: 121 HALAYQVVEAAKMANEGRSLEEILKRVDEVRKNTRLYVVVDTLENLVKGGRIGKGKAFIG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDL-SANLQNKQVAELGISYAGSPELAQ 238
SLLNI+ I ++D P+ K R K L L + K + + I +A + LA+
Sbjct: 181 SLLNIKPIASLEDGVYNPVTKVRSQGQIVKTLAKLFEEDTAGKVIKAVAIPHAKAIPLAE 240
Query: 239 EMK---ESLQPYVKKPISVLETGSIIQTHTGENA 269
+K E + + K I T II THTG A
Sbjct: 241 NVKAAVEKVSGFAKSEI--FFTTPIISTHTGPGA 272
>gi|149179674|ref|ZP_01858179.1| degV family protein [Bacillus sp. SG-1]
gi|148851866|gb|EDL66011.1| degV family protein [Bacillus sp. SG-1]
Length = 280
Score = 197 bits (500), Expect = 7e-49, Method: Composition-based stats.
Identities = 112/269 (41%), Positives = 172/269 (63%), Gaps = 3/269 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M ++KIVTDS+V + E ++ I +VPLS+ ++G Y D DL F++ M+ S+ LP
Sbjct: 1 MREVKIVTDSTVDLSNEEIEKYGIRVVPLSISIEGETYLDRIDLTPEAFMKKMKESKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
K+SQPP G FA ++D L DG+++ISIHM+ +SGTV +A A ++++DVTV+DS FI
Sbjct: 61 KSSQPPAGEFAKLYDELGSDGSKVISIHMTGGMSGTVRSAETAAEMSSSDVTVIDSRFIS 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ + FQV EAAK+A EG E+I+ +IE++K T L++ + TLENLVKGGRIG+ LI
Sbjct: 121 KGLSFQVIEAAKMAAEGKSPEDILTRIEQIKNATNLFVVVDTLENLVKGGRIGKGRALIG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWL-DDLSANLQNKQVAELGISYAGSPELAQ 238
SLLNI+ I ++ + P+ K R K+L + +++ K + +G+ +A ELAQ
Sbjct: 181 SLLNIKPIASLEGGEYTPVAKVRSHSQVVKYLAAEFVNDVKGKTIKGVGLVHADGFELAQ 240
Query: 239 EMKESLQPYVK-KPISVLETGSIIQTHTG 266
++K + I + +T +I THTG
Sbjct: 241 KLKSRIIELTGYDSIEIEDTTPVISTHTG 269
>gi|30262260|ref|NP_844637.1| degV family protein [Bacillus anthracis str. Ames]
gi|47527544|ref|YP_018893.1| degv family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49185102|ref|YP_028354.1| degV family protein [Bacillus anthracis str. Sterne]
gi|65319551|ref|ZP_00392510.1| COG1307: Uncharacterized protein conserved in bacteria [Bacillus
anthracis str. A2012]
gi|30256891|gb|AAP26123.1| degV family protein [Bacillus anthracis str. Ames]
gi|47502692|gb|AAT31368.1| degV family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49179029|gb|AAT54405.1| degV family protein [Bacillus anthracis str. Sterne]
Length = 282
Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats.
Identities = 119/274 (43%), Positives = 171/274 (62%), Gaps = 5/274 (1%)
Query: 1 MTKIKIVTDSS--VTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRN 57
M KIKIVTDS+ +++ EV ++ DI ++PLS+ V+G Y D DL+ EF+ M S
Sbjct: 1 MQKIKIVTDSTADLSLSQEVIEKYDIHVLPLSISVNGQTYLDRVDLQPDEFIEEMIKSEE 60
Query: 58 LPKTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSF 117
LPKTSQP +G F +++D+L EDG++++SIHM+ +SGTV A A++ + VTVVDS F
Sbjct: 61 LPKTSQPAMGTFVEMYDKLGEDGSEVLSIHMTSGMSGTVATANSAASMTDTKVTVVDSQF 120
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
I A+ +QV EAAK+A EG LEEI+ +++EV++ T LY+ + TLENLVKGGRIG+
Sbjct: 121 ITHALAYQVVEAAKMANEGRSLEEILKRVDEVRKNTRLYVVVDTLENLVKGGRIGKGKAF 180
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDL-SANLQNKQVAELGISYAGSPEL 236
I SLLNI+ I ++D P+ K R K L L + K V + I +A + L
Sbjct: 181 IGSLLNIKPIASLEDGVYNPVTKVRSQGQIVKTLAKLFEEDTAGKVVKAVAIPHAKAIPL 240
Query: 237 AQEMKESLQPYVKKPIS-VLETGSIIQTHTGENA 269
A+ +K +++ S + T II THTG A
Sbjct: 241 AENVKAAVEKVSGFAQSEIFFTTPIISTHTGPGA 274
>gi|89208501|ref|ZP_01187004.1| DegV [Bacillus weihenstephanensis KBAB4]
gi|89153560|gb|EAR73626.1| DegV [Bacillus weihenstephanensis KBAB4]
Length = 280
Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats.
Identities = 117/275 (42%), Positives = 172/275 (62%), Gaps = 9/275 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M KIKIVTDS+ + ++ ++ DI ++PLS+ V+G Y D DL+ EF+ M S LP
Sbjct: 1 MQKIKIVTDSTADLSKDILEKYDIHVLPLSISVNGQTYLDRVDLQPDEFIEEMIKSEELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F +++D+L EDG+Q++SIHM+ +SGTV A A++ + VTVVDS FI
Sbjct: 61 KTSQPAMGTFVEMYDKLGEDGSQVLSIHMTGGMSGTVATANSAASMTDTKVTVVDSQFIT 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A+ +QV EAAK+AKE LE+I+ +I+EV++ T LY+ + TLENLVKGGRIG+ I
Sbjct: 121 HALAYQVIEAAKMAKEECSLEDILKRIDEVRKNTRLYVVVDTLENLVKGGRIGKGKAFIG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVK----GRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPE 235
SLLNI+ I ++ P+ K G+ KT K ++ +A K V + I +A +
Sbjct: 181 SLLNIKPIASLEGGVYNPVTKVRSQGQIVKTLAKLFEEDTA---GKVVKAVAIPHAKAIP 237
Query: 236 LAQEMKESLQPYVKKPIS-VLETGSIIQTHTGENA 269
LA+ +K +++ S + T +I THTG A
Sbjct: 238 LAESVKAAVEKVNGFTQSEIFYTTPVISTHTGPGA 272
>gi|152975435|ref|YP_001374952.1| degV family protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152024187|gb|ABS21957.1| degV family protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
Length = 280
Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats.
Identities = 114/272 (41%), Positives = 167/272 (61%), Gaps = 3/272 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M KIKIVTDS+ + +V + DI ++PLS+ V+G Y D D++ EF+ M S LP
Sbjct: 1 MQKIKIVTDSTADLSQDVIERYDIHVIPLSISVNGQTYLDRIDIQPDEFIEEMLKSEELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F +++++L EDG+Q++SIHM+ +SGTV A A++ + VTVVDS FI
Sbjct: 61 KTSQPAMGSFVEMYEKLGEDGSQVLSIHMTGGMSGTVATANSAASMTDTKVTVVDSQFIS 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ +QV EAAK+ + G LEEI+ +++EV++ T LY+ + TLENLVKGGRIG+ I
Sbjct: 121 HGLAYQVLEAAKMVQAGRSLEEILNRLDEVRKNTRLYVVVDTLENLVKGGRIGKGKAFIG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDL-SANLQNKQVAELGISYAGSPELAQ 238
SLLNI+ I ++D P+ K R K L L ++ K V + I +A + LA+
Sbjct: 181 SLLNIKPIASLEDGVYNPVTKVRSQGQIVKTLAKLFEQDIAGKTVKAVAIPHAKALSLAE 240
Query: 239 EMKESLQPYVK-KPISVLETGSIIQTHTGENA 269
+K +++ +L T II THTG A
Sbjct: 241 SVKAAVEKVSGFAQAEILYTTPIISTHTGPGA 272
>gi|28379630|ref|NP_786522.1| DegV family protein [Lactobacillus plantarum WCFS1]
gi|28272470|emb|CAD65394.1| DegV family protein [Lactobacillus plantarum WCFS1]
Length = 279
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 109/272 (40%), Positives = 170/272 (62%), Gaps = 2/272 (0%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
IKIVTDSSV + + +I +VPL V G + +D + EF + M S LP TSQ
Sbjct: 3 IKIVTDSSVQLTTAEIAQYNIKVVPLLVGFGGDLIADTAVSTAEFDQQMAVSPVLPTTSQ 62
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAMK 123
PP+G F +D L DG+Q++S+H++ LSGTV AARQ A LA+ DVTV+D+ D+ M
Sbjct: 63 PPIGDFVSCYDELTADGSQVLSLHLTETLSGTVNAARQAAKLASGDVTVIDTQAADRGMA 122
Query: 124 FQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLLN 183
FQV AA++A GAD+ I+AKI +++ T+ Y+ + TL+NLVKGGR+ +++G++++L+
Sbjct: 123 FQVLTAARMAHAGADMATILAKITVIRQHTKTYLFVDTLDNLVKGGRVPKLAGMVTNLIK 182
Query: 184 IRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN-KQVAELGISYAGSPELAQEMKE 242
++ + +++ +L+ +GRG K K + + L + +V GISY G P +A+ ++
Sbjct: 183 LKFVFELEAGKLKLYTRGRGKKALIKAQEQILDQLADATRVEAAGISYVGEPSVAEAPEK 242
Query: 243 SLQPYVKKPIS-VLETGSIIQTHTGENAWAVL 273
LQ V + V T II THTG A+A++
Sbjct: 243 LLQQVVPQVTPLVARTSPIIATHTGVGAYALM 274
>gi|42519028|ref|NP_964958.1| hypothetical protein LJ1102 [Lactobacillus johnsonii NCC 533]
gi|41583315|gb|AAS08924.1| hypothetical protein LJ_1102 [Lactobacillus johnsonii NCC 533]
Length = 285
Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats.
Identities = 118/286 (41%), Positives = 175/286 (61%), Gaps = 12/286 (4%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KIK+VTDSSV + PE + DIT+VPL++ +DG Y+D D+ EF++ M S LP
Sbjct: 1 MAKIKVVTDSSVQLTPEEIDKYDITVVPLTITIDGKTYTDGIDISREEFVKKMDESEELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL--ANADVTVVDSSF 117
KTSQP +G+F VF L DG+Q + I ++ +LSGT+EAARQ A + +VT++DS
Sbjct: 61 KTSQPSIGIFEKVFTELTADGSQAVGIFLARSLSGTIEAARQAADIIGKTKEVTLIDSEL 120
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
D+A +QV AAK A+ G LEEI+ +E++K+K +L + + L NL+KGGR+G ++G
Sbjct: 121 TDRAEAYQVLAAAKDAQAGKSLEEIVNHVEDLKKKQKLQMMVVNLNNLIKGGRLGPLAGK 180
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQ--VAELGISYAGSPE 235
I++LLNIR+ + M L+ KGRG K K + + +++ + + E+ ISY +PE
Sbjct: 181 IATLLNIRIELHMPGGNLDVAKKGRGKKFSKNFDKRVLKDIEEHKHDIKEVAISYVDTPE 240
Query: 236 ----LAQEMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
++KE + P +K V T II TH G A+AV E
Sbjct: 241 DMEVWTNKIKE-INPDIKVLTRV--TSPIIATHAGSGAYAVFYTTE 283
>gi|104774165|ref|YP_619145.1| hypothetical protein Ldb1278 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514258|ref|YP_813164.1| hypothetical protein LBUL_1195 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|103423246|emb|CAI98079.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093573|gb|ABJ58726.1| hypothetical protein LBUL_1195 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 281
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 113/284 (39%), Positives = 175/284 (61%), Gaps = 10/284 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M+KIKI+TDSSV + PE ++ IT+VPLSV +DG Y+D D+ +F++ M + LP
Sbjct: 1 MSKIKIMTDSSVQLSPEEIEKYGITVVPLSVTIDGHTYTDGVDITRADFIQKMDEAEKLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPPVG+F + + L DG++++ I M+ LSGTV++ARQ A + +TV+D + D
Sbjct: 61 KTSQPPVGLFVERMEELTADGSEVLGIFMAKTLSGTVDSARQAAEMVAGKITVIDCGYTD 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
++ + EAAK A+ G +++EI+A ++++ + L + + L+N++ GGR+G+ +G +
Sbjct: 121 RSQGYYCIEAAKDAEAGKEMDEILAHLDQIGKNMYLEMMVPNLQNILAGGRLGKWAGRVV 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN--KQVAELGISYAGS---- 233
S LN V + MK+ L +GRG K KK+ D L L+ +V +GISY +
Sbjct: 181 SALNFHVGLTMKEGSLNVPYRGRGKKFIKKFDDMLVDQLKELGDKVKYVGISYVDTRDKM 240
Query: 234 PELAQEMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
ELAQ KE + P ++ I V ET II TH G A+AV+ E
Sbjct: 241 EELAQRFKE-VNPDLE--ILVQETSPIIITHAGHEAYAVMFYTE 281
>gi|52080684|ref|YP_079475.1| DegVA [Bacillus licheniformis ATCC 14580]
gi|52786057|ref|YP_091886.1| hypothetical protein BLi02313 [Bacillus licheniformis ATCC 14580]
gi|52003895|gb|AAU23837.1| DegVA [Bacillus licheniformis ATCC 14580]
gi|52348559|gb|AAU41193.1| conserved hypothetical protein [Bacillus licheniformis DSM 13]
Length = 280
Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats.
Identities = 101/272 (37%), Positives = 170/272 (62%), Gaps = 3/272 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
MT IKIVTDS+ + E+ ++ I+++PLS+ +DG VY D D++ EF+ M+S+ LP
Sbjct: 1 MTSIKIVTDSTADLSEELLRKYHISVLPLSISIDGTVYRDRFDIQPDEFIEKMESAAELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
K+SQPP+G F ++++ L DG+++ISIH+S LSGT + A + + ++TV+DS +I
Sbjct: 61 KSSQPPLGAFIELYEELTADGSEVISIHLSSELSGTYQTAVSASNMVGGNITVIDSMYIS 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ + FQV AA LA+EG E I+ +E ++++T LY+ + +NL+KGGRIGR L+
Sbjct: 121 KGLGFQVVRAALLAEEGMTAEAIVKDLENLRDRTSLYVTIDHFDNLIKGGRIGRGKALLG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLD-DLSANLQNKQVAELGISYAGSPELAQ 238
SLL ++ I +++D P R + ++L + ++ + V +GI++A + +LA
Sbjct: 181 SLLKVKPIARLEDGIYTPEKNVRSSSQLIRYLTGQFVSAVKGRTVQAIGIAHADALDLAH 240
Query: 239 EMKESLQPYVKK-PISVLETGSIIQTHTGENA 269
+K+SL ++ I + T II HTG+ A
Sbjct: 241 RLKDSLLEHIPGIDIDIDYTTPIISVHTGKGA 272
>gi|81428575|ref|YP_395575.1| Hypothetical protein, DegV family [Lactobacillus sakei subsp. sakei
23K]
gi|78610217|emb|CAI55266.1| Hypothetical protein, DegV family [Lactobacillus sakei subsp. sakei
23K]
Length = 280
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 113/276 (40%), Positives = 174/276 (63%), Gaps = 8/276 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFL-RLMQSSRNLPKT 61
IKIVTDSS+ + + DI IVPL++ + D + EFL RL ++ P T
Sbjct: 3 IKIVTDSSIQLTTAEQERYDIHIVPLTIQQGAESFVDGQTITRAEFLSRLQSATTEFPTT 62
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQA 121
SQP VG F +++D+L DG+ I+SIH + LSGT+E A A + +DV V+DS ID+
Sbjct: 63 SQPTVGSFVELYDQLGADGSTILSIHCTGLLSGTIEGAHTAAQQSTSDVHVIDSKEIDRG 122
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
+ +QV AA+ + G L EIIA + EV+ KTE Y+ L +L+ L +GGRI R++GL++ L
Sbjct: 123 LAYQVVAAAQDVEAGKTLTEIIAHLNEVRSKTETYVFLDSLDALQRGGRISRMAGLLTKL 182
Query: 182 LNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAG-SPELAQEM 240
+ ++VI+++ D +LE I KGRG KTF K ++++ +L + VAE+GIS+ G + EL+ ++
Sbjct: 183 IKLKVIVRLTDTELEVIAKGRGLKTFTKEINNIREHLATQDVAEIGISHVGITDELSAKI 242
Query: 241 KESL---QPYVKKPISVLETGSIIQTHTGENAWAVL 273
+ +L QP+V P +V T +I +H G A+ V
Sbjct: 243 QATLEQTQPHV--PYTVALTSPVIMSHVGLGAFGVF 276
>gi|75764394|ref|ZP_00743906.1| DegV family protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74488120|gb|EAO51824.1| DegV family protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 271
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 110/249 (44%), Positives = 159/249 (63%), Gaps = 4/249 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M KIKIVTDS+ + EV ++ DI ++PLS+ V+G Y D DL+ EF+ M S LP
Sbjct: 8 MQKIKIVTDSTADLSQEVIEKYDIHVLPLSISVNGQTYLDRVDLQPDEFIEEMLKSEELP 67
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F +++++L EDG++++SIHM+ +SGTV A A++ + VTVVDS FI
Sbjct: 68 KTSQPAMGTFVEMYNKLGEDGSEVLSIHMTSGMSGTVATANSAASMTDTKVTVVDSQFIT 127
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A+ +QV EAAK+A EG LEEI+ +++EV++ T LY+ + TLENLVKGGRIG+ I
Sbjct: 128 HALAYQVIEAAKMANEGRSLEEILKRVDEVRKNTRLYVVVDTLENLVKGGRIGKGKAFIG 187
Query: 180 --SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDL-SANLQNKQVAELGISYAGSPEL 236
SLLNI+ I ++D P+ K R K L L + K V + I +A + L
Sbjct: 188 VFSLLNIKPIASLEDGVYNPVTKVRSQGQIVKTLAKLFEQDTAGKVVKAVAIPHAKAIPL 247
Query: 237 AQEMKESLQ 245
A+ MK +++
Sbjct: 248 AESMKAAVE 256
>gi|56965775|ref|YP_177509.1| hypothetical protein ABC4017 [Bacillus clausii KSM-K16]
gi|56912021|dbj|BAD66548.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 282
Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats.
Identities = 121/281 (43%), Positives = 177/281 (62%), Gaps = 11/281 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M IKIVTDS+ I+ + + L IT+VPLS+ V G Y D D+ + EF L+ + LP
Sbjct: 1 MANIKIVTDSTCDIDKQEMERLGITVVPLSIEVGGKTYRDGVDITKKEFATLLTAGGALP 60
Query: 60 KTSQPPVGVFADVFDRLAEDG--AQIISIHMSHALSGTVEAARQGATLANADVTVVDSSF 117
K+SQPPVGVF DV+ RL E+G Q++S+HM+ ALSGTV++A+ A + VTVVDS F
Sbjct: 61 KSSQPPVGVFMDVYQRLLEEGEEVQVLSLHMTEALSGTVQSAQMAAAEMDGRVTVVDSHF 120
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
I A+ FQV EAA++A G +E I+A+IE+++ KT LYI + TLE L KGGRIG+ L
Sbjct: 121 ISTALSFQVKEAAEMAAAGETMERILAEIEQIRAKTSLYIAVDTLEYLAKGGRIGKGKAL 180
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQ----NKQVAELGISYAGS 233
+ SLL I+ I +K+ P+ R T+K+ +D + K+V +GI++ +
Sbjct: 181 LGSLLKIKPIAALKEGTYTPVATKR---TYKQVVDFFTEKFHLETAGKKVGAVGIAHIEA 237
Query: 234 PELAQEMKESLQPY-VKKPISVLETGSIIQTHTGENAWAVL 273
+L +++ +SL+ +S+LET II THTG A A++
Sbjct: 238 EQLGKKIVDSLKKVRADLSVSILETSPIISTHTGPGAIALM 278
>gi|116491044|ref|YP_810588.1| hypothetical protein OEOE_1014 [Oenococcus oeni PSU-1]
gi|116091769|gb|ABJ56923.1| hypothetical protein OEOE_1014 [Oenococcus oeni PSU-1]
Length = 282
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 106/278 (38%), Positives = 169/278 (60%), Gaps = 5/278 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M+ IKIVTDSS + E K+ DI +VPL V+++ Y D D+ EF + M+++R LP
Sbjct: 1 MSIIKIVTDSSAALTDEEIKKYDIGVVPLQVLINDHNYLDGVDISRNEFFKKMETARKLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDG--AQIISIHMSHALSGTVEAARQGATLANADVTVVDSSF 117
+SQP V F D ++ + AQI+SIH+S LSGT + A A + V +DS
Sbjct: 61 ASSQPAVINFYDTYESILRKNPEAQILSIHLSGGLSGTGQTAATVAKDFSGKVIFLDSHS 120
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
ID+ + FQV AA++ +EG +EEII+ + ++K +T++++ L +L+NL+ GGRI R SGL
Sbjct: 121 IDRGLSFQVLAAARMVQEGKTIEEIISLLTKIKNQTKIFLSLESLKNLIAGGRISRASGL 180
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN-KQVAELGISYAGSPEL 236
+ SLLNI+V ++ D ++ I KGRG K+ K+ D + +Q K++ +G+S+ +
Sbjct: 181 VGSLLNIKVGLEFIDDSIKTISKGRGEKSISKFYDQVIDGMQKLKKIYSIGVSHVDADPE 240
Query: 237 AQEMKESLQP-YVKKPISVLETGSIIQTHTGENAWAVL 273
A+E+ L+ + P+ +L T I+ THTG +L
Sbjct: 241 AKELSNRLRKLFPNTPLVMLGTSPIVATHTGIGTLCIL 278
>gi|116617869|ref|YP_818240.1| hypothetical protein LEUM_0758 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096716|gb|ABJ61867.1| hypothetical protein LEUM_0758 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 284
Score = 181 bits (458), Expect = 6e-44, Method: Composition-based stats.
Identities = 118/282 (41%), Positives = 180/282 (63%), Gaps = 7/282 (2%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M+ IKIVTDS+V + PE + DI IVPLSV +DG VY D ++ EFL M S++LP
Sbjct: 1 MSNIKIVTDSAVALTPEEITKYDIKIVPLSVQIDGTVYEDGVTIQRDEFLEKMIESKSLP 60
Query: 60 KTSQPPVGVFADVFDRLAED--GAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSF 117
+TSQP +G F V+D + + ++I+S+H+S LSGTV AA Q A L +A +T D+
Sbjct: 61 QTSQPSIGTFQAVYDDIHQKFPDSEILSLHLSSGLSGTVRAAEQAAALTSAKITTFDTLA 120
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
D+A F V +AAK+A +GA + EI+ +E+ ++++ +++ ++L N+V GGR+ + G+
Sbjct: 121 ADRAQAFVVLQAAKMASQGATMAEILPAVEKARDESHIFLSFTSLTNMVAGGRLSKTQGI 180
Query: 178 ISSLLNIRV--IMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN-KQVAELGISYAGSP 234
I +LLNI+V + D +E ++KGRG KT K+ +++ A +Q K+V +GIS+AG P
Sbjct: 181 IGNLLNIKVGAGVTKNDGTVEVLLKGRGMKTIAKFNNNVIAKMQEYKEVLSIGISHAGIP 240
Query: 235 ELAQEMKESLQP-YVKKPISVLETGSIIQTHTGENAWAVLIR 275
E A ++ L+ + I VL T II THTG A A+L R
Sbjct: 241 EEAAQIAARLKAIWPDIEIPVLNTTPIISTHTGVGALAILYR 282
>gi|118586881|ref|ZP_01544315.1| hypothetical protein, DegV family [Oenococcus oeni ATCC BAA-1163]
gi|118432713|gb|EAV39445.1| hypothetical protein, DegV family [Oenococcus oeni ATCC BAA-1163]
Length = 282
Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats.
Identities = 106/278 (38%), Positives = 170/278 (61%), Gaps = 5/278 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M+ IKIVTDSS + E K+ DI +VPL V+++ Y D D+ EF + ++++R LP
Sbjct: 1 MSIIKIVTDSSAALTDEEIKKYDIGVVPLQVLINDHNYLDGVDISRNEFFKKIETARKLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDG--AQIISIHMSHALSGTVEAARQGATLANADVTVVDSSF 117
+SQP V F D ++ + AQI+SIH+S LSGT + A A + V +DS
Sbjct: 61 ASSQPAVINFYDTYESILRKNPEAQILSIHLSGGLSGTGQTAATVAKDFSGKVIFLDSHS 120
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
ID+ + FQV AA++A+EG +EEII+ + ++K +T++++ L +L+NL+ GGRI R SGL
Sbjct: 121 IDRGLSFQVLAAARMAQEGKTIEEIISLLTKIKNQTKIFLSLESLKNLIAGGRISRASGL 180
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN-KQVAELGISYAGSPEL 236
+ SLLNI+V ++ D ++ I KGRG K+ K+ D + +Q K++ +G+S+ +
Sbjct: 181 VVSLLNIKVGLEFIDDSIKTISKGRGEKSISKFYDQVIDGMQKLKKIYSIGVSHVDADPE 240
Query: 237 AQEMKESLQP-YVKKPISVLETGSIIQTHTGENAWAVL 273
A+E+ L+ + P+ +L T I+ THTG +L
Sbjct: 241 AKELSNRLRKLFPNTPLVMLGTSPIVATHTGIGTLCIL 278
>gi|16803903|ref|NP_465388.1| hypothetical protein lmo1863 [Listeria monocytogenes EGD-e]
gi|30179846|sp|Q8Y637|Y1863_LISMO UPF0230 protein lmo1863
gi|16411317|emb|CAC99941.1| lmo1863 [Listeria monocytogenes]
Length = 279
Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats.
Identities = 105/276 (38%), Positives = 171/276 (61%), Gaps = 4/276 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYS-DADLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E A + +I ++ L+V +DG VY+ D+ EF+ M ++ LP
Sbjct: 1 MRKIKIITDSTAGLTLEEAAKWNIDVLYLTVEIDGKVYNPKTDITPEEFMVRMAETKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
K+SQP +G F + +++ +G +I+SIH++ LSGTV AARQ A + ++TVVD +
Sbjct: 61 KSSQPAIGSFVEAYEKYTAEGYEILSIHLTEKLSGTVNAARQAADMVEGNITVVDCDYTA 120
Query: 120 QAMKFQVTEAAKLAKEGA-DLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ FQV +AA++A+ G +EEI AKI ++++KT+LYI + TL+NL+KGGR+GR+ G +
Sbjct: 121 RGQAFQVLKAAEMAQSGDYSVEEIHAKINDIRDKTKLYIVVVTLDNLIKGGRVGRMQGFL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SLLNI++I ++ D QLE K R K ++ +L + + K++ L + +A LA
Sbjct: 181 GSLLNIKLIAKLTDGQLEEETKVRSNKKVLQYCLNLIKD-EPKKIQHLDVVHANGLNLAD 239
Query: 239 E-MKESLQPYVKKPISVLETGSIIQTHTGENAWAVL 273
+ + ES + I + +I TH G A+A +
Sbjct: 240 DFIAESKEITGLTEIPLFFADPVISTHAGTGAFAFM 275
>gi|47096905|ref|ZP_00234483.1| DegV family protein [Listeria monocytogenes str. 1/2a F6854]
gi|153175092|ref|ZP_01930487.1| hypothetical protein LMIG_00507 [Listeria monocytogenes FSL N3-165]
gi|153183351|ref|ZP_01934211.1| hypothetical protein LMOG_00064 [Listeria monocytogenes J0161]
gi|153191365|ref|ZP_01938585.1| hypothetical protein LMPG_00605 [Listeria monocytogenes J2818]
gi|47014718|gb|EAL05673.1| DegV family protein [Listeria monocytogenes str. 1/2a F6854]
gi|126943642|gb|EBA21359.1| hypothetical protein LMOG_00064 [Listeria monocytogenes J0161]
gi|127765144|gb|EBA25494.1| hypothetical protein LMPG_00605 [Listeria monocytogenes J2818]
gi|133729545|gb|EBA31243.1| hypothetical protein LMIG_00507 [Listeria monocytogenes FSL N3-165]
Length = 279
Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats.
Identities = 104/276 (37%), Positives = 171/276 (61%), Gaps = 4/276 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYS-DADLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E A + +I ++ L+V +DG +Y+ D+ EF+ M ++ LP
Sbjct: 1 MRKIKIITDSTAGLTLEEAAKWNIDVLYLTVEIDGQIYNPKTDITPEEFMVRMAETKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
K+SQP +G F + +++ +G +I+SIH++ LSGTV AARQ A + ++TVVD +
Sbjct: 61 KSSQPAIGSFVEAYEKYTAEGYEILSIHLTEKLSGTVNAARQAADMVEGNITVVDCDYTA 120
Query: 120 QAMKFQVTEAAKLAKEGA-DLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ FQV +AA++A+ G +EEI AKI ++++KT+LYI + TL+NL+KGGR+GR+ G +
Sbjct: 121 RGQAFQVLKAAEMAQSGDYSVEEIHAKINDIRDKTKLYIVVVTLDNLIKGGRVGRMQGFL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SLLNI++I ++ D QLE K R K ++ +L + + K++ L + +A LA
Sbjct: 181 GSLLNIKLIAKLTDGQLEEETKVRSNKKVLQYCLNLIKD-EPKKIQHLDVVHANGLNLAD 239
Query: 239 E-MKESLQPYVKKPISVLETGSIIQTHTGENAWAVL 273
+ + ES + I + +I TH G A+A +
Sbjct: 240 DFIAESKEITGLTEIPLFFADPVISTHAGTGAFAFM 275
>gi|47093245|ref|ZP_00231017.1| DegV family protein [Listeria monocytogenes str. 4b H7858]
gi|153202858|ref|ZP_01944296.1| hypothetical protein LMSG_01068 [Listeria monocytogenes HPB2262]
gi|47018377|gb|EAL09138.1| DegV family protein [Listeria monocytogenes str. 4b H7858]
gi|133734928|gb|EBA36626.1| hypothetical protein LMSG_01068 [Listeria monocytogenes HPB2262]
Length = 279
Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats.
Identities = 104/276 (37%), Positives = 170/276 (61%), Gaps = 4/276 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYS-DADLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E A + +I ++ L+V +DG +Y+ D+ EF+ M ++ LP
Sbjct: 1 MRKIKIITDSTAGLTLEEAAKWNIDVLYLTVEIDGQIYNPKTDITPEEFMVRMAETKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
K+SQP +G F + +++ +G +I+SIH++ LSGTV AARQ A + ++TVVD +
Sbjct: 61 KSSQPAIGSFVEAYEKYTAEGYEILSIHLTEKLSGTVNAARQAADMVEGNITVVDCDYTA 120
Query: 120 QAMKFQVTEAAKLAKEGA-DLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ FQV +AA++A+ G +EEI AKI ++++KT+LYI + TL+NL+KGGR+GR+ G
Sbjct: 121 RGQAFQVLKAAEMAQSGDYSVEEIHAKINDIRDKTKLYIVVVTLDNLIKGGRVGRMQGFF 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SLLNI++I ++ D QLE K R K ++ +L + + K++ L + +A LA
Sbjct: 181 GSLLNIKLIAKLTDGQLEEETKVRSNKKVLQYCLNLIKD-EPKKIQHLDVVHADGLNLAD 239
Query: 239 E-MKESLQPYVKKPISVLETGSIIQTHTGENAWAVL 273
+ + ES + I + +I TH G A+A +
Sbjct: 240 DFIAESKEITGLTEIPLFFADPVISTHAGTGAFAFM 275
>gi|116873298|ref|YP_850079.1| DegV family protein [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116742176|emb|CAK21300.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 279
Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats.
Identities = 104/276 (37%), Positives = 171/276 (61%), Gaps = 4/276 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYS-DADLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E A + +I ++ L+V +DG +Y+ +D+ EF+ M ++ LP
Sbjct: 1 MRKIKIITDSTAGLTLEEAAKWNIEVLYLTVEIDGKIYNPKSDITPEEFMVRMAETKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
K+SQP +G F + +++ +G +I+SIH++ LSGTV AARQ A + ++TVVD +
Sbjct: 61 KSSQPAIGSFVEAYEKYTAEGYEILSIHLTEKLSGTVNAARQAADMVEGNITVVDCDYTA 120
Query: 120 QAMKFQVTEAAKLAKEG-ADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ FQV +AA++A+ G +EEI AKI ++++KT+LYI + TL+NL+KGGR+GR+ G +
Sbjct: 121 RGQAFQVLKAAEMAQSGDYSVEEIHAKINDIRDKTKLYIVVVTLDNLIKGGRVGRMQGFL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SLLNI++I ++ D QLE K R K ++ +L + K++ L + +A LA
Sbjct: 181 GSLLNIKLIAKLTDGQLEEETKVRSNKKVLQYCLNLIKE-EPKKIQHLDVVHANGLNLAD 239
Query: 239 E-MKESLQPYVKKPISVLETGSIIQTHTGENAWAVL 273
+ + ES + I + +I TH G A+A +
Sbjct: 240 DFIAESKEITGLTEIPLFFADPVISTHAGAGAFAFM 275
>gi|46908095|ref|YP_014484.1| DegV family protein [Listeria monocytogenes str. 4b F2365]
gi|153167706|ref|ZP_01927810.1| hypothetical protein LMHG_00632 [Listeria monocytogenes FSL N1-017]
gi|46881365|gb|AAT04661.1| DegV family protein [Listeria monocytogenes str. 4b F2365]
gi|133726805|gb|EBA28503.1| hypothetical protein LMHG_00632 [Listeria monocytogenes FSL N1-017]
Length = 279
Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats.
Identities = 104/276 (37%), Positives = 169/276 (61%), Gaps = 4/276 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYS-DADLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E A + +I ++ L+V +DG +Y+ D+ EF+ M ++ LP
Sbjct: 1 MRKIKIITDSTAGLTLEEAAKWNIDVLYLTVEIDGQIYNPKTDITPEEFMVRMAETKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
K+SQP +G F + +++ +G +I+SIH++ LSGTV AARQ A + ++TVVD +
Sbjct: 61 KSSQPAIGSFVEAYEKYTAEGYEILSIHLTEKLSGTVNAARQAADMVEGNITVVDCDYTA 120
Query: 120 QAMKFQVTEAAKLAKEGA-DLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ FQV +AA++A+ G +EEI AKI ++++KT+LYI + TL+NL+KGGR+GR+ G
Sbjct: 121 RGQAFQVLKAAEMAQSGDYSVEEIHAKINDIRDKTKLYIVVVTLDNLIKGGRVGRMQGFF 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SLLNI++I ++ D QLE K R K ++ +L + + K + L + +A LA
Sbjct: 181 GSLLNIKLIAKLTDGQLEEETKVRSNKKVLQYCLNLIKD-EPKNIQHLDVVHADGLNLAD 239
Query: 239 E-MKESLQPYVKKPISVLETGSIIQTHTGENAWAVL 273
+ + ES + I + +I TH G A+A +
Sbjct: 240 DFIAESKEITGLTEIPLFFADPVISTHAGTGAFAFM 275
>gi|16801043|ref|NP_471311.1| hypothetical protein lin1977 [Listeria innocua Clip11262]
gi|30179851|sp|Q92AE5|Y1977_LISIN UPF0230 protein lin1977
gi|16414478|emb|CAC97207.1| lin1977 [Listeria innocua]
Length = 279
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 104/276 (37%), Positives = 171/276 (61%), Gaps = 4/276 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYS-DADLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E A + +I ++ L+V +DG VY+ D+ EF+ M ++ LP
Sbjct: 1 MRKIKIITDSTAGLTLEEAAKWNIEVLYLTVEIDGKVYNPKTDITPEEFMVRMAETKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
K+SQP +G F + +++ +G +I+SIH++ LSGTV AARQ A + ++TVVD +
Sbjct: 61 KSSQPAIGSFVEAYEKYTAEGYEILSIHLTEKLSGTVNAARQAADMVEGNITVVDCDYTA 120
Query: 120 QAMKFQVTEAAKLAKEG-ADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ FQV +AA++A+ G +EEI A I ++++KT+LYI + TL+NL+KGGR+GR+ G +
Sbjct: 121 RGQAFQVLKAAEMAQAGDYSVEEIHAAINDIRDKTKLYIVVVTLDNLIKGGRVGRMQGFL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SLLNI++I ++ D QLE K R K ++ +L + + K++ +L + +A LA
Sbjct: 181 GSLLNIKLIAKLTDGQLEEETKVRSNKKVLQYCLNLIKD-EPKKIQQLDVVHANGLNLAD 239
Query: 239 E-MKESLQPYVKKPISVLETGSIIQTHTGENAWAVL 273
+ + ES + I + +I TH G A+A +
Sbjct: 240 DFIAESKEITGLTEIPLFFADPVISTHAGTGAFAFM 275
>gi|153196370|ref|ZP_01940740.1| hypothetical protein LMRG_01010 [Listeria monocytogenes 10403S]
gi|127633831|gb|EBA23223.1| hypothetical protein LMRG_01010 [Listeria monocytogenes 10403S]
Length = 279
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 103/276 (37%), Positives = 170/276 (61%), Gaps = 4/276 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYS-DADLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E + +I ++ L+V +DG +Y+ D+ EF+ M ++ LP
Sbjct: 1 MRKIKIITDSTAGLTLEEVAKWNIDVLYLTVEIDGQIYNPKTDITPEEFMVRMAETKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
K+SQP +G F + +++ +G +I+SIH++ LSGTV AARQ A + ++TVVD +
Sbjct: 61 KSSQPAIGSFVEAYEKYTAEGYEILSIHLTEKLSGTVNAARQAADMVEGNITVVDCDYTA 120
Query: 120 QAMKFQVTEAAKLAKEGA-DLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ FQV +AA++A+ G +EEI AKI ++++KT+LYI + TL+NL+KGGR+GR+ G +
Sbjct: 121 RGQAFQVLKAAEMAQSGDYSVEEIHAKINDIRDKTKLYIVVVTLDNLIKGGRVGRMQGFL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SLLNI++I ++ D QLE K R K ++ +L + + K++ L + +A LA
Sbjct: 181 GSLLNIKLIAKLTDGQLEEETKVRSNKKVLQYCLNLIKD-EPKKIQHLDVVHANGLNLAD 239
Query: 239 E-MKESLQPYVKKPISVLETGSIIQTHTGENAWAVL 273
+ + ES + I + +I TH G A+A +
Sbjct: 240 DFIAESKEITGLTEIPLFFADPVISTHAGTGAFAFM 275
>gi|118587376|ref|ZP_01544802.1| hypothetical protein, DegV family [Oenococcus oeni ATCC BAA-1163]
gi|118432200|gb|EAV38940.1| hypothetical protein, DegV family [Oenococcus oeni ATCC BAA-1163]
Length = 277
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 101/275 (36%), Positives = 164/275 (59%), Gaps = 7/275 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
IKIVTDS+ + + KE IT+VPL + + + D D+ EF R ++ S++ P+TS
Sbjct: 2 IKIVTDSTAQLTEDELKEYKITVVPLQISLRKQILLDGVDISRSEFSRELKESKDFPRTS 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAM 122
QP +G F V+D L +DG+ +ISIHMS LSGTV AR+ L + DVTVVDS F D+++
Sbjct: 62 QPSIGQFKSVYDDLGKDGSTVISIHMSEVLSGTVNVAREANKLTSTDVTVVDSGFTDRSL 121
Query: 123 KFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLL 182
F V EAAK+A++G EI+ ++ K T L+ +++L+ VKGGR R G SSL+
Sbjct: 122 AFLVIEAAKMAQQGKSKTEILDQLAVKKTTTHLFCFINSLDYFVKGGRASRAIGFFSSLI 181
Query: 183 NIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQ-VAELGISYAGSPELAQEMK 241
+++++ M+ ++L+ + K RG F++ ++ + ++ N + + ++G+SY S E +
Sbjct: 182 KLKLVLTMEGNKLKVVSKCRGQARFQQIINKMVDSVMNSRGITQVGLSYVDSDEEVSRIA 241
Query: 242 ESLQPYVKKP---ISVLETGSIIQTHTGENAWAVL 273
L K+P I T II +H G +A++
Sbjct: 242 NFLHE--KRPDLKIVTRLTSPIIMSHVGPKGFALM 274
>gi|116491200|ref|YP_810744.1| hypothetical protein OEOE_1185 [Oenococcus oeni PSU-1]
gi|116091925|gb|ABJ57079.1| hypothetical protein OEOE_1185 [Oenococcus oeni PSU-1]
Length = 277
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 101/275 (36%), Positives = 164/275 (59%), Gaps = 7/275 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
IKIVTDS+ + + KE IT+VPL + + + D D+ EF R ++ S++ P+TS
Sbjct: 2 IKIVTDSTAQLTEDELKEYKITVVPLQISLRKQILLDGVDISRSEFSRELKESKDFPRTS 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAM 122
QP +G F V+D L +DG+ +ISIHMS LSGTV AR+ L + DVTVVDS F D+++
Sbjct: 62 QPSIGQFKSVYDDLGKDGSTVISIHMSEVLSGTVNVAREANKLTSTDVTVVDSGFTDRSL 121
Query: 123 KFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLL 182
F V EAAK+A++G EI+ ++ K T L+ +++L+ VKGGR R G SSL+
Sbjct: 122 AFLVIEAAKMAQQGKCKTEILDQLAVKKTTTHLFCFINSLDYFVKGGRASRAIGFFSSLI 181
Query: 183 NIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQ-VAELGISYAGSPELAQEMK 241
+++++ M+ ++L+ + K RG F++ ++ + ++ N + + ++G+SY S E +
Sbjct: 182 KLKLVLTMEGNKLKVVSKCRGQARFQQIINKMVDSVVNSRGITQVGLSYVDSDEEVSRIA 241
Query: 242 ESLQPYVKKP---ISVLETGSIIQTHTGENAWAVL 273
L K+P I T II +H G +A++
Sbjct: 242 NFLHE--KRPDLKIVTRLTSPIIMSHVGPKGFALM 274
>gi|90961152|ref|YP_535068.1| DegV family protein [Lactobacillus salivarius subsp. salivarius
UCC118]
gi|90820346|gb|ABD98985.1| DegV family protein [Lactobacillus salivarius subsp. salivarius
UCC118]
Length = 287
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 107/280 (38%), Positives = 171/280 (61%), Gaps = 8/280 (2%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M IKI+TDSSV + PE ++ +ITIVPLSV VDG Y D D+ E ++ ++ N+P
Sbjct: 1 MANIKILTDSSVQLTPEEIEKYNITIVPLSVEVDGKNYVDGEDISREELVQALKDG-NIP 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPP+G F D ++ L +DG+++++I +S LSGT E A A + + VTV++S D
Sbjct: 60 KTSQPPIGRFIDAYNELGKDGSEVLAIVLSDVLSGTYETASSAADMVDTKVTVINSKSTD 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ + FQV AAK + G ++EI ++++ +T + + + L+ LV GGR+ R++G ++
Sbjct: 120 RGLAFQVLAAAKDLEAGKSIDEIKDHLKDIYHRTTIDVLIDNLDCLVAGGRVSRLAGALT 179
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSAN-LQNKQ-VAELGISYAGSPE-L 236
L+N+++I+++ + L+ IVKGR KTF K L+ LQN + L +S G+ + L
Sbjct: 180 KLINLKLIIRLNEESLDVIVKGRSKKTFIKHCKTLAEEYLQNHNPIQALSLSNVGTDDSL 239
Query: 237 AQEMKESL---QPYVKKPISVLETGSIIQTHTGENAWAVL 273
Q++K++L + P T II THTG NA V+
Sbjct: 240 LQKIKDTLLENNSIQEIPYIARLTSPIIMTHTGLNAVGVI 279
>gi|153179928|ref|ZP_01933067.1| hypothetical protein LMMG_00650 [Listeria monocytogenes F6900]
gi|133732103|gb|EBA33801.1| hypothetical protein LMMG_00650 [Listeria monocytogenes F6900]
Length = 221
Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 89/207 (42%), Positives = 140/207 (67%), Gaps = 2/207 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYS-DADLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E A + +I ++ L+V +DG +Y+ D+ EF+ M ++ LP
Sbjct: 1 MRKIKIITDSTAGLTLEEAAKWNIDVLYLTVEIDGQIYNPKTDITPEEFMVRMAETKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
K+SQP +G F + +++ +G +I+SIH++ LSGTV AARQ A + ++TVVD +
Sbjct: 61 KSSQPAIGSFVEAYEKYTAEGYEILSIHLTEKLSGTVNAARQAADMVEGNITVVDCDYTA 120
Query: 120 QAMKFQVTEAAKLAKEGA-DLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ FQV +AA++A+ G +EEI AKI ++++KT+LYI + TL+NL+KGGR+GR+ G +
Sbjct: 121 RGQAFQVLKAAEMAQSGDYSVEEIHAKINDIRDKTKLYIVVVTLDNLIKGGRVGRMQGFL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAK 205
SLLNI++I ++ D QLE K R K
Sbjct: 181 GSLLNIKLIAKLTDGQLEEETKVRSNK 207
>gi|94958287|gb|ABF47275.1| DegV family protein-like protein [Staphylococcus xylosus]
Length = 279
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 89/277 (32%), Positives = 161/277 (58%), Gaps = 4/277 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M K KIVTDS+ + + DI ++PL++ ++G Y D D+ +++ MQ ++
Sbjct: 1 MMKKKIVTDSTSDLSHAYLSDNDIHVIPLNLTINGEAYVDQVDISSEAYIQKMQEDADV- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F +++D L DG++IISIHM+ LSGT + A Q + ++++ VTV+DS I
Sbjct: 60 KTSQPAIGKFIEMYDELGADGSEIISIHMTSGLSGTYQTALQASQMSDSKVTVIDSKSIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ +QV + EG D +I++KI E+++ +LY+ + L L+KGGRI + GLI
Sbjct: 120 FGLGYQVQHIVDWSNEGYDTADIVSKITELQKNIKLYVVIGQLNQLIKGGRISKTKGLIG 179
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWL-DDLSANLQNKQVAELGISYAGSPELAQ 238
+++ I+ I ++D ++E I R ++L ++SA + ++ + +GI++A E
Sbjct: 180 NMMKIKPIGTLEDGKIELIHNSRTQNASVQFLKKEISAFIGDRNIKSIGIAHANIIEFVD 239
Query: 239 EMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVLI 274
++K+ + + T +I THTG+ A +++
Sbjct: 240 KVKKHFSEEFNFTQFDTNVTTPVISTHTGQGAIGLVV 276
>gi|73662623|ref|YP_301404.1| hypothetical protein SSP1314 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495138|dbj|BAE18459.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 279
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 94/279 (33%), Positives = 160/279 (57%), Gaps = 8/279 (2%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M K KIVTDS+ + E E +I ++PL++ +DG Y D D+ E+++ ++ + +
Sbjct: 1 MIKKKIVTDSTSDLSHEYLNENNIHVIPLNLTIDGESYIDQIDISSKEYIQKLEENAD-T 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F +++D L EDG++IISIHM+ LSGT + A Q + + ++ VTV+DS I
Sbjct: 60 KTSQPAIGKFIELYDELGEDGSEIISIHMTSGLSGTYQTALQASEMTDSKVTVIDSKSIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ +QV G EI+ I E+++ +LY+ + L L+KGGRI + GLI
Sbjct: 120 FGLGYQVQHIVDWNNTGLSTNEIVENIVELQKNIKLYVVIGQLNQLIKGGRISKTKGLIG 179
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWL-DDLSANLQNKQVAELGISYAGSPELAQ 238
+++ I+ I ++D ++E I R ++L ++SA + +K V +GI++A E
Sbjct: 180 NMMQIKPIGTLEDGKIELIHNSRTQNASVQFLKKEVSAFIGDKNVKSIGIAHANIIEFVD 239
Query: 239 EMKESLQP---YVKKPISVLETGSIIQTHTGENAWAVLI 274
++K+ + K +V T II THTG+ A +++
Sbjct: 240 KVKKHFSEEFNFTKFDTNV--TTPIISTHTGQGAIGLVV 276
>gi|27468036|ref|NP_764673.1| hypothetical protein SE1118 [Staphylococcus epidermidis ATCC 12228]
gi|57866917|ref|YP_188578.1| DegV family protein [Staphylococcus epidermidis RP62A]
gi|27315581|gb|AAO04715.1|AE016747_212 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637575|gb|AAW54363.1| DegV family protein [Staphylococcus epidermidis RP62A]
Length = 282
Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 82/277 (29%), Positives = 166/277 (59%), Gaps = 4/277 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M K IVTDS+ + E K+ +I ++PLS+ +DG Y+D D+ E++ +++ ++
Sbjct: 1 MAKQIIVTDSTSDLSHEYLKQHNIHVIPLSLTIDGKSYTDQVDISSSEYIDHIENDADV- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPP+G F + +++LA+D +IISIH+S LSGT A Q + + + ++TV+DS I
Sbjct: 60 KTSQPPIGRFIETYEQLAQDDVEIISIHLSSGLSGTYNTAVQASHMVDGNITVIDSKSIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ +Q+ + +L +G EEI+ ++ ++++ +L++ + L L+KGGRI + GLI
Sbjct: 120 FGLGYQIKQIVELISQGTSTEEIVKEMTQLRDNLQLFVVIGQLNQLIKGGRISKTKGLIG 179
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWL-DDLSANLQNKQVAELGISYAGSPELAQ 238
+++ I+ I ++D +LE + R + ++L +++ +++ ++ +GI++A +
Sbjct: 180 NIMKIKPIGTLRDGKLELVHNSRTQNSSVQYLKKEITDFVKDHKIKSIGIAHANVKDFVD 239
Query: 239 EMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVLI 274
++ +S + + + T +I THTG+ A +++
Sbjct: 240 KIIKSFTESFDFSQFDINVTTPVISTHTGQGAIGLVV 276
>gi|82751016|ref|YP_416757.1| hypothetical protein SAB1280c [Staphylococcus aureus RF122]
gi|82656547|emb|CAI80969.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 279
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 87/277 (31%), Positives = 159/277 (57%), Gaps = 4/277 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
MTK IVTDS+ + E + +I ++PLS+ ++G Y D D+ EF+ +++ ++
Sbjct: 1 MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDV- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F ++ L +DGA+IISIH+S LSGT A Q + + +A+VTV+DS I
Sbjct: 60 KTSQPAIGEFISAYEELGKDGAEIISIHLSSGLSGTFNTAYQASQMVDANVTVIDSKSIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ +Q+ +L KEG EI+ K+ ++E +L++ + L L+KGGRI + GLI
Sbjct: 120 FGLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIGQLNQLIKGGRISKTKGLIG 179
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWL-DDLSANLQNKQVAELGISYAGSPELAQ 238
+L+ I+ I + D +LE + R + ++L +++ + + ++ +G+++A E
Sbjct: 180 NLMKIKPIGTLDDGRLELMHNARTQNSSIQYLKKEIAEFIGDHEIKSVGVAHANVIEYVD 239
Query: 239 EMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVLI 274
++K+ + + + T +I HTG+ A +++
Sbjct: 240 KLKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVV 276
>gi|15924415|ref|NP_371949.1| hypothetical protein SAV1425 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927006|ref|NP_374539.1| hypothetical protein SA1258 [Staphylococcus aureus subsp. aureus
N315]
gi|156979744|ref|YP_001442003.1| hypothetical protein SAHV_1413 [Staphylococcus aureus subsp. aureus
Mu3]
gi|54040100|sp|P67371|Y1258_STAAN UPF0230 protein SA1258
gi|54042735|sp|P67370|Y1425_STAAM UPF0230 protein SAV1425
gi|13701223|dbj|BAB42518.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247196|dbj|BAB57587.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|156721879|dbj|BAF78296.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
Length = 279
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 86/277 (31%), Positives = 160/277 (57%), Gaps = 4/277 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
MTK IVTDS+ + E + +I ++PLS+ ++G Y D D+ EF+ +++ ++
Sbjct: 1 MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDV- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F ++ L +DG++IISIH+S LSGT A Q + + +A+VTV+DS I
Sbjct: 60 KTSQPAIGEFISAYEELGKDGSEIISIHLSSGLSGTYNTAYQASQMVDANVTVIDSKSIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
++ +Q+ +L KEG EI+ K+ ++E +L++ + L L+KGGRI + GLI
Sbjct: 120 FSLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIGQLNQLIKGGRISKTKGLIG 179
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWL-DDLSANLQNKQVAELGISYAGSPELAQ 238
+L+ I+ I + D +LE + R + ++L +++ + + ++ +G+++A E
Sbjct: 180 NLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEFIGDHEIKSIGVAHANVIEYVD 239
Query: 239 EMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVLI 274
++K+ + + + T +I HTG+ A +++
Sbjct: 240 KLKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVV 276
>gi|21283044|ref|NP_646132.1| hypothetical protein MW1315 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486266|ref|YP_043487.1| hypothetical protein SAS1368 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650381|ref|YP_186309.1| degV family protein [Staphylococcus aureus subsp. aureus COL]
gi|87162066|ref|YP_494015.1| DegV family protein [Staphylococcus aureus subsp. aureus USA300]
gi|88195157|ref|YP_499958.1| hypothetical protein SAOUHSC_01433 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267912|ref|YP_001246855.1| degV family protein [Staphylococcus aureus subsp. aureus JH9]
gi|150393975|ref|YP_001316650.1| degV family protein [Staphylococcus aureus subsp. aureus JH1]
gi|151221548|ref|YP_001332370.1| hypothetical protein NWMN_1336 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|30179834|sp|Q8NWR0|Y1315_STAAW UPF0230 protein MW1315
gi|81649317|sp|Q6G9D6|Y1368_STAAS UPF0230 protein SAS1368
gi|81694506|sp|Q5HFZ8|Y1460_STAAC UPF0230 protein SACOL1460
gi|21204483|dbj|BAB95180.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244709|emb|CAG43144.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284567|gb|AAW36661.1| degV family protein [Staphylococcus aureus subsp. aureus COL]
gi|87128040|gb|ABD22554.1| DegV family protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202715|gb|ABD30525.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740981|gb|ABQ49279.1| degV family protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946427|gb|ABR52363.1| degV family protein [Staphylococcus aureus subsp. aureus JH1]
gi|150374348|dbj|BAF67608.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
Length = 279
Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats.
Identities = 86/277 (31%), Positives = 159/277 (57%), Gaps = 4/277 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
MTK IVTDS+ + E + +I ++PLS+ ++G Y D D+ EF+ +++ ++
Sbjct: 1 MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDV- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F ++ L +DG++IISIH+S LSGT A Q + + +A+VTV+DS I
Sbjct: 60 KTSQPAIGEFISAYEELGKDGSEIISIHLSSGLSGTYNTAYQASQMVDANVTVIDSKSIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ +Q+ +L KEG EI+ K+ ++E +L++ + L L+KGGRI + GLI
Sbjct: 120 FGLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIGQLNQLIKGGRISKTKGLIG 179
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWL-DDLSANLQNKQVAELGISYAGSPELAQ 238
+L+ I+ I + D +LE + R + ++L +++ + + ++ +G+++A E
Sbjct: 180 NLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEFIGDHEIKSIGVAHANVIEYVD 239
Query: 239 EMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVLI 274
++K+ + + + T +I HTG+ A +++
Sbjct: 240 KLKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVV 276
>gi|49483616|ref|YP_040840.1| hypothetical protein SAR1438 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|81651142|sp|Q6GGY2|Y1438_STAAR UPF0230 protein SAR1438
gi|49241745|emb|CAG40435.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
Length = 279
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 86/277 (31%), Positives = 159/277 (57%), Gaps = 4/277 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
MTK IVTDS+ + E + +I ++PLS+ ++G Y D D+ EF+ +++ ++
Sbjct: 1 MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDV- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F ++ L +DG++IISIH+S LSGT A Q + + +A+VTV+DS I
Sbjct: 60 KTSQPAIGEFISAYEELGKDGSEIISIHLSSGLSGTFNTAYQASQMVDANVTVIDSKSIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ +Q+ +L KEG EI+ K+ ++E +L++ + L L+KGGRI + GLI
Sbjct: 120 FGLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIGQLNQLIKGGRISKTKGLIG 179
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWL-DDLSANLQNKQVAELGISYAGSPELAQ 238
+L+ I+ I + D +LE + R + ++L +++ + + ++ +G+++A E
Sbjct: 180 NLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEFIGDHEIKSVGVAHANVIEYVD 239
Query: 239 EMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVLI 274
++K+ + + + T +I HTG+ A +++
Sbjct: 240 KLKKVFNEAFHVDNYDINVTTPVISAHTGQGAIGLVV 276
>gi|106893512|ref|ZP_01360637.1| DegV [Clostridium sp. OhILAs]
gi|106775248|gb|EAT31807.1| DegV [Clostridium sp. OhILAs]
Length = 274
Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats.
Identities = 87/273 (31%), Positives = 152/273 (55%), Gaps = 5/273 (1%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
++I+TDSS + E+ +E D+ ++PL++ +DG Y D DL EF M S LPKTS
Sbjct: 1 MQIITDSSCDLPKEILEENDVIVIPLNIEIDGKNYVDGVDLTHEEFFDKMSKSEGLPKTS 60
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAM 122
QP + D F + A+ + + IH+S LSGT+ A + + + V DS +
Sbjct: 61 QPSPQSYIDAFKKAAQKTGETLCIHLSSKLSGTMNGALMVREMVESKIEVFDSLSGSLGL 120
Query: 123 KFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLL 182
QV +A ++ KEGA +E I+ K++E++E ++ + L +LEN V+GGR+ RV ++++LL
Sbjct: 121 GMQVLKACEMKKEGATIEHIVDKLKEIREDMKVVVYLESLENAVRGGRVARVKEMVANLL 180
Query: 183 NIRVIMQMKDHQLEPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAGSPELAQEMK 241
N++ ++ +++ ++ + RG K LD ++ + + +GI++ E A +K
Sbjct: 181 NLKAVVHVEEGYVKVLKTIRGKKRAINFMLDQMAEKNTDFKDKIIGITHCDCIEDAMALK 240
Query: 242 ESLQPYVKKPISVLET--GSIIQTHTGENAWAV 272
+ + PI VL T G +I TH+G+ V
Sbjct: 241 DEILKRF-NPIDVLVTTMGPVIGTHSGQGGLLV 272
>gi|70726482|ref|YP_253396.1| hypothetical protein SH1481 [Staphylococcus haemolyticus JCSC1435]
gi|68447206|dbj|BAE04790.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 281
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 81/280 (28%), Positives = 158/280 (56%), Gaps = 4/280 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
MTK IVTDS+ + E K+ +I +VPLS+ +DG + D D+ F++ ++ ++
Sbjct: 1 MTKQIIVTDSTSDLSHEYLKQHNIHVVPLSLTIDGKSFVDQIDITSEAFIQRIEEDADV- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPP+G F ++++ L ++ +I SIHMS LSGT + A Q + + + VTV+DS I
Sbjct: 60 KTSQPPIGKFIELYEELGKEDVEIFSIHMSSGLSGTYQTALQASDMVDTKVTVIDSKSIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ +Q+ +L +I+ K++E+++ +L++ + L L+KGGRI + G I
Sbjct: 120 FGLGYQIQRLVELINTNLSSNQIVNKLKELQKNIKLFVVIGQLNQLIKGGRISKTKGFIG 179
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWL-DDLSANLQNKQVAELGISYAGSPELAQ 238
+++ I+ + ++D LE + R + ++L ++S + ++ +G+++A +
Sbjct: 180 NIMKIKPVGTLEDGYLEIVHNARTQNSSIQYLKKEISEFIDKHKIKSIGVAHANVLDFVD 239
Query: 239 EMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
++K + + ++ V T +I THTG+ A +++ E
Sbjct: 240 KLKLQFDEAFGQQKYDVNVTTPVISTHTGQGAIGLVVVRE 279
>gi|30023231|ref|NP_834862.1| DegV family protein [Bacillus cereus ATCC 14579]
gi|29898791|gb|AAP12063.1| DegV family protein [Bacillus cereus ATCC 14579]
Length = 280
Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 93/273 (34%), Positives = 147/273 (53%), Gaps = 8/273 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
KI IVTDS+ I ++ EL+I ++PL+V+ Y + A++ +F ++ LPKT
Sbjct: 2 KIAIVTDSTAYIPKQIRDELNIYMIPLNVVFGTESYQEEAEISADDFYVKVREQEELPKT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQ-GATLANADVTVVDSSFIDQ 120
SQP +G F ++++ LA+D +ISIH+S +SGT + + G + DV DS +
Sbjct: 62 SQPAIGKFVELYEELAKDYDAVISIHLSSGISGTYQTSTTAGQMVEGIDVYTYDSEISCE 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F V E AKLA EG + +EIIA+ +E+K+ + Y + L +L +GGR+ I S
Sbjct: 122 VQGFYVREGAKLASEGKNPKEIIARFDEMKKTMDAYFVVDDLHHLQRGGRLNSAQAFIGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVA-ELGISYAGSPELAQE 239
LL ++ ++ +D + P K R K K + ++ +K V E I +A E A E
Sbjct: 182 LLQVKPVLYFRDKIIIPFEKIRTRKKALKRIIEIFDEQASKGVPMEAVIIHAQREEEANE 241
Query: 240 MKESLQPYVKKPISVLET---GSIIQTHTGENA 269
K+ L+ K P + T G++I TH GE A
Sbjct: 242 WKKELE--AKYPHVTIRTGYFGAVIGTHLGEGA 272
>gi|75759036|ref|ZP_00739144.1| DegV family protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74493502|gb|EAO56610.1| DegV family protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 314
Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 92/273 (33%), Positives = 147/273 (53%), Gaps = 8/273 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
KI IVTDS+ I ++ EL+I ++PL+V+ Y + A++ +F ++ LPKT
Sbjct: 36 KIAIVTDSTAYIPKQIRDELNIYMIPLNVVFGTESYQEEAEISADDFYVKVREQEELPKT 95
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQ-GATLANADVTVVDSSFIDQ 120
SQP +G F ++++ LA+D +ISIH+S +SGT + + G + DV DS +
Sbjct: 96 SQPAIGKFVELYEELAKDYDAVISIHLSSGISGTYQTSTTAGQMVEGIDVYTYDSEISCE 155
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F V E AKLA EG + +EIIA+ +E+K+ + Y + L +L +GGR+ I S
Sbjct: 156 VQGFYVREGAKLASEGKNPKEIIARFDEMKKTMDAYFVVDDLHHLQRGGRLNSAQAFIGS 215
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVA-ELGISYAGSPELAQE 239
LL ++ ++ ++ + P K R K K + ++ +K V E I +A E A E
Sbjct: 216 LLQVKPVLYFRNKIIIPFEKIRTRKKALKRIIEIFDEQASKGVPMEAVIIHAQREEEANE 275
Query: 240 MKESLQPYVKKPISVLET---GSIIQTHTGENA 269
K+ L+ K P + T G++I TH GE A
Sbjct: 276 WKKELE--AKYPHVTIRTGYFGAVIGTHLGEGA 306
>gi|16801719|ref|NP_471987.1| hypothetical protein lin2658 [Listeria innocua Clip11262]
gi|30179850|sp|Q927X9|Y2658_LISIN UPF0230 protein lin2658
gi|16415194|emb|CAC97884.1| lin2658 [Listeria innocua]
Length = 283
Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats.
Identities = 90/274 (32%), Positives = 147/274 (53%), Gaps = 9/274 (3%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLPKT 61
KI +VTDS+ + EV ++L I +VPLSV++DG Y + + L +F + ++ + N P +
Sbjct: 4 KIAVVTDSTTYLPDEVKEQLRINVVPLSVIIDGKSYREGEELSTADFYKKVKEAENFPTS 63
Query: 62 SQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVE-AARQGATLANADVTVVDSSFID 119
SQP G F +F++L E G +ISIH+S +SGT + AA G + +V DS
Sbjct: 64 SQPAPGEFIQLFEKLKEQGFDTVISIHLSSGISGTFQNAASAGELIDGLNVVAYDSELSC 123
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A +AA++A LE II++++++K+ + Y + L NL +GGR+ L+
Sbjct: 124 MAQGMFAVKAAEMALANEPLERIISELDKIKKAQDAYFMVDDLNNLQRGGRLNGAQALVG 183
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDD-LSANLQNKQVAELGISYAGSPELAQ 238
SLL I+ I+ D Q+ K R K K ++D L ++NK + + + PE +
Sbjct: 184 SLLQIKPILHFNDKQIVLFEKVRTQKKALKRIEDILEVAIKNKNAEKAYVIHGNDPEKGE 243
Query: 239 EMKESLQ---PYVKKPISVLETGSIIQTHTGENA 269
++ L+ P V+ +S G +I TH GE A
Sbjct: 244 TWRKHLESKFPEVEFELSYF--GPVIGTHLGEGA 275
>gi|15616189|ref|NP_244494.1| hypothetical protein BH3627 [Bacillus halodurans C-125]
gi|30179760|sp|Q9K6U8|Y3627_BACHD UPF0230 protein BH3627
gi|10176251|dbj|BAB07346.1| BH3627 [Bacillus halodurans C-125]
Length = 283
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 96/279 (34%), Positives = 150/279 (53%), Gaps = 15/279 (5%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
MTKI IVTDS+ + P+ AKEL + +VPLSV+ Y + +L +F ++ LP
Sbjct: 1 MTKIAIVTDSTAYLGPKRAKELGVIVVPLSVVFGEEAYQEEVELSSADFYEKLKHEEKLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQI-ISIHMSHALSGTVEAA-RQGATLANADVTVVDSSF 117
TSQP VG+F + F+RLA++G ++ ISIH+S +SGT ++A G+ + +V DS
Sbjct: 61 TTSQPAVGLFVETFERLAKEGFEVVISIHLSSKISGTYQSALTAGSMVEGIEVIGYDSGI 120
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
+ V EAAKL KEGAD + II ++EVK++T + L +L +GGR+ +
Sbjct: 121 SCEPQANFVAEAAKLVKEGADPQTIIDHLDEVKKRTNALFVVHDLSHLHRGGRLNAAQLV 180
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKW-------LDDLSANLQNKQVAELGISY 230
+ SLL I+ I+ +D + P+ K R K K W ++ S+ K
Sbjct: 181 VGSLLKIKPILHFEDGSIVPLEKVRTEK--KAWARVKELFAEEASSASSVKATVIHANRL 238
Query: 231 AGSPELAQEMKESLQPYVKKPISVLETGSIIQTHTGENA 269
G+ +LA E++ + +S+ G +I TH GE +
Sbjct: 239 DGAEKLADEIRSQ---FSHVDVSISHFGPVIGTHLGEGS 274
>gi|116333471|ref|YP_794998.1| hypothetical protein LVIS_0824 [Lactobacillus brevis ATCC 367]
gi|116098818|gb|ABJ63967.1| hypothetical protein LVIS_0824 [Lactobacillus brevis ATCC 367]
Length = 288
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 90/278 (32%), Positives = 149/278 (53%), Gaps = 8/278 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLPKT 61
KI +VTDS+ + E + I +VP+ V++DG Y D D+ EF +++S++ P T
Sbjct: 2 KIAVVTDSTCYLSAEEVERYHIHVVPIPVIIDGRSYDEDVDITTSEFYDRLRNSKSFPST 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFID 119
SQPP+G +++D+LA++G +ISIH++ +SG V + A T+ N V DS
Sbjct: 62 SQPPLGEMINLYDQLADEGYDAVISIHLASTISGFVNQLKTLAPTIDNIRVIPYDSQITV 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ M + EAAK+A +GA+ E IIA++++++ Y + L+NLV+GGR+ S I
Sbjct: 122 KLMGYLAIEAAKMAADGAEPEAIIARMDDLRSTIGEYFVVDDLQNLVRGGRLSNASAFIG 181
Query: 180 SLLNIRVIMQMKD--HQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELG--ISYAGSPE 235
S+L I+ ++ D H++ K R K ++DL Q++ L + A PE
Sbjct: 182 SVLRIKPLLTFDDDTHEIVAFEKVRSRKKALARVEDLFVQAQSQVDYPLRALVINANDPE 241
Query: 236 LAQEMKESLQP-YVKKPISVLETGSIIQTHTGENAWAV 272
Q + + Y + P+ G +I H GE A A+
Sbjct: 242 AGQTWADKIATQYPEIPVEQSYFGPVIGAHLGEKALAL 279
>gi|671632|emb|CAA78911.1| unknown [Staphylococcus aureus]
Length = 194
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 118/193 (61%), Gaps = 2/193 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
MTK IVTDS+ + E + +I ++PLS+ ++G Y D D+ EF+ +++ ++
Sbjct: 1 MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDV- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP +G F ++ L +DG++IISIH+S LSGT A Q + + +A+VTV+DS I
Sbjct: 60 KTSQPAIGEFISAYEELGKDGSEIISIHLSSGLSGTFNTAYQASQMVDANVTVIDSKSIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ +Q+ +L KEG EI+ K+ ++E +L++ + L L+KGGRI + GLI
Sbjct: 120 FGLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIGQLNQLIKGGRISKTKGLIG 179
Query: 180 SLLNIRVIMQMKD 192
+L+ I+ I + D
Sbjct: 180 NLMKIKPIGTLDD 192
>gi|89205061|ref|ZP_01183634.1| DegV [Bacillus weihenstephanensis KBAB4]
gi|89157075|gb|EAR77070.1| DegV [Bacillus weihenstephanensis KBAB4]
Length = 280
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 4/271 (1%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
K IVTDS+ I + EL+I ++PL+V+ Y + A++ +F ++ LPKT
Sbjct: 2 KTAIVTDSTAYIPKHIRDELNIYMIPLNVVFGTESYQEEAEVSANDFYIKVREQEELPKT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANA-DVTVVDSSFIDQ 120
SQP +G F ++++ L+++ +ISIH+S +SGT + A + + DV DS +
Sbjct: 62 SQPAIGKFLELYEELSKEYDAVISIHLSSGISGTYQTATAAGQMVDGIDVYTYDSEISCE 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F V E AKL EG EEIIA+ +E+K+ + Y + L +L +GGR+ I S
Sbjct: 122 VQGFYVREGAKLVSEGKAPEEIIARFDEMKQTMDAYFVVDDLHHLQRGGRLNSAQAFIGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVA-ELGISYAGSPELAQE 239
LL ++ ++ +D + P K R K K + ++ NK V E I +A E A E
Sbjct: 182 LLQVKPVLYFRDKVIIPFEKIRTRKKALKRIVEIFDEQANKGVPMEAVIIHANREEEANE 241
Query: 240 MKESLQP-YVKKPISVLETGSIIQTHTGENA 269
K+ L+ Y I G++I TH GE A
Sbjct: 242 WKQELEEIYPHVTIRTSYFGAVIGTHLGEGA 272
>gi|30265221|ref|NP_847598.1| degV family protein [Bacillus anthracis str. Ames]
gi|47530743|ref|YP_022092.1| degv family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49188031|ref|YP_031284.1| degV family protein [Bacillus anthracis str. Sterne]
gi|49481151|ref|YP_039184.1| degV family protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|65317167|ref|ZP_00390126.1| COG1307: Uncharacterized protein conserved in bacteria [Bacillus
anthracis str. A2012]
gi|118480232|ref|YP_897383.1| degV family protein [Bacillus thuringiensis str. Al Hakam]
gi|30259898|gb|AAP29084.1| degV family protein [Bacillus anthracis str. Ames]
gi|47505891|gb|AAT34567.1| degV family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49181958|gb|AAT57334.1| degV family protein [Bacillus anthracis str. Sterne]
gi|49332707|gb|AAT63353.1| degV family protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|118419457|gb|ABK87876.1| degV family protein [Bacillus thuringiensis str. Al Hakam]
Length = 280
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 91/273 (33%), Positives = 145/273 (53%), Gaps = 8/273 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
K IVTDS+ I + EL+I ++PL+V+ Y + A++ +F ++ LPKT
Sbjct: 2 KTAIVTDSTAYIPKHIRDELNIYMIPLNVVFGTESYQEEAEISADDFYVKVREQEELPKT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQ-GATLANADVTVVDSSFIDQ 120
SQP +G F ++++ L++D +ISIH+S +SGT + + G + DV DS +
Sbjct: 62 SQPAIGKFVELYEELSKDYDAVISIHLSSGISGTYQTSTTAGQMVEGIDVYTYDSEISCE 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F V E A+LA EG D +EIIA+ +E+K+ + Y + L +L +GGR+ I S
Sbjct: 122 VQGFYVREGARLASEGKDPKEIIARFDEMKKTMDAYFVVDDLHHLQRGGRLNSAQAFIGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVA-ELGISYAGSPELAQE 239
LL ++ ++ +D + P K R K K + ++ +K V E I +A E A E
Sbjct: 182 LLQVKPVLYFRDKIIIPFEKIRTRKKALKRIIEIFDEQASKGVPMEAVIIHAQREEEANE 241
Query: 240 MKESLQPYVKKPISVLET---GSIIQTHTGENA 269
K+ L+ K P + T G++I TH GE A
Sbjct: 242 WKKELE--AKYPHVTIRTGYFGAVIGTHLGEGA 272
>gi|42784349|ref|NP_981596.1| degV family protein [Bacillus cereus ATCC 10987]
gi|42740280|gb|AAS44204.1| degV family protein [Bacillus cereus ATCC 10987]
Length = 280
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 92/273 (33%), Positives = 144/273 (52%), Gaps = 8/273 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
K IVTDS+ I + EL+I ++PL+V+ Y + A++ +F ++ LPKT
Sbjct: 2 KTAIVTDSTAYIPKHIRDELNIYMIPLNVVFGTESYQEEAEISADDFYVKVREQEELPKT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQ-GATLANADVTVVDSSFIDQ 120
SQP +G F ++++ L++D +ISIH+S +SGT + + G + DV DS +
Sbjct: 62 SQPAIGKFVELYEELSKDYDAVISIHLSSGISGTYQTSTTAGQMVEGIDVYTYDSEISCE 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F V E AKLA EG D +EIIA+ +E+K+ + Y + L +L +GGR+ I S
Sbjct: 122 VQGFYVREGAKLASEGKDPKEIIARFDEMKKTMDAYFVVDDLHHLQRGGRLNSAQAFIGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVA-ELGISYAGSPELAQE 239
LL ++ ++ +D + P K R K K + ++ +K V E I +A E A E
Sbjct: 182 LLQVKPVLYFRDKIIIPFEKIRTRKKALKRIIEIFDEQASKGVPMEAVIIHAQREEEANE 241
Query: 240 MKESLQPYVKKPISVLET---GSIIQTHTGENA 269
K L+ K P + T G++I TH GE A
Sbjct: 242 WKAELE--AKYPHVTIRTGYFGAVIGTHLGEGA 272
>gi|126652485|ref|ZP_01724657.1| degV family protein [Bacillus sp. B14905]
gi|126590756|gb|EAZ84871.1| degV family protein [Bacillus sp. B14905]
Length = 280
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 91/273 (33%), Positives = 142/273 (52%), Gaps = 8/273 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
+ IVTDS+ E L+I ++PLSV + G ++++ D+ EF ++ ++ PKT
Sbjct: 2 RTAIVTDSTAYNTAEERARLNIHMIPLSVNISGQLFAEEVDITASEFYDKVRGAKEFPKT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQ-GATLANADVTVVDSSFIDQ 120
+QPP+G F +FD LA+D ++ISIH+S +SGT + A Q G + DV DS
Sbjct: 62 TQPPIGEFVALFDELAKDYDEVISIHLSSGISGTYQGAVQAGEMVEGIDVYAFDSEISCA 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F V AA++AKEG +EI+A + ++++ Y + L +L +GGR+ + LI
Sbjct: 122 VQGFYVLRAAEMAKEGYSAKEILAALADMQQYIRAYFIVDDLAHLQRGGRLSSAAALIGG 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGS-PELAQE 239
LL ++ ++ D + P K R K K ++L A K A + G+ P AQE
Sbjct: 182 LLQVKPVLHFVDKVIVPFEKIRTRKKALKRAEELLAEDAKKYDAMDAVVIHGNCPAEAQE 241
Query: 240 MKESLQ---PYVKKPISVLETGSIIQTHTGENA 269
E L P V +S G +I TH GE +
Sbjct: 242 WLEQLAATYPNVNFKLSYF--GPVIGTHLGEGS 272
>gi|149182538|ref|ZP_01861010.1| degV family protein [Bacillus sp. SG-1]
gi|148849730|gb|EDL63908.1| degV family protein [Bacillus sp. SG-1]
Length = 281
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 92/271 (33%), Positives = 145/271 (53%), Gaps = 4/271 (1%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLPKT 61
K IVTDS+ I E+ +I ++PLSV++ G Y + D+ EF + + LP T
Sbjct: 2 KTAIVTDSTAYIPKELRDRYNIKMIPLSVILGGETYREEIDITASEFYEEVVNEEKLPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANA-DVTVVDSSFIDQ 120
SQPP+G F ++++ LA+D +ISIH+S +SGT + A Q + + +V DS
Sbjct: 62 SQPPLGSFVELYEDLAKDYDAVISIHLSSGISGTYQGAIQAGDMVDGIEVYAYDSEISCM 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F AA+LA EG D +EII K++E+KE + Y + L +L +GGR+ +I S
Sbjct: 122 VQGFYPIYAARLASEGVDPQEIIRKLDEMKESVKAYFMVDDLVHLQRGGRLSAAQAIIGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
LL ++ ++ ++ + P K R K K+ +D L ++Q ++ I +A E A++
Sbjct: 182 LLQVKPLLHFQEKVIVPFEKIRTRKKAMKRIVDLLDKDIQKGDPLQVVIIHANREEEAEK 241
Query: 240 MKESL-QPYVKKPISVLETGSIIQTHTGENA 269
KE L Q Y V G +I TH GE +
Sbjct: 242 WKEELQQKYPDTDFMVSYFGPVIGTHLGEGS 272
>gi|28378468|ref|NP_785360.1| DegV family protein [Lactobacillus plantarum WCFS1]
gi|28271304|emb|CAD64209.1| DegV family protein [Lactobacillus plantarum WCFS1]
Length = 289
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 88/278 (31%), Positives = 147/278 (52%), Gaps = 8/278 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
KI +VTDS+ + P+ + DI +VP+ V++DG VY + D++ +F M+S ++ P T
Sbjct: 2 KIAVVTDSTSYLTPQEVADNDIHVVPIPVIIDGKVYQEGVDIKTADFYANMKSFKSFPST 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLA-NADVTVVDSSFID 119
SQPPVG ++RL E G +ISIH++ +SG + + N + DS
Sbjct: 62 SQPPVGEMVAFYNRLGEQGYDAVISIHLASTISGFYNSLMNMRDMVDNIKLYPYDSQITV 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ M + EAA++AK G +EEI+A++++++ Y + L+NLV+GGR+ S I
Sbjct: 122 RLMGYLAIEAARMAKAGHSVEEILARLDDLRASMGEYFIVDDLQNLVRGGRLSNASAFIG 181
Query: 180 SLLNIRVIMQMKD--HQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELG--ISYAGSPE 235
S+L I+ ++ D H++ K R K ++ L A Q+K L I +
Sbjct: 182 SVLRIKPLLTFDDQSHEIVAFEKVRSTKKALARVEHLFAEAQSKVDYPLRAIIVQGNNLA 241
Query: 236 LAQEMKESLQP-YVKKPISVLETGSIIQTHTGENAWAV 272
A++ K+ LQ Y PI + G +I H G+ + A+
Sbjct: 242 AAEDWKQKLQQIYPDMPIDITYFGPVIGAHLGDKSLAL 279
>gi|56964073|ref|YP_175804.1| hypothetical protein ABC2308 [Bacillus clausii KSM-K16]
gi|56910316|dbj|BAD64843.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 286
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 102/273 (37%), Positives = 151/273 (55%), Gaps = 8/273 (2%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M K+KIVTDS+ I EVA+ IT++PL+V + D L F +Q + +P
Sbjct: 1 MEKVKIVTDSTADIPKEVAEAHGITVIPLNVHFGNEQFEDGVTLTPPAFYEKLQQASEMP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGA-QIISIHMSHALSGTVEAA--RQGATLANADVTVVDSS 116
KTSQP F +++ LA DGA +I+SIH+S +SGT++AA + + DV V DS
Sbjct: 61 KTSQPSPNQFEELYRSLANDGAKEIMSIHLSAKMSGTLQAALIAKESLKGELDVHVYDSK 120
Query: 117 FIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSG 176
A+ V E AKLA +GA L E + EE+ E T +Y + TLE L K GRIG+ S
Sbjct: 121 RASYAIGIIVVEVAKLAAKGATLAECQKRFEELLELTTVYFLVDTLEFLEKNGRIGKASA 180
Query: 177 LISSLLNIRVIMQM-KDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSP 234
LI +LL ++ ++ + +D ++ K RG K K L L NK V +GIS+A +
Sbjct: 181 LIGTLLKMKPLLSLSEDGEVYAKEKVRGQKKAIAKMLALLEEAYGNKNV-HVGISHAVNE 239
Query: 235 ELAQEMKESLQPYVK-KPISVLETGSIIQTHTG 266
LA E+ ++ + + ++V E G++I H G
Sbjct: 240 TLANELANEVKARFQVQSLTVTEIGAVIGAHVG 272
>gi|52140370|ref|YP_086460.1| degV family protein [Bacillus cereus E33L]
gi|51973839|gb|AAU15389.1| degV family protein [Bacillus cereus E33L]
Length = 280
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 91/273 (33%), Positives = 144/273 (52%), Gaps = 8/273 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
K IVTDS+ I + EL+I ++PL+V+ Y + A++ F ++ LPKT
Sbjct: 2 KTAIVTDSTAYIPKHIRDELNIYMIPLNVVFGTESYQEEAEISADNFYVKVREQEELPKT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQ-GATLANADVTVVDSSFIDQ 120
SQP +G F ++++ L++D +ISIH+S +SGT + + G + DV DS +
Sbjct: 62 SQPAIGKFVELYEELSKDYDAVISIHLSSGISGTYQTSTTAGQMVEGIDVYTYDSEISCE 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F V E A+LA EG D +EIIA+ +E+K+ + Y + L +L +GGR+ I S
Sbjct: 122 VQGFYVREGARLASEGKDPKEIIARFDEMKKTMDAYFVVDDLHHLQRGGRLNSAQAFIGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVA-ELGISYAGSPELAQE 239
LL ++ ++ +D + P K R K K + ++ +K V E I +A E A E
Sbjct: 182 LLQVKPVLYFRDKIIIPFEKIRTRKKALKRIIEIFDEQASKGVPMEAVIIHAQREEEANE 241
Query: 240 MKESLQPYVKKPISVLET---GSIIQTHTGENA 269
K+ L+ K P + T G++I TH GE A
Sbjct: 242 WKKELEE--KYPHVTIRTGYFGAVIGTHLGEGA 272
>gi|47567409|ref|ZP_00238122.1| DegV family protein [Bacillus cereus G9241]
gi|47568479|ref|ZP_00239179.1| DegV family protein [Bacillus cereus G9241]
gi|47569303|ref|ZP_00239988.1| DegV family protein [Bacillus cereus G9241]
gi|47554074|gb|EAL12440.1| DegV family protein [Bacillus cereus G9241]
gi|47554870|gb|EAL13221.1| DegV family protein [Bacillus cereus G9241]
gi|47556030|gb|EAL14368.1| DegV family protein [Bacillus cereus G9241]
Length = 280
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 91/273 (33%), Positives = 143/273 (52%), Gaps = 8/273 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
K IVTDS+ I + EL+I ++PL+V+ Y + A++ +F ++ LPKT
Sbjct: 2 KTAIVTDSTAYIPKHIRDELNIYMIPLNVVFGTESYQEEAEISADDFYVKVREQEELPKT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQ-GATLANADVTVVDSSFIDQ 120
SQP +G F ++++ L++D +ISIH+S +SGT + A G + DV DS +
Sbjct: 62 SQPAIGKFVELYEELSKDYDAVISIHLSSGISGTYQTATTAGQMVEGIDVYTYDSEISCE 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F V E A+LA EG D +EII + +E+K+ + Y + L +L +GGR+ I S
Sbjct: 122 VQGFYVREGARLASEGQDPKEIITRFDEMKKTMDAYFVVDDLHHLQRGGRLNSAQAFIGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVA-ELGISYAGSPELAQE 239
LL ++ ++ +D + P K R K K + ++ +K V E I +A E A E
Sbjct: 182 LLQVKPVLYFRDKIIIPFEKIRTRKKALKRIIEIFDEQASKGVPMEAVIIHAQREEEANE 241
Query: 240 MKESLQPYVKKPISVLET---GSIIQTHTGENA 269
K L+ K P + T G++I TH GE A
Sbjct: 242 WKAELE--AKYPHVTIRTGYFGAVIGTHLGEGA 272
>gi|89211644|ref|ZP_01189998.1| DegV [Halothermothrix orenii H 168]
gi|89158759|gb|EAR78453.1| DegV [Halothermothrix orenii H 168]
Length = 299
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 81/284 (28%), Positives = 162/284 (57%), Gaps = 12/284 (4%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
K+ I+TDS+ + ++ K+ +I ++PL++ ++ + ++ +F ++++ + T
Sbjct: 2 KVGILTDSTCDLSEDILKQHNIEMIPLTIHFGEEIFKERYEITPAQFFERLENTEIISTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANA-DVTVVDSSFIDQ 120
SQP +G+F D + ++AE+ IISIH+S SGTVE+AR + + + V+DS I
Sbjct: 62 SQPSIGLFVDKYKKMAEEYDAIISIHLSSKFSGTVESARIASQQVDGIKIEVIDSKSISL 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
+ +Q AAKL + G +EI+ +++ +E ++Y ++ L L KGGRIG+ I S
Sbjct: 122 GLGYQALLAAKLIEAGFSFKEIVDMVKKAREHVDIYFTVNDLSYLEKGGRIGKAQAFIGS 181
Query: 181 LLNIRVIMQM--KDHQLEPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
+LN+ ++ + D ++ P+ K RG+K KK + +L+N++ A +G+ + +
Sbjct: 182 ILNVYPLLAIPGTDGEIIPLEKVRGSKRIIKKLVSRALDSLKNEKYAWIGLVHGADKDSF 241
Query: 238 QEMKESL--QPYVKKPISV--LETG---SIIQTHTGENAWAVLI 274
++ ++L Q Y+K+ + ++TG SII H G + + +++
Sbjct: 242 NKLNKNLTNQKYIKERADLYQIDTGWISSIIGCHAGPSVYGIVL 285
>gi|90961852|ref|YP_535768.1| DegV family protein [Lactobacillus salivarius subsp. salivarius
UCC118]
gi|90821046|gb|ABD99685.1| DegV family protein [Lactobacillus salivarius subsp. salivarius
UCC118]
Length = 310
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 96/280 (34%), Positives = 154/280 (55%), Gaps = 12/280 (4%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
KI +VTDS+ +EPEVA++ I +VP+ ++D VY++ D+ EF +++S + P T
Sbjct: 22 KIAVVTDSTAYLEPEVAEQYGIKVVPIPFIIDNKVYNEGIDITTEEFYSKLKTSESFPST 81
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSG---TVEAARQGATLANADVTVVDSSF 117
SQP +G +++ L +G +ISIH++ +SG T+E R+ T N DV DS
Sbjct: 82 SQPAIGELINLYTSLGNEGYDAVISIHLAGTISGLVQTIENIREQVT--NIDVIPFDSKI 139
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
+ M AAK+A+ G D++EII+ +E ++ + Y + L+NLV+GGR+ S
Sbjct: 140 TVRLMGNLAIAAAKMAQAGKDVDEIISTLESLRSTIKEYFVVDDLQNLVRGGRLSNASAF 199
Query: 178 ISSLLNIRVIMQMKDHQLEPIV--KGRGAKTFKKWLDDL-SANLQNKQVA-ELGISYAGS 233
I S+L I+ I+ D + + K R K K ++DL N++++ L + +A +
Sbjct: 200 IGSVLKIKPILTFDDESDKIVAFDKVRSTKRALKRVEDLFEENIKDRSYPLRLIVFHANN 259
Query: 234 PELAQEMKESLQ-PYVKKPISVLETGSIIQTHTGENAWAV 272
E+A E K LQ Y PI V G +I TH GE A+
Sbjct: 260 EEMAMEWKAKLQEKYPDYPIDVSYFGPVIGTHLGEKELAL 299
>gi|46908686|ref|YP_015075.1| DegV family protein [Listeria monocytogenes str. 4b F2365]
gi|47093716|ref|ZP_00231468.1| DegV family protein [Listeria monocytogenes str. 4b H7858]
gi|153168621|ref|ZP_01928444.1| hypothetical protein LMHG_01563 [Listeria monocytogenes FSL N1-017]
gi|153204100|ref|ZP_01944950.1| hypothetical protein LMSG_02288 [Listeria monocytogenes HPB2262]
gi|46881958|gb|AAT05252.1| DegV family protein [Listeria monocytogenes str. 4b F2365]
gi|47017910|gb|EAL08691.1| DegV family protein [Listeria monocytogenes str. 4b H7858]
gi|133726184|gb|EBA27882.1| hypothetical protein LMHG_01563 [Listeria monocytogenes FSL N1-017]
gi|133734332|gb|EBA36030.1| hypothetical protein LMSG_02288 [Listeria monocytogenes HPB2262]
Length = 283
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 92/273 (33%), Positives = 142/273 (52%), Gaps = 7/273 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLPKT 61
KI +VTDS+ + EV ++L I +VPLSV++DG Y + + L +F R ++ + N P +
Sbjct: 4 KIAVVTDSTTYLPNEVKEQLRINVVPLSVIIDGKSYREGEELSAADFYRKVKEAENFPTS 63
Query: 62 SQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVE-AARQGATLANADVTVVDSSFID 119
SQP G F +F++L E G +ISIH+S +SGT + AA G + +V DS
Sbjct: 64 SQPAPGDFIHLFEQLKEQGFDTVISIHLSSGISGTFQNAASAGELIEGLNVVAYDSELSC 123
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A V +AA++A L++II K++++K+ + Y + L NL +GGR+ L+
Sbjct: 124 MAQGMFVVKAAEMALANEPLDQIIQKLDKIKQAQDAYFMVDDLNNLQRGGRLNGAQALVG 183
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLL I+ I+ D Q+ K R K K ++D+ + AE G+ +LA+
Sbjct: 184 SLLQIKPILHFNDKQIVLFEKVRTQKKALKRIEDILQKAVQNKTAEKAYVIHGN-DLAKG 242
Query: 240 MKESLQPYVKKPISVLET---GSIIQTHTGENA 269
Q K P E G +I TH GE A
Sbjct: 243 EAWLAQLEAKFPEVTFELSYFGPVIGTHLGEGA 275
>gi|56421684|ref|YP_149002.1| hypothetical protein GK3149 [Geobacillus kaustophilus HTA426]
gi|56381526|dbj|BAD77434.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 281
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 90/274 (32%), Positives = 142/274 (51%), Gaps = 9/274 (3%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLPKT 61
K IVTDS+ + EV + L I ++PLSV+ Y + D+ EF ++ LP T
Sbjct: 2 KTAIVTDSTAYLPKEVRERLGIRLIPLSVIFGNETYREEIDMTADEFFAKIKQHPTLPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANA-DVTVVDSSFID 119
SQP VG F D+F + E+G + ++SIH+S +SGT + A T+ + V DS
Sbjct: 62 SQPSVGEFVDLFTAIREEGYEAVVSIHLSSGISGTYQGAVTAGTMVDGLRVYAYDSEISC 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A F EAA++A+ G E+IIA+++E+K+ Y + L +L +GGR+ I
Sbjct: 122 MAQGFYAIEAAEMAQAGRSPEDIIARLDEMKQTLRAYFMVDDLAHLQRGGRLTGAQAFIG 181
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVA-ELGISYAGSPELAQ 238
LL I+ +++ ++ + P K R K +++L A K V + I +A P+ A
Sbjct: 182 GLLQIKPLLRFENKVIVPFEKIRTRKKAIHRIEELFAEDAEKGVPLKAAIIHANQPDEAH 241
Query: 239 EMKESLQ---PYVKKPISVLETGSIIQTHTGENA 269
++ L P+V+ IS G +I TH GE A
Sbjct: 242 RWRDELSARYPHVEFSISYF--GPVIATHVGEGA 273
>gi|113941826|ref|ZP_01427605.1| degV family protein [Herpetosiphon aurantiacus ATCC 23779]
gi|113896537|gb|EAU15620.1| degV family protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 277
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 90/267 (33%), Positives = 147/267 (55%), Gaps = 6/267 (2%)
Query: 6 IVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTSQP 64
IVTDS+ I +A E DI ++PL+V D ++D ++ +F + S NLP TSQP
Sbjct: 4 IVTDSTADIPAGLAAENDIHVIPLTVNFDAESFADGVEITHDQFYARLVESNNLPTTSQP 63
Query: 65 PVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL-ANADVTVVDSSFIDQAMK 123
VG F ++ + D IISIH++ LSGT+ +A+Q A L + D+ V+D +
Sbjct: 64 SVGAFEQLYRAIGND-EPIISIHIAGKLSGTIRSAQQAAELLPDFDIRVIDVQSTTMSQG 122
Query: 124 FQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLLN 183
+ AA+ AKEG +EI+A + + E+T L L TL L KGGRIG+ L+ +LLN
Sbjct: 123 WAALLAARAAKEGKSADEIVALVHSIVERTRLLAALDTLRYLEKGGRIGKTRALLGTLLN 182
Query: 184 IRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEMKES 243
++ I+ ++D +++P + R K L + + ++ EL + Y+ + A+E +S
Sbjct: 183 VKPIIDVRDGEVKPFEQVRSKKKAVARLIEEARSM--APFEELAVLYSRNEAEAREFAQS 240
Query: 244 L-QPYVKKPISVLETGSIIQTHTGENA 269
L + + I + E G+++ TH G A
Sbjct: 241 LNEIFPADRIVLAEIGAVVGTHIGPGA 267
>gi|57233961|ref|YP_181976.1| degV family protein [Dehalococcoides ethenogenes 195]
gi|57224409|gb|AAW39466.1| degV family protein [Dehalococcoides ethenogenes 195]
Length = 279
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 90/275 (32%), Positives = 142/275 (51%), Gaps = 6/275 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
+KIVTDS+ I ++A EL IT+VPL+V D + D + +F + S P T+
Sbjct: 3 VKIVTDSTSDISQKLAAELGITVVPLTVSFDNEHFKDGLSITPDQFFSRLTSQDVFPTTT 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANA--DVTVVDSSFIDQ 120
QP GVF + F++L E+ +I+ I +S LSGT +A+ A + + V V+DS +
Sbjct: 63 QPSPGVFLETFEKLCEETDEILVITLSSKLSGTYSSAKNAAEMIHGRCQVEVIDSERVIM 122
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
AA+LAK G L+E+ I + + TL L KGGR+G+ L+ S
Sbjct: 123 GTGLLTIYAAELAKTGLGLKELSQTIRQKMADCHPIMYFDTLTYLHKGGRMGKAQSLVGS 182
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
LL+I+ I++M+D + P+ K R + ++L ++ L + YA SPE A E+
Sbjct: 183 LLSIKPILKMEDGIICPLSKVRSRRAGMEYLYKFITAF--PKIKYLAVEYATSPEDADEL 240
Query: 241 KESLQPYVKK-PISVLETGSIIQTHTGENAWAVLI 274
L + K I + G ++ +TG NA AV +
Sbjct: 241 AAKLMEILPKVKIYRSQIGPVVGAYTGANAVAVTV 275
>gi|148322369|gb|EDK87619.1| possible DegV family kinase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 845
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 83/276 (30%), Positives = 156/276 (56%), Gaps = 13/276 (4%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
++KI I+TDS+ I P++ + LD+T++P+ + + Y D +L + EF + + + +P
Sbjct: 561 LSKIAILTDSASDITPDMIEGLDVTVIPIRLKIGENNYKDGVNLSKKEFWHKLLTEKVMP 620
Query: 60 KTSQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGATLAN--ADVTVVDSS 116
KT+QP F D ++ L G +IIS+H+S +SGT + A+ + D+ +VDS
Sbjct: 621 KTAQPSPAEFRDYYEELFNKGYEKIISLHISSKMSGTQQVAKVAREMLKREKDIIIVDSK 680
Query: 117 FIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSG 176
+ +QV EAAK+ K GA LE+I+ ++ E+ +K ++Y +S L L KGGRIGR S
Sbjct: 681 SVTFGQAYQVLEAAKMIKAGAKLEDILTRLYEIADKMKVYFAVSDLTYLEKGGRIGRASS 740
Query: 177 LISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAG---- 232
+I +LL +R +++++D ++ K G + +++ + N + K L ++ G
Sbjct: 741 VIGNLLKLRPVLKLEDGEVSLETKTFGERGAISYMEKIIKN-EGKNSIYLYTAWGGTNQE 799
Query: 233 --SPELAQEMKESLQPYVKKPISVLETGSIIQTHTG 266
S ++ +++ ++++ K E G+ I +H+G
Sbjct: 800 LQSTDILKKVADTMRKIEYK--GRFEIGATIGSHSG 833
>gi|114566579|ref|YP_753733.1| hypothetical protein Swol_1050 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337514|gb|ABI68362.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 283
Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 81/271 (29%), Positives = 141/271 (52%), Gaps = 8/271 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
+K+ TDS+ I E+ +EL I I+PLSV + + +++ F + ++ + +P +SQ
Sbjct: 3 VKVFTDSTSYISKEMQEELHIEIIPLSVHFSDESFIETEVDYEYFYQKIEKTGEIPTSSQ 62
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-----RQGATLANADVTVVDSSFI 118
PP G F F + G ++ I +S +SGT A + A + ++DS
Sbjct: 63 PPPGQFFAAFKKALSRGEHVVGIFISSTMSGTWATALHVKKQLMEQYPEARMEIIDSHTN 122
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
A+ QV EAA++AK G +++ ++ + + ++ Y TLE L KGGRIG S L+
Sbjct: 123 CMALGLQVVEAARVAKAGGNIDAVVKAAQYIHDRVHFYFVPETLEYLRKGGRIGTASALL 182
Query: 179 SSLLNIRVIM--QMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPE 235
+LLNIR I+ M + K RG + K+ L + + Q + E+ + + +PE
Sbjct: 183 GTLLNIRPILTVDMAKGMTHLLEKARGTSNAVKRMLYLMEEDHQKYGLKEIIVHHINAPE 242
Query: 236 LAQEMKESLQPYVKKPISVLETGSIIQTHTG 266
A++++++L P+S+L G +I HTG
Sbjct: 243 KARQLRQTLVDRYALPVSILSIGPVIGLHTG 273
>gi|150390888|ref|YP_001320937.1| degV family protein [Alkaliphilus metalliredigens QYMF]
gi|149950750|gb|ABR49278.1| degV family protein [Alkaliphilus metalliredigens QYMF]
Length = 277
Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 91/272 (33%), Positives = 149/272 (54%), Gaps = 12/272 (4%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
+KIVTDSS I E+ ++ +I +VPL + +D YSD D+ +F M++S LPKTS
Sbjct: 1 MKIVTDSSCDIPRELIEKYNIDVVPLQIEIDDKNYSDGVDITHQQFYEKMKTSLGLPKTS 60
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD---VTVVDSSFID 119
QP F DV+ + QI+SIH+S LSGT +A + + + D+
Sbjct: 61 QPSPQSFVDVYQDNIKKYGQILSIHLSSKLSGTCHSAMMAKEMVGEEEGRIETFDTLSGS 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ QV EA L ++G D++ II ++ E +E+T + + L TLEN VKGGR+ + ++
Sbjct: 121 FGVGAQVLEACHLVEQGLDMDTIIERLNEYREQTRVVVYLETLENAVKGGRVSKPKEFVA 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKW-LDDLSANLQNKQVAELGISYAGSPELAQ 238
+LLN++ I+ +++ + + RG K K+ L+++ + + +GI++ E A
Sbjct: 181 NLLNLKPIVHVEEGYVRVLKNIRGKKKGMKFLLEEIEKKNIDYKDRVIGITHCDCLEDAL 240
Query: 239 EMKESLQPYVKK--PISVLET--GSIIQTHTG 266
+KE + +KK P VL T G +I TH G
Sbjct: 241 ILKEEI---IKKFNPAEVLVTTMGPVIGTHAG 269
>gi|116492711|ref|YP_804446.1| hypothetical protein PEPE_0947 [Pediococcus pentosaceus ATCC 25745]
gi|116102861|gb|ABJ68004.1| hypothetical protein PEPE_0947 [Pediococcus pentosaceus ATCC 25745]
Length = 287
Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 88/278 (31%), Positives = 150/278 (53%), Gaps = 7/278 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
K IVTDS+ + + + +IT+VP+ V++DG +Y + D+ EF +++S++ P T
Sbjct: 2 KTAIVTDSTCYLTDQEIADNNITVVPIPVIIDGKIYKEGVDITTEEFYERLRTSQSFPST 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQ-GATLANADVTVVDSSFID 119
SQPP+G ++++ LA+ G IISIH+S +SG V + + T+ ++ V DS
Sbjct: 62 SQPPLGEMIELYENLAKAGYDTIISIHLSSTISGFVSSLKSLEGTIEGVNLVVYDSQITI 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ M EAA+LA+EG D++ I+ +++ V+ Y + L+NLV+GGR+ S +
Sbjct: 122 RLMGILALEAARLAREGKDVDTILERLDYVRSTFGEYFVVDDLQNLVRGGRLSNASAFVG 181
Query: 180 SLLNIRVIMQMKD-HQLEPIVKGRGAKTFKKWLDDL--SANLQNKQVAELGISYAGSPEL 236
SLL I+ I+ D H++ K R K ++ L A + + + +
Sbjct: 182 SLLKIKPILTFNDAHEIVAFEKVRSRKKAIARVEKLFDEAYRSAEYPLRAFVIHGNDEKS 241
Query: 237 AQEMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVL 273
A + K SL + Y + PI + G +I TH GE A A++
Sbjct: 242 ALKWKASLEEKYPQLPIDISYFGPVIGTHLGEKAIALI 279
>gi|57233960|ref|YP_181977.1| degV family protein [Dehalococcoides ethenogenes 195]
gi|57224408|gb|AAW39465.1| degV family protein [Dehalococcoides ethenogenes 195]
Length = 281
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 84/270 (31%), Positives = 144/270 (53%), Gaps = 7/270 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKTS 62
+KI+TDS+ I PE+A + IT++PL+V + D L+ EF R + S P+T+
Sbjct: 3 VKIITDSTSDIPPEMATNMGITVIPLTVSFGSEHFLDNVTLKPDEFYRRLSQSGIYPQTT 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL---ANADVTVVDSSFID 119
QP VF D +++L + I+ I +S LSGT ++A ++ V V+DS +
Sbjct: 63 QPSPAVFKDNYEKLMPEAEGILVITISSKLSGTYQSALSAVSMLENPTCPVEVIDSQTVS 122
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A+ +A++LA+ G L EI I + + + TL L KGGRIGR ++
Sbjct: 123 LALGLLAVKASELARSGKTLAEIKEAITQSLPDAQPLMFFDTLTYLQKGGRIGRAQSMLG 182
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLL+++ ++ ++D + P+ + R + L + +A Q+ + +GI YA S A +
Sbjct: 183 SLLSVKPLLTVRDGVVTPLTRVRSLQAGMDQLYNFAA--QHSTLEYVGIGYATSTTDALK 240
Query: 240 MKESLQP-YVKKPISVLETGSIIQTHTGEN 268
+KE L P + + I + + G ++ T+TG N
Sbjct: 241 LKERLAPLFPPEKIYITQVGPVVGTYTGPN 270
>gi|152977405|ref|YP_001376922.1| degV family protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152026157|gb|ABS23927.1| degV family protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
Length = 280
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 86/271 (31%), Positives = 139/271 (51%), Gaps = 4/271 (1%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLPKT 61
+ IVTDS+ I + +EL+I ++PL+V+ Y + + + +F ++ LPKT
Sbjct: 2 RTAIVTDSTAYIPKHIREELNIHMIPLNVVFGTTSYQEEEEITADDFYVKVREQEELPKT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQ-GATLANADVTVVDSSFIDQ 120
SQP +G F ++F+ LA++ +ISIH+S +SGT + A G + DV DS +
Sbjct: 62 SQPAIGKFVELFEELAKEYDAVISIHLSSGISGTYQTATTAGQMVEGIDVYAYDSEISCE 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F V E AK+A+EG EEI+ + +E+K+ + Y + L +L +GGR+ I S
Sbjct: 122 VQGFYVREGAKMAREGKTPEEILKRFDEMKKTIDAYFVVDDLHHLQRGGRLNSAQAFIGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
LL ++ I+ +D + P K R K K+ ++ E I +A E A+
Sbjct: 182 LLQVKPILYFRDKVIIPFEKIRTRKKALKRIVEIFDEQASKGLPMEAVIIHANREEEAEA 241
Query: 240 MKESLQ-PYVKKPISVLETGSIIQTHTGENA 269
K+ LQ Y I G++I TH GE +
Sbjct: 242 WKQELQEKYPHVTIRTSYFGAVIGTHLGEGS 272
>gi|23099973|ref|NP_693439.1| hypothetical protein OB2518 [Oceanobacillus iheyensis HTE831]
gi|22778204|dbj|BAC14474.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 279
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 88/273 (32%), Positives = 137/273 (50%), Gaps = 9/273 (3%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
KI +++DS+ I + + +I +VPLSV+ D Y + D+ EF + M+S+++LP T
Sbjct: 2 KIAVMSDSTAYISKDDRERYNIHMVPLSVIFDDASYQEEIDITTEEFYKKMKSTKDLPST 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANA-DVTVVDSSFIDQ 120
SQP +G + LAE +ISIH+S +SGT + + + +V DS
Sbjct: 62 SQPSIGYVTKKLESLAEHFDAVISIHLSSGISGTYQTVTSAGEMVDGIEVITFDSEISCM 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F EAAKLAKEG + EI+ ++ E+K+ Y + L NL +GGR+ LI S
Sbjct: 122 VQGFYAIEAAKLAKEGKSVNEIMDRLHEMKQSIRAYFMVDDLTNLQRGGRLSGAQALIGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKT----FKKWLDDLSANLQNKQVAELGISYAGSPEL 236
LL ++ I+ ++ + P K R K L+D + + + V G A + +L
Sbjct: 182 LLQVKPILHFQNKLIVPFEKIRTRKKAIHRMMGMLEDEAEGNELRVVFIHGNDEASAKQL 241
Query: 237 AQEMKESLQPYVKKPISVLETGSIIQTHTGENA 269
Q+ KE Y S+ G +I TH GE A
Sbjct: 242 EQQFKEK---YPNAETSISYFGPVIGTHLGEGA 271
>gi|16804552|ref|NP_466037.1| hypothetical protein lmo2514 [Listeria monocytogenes EGD-e]
gi|47096107|ref|ZP_00233708.1| DegV family protein [Listeria monocytogenes str. 1/2a F6854]
gi|153175766|ref|ZP_01931070.1| hypothetical protein LMIG_01587 [Listeria monocytogenes FSL N3-165]
gi|153180605|ref|ZP_01933648.1| hypothetical protein LMMG_02023 [Listeria monocytogenes F6900]
gi|153184910|ref|ZP_01935558.1| hypothetical protein LMOG_01476 [Listeria monocytogenes J0161]
gi|153192171|ref|ZP_01939216.1| hypothetical protein LMPG_01300 [Listeria monocytogenes J2818]
gi|153197180|ref|ZP_01941450.1| hypothetical protein LMRG_01734 [Listeria monocytogenes 10403S]
gi|30179845|sp|Q8Y4D5|Y2514_LISMO UPF0230 protein lmo2514
gi|16412002|emb|CAD00592.1| lmo2514 [Listeria monocytogenes]
gi|47015568|gb|EAL06500.1| DegV family protein [Listeria monocytogenes str. 1/2a F6854]
gi|126942422|gb|EBA20161.1| hypothetical protein LMOG_01476 [Listeria monocytogenes J0161]
gi|127633231|gb|EBA22648.1| hypothetical protein LMRG_01734 [Listeria monocytogenes 10403S]
gi|127764499|gb|EBA25031.1| hypothetical protein LMPG_01300 [Listeria monocytogenes J2818]
gi|133729191|gb|EBA30889.1| hypothetical protein LMIG_01587 [Listeria monocytogenes FSL N3-165]
gi|133731998|gb|EBA33696.1| hypothetical protein LMMG_02023 [Listeria monocytogenes F6900]
Length = 283
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 91/273 (33%), Positives = 140/273 (51%), Gaps = 7/273 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLPKT 61
KI +VTDS+ + EV ++L I +VPLSV++DG Y + + L +F R ++ + N P +
Sbjct: 4 KIAVVTDSTTYLPDEVKEQLRINVVPLSVIIDGKSYREGEELSATDFYRKVKEAENFPTS 63
Query: 62 SQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVE-AARQGATLANADVTVVDSSFID 119
SQP G F +F+ L E G +ISIH+S +SGT + AA G + +V DS
Sbjct: 64 SQPAPGEFIHLFENLKEQGFDTVISIHLSSGISGTFQNAASAGELIEGLNVVAYDSELSC 123
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A +AA++A L++II K++++K+ + Y + L NL +GGR+ L+
Sbjct: 124 MAQGMFAVKAAEMALANEPLDQIIQKLDKIKQAQDAYFMVDDLNNLQRGGRLNGAQALVG 183
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLL I+ I+ D Q+ K R K K ++D+ + AE G+ +LA+
Sbjct: 184 SLLQIKPILHFNDKQIVLFEKVRTQKKALKRIEDILQKAVQNKTAEKAYVIHGN-DLAKG 242
Query: 240 MKESLQPYVKKPISVLET---GSIIQTHTGENA 269
Q K P E G +I TH GE A
Sbjct: 243 EAWLAQLEAKFPEVTFELSYFGPVIGTHLGEGA 275
>gi|73748949|ref|YP_308188.1| degV family protein [Dehalococcoides sp. CBDB1]
gi|73660665|emb|CAI83272.1| degV family protein [Dehalococcoides sp. CBDB1]
Length = 280
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 86/276 (31%), Positives = 145/276 (52%), Gaps = 7/276 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKTS 62
+KI+TDS+ I PE+AK + IT++PL+V + D L+ EF R + S P T+
Sbjct: 3 VKIITDSTSDIPPEMAKNMGITVIPLTVSFGNEHFLDNVTLKPDEFYRRLSLSGIYPHTT 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL---ANADVTVVDSSFID 119
QP VF + +++L I+ I++S LSGT ++A T+ + + ++DS +
Sbjct: 63 QPSPAVFKENYEKLMPQADGILVINISSKLSGTYQSALSAVTMLENISCPIEIIDSQTVS 122
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A+ +A LAK G L EI I + + + TL L KGGRIGR +I
Sbjct: 123 LALGLLAIKANDLAKSGKTLGEIKEAITQSLPDAQPVMFFDTLTYLHKGGRIGRAQSMIG 182
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLL+++ ++ ++D + P+ + R + L + +A Q+ + +GI YA S A +
Sbjct: 183 SLLSVKPLLTVRDGVVTPLTRVRSLQAGMDQLYNFAA--QHSTLEYVGIGYATSTTDALK 240
Query: 240 MKESLQP-YVKKPISVLETGSIIQTHTGENAWAVLI 274
+KE L P + + I + + G ++ T+TG N + I
Sbjct: 241 LKERLAPLFPPEKIYLTQVGPVVGTYTGPNTLCINI 276
>gi|149179657|ref|ZP_01858162.1| DegV family protein [Bacillus sp. SG-1]
gi|148851849|gb|EDL65994.1| DegV family protein [Bacillus sp. SG-1]
Length = 282
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 3/273 (1%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
KI VTDS+ E+ D+ +VP+++++ Y D DL E + ++ + KT
Sbjct: 5 KIAWVTDSTACRVDELENNEDVYVVPMNILIGNQEYQDGVDLFPQELFKFLKENGADAKT 64
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQA 121
SQP +GVF +++ +L ++ I S+H+S A SGT+ +A+Q A L + VTV+DS +
Sbjct: 65 SQPSIGVFQELYTKLQDNYDHIFSLHVSAAFSGTISSAQQAAQLVDIPVTVIDSKILSYP 124
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
+ + + + AKEGA EI ++ E ++ + +LE L K GR+ VS + S+
Sbjct: 125 LTKLILDGIEAAKEGAKPSEIEKQVLTKINTGETFVMVGSLEQLHKSGRMNGVSFFLGSM 184
Query: 182 LNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
L I+ I+ +KD +LE + K R AK + D L LQ K + E+ I Y + A
Sbjct: 185 LKIKPILAIKDGKLEVVEKVRSIAKGHIRMKDYLDHALQTKDIIEVYILYGLNKAEADSW 244
Query: 241 KESLQ-PYVKKPISVLETGSIIQTHTGENAWAV 272
L Y + S E G++I H GE+ +
Sbjct: 245 VSDLSGKYPEINFSSHELGAVIGVHAGEDTLGI 277
>gi|156740620|ref|YP_001430749.1| degV family protein [Roseiflexus castenholzii DSM 13941]
gi|156231948|gb|ABU56731.1| degV family protein [Roseiflexus castenholzii DSM 13941]
Length = 281
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 86/278 (30%), Positives = 149/278 (53%), Gaps = 9/278 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDG-VVYSDADLEEGEFLRLMQSSRNLP 59
M +KIV DS+ I +V I +VP+ + G + D D+ E+ R + +LP
Sbjct: 1 MPSVKIVVDSTADIPADVRAAYHIHVVPVLLHRRGATLRDDIDISRDEYYRWIAEHDDLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL-ANADVTVVDSSFI 118
TS P VG+F +VF L DG+ ++S+ ++ LS T AA Q A L A+A + VDS I
Sbjct: 61 TTSAPSVGMFEEVFRELTRDGSAVLSLSVAAGLSATYGAAVQAARLVADARIVCVDSHSI 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ + AA+ +GA L+E +A +E ++++T Y+ L TL L +GGRI R L+
Sbjct: 121 AMPIAYLALAAARRLSQGATLDEAVALVERLRDRTVAYVALQTLRYLERGGRISRTRALL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQV-AELGISYAGSPELA 237
+LL+++ I++++D Q+ P+ + R + L +L+ Q++ V EL + Y A
Sbjct: 181 GTLLDVKPILEVRDSQVLPVERVRTWRRVPARLLELA---QSRGVYQELSVVYTTDRADA 237
Query: 238 QEMKESLQP---YVKKPISVLETGSIIQTHTGENAWAV 272
+ + ++ V+ I ++ G+++ TH G A +
Sbjct: 238 ESLADACANAGLLVRDRIRTVQIGAVLGTHMGPGALGI 275
>gi|116873878|ref|YP_850659.1| DegV family protein [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116742756|emb|CAK21880.1| degV [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 283
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 145/274 (52%), Gaps = 9/274 (3%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLPKT 61
KI +VTDS+ + +V ++L I ++PLSV++DG Y +A+ L+ +F +++ ++N P +
Sbjct: 4 KIAVVTDSTAYLPDKVREQLQIHVIPLSVIIDGKAYREAEELDAADFYEMVKVAQNFPTS 63
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVE-AARQGATLANADVTVVDSSFID 119
SQP G F +F+ L G + +I+IH+S +SGT + AA G + +V DS
Sbjct: 64 SQPAPGEFIQLFESLKSKGYETVITIHLSSGISGTFQNAASAGELIDGLNVIAYDSELSC 123
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A T+AA++A ++ II + ++K+ + Y + L NL +GGR+ L+
Sbjct: 124 MAQGMLATKAAEMALNDEPIDSIIGALNKIKQAQDAYFMVDDLNNLQRGGRLNGAQALVG 183
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDD-LSANLQNKQVAELGISYAGSPELAQ 238
SLL I+ I+ + ++ K R K K ++D L ++NK + + + PE +
Sbjct: 184 SLLQIKPILHFDNKEIVLFEKVRTQKKALKRIEDILQTAIENKTAEKAYVIHGNDPEKGE 243
Query: 239 EMKESLQPYVKKPISVLET---GSIIQTHTGENA 269
++ L K P + E G +I TH GE A
Sbjct: 244 SWRKHLA--TKFPEVIFELSYFGPVIGTHLGEGA 275
>gi|89210425|ref|ZP_01188815.1| DegV [Halothermothrix orenii H 168]
gi|89160074|gb|EAR79732.1| DegV [Halothermothrix orenii H 168]
Length = 290
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 83/279 (29%), Positives = 143/279 (51%), Gaps = 4/279 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLP 59
M K+KI TDS + P+V DI ++ V Y D D L GEF +++ +P
Sbjct: 1 MEKVKIFTDSCSDLSPDVISRYDIKMLSTPVYFGEERYYDRDNLTPGEFYNKLENYSGVP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVE-AARQGATLANADVTVVDSSFI 118
KTSQ VF F + E+G +++S++ S LSG E AA + + D+ V+D+
Sbjct: 61 KTSQIGPTVFESEFKKALEEGYKVLSLNFSSKLSGIFESAALAKKNIGSDDIHVIDTRCA 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
V AA+L +EG DL E+I + E + +LE L +GGRI + I
Sbjct: 121 SVGFGLSVIYAARLLEEGRDLNEVIESTLDYCAHQEHIFAVGSLEMLKRGGRIKSTTAFI 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
++L I+ I+ +D ++ P+ K RG K F+ L+ + ++ +G++++ +P LA
Sbjct: 181 GNILKIKPILHFRDGEILPLGKARGKKRMFEYLLEKMEERGKDLGSQFIGLNHSANPGLA 240
Query: 238 QEMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVLIR 275
++K+ + + Y + + E G+ I +H G+N +V +
Sbjct: 241 NKLKDMIKEKYGVEEFYISEIGAAIGSHVGKNTVSVFFQ 279
>gi|147669716|ref|YP_001214534.1| degV family protein [Dehalococcoides sp. BAV1]
gi|146270664|gb|ABQ17656.1| degV family protein [Dehalococcoides sp. BAV1]
Length = 280
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 85/276 (30%), Positives = 145/276 (52%), Gaps = 7/276 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKTS 62
+KI+TDS+ I PE+AK + IT++PL+V + + D L+ EF R + S P T+
Sbjct: 3 VKIITDSTSDIPPEMAKNMGITVIPLTVSFENEHFLDNVTLKPDEFYRRLSLSGIYPHTT 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL---ANADVTVVDSSFID 119
QP VF + +++L I+ I +S LSGT ++A T+ + + ++DS +
Sbjct: 63 QPSPAVFKENYEKLMPQADGILVITISSKLSGTYQSALSAVTMLENISCPIEIIDSQTVS 122
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A+ +A LAK G L EI I + + + TL L KGGRIGR ++
Sbjct: 123 LALGLLAIKANDLAKSGKTLGEIKEAITQSLPDAQPVMFFDTLTYLHKGGRIGRAQSMLG 182
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLL+++ ++ ++D + P+ + R + L + +A Q+ + +GI YA S A +
Sbjct: 183 SLLSVKPLLTVRDGVVTPLTRVRSLQAGMDQLYNFAA--QHSTLEYVGIGYATSTTDALK 240
Query: 240 MKESLQP-YVKKPISVLETGSIIQTHTGENAWAVLI 274
+KE L P + + I + + G ++ T+TG N + I
Sbjct: 241 LKERLAPLFPPEKIYLTQVGPVVGTYTGPNTLCINI 276
>gi|92089922|ref|ZP_01274842.1| DegV [Lactobacillus reuteri 100-23]
gi|91803297|gb|EAS88176.1| DegV [Lactobacillus reuteri 100-23]
Length = 292
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 91/283 (32%), Positives = 148/283 (52%), Gaps = 17/283 (6%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
KI +VTDS+ + PE A +I +VP+ V +DG Y + D+ +F M +S + P T
Sbjct: 2 KIAVVTDSTAYLSPEEAAANNIHVVPIPVTLDGQTYREGVDISTSDFYEKMANSSSFPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANADVTVV--DSSFI 118
SQ P+G +V+ LA++G +ISIH++ A++G ++ Q A + +V DS
Sbjct: 62 SQTPIGQLMEVYQGLADEGYDAVISIHLTRAITGYLDTVEQLAEQMKDTIKIVPIDSHLT 121
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ M + EAAKLA EG DL++I+ K++E ++ + L+NLV+GGR+ S +
Sbjct: 122 VKMMGYLALEAAKLASEGDDLDDIVKKVKEYRDTFNNVFVVDDLQNLVRGGRLSNASAFV 181
Query: 179 SSLLNIRVIMQMK--DHQLEPIVKGRGAKTFK----KWLDDLSANLQNKQVAELGISYAG 232
S+L I+ ++ M H +E K R K K + D+ A L A + +A
Sbjct: 182 GSILKIKPLLTMHTPTHAIEAFEKVRSMKKAKLRCEQIFDEDIAKLDYPVKAM--VIHAN 239
Query: 233 SPELAQEMKESLQ---PYVKKPISVLETGSIIQTHTGENAWAV 272
PE Q+ + LQ P + +S G +I +H G+ A A+
Sbjct: 240 VPEEGQKWLDKLQADHPDISFELSYF--GPVIGSHLGQGALAL 280
>gi|148544162|ref|YP_001271532.1| degV family protein [Lactobacillus reuteri F275]
gi|148531196|gb|ABQ83195.1| degV family protein [Lactobacillus reuteri F275]
Length = 292
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 91/283 (32%), Positives = 148/283 (52%), Gaps = 17/283 (6%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
KI +VTDS+ + PE A +I +VP+ V +DG Y + D+ +F M +S + P T
Sbjct: 2 KIAVVTDSTAYLSPEEAAANNIHVVPIPVTLDGQTYREGVDISTSDFYEKMANSSSFPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANADVTVV--DSSFI 118
SQ P+G +V+ LA+DG +ISIH++ A++G ++ Q A + +V DS
Sbjct: 62 SQTPIGQLMEVYQGLADDGYDAVISIHLTRAITGYLDTVEQLAEQMKDTIKIVPIDSHLT 121
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ M + EAAKLA EG DL++I+ K++E ++ + L+NLV+GGR+ S +
Sbjct: 122 VKMMGYLALEAAKLASEGDDLDDIVKKVKEYRDTFNNVFVVDDLQNLVRGGRLSNASAFV 181
Query: 179 SSLLNIRVIMQMK--DHQLEPIVKGRGAKTFK----KWLDDLSANLQNKQVAELGISYAG 232
S+L I+ ++ M + +E K R K K + D+ A L A + +A
Sbjct: 182 GSILKIKPLLTMHTPTYAIEAFEKVRSMKKAKLRCEQIFDEDIAKLDYPVKAM--VIHAN 239
Query: 233 SPELAQEMKESLQ---PYVKKPISVLETGSIIQTHTGENAWAV 272
PE Q+ + LQ P + +S G +I +H G+ A A+
Sbjct: 240 VPEEGQKWLDKLQADHPDISFELSYF--GPVIGSHLGQGALAL 280
>gi|73748948|ref|YP_308187.1| degV family protein [Dehalococcoides sp. CBDB1]
gi|73660664|emb|CAI83271.1| degV family protein [Dehalococcoides sp. CBDB1]
Length = 279
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 87/275 (31%), Positives = 146/275 (53%), Gaps = 6/275 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
+KIVTDS+ I ++A EL IT+VPL+V + D + +F + S P T+
Sbjct: 3 VKIVTDSTSDISQKLAAELGITVVPLTVSFGNEHFKDGVSITPEQFFTRLTSQNIYPTTT 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANA--DVTVVDSSFIDQ 120
QP G+F + F++L E+ +I+ I +S LSGT+ +A+ A + + V V+DS +
Sbjct: 63 QPSPGLFLETFEKLCEETDEILVITVSSKLSGTLSSAKNAAAIIHGRCQVEVIDSQRVIM 122
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
AA+LAK G +L+E+ I + + + TL L KGGR+G+ L+ +
Sbjct: 123 GTGLLAIYAAELAKTGLNLKELSQAISQKLDDCHPIMYFDTLTYLHKGGRMGKAQSLVGT 182
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
+L+I+ I++M+D + P+ K R + +L + ++ L + +A SPE A E+
Sbjct: 183 MLSIKPILKMEDGIICPLSKVRSPRAGMDYLYKFINSY--PKIKYLAVEHATSPEDADEL 240
Query: 241 KESLQPYV-KKPISVLETGSIIQTHTGENAWAVLI 274
E L + K+ I G ++ T+TG NA AV +
Sbjct: 241 VERLGNILPKEQIFRSRIGPVVGTYTGANAVAVTV 275
>gi|56964849|ref|YP_176580.1| hypothetical protein ABC3085 [Bacillus clausii KSM-K16]
gi|56911092|dbj|BAD65619.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 280
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 86/277 (31%), Positives = 141/277 (50%), Gaps = 5/277 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLP 59
M K ++TDS+ ++ + +EL I +PLSV+ G Y + DL F + + LP
Sbjct: 1 MGKTAVLTDSTAYLDKQTLEELGIYTIPLSVIFSGKNYREEIDLSTAAFYEKLSTEEALP 60
Query: 60 KTSQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAA-RQGATLANADVTVVDSSF 117
TSQP +G+F ++ L E+G ++S+H+S +SGT++ A G + + VDS
Sbjct: 61 TTSQPAIGMFTELLQELKEEGYTDVVSVHLSTKISGTLQTALSAGEMVEGITLHGVDSEI 120
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
F AAKLA EG E I+A++E++K + Y + L +L +GGR+ L
Sbjct: 121 SCAPQGFLARTAAKLALEGTPPENIVAELEKIKAQIRAYFVVHDLHHLRRGGRLNSAQAL 180
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPEL 236
I S+L I+ I+ M++ + P K R K LD L +L V E+ + +A +
Sbjct: 181 IGSMLQIKPILHMEEGLIVPYAKVRTEKKAINHILDMLFDDLAAGNVNEVSVIHANNRAK 240
Query: 237 AQEMKESL-QPYVKKPISVLETGSIIQTHTGENAWAV 272
A ++KE + + + I + G +I TH G + V
Sbjct: 241 AMQLKEKIAEQHPSTTIQISYFGPVIGTHLGSGSLGV 277
>gi|147669715|ref|YP_001214533.1| degV family protein [Dehalococcoides sp. BAV1]
gi|146270663|gb|ABQ17655.1| degV family protein [Dehalococcoides sp. BAV1]
Length = 279
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 87/275 (31%), Positives = 146/275 (53%), Gaps = 6/275 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
+KIVTDS+ I ++A EL IT+VPL+V + D + +F + S P T+
Sbjct: 3 VKIVTDSTSDISQKLAAELGITVVPLTVSFGNEHFKDGVSITPEQFFTRLTSQNIYPTTT 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANA--DVTVVDSSFIDQ 120
QP G+F + F++L E+ +I+ I +S LSGT+ +A+ A + + V V+DS +
Sbjct: 63 QPSPGLFLETFEKLCEETDEILVITVSSKLSGTLSSAKNAAAIIHGRCQVEVIDSQRVIM 122
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
AA+LAK G +L+E+ I + + + TL L KGGR+G+ L+ +
Sbjct: 123 GTGLLAIYAAELAKTGLNLKELSQAISQKLDDCHPIMYFDTLTYLHKGGRMGKAQSLVGT 182
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
+L+I+ I++M+D + P+ K R + +L + ++ L + +A SPE A E+
Sbjct: 183 MLSIKPILKMEDGIICPLSKVRSRRAGMDYLYKFINSY--PKIKYLAVEHATSPEDADEL 240
Query: 241 KESLQPYV-KKPISVLETGSIIQTHTGENAWAVLI 274
E L + K+ I G ++ T+TG NA AV +
Sbjct: 241 VERLGNILPKEQIFRSRIGPVVGTYTGANAVAVTV 275
>gi|19705232|ref|NP_602727.1| DEGV protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19713185|gb|AAL94026.1| DEGV protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 845
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 82/279 (29%), Positives = 155/279 (55%), Gaps = 19/279 (6%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
++KI I+TDS+ + P++ + LD+T++P+ + + Y D +L + EF + + + +P
Sbjct: 561 LSKIAILTDSASDLTPDMIEGLDVTVIPIRLKIGENNYKDGVNLSKKEFWHKLMTEKVVP 620
Query: 60 KTSQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGATLAN--ADVTVVDSS 116
KT+QP F D ++ L G +IISIH+S +SGT + A+ + D+ +VDS
Sbjct: 621 KTAQPSPAEFRDYYEELFNKGYEKIISIHISSKMSGTQQVAKVAREMLKREKDIIIVDSK 680
Query: 117 FIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSG 176
+ +QV EAAK+ K G L++I+ ++ E+ +K ++Y +S L L KGGRIGR S
Sbjct: 681 SVTFGQAYQVLEAAKMIKSGVKLDDILTRLYEIADKMKVYFAVSDLTYLEKGGRIGRASS 740
Query: 177 LISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPEL 236
+I +LL +R +++++D ++ K G + +++ + N + K L ++ G+
Sbjct: 741 VIGNLLKLRPVLKLEDGEVCLETKTFGERGAISYMEKIIKN-EGKNSIYLYTAWGGT--- 796
Query: 237 AQEMKESLQPYVKKPISVL---------ETGSIIQTHTG 266
QE++ + +K+ ++ E G+ I +H+G
Sbjct: 797 NQELQNT--DVLKRTADIMRKIEYKGRFEIGATIGSHSG 833
>gi|148657622|ref|YP_001277827.1| degV family protein [Roseiflexus sp. RS-1]
gi|148569732|gb|ABQ91877.1| degV family protein [Roseiflexus sp. RS-1]
Length = 281
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 85/277 (30%), Positives = 140/277 (50%), Gaps = 7/277 (2%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDG-VVYSDADLEEGEFLRLMQSSRNLP 59
M + IV DS+ I + I +VP+ + G + D D+ E+ R + LP
Sbjct: 1 MPSVHIVVDSTADIPADARAAYHIHVVPVLLHRQGETLRDDIDISRDEYYRWIAEHNELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLA-NADVTVVDSSFI 118
TS P VG+F +VF L DG ++SI ++ LS T AA Q A L +A + VDS I
Sbjct: 61 TTSAPSVGMFEEVFRELTRDGGAVLSISVAAGLSATYNAAVQAARLVEDARIVCVDSHSI 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ + AA+ +GA LEE +A +E ++E+T Y+ L TL L +GGRI R L+
Sbjct: 121 AMPVAYLALAAARRLAQGATLEEAVALVETLREQTVAYVALQTLRYLERGGRISRTRALL 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
+LL+++ I++++D Q+ P+ + R + L +L Q EL + Y S A+
Sbjct: 181 GTLLDVKPILEVRDSQVLPVERVRTWRRVPARLLELVQARGAYQ--ELSVVYTTSRAEAE 238
Query: 239 EMKESLQP---YVKKPISVLETGSIIQTHTGENAWAV 272
+ ++ + I ++ G+++ TH G A +
Sbjct: 239 SLADACAAAGLLARDRIRTVQIGAVLGTHMGPGALGI 275
>gi|69244169|ref|ZP_00602705.1| DegV [Enterococcus faecium DO]
gi|68196626|gb|EAN11052.1| DegV [Enterococcus faecium DO]
Length = 282
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 86/278 (30%), Positives = 144/278 (51%), Gaps = 6/278 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
K+ +VTDSS + + D+ ++P+ +++DG +Y++ D+E E+ L+++S++ P T
Sbjct: 2 KLAVVTDSSAYLPERIKNHPDLFVIPIPLIMDGKIYNEGIDIEADEYYGLLKNSKDFPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAA-RQGATLANADVTVVDSSFID 119
SQP VG +++ L E G I+SIH+S +SG V ++ V DS
Sbjct: 62 SQPVVGEVLGLYEELKEKGYDTILSIHLSSGISGFVNTLFAMKDDISGVTVIPYDSKITS 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
M V A L EG L+EI+A I+ +++ T Y+ + L NLV+GGR+ + LI
Sbjct: 122 MPMGHMVEAALDLNDEGQSLDEILAHIDRIRDNTYAYLIVDDLNNLVRGGRLTNGAALIG 181
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN--KQVAELGISYAGSPELA 237
SLL I+ I+ + ++ K R +K +++ N + +L + +A + E+A
Sbjct: 182 SLLKIKPILTFSEGKIVLFEKIRSSKKAFARAEEIIGRRNNEIQPPVKLYVIHANNLEVA 241
Query: 238 QEMKESLQ-PYVKKPISVLETGSIIQTHTGENAWAVLI 274
KE LQ Y I + G +I TH GE A + I
Sbjct: 242 IAEKEKLQKKYPNAEIEIGHFGPVIGTHLGEKAIGIAI 279
>gi|34762119|ref|ZP_00143127.1| Predicted kinase related to hydroxyacetone kinase; DegV family
protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27888196|gb|EAA25254.1| Predicted kinase related to hydroxyacetone kinase; DegV family
protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 845
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 129/221 (58%), Gaps = 4/221 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
++KI I+T S+ I P++ + LD+T++P+ + + Y D +L + EF + + + +P
Sbjct: 561 LSKIAILTYSASDITPDMIEGLDVTVIPIRLKIGENNYKDGVNLSKKEFWHKLLTEKVVP 620
Query: 60 KTSQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGATLAN--ADVTVVDSS 116
KT+QP F D ++ L G +IISIH+S +SGT + A+ + D+ +VDS
Sbjct: 621 KTAQPSPAEFRDYYEELFNKGYEKIISIHISSKMSGTQQVAKVAREMLKREKDIIIVDSK 680
Query: 117 FIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSG 176
+ +QV EAAK+ K G LE+I+ ++ E+ +K ++Y +S L L KGGRIGR S
Sbjct: 681 SVTFGQAYQVLEAAKMIKAGVKLEDILTRLYEIADKMKVYFAVSDLTYLEKGGRIGRASS 740
Query: 177 LISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSAN 217
+I +LL +R +++++D ++ K G + +++ + N
Sbjct: 741 VIGNLLKLRPVLKLEDGEVSLETKTFGERGAISYMEKIIKN 781
>gi|117927980|ref|YP_872531.1| degV family protein [Acidothermus cellulolyticus 11B]
gi|117648443|gb|ABK52545.1| degV family protein [Acidothermus cellulolyticus 11B]
Length = 283
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 87/277 (31%), Positives = 145/277 (52%), Gaps = 8/277 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDAD-LEEGEFLRLMQSSRNLPKTS 62
+ +VTDS+ P A I ++PL+V+ DGV + + + + + + L++ L TS
Sbjct: 3 VAVVTDSTAYF-PSDAVVDGIAVIPLTVLADGVAFREPEEMPPSKAVELLRRGVRL-TTS 60
Query: 63 QPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQA 121
+P VFA +++L GA I+S+H+S LSGTVEAA A D+ VVDS +
Sbjct: 61 RPSPAVFARTYEKLLSGGADGIVSVHLSGRLSGTVEAAHIAARHIGGDIRVVDSESVGMG 120
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
M F V A+ GADL+ + +E V T LY + TLE L +GGR+G V L+ +
Sbjct: 121 MGFAVLAGQAAARSGADLDRVHQVVERVLRATRLYCYVDTLEFLRRGGRLGTVPALVGTA 180
Query: 182 LNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEMK 241
L ++ I+ ++D +L PI + R A L D++A + + + + + A +
Sbjct: 181 LAVKPILAVEDGRLVPIERVRTAARGLTRLADIAAEYTDGFPVSVTVHHLDAAFRADRLA 240
Query: 242 ESLQ---PYVKKPISVLETGSIIQTHTGENAWAVLIR 275
L P++++ + V E G+++ HTG AV ++
Sbjct: 241 ADLDARLPHLRE-LYVAEIGAVVGAHTGPGTVAVAVQ 276
>gi|118443350|ref|YP_877483.1| degV family protein , putative [Clostridium novyi NT]
gi|118133806|gb|ABK60850.1| degV family protein , putative [Clostridium novyi NT]
Length = 277
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 90/280 (32%), Positives = 145/280 (51%), Gaps = 17/280 (6%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E ++ DI ++PL V Y D D++ EFLR M P
Sbjct: 1 MEKIKIITDSTCDLNKETIEKYDIEVIPLIVNFGEESYLDGVDIDTREFLRKMDEECIFP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFI 118
TS F + + + + G +I+SIH+S +SGT ++A L D+ V+DS +
Sbjct: 61 TTSGINPHKFCEYYKKYLDQGYKIVSIHLSSKMSGTYQSACMAKEILETNDIVVIDSLNV 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ V +AA+LA + +E+I ++E + + ++L+NLVKGGR+ + G I
Sbjct: 121 TSGLGLLVIKAAELAGQNYTIEQIEEVVKEKRPHVKNAYAFASLDNLVKGGRLPKAIGAI 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGA-KTFKKWLDDLSANLQNK-----QVAELGISYAG 232
+LLNI++I+ + D ++ I K RG K K L L +N+ Q+ I YA
Sbjct: 181 GNLLNIKLILAVVDGEMAVIDKVRGTKKAIKTILSHLEKMDKNEPSILLQIDNTDIRYA- 239
Query: 233 SPELAQEMKESLQPYVKKPISVLETGSIIQTHTGENAWAV 272
L +E+KE ++ V + G ++ TH+G NA V
Sbjct: 240 ---LEEELKEKNVDFI-----VCDVGCVVGTHSGPNACGV 271
>gi|28210124|ref|NP_781068.1| degV protein [Clostridium tetani E88]
gi|28202560|gb|AAO35005.1| degV protein [Clostridium tetani E88]
Length = 280
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 80/278 (28%), Positives = 147/278 (52%), Gaps = 8/278 (2%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E+ + DI ++PL V Y D D+ E LR M+SS P
Sbjct: 1 MNKIKIITDSTADLSKEIIDKYDIEVIPLLVTFGEESYKDGIDINTSELLRKMESSEEFP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL--ANADVTVVDSSF 117
T+Q F + + + ++G +IIS+H+S +SGT ++A + AN + ++DS
Sbjct: 61 GTAQITPQRFIECYKKYLQEGYKIISLHLSSKMSGTYQSACLAKEILEANETIEIIDSQN 120
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
+ + V +AA+L E +LEEI+ ++ + + L NLVKGGR+ + +G+
Sbjct: 121 VTSGLGLLVIKAARLRDEEYNLEEIVKEVRRTIPHIKSGLVFEELTNLVKGGRLSKTAGV 180
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
+ ++L IR I+ +++ ++ I K RG K +++ D + K+ + + + ++
Sbjct: 181 VGNILGIRPILTVENGEMAVIDKVRGNKKAIRYVLDYIGQVGIKKDEPCILLHIENEDIR 240
Query: 238 QEMKESLQPYVKKPISVL--ETGSIIQTHTGENAWAVL 273
++E LQ +K I + E G ++ H+G+ A +
Sbjct: 241 IPLEEHLQ---EKSIEFMECEVGCVVGVHSGKRACGIF 275
>gi|126700228|ref|YP_001089125.1| hypothetical protein CD2614 [Clostridium difficile 630]
gi|145953065|ref|ZP_01802073.1| hypothetical protein CdifQ_04003043 [Clostridium difficile
QCD-32g58]
gi|115251665|emb|CAJ69500.1| conserved hypothetical protein [Clostridium difficile 630]
Length = 280
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 151/277 (54%), Gaps = 11/277 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLP 59
M KIK++ DS+ + ++ ++ +I +V L+V Y S +++ F R M S+ LP
Sbjct: 1 MDKIKLIVDSACDLPDDIIEKYNIEVVGLNVSFGEESYISGKEIDNETFYRKMSESKVLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL-----ANADVTVVD 114
KTS P F + + E ++ I++S LSGT +A + N V V+D
Sbjct: 61 KTSCPSPDKFLEAYHCQEE---SVLVINISSGLSGTYNSALLAKDMFEKEGNNKKVEVID 117
Query: 115 SSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRV 174
S + V +AA L KEG ++EEI++ I + K+ + L TLEN +KGGRI +
Sbjct: 118 SLSGSIGIGQLVLKAAILIKEGKEIEEIVSIINKYKDNPPFFGTLETLENAIKGGRINPI 177
Query: 175 SGLISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGS 233
+G I + LN + I+Q+ D + PI K RG + KK + + + +++K+ L I +A
Sbjct: 178 AGKIINTLNFKAIIQVADGVVTPIDKARGEGNSLKKLITLVESKIKDKEEKVLFIGHANC 237
Query: 234 PELAQEMKESLQPYVK-KPISVLETGSIIQTHTGENA 269
PE AQ+++E ++ VK K + + E GS++ T+T + A
Sbjct: 238 PEKAQKVREVMEKDVKYKDVVICEIGSVMGTYTSKGA 274
>gi|138896711|ref|YP_001127164.1| DegV family protein [Geobacillus thermodenitrificans NG80-2]
gi|134268224|gb|ABO68419.1| DegV family protein [Geobacillus thermodenitrificans NG80-2]
Length = 281
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 92/274 (33%), Positives = 142/274 (51%), Gaps = 9/274 (3%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLPKT 61
K IVTDS+ + EV + L I ++PLSV+ Y + D+ EF ++ LP T
Sbjct: 2 KTAIVTDSTAYLPKEVRERLGIRLIPLSVIFGEETYREEIDMTTDEFFAKVKQHPTLPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANA-DVTVVDSSFID 119
SQP VG F D+F L E+G +ISIH+S +SGT + A T+ + V DS
Sbjct: 62 SQPAVGEFVDLFTALREEGYDAVISIHLSSGISGTYQGAVTAGTMVDGLRVLAYDSEISC 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A F EAA++A+ G EEIIA+++E+K+ Y + L +L +GGR+ I
Sbjct: 122 MAQGFYAMEAAEMAQAGRTPEEIIARLDEIKQTLRAYFMVDDLAHLQRGGRLTGAQAFIG 181
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVA-ELGISYAGSPELAQ 238
LL I+ +++ ++ + P K R K K +++L A K + + + +A P+ A
Sbjct: 182 GLLQIKPLLRFENKVIVPFEKIRTRKKAVKRIEELFAEDAEKGIPLKAAVIHANQPDEAG 241
Query: 239 EMKESLQ---PYVKKPISVLETGSIIQTHTGENA 269
++ L P+V+ IS G +I TH GE A
Sbjct: 242 RWRDELSARYPHVEFFISYF--GPVIATHVGEGA 273
>gi|47565603|ref|ZP_00236643.1| DegV family protein [Bacillus cereus G9241]
gi|47557239|gb|EAL15567.1| DegV family protein [Bacillus cereus G9241]
Length = 192
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 77/187 (41%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 88 MSHALSGTVEAARQGATLANADVTVVDSSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIE 147
M+ +SGTV A A++ + VTVVDS FI A+ +QV EAAK+A EG LEEI+ +++
Sbjct: 1 MTSGMSGTVATANSAASMTDTKVTVVDSQFITHALAYQVVEAAKMANEGRSLEEILKRVD 60
Query: 148 EVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLLNIRVIMQMKDHQLEPIVK----GRG 203
EV++ T LY+ + TLENLVKGGRIG+ I SLLNI+ I ++D P+ K G+
Sbjct: 61 EVRKNTRLYVVVDTLENLVKGGRIGKGKAFIGSLLNIKPIASLEDGVYNPVTKVRSQGQI 120
Query: 204 AKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEMKESLQPYVKKPIS-VLETGSIIQ 262
KT K ++ +A K V + I +A + LA+ +K +++ S + T II
Sbjct: 121 VKTLAKLFEEDTA---GKVVKAVAIPHAKAIPLAENVKAAVEKVSGFAQSEIFFTTPIIS 177
Query: 263 THTGENA 269
THTG A
Sbjct: 178 THTGPGA 184
>gi|124521419|ref|ZP_01696353.1| degV family protein [Bacillus coagulans 36D1]
gi|124496805|gb|EAY44384.1| degV family protein [Bacillus coagulans 36D1]
Length = 280
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 8/276 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLPKT 61
+ IVTDS+ I EV ++ I ++PL+V+ Y + D+ F M+ + LP +
Sbjct: 2 RTAIVTDSTAYIPKEVREKYSIYMIPLNVIFGQEEYREEVDITADVFFEKMRMADELPTS 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANA-DVTVVDSSFIDQ 120
SQP +G F ++F++LA+D +ISIH+S +SGT + A + + V +S +
Sbjct: 62 SQPSIGQFVELFEQLAKDYDAVISIHLSKKISGTYQGAVTASGMVEGIKVYPYNSGWSCM 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
A F +AAK+A G + E+I+A+++E+K T+ Y + L +L +GGR+ +I S
Sbjct: 122 AQGFYAIDAAKMALAGKEPEDILARLDELKASTKAYFMVDDLTHLQRGGRLSGSQAVIGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
LL I+ ++ D ++ P K R K + D L + + I +A E A E
Sbjct: 182 LLKIKPLLTFVDDEIVPFEKIRTQKKALNRIFDLLGEDAAKGLPLKSSIIHANREEQALE 241
Query: 240 MKESLQ---PYVKKPISVLETGSIIQTHTGENAWAV 272
+K+ L+ P V IS G +I TH GE A +
Sbjct: 242 IKDELEKRFPTVDFSISYF--GPVIATHLGEGAIGI 275
>gi|153955992|ref|YP_001396757.1| hypothetical protein CKL_3383 [Clostridium kluyveri DSM 555]
gi|146348850|gb|EDK35386.1| Hypothetical protein CKL_3383 [Clostridium kluyveri DSM 555]
Length = 279
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 151/276 (54%), Gaps = 13/276 (4%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + + K+ +I ++PL + Y D D++ L M S P
Sbjct: 1 MEKIKIITDSTADLPDSILKKYNIEVLPLLINFGKDSYKDGIDIDIHTLLHKMDKSDVFP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-RQGATLANADVTVVDSSFI 118
T+Q +F + +D + G +I+SIH+S +SGT ++A L D+ V+D +
Sbjct: 61 STTQVNPQIFLECYDSYIKQGYKIVSIHLSSKMSGTYQSACIAKEMLQTEDIIVIDGMNV 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ QV +AAKL +EG ++EI KI+E+ + + ++L+NLVKGGR+ + +G+I
Sbjct: 121 TSGLGLQVIKAAKLKEEGLKIKEIEDKIKEISPHIKSTLAFNSLDNLVKGGRLSKTAGVI 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGIS---YAGSPE 235
++L I++I+ +++ ++ I K RG+ K+ L ++ + K + E +S + G +
Sbjct: 181 GNILGIKIIVAVENGEMTVIDKVRGS---KRTLRNMVDYIDKKGIKEGEVSILLHVGESD 237
Query: 236 LAQEMKESLQPYVKKPISVL--ETGSIIQTHTGENA 269
+ ++++L+ +K I + E G + H+G A
Sbjct: 238 ILDVLRKNLE---EKKIEFIECEVGCTVGVHSGSRA 270
>gi|147669044|ref|YP_001213862.1| degV family protein [Dehalococcoides sp. BAV1]
gi|146269992|gb|ABQ16984.1| degV family protein [Dehalococcoides sp. BAV1]
Length = 279
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 86/277 (31%), Positives = 140/277 (50%), Gaps = 7/277 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
IKIVTDS+ I P++AK L ITIVPL V D ++ + +F +Q+ P TS
Sbjct: 3 IKIVTDSTADIPPQLAKSLGITIVPLYVRFGEKALKDGVEITQDQFFERLQTESVHPNTS 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD---VTVVDSSFID 119
QP F DV+ LA I+SIH+S LSGT ++A Q L D + V+DS +
Sbjct: 63 QPSPQDFIDVYRELAPTCDGIVSIHISSKLSGTYDSAIQAKKLLGKDAPPIEVIDSRSVS 122
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ A++A G +L+E+ + EK ++ TL+ L GGRIG+ L+
Sbjct: 123 MGLGLLGLLGAEVASSGKNLKEVADTVRSSVEKIQMMGFFDTLKYLALGGRIGKSKALLG 182
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLL+++ ++ + + +L P + R + L + +A ++N +A L + Y +P+ A
Sbjct: 183 SLLSVKPVLVVGNGELLPAGQVRSRSKGMEKLTEFTAGVKN--IAGLSVIYTTTPDEAVA 240
Query: 240 MKESLQPYV-KKPISVLETGSIIQTHTGENAWAVLIR 275
+ + L + +K I + G+ + H G V R
Sbjct: 241 LADRLAEFFPRKQIVISRLGAALGVHAGPGTLFVATR 277
>gi|106895387|ref|ZP_01362483.1| DegV [Clostridium sp. OhILAs]
gi|106773307|gb|EAT29895.1| DegV [Clostridium sp. OhILAs]
Length = 281
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 88/277 (31%), Positives = 149/277 (53%), Gaps = 4/277 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M I+IVTDS + + ++ + +I +VPL+++ D Y D DL +F + ++ LP
Sbjct: 1 MNPIQIVTDSMIDLPKDMIEAHNIVVVPLTIIFDDKEYRDGIDLTNIQFYEKLSQAKELP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFI 118
KTSQ F +VF + E+G I+ I+ S SGT ++A +L + + V D+ +
Sbjct: 61 KTSQVTPNAFMEVFKKSLEEGKDILCINGSSKASGTHQSAVLAKNSLDSERIHVFDTMGL 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
V EA K+ +G +LEEI+ + ++K K + + TLE L KGGR+ + I
Sbjct: 121 SLGGGMYVYEAIKMMADGKNLEEIMKGLHDMKLKVDHIFTVDTLEYLKKGGRLNPMKATI 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGA-KTFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
+++LNI+ I+ ++D +E + K RG+ K K ++ A +N + +GIS+A S E
Sbjct: 181 ATMLNIKPILTVEDGLVESLDKVRGSKKVIGKMIELAKARGENFEGKTIGISHAISLEAL 240
Query: 238 QEMKESLQPYVK-KPISVLETGSIIQTHTGENAWAVL 273
+ ++E ++ + K I V E G I TH G A+
Sbjct: 241 EMLREHVKKELNPKEIVVSEIGCTIGTHAGPGTLALF 277
>gi|150015483|ref|YP_001307737.1| degV family protein [Clostridium beijerinckii NCIMB 8052]
gi|149901948|gb|ABR32781.1| degV family protein [Clostridium beijerinckii NCIMB 8052]
Length = 278
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 148/272 (54%), Gaps = 11/272 (4%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + ++ ++ DI ++PL + Y D ++ E +++ LP
Sbjct: 1 MEKIKIITDSTADLPKDIYEKYDIEVLPLLINFGEESYLDGVEINTDEVFERIRNENILP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-RQGATLANADVTVVDSSFI 118
T+Q F +++ + +G +IISIHMS +SGT ++A L + D+ VVDS +
Sbjct: 61 TTAQVTPNRFVEIYKKYLAEGYKIISIHMSSVMSGTYQSACIAKEMLESQDIIVVDSQNV 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
A+ V +A KL + G ++ E+ K+ ++ K +L + +LE LV+GGRI + +G++
Sbjct: 121 TAALGILVLKAVKLRENGYNISEVEEKLNSIRNKVKLSVYFDSLEYLVRGGRISKTAGMV 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
+L I++I+++KD + K RG K KK + DL + +V + I
Sbjct: 181 GGMLGIKLILEIKDGIMSVKDKIRGNKKAIKKIISDLENATLDYEVPVILIDVNNI---- 236
Query: 238 QEMKESLQPYVK-KPISVLE--TGSIIQTHTG 266
E+KE+L+ Y+K ++ +E GS + H+G
Sbjct: 237 -EVKEALRTYMKDNGVNFIECPVGSTVCIHSG 267
>gi|15893989|ref|NP_347338.1| Uncharacterised protein, DegV family [Clostridium acetobutylicum
ATCC 824]
gi|30179758|sp|Q97L61|Y701_CLOAB UPF0230 protein CA_C0701
gi|15023580|gb|AAK78678.1|AE007585_5 Uncharacterised protein, DegV family [Clostridium acetobutylicum
ATCC 824]
Length = 279
Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 87/279 (31%), Positives = 141/279 (50%), Gaps = 11/279 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M KIKIVTDS+ + + + DI ++PL V V G Y D D+ + ++M P
Sbjct: 1 MEKIKIVTDSTCDLPEYIISKFDIEVLPLMVNVKGKSYFDIVDINFKQLSKIMDEENIFP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFI 118
TSQ F D F + ++G +II I+MS +SGT ++A L + DV V+DS +
Sbjct: 61 TTSQVTPKRFNDCFAKYLKEGYKIICINMSSKMSGTYQSACIAKDMLESEDVVVIDSLNV 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ V +A +L +EG EEI +I E + + L+NL+KGGR+ + +G I
Sbjct: 121 TSGLGVLVLKACRLREEGKSFEEIKNEIIETIPHVKSALAFERLDNLIKGGRLSKTAGTI 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKK-WLDDLSANLQNKQVAELGISYAGS---P 234
+LL I++I+++KD ++ K RG K + LD + NK+ L ++ P
Sbjct: 181 GNLLGIKLILEVKDGEMAIKDKVRGNKKAARVVLDCIKDESMNKEETTLLLNAENDDILP 240
Query: 235 ELAQEMKESLQPYVKKPISVLETGSIIQTHTGENAWAVL 273
L Q++ E +++ E G ++ H+G A V
Sbjct: 241 ILRQKLIEQENKFIE-----CEVGCVVGAHSGTKACGVF 274
>gi|57235089|ref|YP_180856.1| degV family protein [Dehalococcoides ethenogenes 195]
gi|57225537|gb|AAW40594.1| degV family protein [Dehalococcoides ethenogenes 195]
Length = 279
Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 85/277 (30%), Positives = 139/277 (50%), Gaps = 7/277 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
IKIVTDS+ + ++ K L IT+VPL V V+ D D+ + F + PKTS
Sbjct: 3 IKIVTDSTADLPADLVKNLGITVVPLYVHFGTEVFRDGVDINKETFFHRLIHGGIHPKTS 62
Query: 63 QPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANAD--VTVVDSSFID 119
QP FA+V+ LA+D I+SIH+S SGT ++A +GA L+ + V+DS +
Sbjct: 63 QPSPEDFANVYRELAKDNTTGIVSIHISSKFSGTYQSAIEGAKLSGVSCPIEVIDSRLLS 122
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
M + AA ++ G L EI+ + K +L TL + GGR+G+ L+
Sbjct: 123 MGMGLIIKAAAVASRSGKKLGEIVEDCKNSIPKIKLMGFFDTLRYVQVGGRLGKAKILMG 182
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLL ++ ++ + D + +P GR T K + K +A+ + ++ +PE A +
Sbjct: 183 SLLGVKPVLTVADGEYQPC--GRVRNTAKGLERLVEFAKTGKNIADFSVIHSTTPETAHK 240
Query: 240 MKESLQPYVKKPISVL-ETGSIIQTHTGENAWAVLIR 275
+ + L K ++L + G+++ TH G V R
Sbjct: 241 LADMLSDIFPKDQTILAQLGAVLGTHGGPGTLWVAYR 277
>gi|73748060|ref|YP_307299.1| degV family protein [Dehalococcoides sp. CBDB1]
gi|147668910|ref|YP_001213728.1| degV family protein [Dehalococcoides sp. BAV1]
gi|73659776|emb|CAI82383.1| degV family protein [Dehalococcoides sp. CBDB1]
gi|146269858|gb|ABQ16850.1| degV family protein [Dehalococcoides sp. BAV1]
Length = 279
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 81/268 (30%), Positives = 138/268 (51%), Gaps = 7/268 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
IKIVTDS+ + ++ K L IT+VPL V V+ D D+ + F + PKTS
Sbjct: 3 IKIVTDSTADLPADIVKNLGITVVPLYVHFGNEVFRDGVDINKETFFDRLAHGGIHPKTS 62
Query: 63 QPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANAD--VTVVDSSFID 119
QP FA+V+ LA+D A I+SIH+S SGT ++A +GA ++ + V+DS +
Sbjct: 63 QPSPEDFANVYRELAKDNATGIVSIHISSKFSGTYQSAMEGAKISGVSCPIEVIDSRLLS 122
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
M + AA ++ G L E++ + K +L TL + GGR+G+ L+
Sbjct: 123 MGMGLVIKAAAIASRSGKKLGEVVEDCKNNIPKIKLMGFFDTLRYVQVGGRLGKAKILMG 182
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLL ++ ++ + D + +P GR T K + K + ++ + ++ +PE A +
Sbjct: 183 SLLGVKPVLTVADGEYQPC--GRVRNTGKGLERLVEFAKTGKNIVDMSVIHSTTPETAHK 240
Query: 240 MKESLQPYVKKPISVL-ETGSIIQTHTG 266
+ E L K +++ + G+++ TH G
Sbjct: 241 LAEMLSDIFPKDQTIIAQLGAVLGTHGG 268
>gi|32441872|gb|AAP82005.1| unknown [Staphylococcus sp. MRCNS378]
Length = 176
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 61/174 (35%), Positives = 111/174 (63%), Gaps = 2/174 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M K IVTDS+ + E K+ +I ++PLS+ +DG Y+D D+ E++ +++ ++
Sbjct: 1 MAKQIIVTDSTSDLSHEYLKQHNIHVIPLSLTIDGKSYTDQVDISSSEYIDHIENDADV- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPP+G F + +++LA+D +IISIH+S LSGT A Q + + + ++TV+DS I
Sbjct: 60 KTSQPPIGRFIETYEQLAQDDVEIISIHLSSGLSGTYNTAVQASHMVDGNITVIDSKSIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGR 173
+ +Q+ + +L +G EEI+ ++ ++++ +L++ + L L+KGGRI +
Sbjct: 120 FGLGYQIKQIVELISQGTSTEEIVKEMTQLRDNLQLFVVIGQLNQLIKGGRISK 173
>gi|73748263|ref|YP_307502.1| degV family protein [Dehalococcoides sp. CBDB1]
gi|73659979|emb|CAI82586.1| degV family protein [Dehalococcoides sp. CBDB1]
Length = 279
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 85/277 (30%), Positives = 139/277 (50%), Gaps = 7/277 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
IKIVTDS+ I P++AK L ITIVPL V D ++ + +F +Q+ P TS
Sbjct: 3 IKIVTDSTADIPPQLAKSLGITIVPLYVRFGEKALKDGVEITQDQFFERLQTESVHPNTS 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD---VTVVDSSFID 119
QP F DV+ LA I+SIH+S LSGT ++A Q L D + V+DS +
Sbjct: 63 QPSPQDFIDVYRELAPTCDGIVSIHISSKLSGTYDSAIQAKKLLGKDAPPIEVIDSRSVS 122
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ A++A +L+E+ + EK ++ TL+ L GGRIG+ L+
Sbjct: 123 MGLGLLGLLGAEVASSDKNLKEVADTVRSSVEKIQMMGFFDTLKYLALGGRIGKSKALLG 182
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
SLL+++ ++ + + +L P + R + L + +A ++N +A L + Y +P+ A
Sbjct: 183 SLLSVKPVLVVGNGELLPAGQVRSRSKGMEKLTEFTAGVKN--IAGLSVIYTTTPDEAVA 240
Query: 240 MKESLQPYV-KKPISVLETGSIIQTHTGENAWAVLIR 275
+ + L + +K I + G+ + H G V R
Sbjct: 241 LADRLAEFFPRKQIVISRLGAALGVHAGPGTLFVATR 277
>gi|29376133|ref|NP_815287.1| DegV family protein [Enterococcus faecalis V583]
gi|29343595|gb|AAO81357.1| DegV family protein [Enterococcus faecalis V583]
Length = 282
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 87/281 (30%), Positives = 148/281 (52%), Gaps = 12/281 (4%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
KI IVTDS+ + + ++ ++P+ V++DG +Y++ D+E E+ L+ +S+ P T
Sbjct: 2 KIAIVTDSTAYLPERIKDHPNLFVIPIPVILDGKIYNEGIDIEADEYYALLNNSKEFPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGAT--LANADVTVVDSSFI 118
SQP +G +++ +AE G IISIH+S +SG V G T + + DS
Sbjct: 62 SQPALGEVLELYKSIAEQGYDTIISIHLSSGISGFVHTL-HGLTDEIPGVALYPYDSKIT 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
M V A L +E A LEEI AK++ +++ T Y+ + L NLV+GGR+ + LI
Sbjct: 121 SMPMGHMVEAALDLTEEKASLEEIFAKLDLIRDNTYAYLIVEDLNNLVRGGRLTNGAALI 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKT----FKKWLDDLSANLQNKQVAELGISYAGSP 234
+ LL I+ I+ +D ++ K R K +K + + +A ++ +L + +A +
Sbjct: 181 AGLLKIKPILTFEDGKIVLFEKIRSTKKAFARAEKIIGERNAGIEAP--VKLYVIHANNR 238
Query: 235 ELAQEMKESLQP-YVKKPISVLETGSIIQTHTGENAWAVLI 274
+A++ + LQ Y I + G +I TH GE A + I
Sbjct: 239 IVAEKEQAKLQKLYPNAEIEIGHFGPVIGTHLGEKAIGLAI 279
>gi|23098643|ref|NP_692109.1| hypothetical protein OB1188 [Oceanobacillus iheyensis HTE831]
gi|22776870|dbj|BAC13144.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 287
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 82/279 (29%), Positives = 141/279 (50%), Gaps = 9/279 (3%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
I I+TDS+ + + E +I ++PL+V +D + D + + + PKTSQ
Sbjct: 3 ITILTDSACDLSKKYYNENNIEMIPLTVHLDNEEFEDGRTINPKTVYEAMRNGKSPKTSQ 62
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQ-----GATLANADVTVVDSSFI 118
F D+F + AE+ +I I S LSGT ++A+ T +AD+ V+DS
Sbjct: 63 ASAQDFKDIFTKHAEENQSLIYIAFSSELSGTYQSAKMMELEVKETYPDADIYVIDSKCA 122
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
V EAAKLA GA + EII K++ + E + LE L +GGR+ + + +
Sbjct: 123 SFGHGLVVLEAAKLANNGATVNEIIEKVDYHAKHMEHIFTVDDLEYLYRGGRVSKTAAFV 182
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGA-KTFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
LL I+ ++ ++D +L P+ K RG+ K ++ +D + + Q+ + +GIS+ A
Sbjct: 183 GGLLKIKPLLHVEDGKLIPLEKIRGSKKVLQRMVDVMESRGQDFENQTIGISHGDDLSRA 242
Query: 238 QEMKESLQP---YVKKPISVLETGSIIQTHTGENAWAVL 273
+++ E +Q K+ I + GS I +H+G A+
Sbjct: 243 EQLSEMIQEKFNVAKENIIIEMVGSAIGSHSGPGTLALF 281
>gi|154497098|ref|ZP_02035794.1| hypothetical protein BACCAP_01391 [Bacteroides capillosus ATCC
29799]
gi|150273497|gb|EDN00625.1| hypothetical protein BACCAP_01391 [Bacteroides capillosus ATCC
29799]
Length = 280
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 85/278 (30%), Positives = 137/278 (49%), Gaps = 12/278 (4%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
I+I+TDS+ + P + L + ++PLSV V+ D D+ EF + LP TS
Sbjct: 2 IRIITDSTSDLSPARQEALGVDVIPLSVHFGEEVFRDGVDITNAEFYDRLSKVDTLPTTS 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD--VTVVDSSFIDQ 120
Q VFADVF + + G +I+ I +S A+SGT ++A + + + + +VDS +
Sbjct: 62 QINPEVFADVFRKYLDQGDEIVGIFISGAMSGTCQSALIARDMVDGEDRIHIVDSRTVTF 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
A+ V AA L +G E+ AK+EE+ + L + TL+ L GGRI S ++ +
Sbjct: 122 ALGLLVEVAATLRDQGLSAGELAAKLEELAGRLRLLAVVDTLKYLKMGGRISTASAVVGA 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
LLNI I+ +++ +E I K RG K +W+ A K+ +L + A A E
Sbjct: 182 LLNINPIITIENGLVEGIGKARGRKAAFQWI----AKRMEKEAPDLSLPVAFGHSNAPEA 237
Query: 241 KESLQPYVKKPIS-----VLETGSIIQTHTGENAWAVL 273
Q + I + GS++ TH G A ++
Sbjct: 238 MAECQAFFADIIDGATVHASDIGSVVGTHVGPGATGIV 275
>gi|147669717|ref|YP_001214535.1| degV family protein [Dehalococcoides sp. BAV1]
gi|146270665|gb|ABQ17657.1| degV family protein [Dehalococcoides sp. BAV1]
Length = 281
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 77/276 (27%), Positives = 148/276 (53%), Gaps = 8/276 (2%)
Query: 4 IKIVTDSSVTIEPEVAKEL-DITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
++IV DS+ I P++AK + ++ I+PL+V + D D+ EF + N+P T
Sbjct: 3 VQIVIDSTSDITPQMAKAMGNVHIMPLTVSFGNEHFQDGIDITPEEFYTRLPQDENIPTT 62
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA---RQGATLANADVTVVDSSFI 118
+QP G ++ RL+E+ QI+ + +S LSGT ++A ++ + V D++
Sbjct: 63 TQPLPGYVIELVTRLSEETDQILILTLSQKLSGTYQSALYTKKTLESPTCRIEVFDTNLT 122
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ A+ +AKEGA+L++I+ ++ + + TL+ L +GGRIG+ L+
Sbjct: 123 TLGHGLRAIRASDMAKEGANLDQILEELRKPHNYLAGVMYFDTLKYLARGGRIGKAQSLL 182
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
++L+ + I+ ++D ++ P+ + R + +L + +A+ +N + LG+ +A +PE A+
Sbjct: 183 GAMLSFKPIITVQDGEVSPVTRVRSRQAGMDYLYNYAASRKN--IRYLGVEHANTPEDAE 240
Query: 239 EMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVL 273
+ E L + K+ I G +I T G NA V+
Sbjct: 241 ALIERLGNIFPKEKIIRSRIGPVIGTSIGPNAVCVV 276
>gi|46198893|ref|YP_004560.1| degV protein [Thermus thermophilus HB27]
gi|46196517|gb|AAS80933.1| degV protein [Thermus thermophilus HB27]
Length = 280
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 80/275 (29%), Positives = 142/275 (51%), Gaps = 8/275 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
+I +VTDS+ + ++ L + +VPL V + G +Y D ++ E + ++ P T
Sbjct: 2 RITLVTDSTSDLPQDLRGRLGVRVVPLYVNLSGAIYRDWEEITPTEIFQKVREGAAFPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQA 121
SQP FA V+ E+ ++S+H+S LSGTV++A A VTVVD+
Sbjct: 62 SQPSPEDFARVYREALEEADHVLSLHISGKLSGTVQSAELAAQEFPGRVTVVDTQAASLG 121
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
+ V A +L +EG LE ++A++E ++ + ++TLE L +GGRIG + +L
Sbjct: 122 VGMMVLRAKELLEEGQSLEAVLAELERLRRDHFVRFSVATLEFLKRGGRIGGAQAFLGTL 181
Query: 182 LNIRVIMQMKDHQLEPIVKGRGAKTFK-KWLDDLSANLQNKQVAELGISYAGSPE----L 236
LN++ ++ +K+ ++E + RG K + + L A + ++ Y+G + L
Sbjct: 182 LNLKPVLTLKEGRVEAAGRARGEKKAREEILKAFRAWAEGRKRIRAYFLYSGDEDAVAAL 241
Query: 237 AQEMKESLQPYVKKPISVLETGSIIQTHTGENAWA 271
QE+ S P + +S E G++I +HTG +
Sbjct: 242 RQEVLASGLPVEEALVS--ELGAVIASHTGPGTYG 274
>gi|109644733|ref|ZP_01368653.1| degV family protein [Desulfitobacterium hafniense DCB-2]
gi|109642682|gb|EAT52235.1| degV family protein [Desulfitobacterium hafniense DCB-2]
Length = 281
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 142/274 (51%), Gaps = 6/274 (2%)
Query: 6 IVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTSQP 64
++ DSS + +++++ I +VP+ V ++G YS+ D+ F + LPKTSQP
Sbjct: 5 VLVDSSCDLPSDLSQKEGIVVVPMPVSIEGKTYSEGVDIFPAGFYPRFSEFKELPKTSQP 64
Query: 65 PVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANA--DVTVVDSSFIDQAM 122
G D ++ + G ++++IH+S LS T A+ + + + V+DS
Sbjct: 65 NPGTLKDAYEAILAQGHEVVAIHLSSGLSSTFSTAQMVREMCSQPEKIHVIDSLGASLGY 124
Query: 123 KFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLL 182
A +L KE EE A+I +V+ + TL+ LVKGGR+ + +G I LL
Sbjct: 125 GLLALAANRLVKEANSWEEAEAEIFQVRRQMRYVFTPDTLDYLVKGGRVSKTAGFIGGLL 184
Query: 183 NIRVIMQMK-DHQLEPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
+++ I+ + + ++EP+ K R K +K ++ + +++ + E+GIS A PE A+ +
Sbjct: 185 DVKPILNITAEGRIEPLTKVRSRKAALRKLVELIQEEIRHPEEQEIGISQAACPEEARAL 244
Query: 241 KESLQPYVK-KPISVLETGSIIQTHTGENAWAVL 273
E ++ V K + + + G ++ +HTG A+
Sbjct: 245 AEEIKMKVPVKDVIISDIGCVVGSHTGPGTIALF 278
>gi|57234792|ref|YP_181166.1| degV family protein [Dehalococcoides ethenogenes 195]
gi|57225240|gb|AAW40297.1| degV family protein [Dehalococcoides ethenogenes 195]
Length = 279
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 7/277 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
IKIVTDS+ I P++A+ L ITIVPL V D ++ + +F +Q+S P TS
Sbjct: 3 IKIVTDSTADIPPQLAESLGITIVPLYVRFGEKALKDGVEITQDQFFEKLQTSTVHPNTS 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD---VTVVDSSFID 119
QP F DV+ +LA+D I+S+H+S LSGT ++A Q L D + V+DS +
Sbjct: 63 QPSPQDFIDVYQKLAQDCDGIVSVHISSKLSGTYDSAVQAKKLLGNDAPPIEVIDSRSVS 122
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ AA+ A G L E+ + +K ++ TL+ L GGRIG+ L+
Sbjct: 123 MGLGLLGLLAAEEASSGKSLNEVADTVRSAVDKVQMMGFFDTLKYLALGGRIGKSKALLG 182
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
+LL+++ ++ + + +L P + R L + +A ++N +A L + Y +P+ A
Sbjct: 183 ALLSVKPVLVVGEGELLPAGQVRSRSKGMDKLAEFTAGVKN--LAALSVVYTTTPDEAVA 240
Query: 240 MKESLQPYV-KKPISVLETGSIIQTHTGENAWAVLIR 275
+ + L + +K I + G+ + H G V R
Sbjct: 241 LADRLAEFFPRKQIIISRLGAALGVHAGPGTLFVATR 277
>gi|89894401|ref|YP_517888.1| hypothetical protein DSY1655 [Desulfitobacterium hafniense Y51]
gi|109644786|ref|ZP_01368706.1| degV family protein [Desulfitobacterium hafniense DCB-2]
gi|89333849|dbj|BAE83444.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|109642735|gb|EAT52288.1| degV family protein [Desulfitobacterium hafniense DCB-2]
Length = 284
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 83/274 (30%), Positives = 135/274 (49%), Gaps = 5/274 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPK 60
M K I+ DS+ + ++ +E DI +V L+V + + + DL +F ++
Sbjct: 1 MKKTAIIMDSTGYLTNDIIEEHDIRVVTLNVNIGDETFPEIDLTNRDFFGKLEQLSGSST 60
Query: 61 TSQPPVGVFADVFDR-LAEDGAQIISIHMSHALSGTVEAARQGATL-ANADVTVVDSSFI 118
TSQP VG F +V+ LAE +IISIH+S +SGT +A L N + + DS
Sbjct: 61 TSQPSVGAFLEVYKAVLAEGYEEIISIHLSEKISGTYASAIMAKDLLENPHIHIFDSGSS 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ AA A+EG + +EI+ K+E ++ ELY + TLE L +GGRIG S L
Sbjct: 121 ALGLGLLTWAAADWAREGLNAQEILGKLETLRPLCELYFIVDTLEYLHRGGRIGGASALF 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAK--TFKKWLDDLSANLQNKQVAELGISYAGSPEL 236
+LL I+ I+ + + +K ++ +L L +++ + + + G+
Sbjct: 181 GTLLQIKPILYFNTEGIIDVFDKVRSKNRALQRVYKELERALASQKPHRIAVMHVGAEAE 240
Query: 237 AQEMKESL-QPYVKKPISVLETGSIIQTHTGENA 269
A + E L Q Y + I + E G +I TH G A
Sbjct: 241 AVSIAEELSQKYQGQDIRIFEAGPVIATHVGPGA 274
>gi|51892587|ref|YP_075278.1| hypothetical protein STH1449 [Symbiobacterium thermophilum IAM
14863]
gi|51856276|dbj|BAD40434.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 282
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 86/275 (31%), Positives = 151/275 (54%), Gaps = 5/275 (1%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
I+IVTDS+ + E+ +EL I ++PL+V Y D L+ F ++ S + P T+
Sbjct: 3 IRIVTDSTADLPKELCRELGIEVIPLTVRFGEEAYLDGVTLDSDGFWAKLKESPHHPSTA 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGAT-LANADVTVVDSSFIDQA 121
QP G F +V+ R+ E G +I+SIH+S +SGTV +A A L A +++VD+ +
Sbjct: 63 QPAPGDFLEVYRRIHEAGDEIVSIHISSKMSGTVNSAEIAAQMLPEARISIVDTRSVSLG 122
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
+ V AA++A+EG EEI+A + ++ + + TLE L + GRIG+ + L+ L
Sbjct: 123 LGLVVIGAARMAREGKSREEIVAWAHKTCDRMNILFTIDTLEFLQRNGRIGKATALLGGL 182
Query: 182 LNIRVIMQM-KDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
L I++I+Q+ K+ + P K RG ++ F + + + + + + + +A +PE AQ
Sbjct: 183 LGIKLILQVDKEGVVAPADKVRGRSRVFARAREIMHERVPPGRRIRMAVVHAQAPEQAQA 242
Query: 240 MKESLQ-PYVKKPISVLETGSIIQTHTGENAWAVL 273
E ++ Y + V + G+++ H G A V+
Sbjct: 243 WGEEVKRDYQVEEYLVGQLGAVVACHAGPGALGVI 277
>gi|89098396|ref|ZP_01171280.1| DegV family protein [Bacillus sp. NRRL B-14911]
gi|89086945|gb|EAR66062.1| DegV family protein [Bacillus sp. NRRL B-14911]
Length = 283
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 79/279 (28%), Positives = 143/279 (51%), Gaps = 4/279 (1%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
+I +TDS+ I E+ + D+ ++PL++ Y D DL + +++ + +PKT
Sbjct: 5 RIAWITDSTAFITKELEQHQDVYVMPLTIAFSSGTYEDGIDLSSDDLYMKLKAEKEVPKT 64
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQA 121
SQP VG FA++F++L D I++H+S LSGT+ + QGA +A V VDS +
Sbjct: 65 SQPSVGKFAELFEKLKADYDCAIAVHISSKLSGTLNSCMQGAEIAGFPVETVDSKMMSYI 124
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
+ + + +L + D +EI + + E YI L L+ KGGR+ L+ S+
Sbjct: 125 ITGLLNKGIELQSQDTDWKEIAQTLRLEANQFENYILLGNLDQFYKGGRMSGTQYLLGSI 184
Query: 182 LNIRVIMQM-KDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
L ++ I+ + ++ + + K R K ++ ++ L + + ++ ++ I + E AQE
Sbjct: 185 LKVKPIIHVDRNGEFQLFDKVRSEKKAVRRMIELLEESAEKHRIKQVQIMHGNVLEKAQE 244
Query: 240 M-KESLQPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
+ KE L + + + E S I H GE AV+ +E
Sbjct: 245 IEKEILTRFPEMGTFIGEISSTIAVHAGEGTVAVVWHFE 283
>gi|55980920|ref|YP_144217.1| DegV family protein [Thermus thermophilus HB8]
gi|55772333|dbj|BAD70774.1| DegV family protein [Thermus thermophilus HB8]
Length = 280
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 79/275 (28%), Positives = 142/275 (51%), Gaps = 8/275 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
+I +VTDS+ + ++ L + +VPL V + G +Y D ++ E + ++ P T
Sbjct: 2 RITLVTDSTSDLPQDLRGRLGVRVVPLYVNLSGAIYRDWEEITPTEIFQKVREGAAFPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQA 121
SQP FA V+ E+ ++S+H+S LSGTV++A A VTVVD+
Sbjct: 62 SQPSPEDFARVYREALEEADHVLSLHISGKLSGTVQSAELAAQEFPGRVTVVDTQAASLG 121
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
+ V A +L +EG LE ++A++E ++ + ++TLE L +GGRIG + +L
Sbjct: 122 VGMMVLRAKELLEEGQSLEAVLAELERLRRDHFVRFSVATLEFLKRGGRIGGAQAFLGTL 181
Query: 182 LNIRVIMQMKDHQLEPIVKGRGAKTFK-KWLDDLSANLQNKQVAELGISYAGSPE----L 236
LN++ ++ +K+ ++E + RG K + + L A + ++ Y+G + L
Sbjct: 182 LNLKPVLTLKEGRVEAAGRARGEKKAREEILKAFRAWAEGRKRIRAYFLYSGDEDAVAAL 241
Query: 237 AQEMKESLQPYVKKPISVLETGSIIQTHTGENAWA 271
QE+ S P + ++ E G++I +HTG +
Sbjct: 242 RQEVLASGLPVEEALVN--ELGAVIASHTGPGTYG 274
>gi|116494924|ref|YP_806658.1| hypothetical protein LSEI_1438 [Lactobacillus casei ATCC 334]
gi|116105074|gb|ABJ70216.1| hypothetical protein LSEI_1438 [Lactobacillus casei ATCC 334]
Length = 288
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 85/284 (29%), Positives = 144/284 (50%), Gaps = 20/284 (7%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
KI IVTDS+ + + IT+VP+ V++DG VY + D+ EF +++++ P T
Sbjct: 2 KIAIVTDSTCYLPQAEIDKHHITVVPIPVILDGAVYDEGKDITTEEFYAKLKTAKTFPST 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFID 119
+QPP+G +++ LA +G IISIH++ +SG V + + A V V DS
Sbjct: 62 TQPPLGEMLKLYENLANEGYDTIISIHLASTISGFVNTLKGAVDEVQGAKVYVYDSQITV 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
M + V AA++A+ G D E I+A+++ ++ Y ++ L+NLV+GGR+ S I
Sbjct: 122 ILMGWLVLAAAQMAEAGDDPEAILARLDNLRTTMGEYFIVNDLQNLVRGGRLSNASAFIG 181
Query: 180 SLLNIRVIMQMKD--HQLEPIVKGRGAKT--------FKKWLDDLSANLQNKQVAELGIS 229
+L I+ ++ D H++ I K R K F++ LD + ++ +
Sbjct: 182 GMLKIKPLLTFDDQSHKIVAIEKIRSIKKAYSRVETLFQEELDRVDYPVRAVVI------ 235
Query: 230 YAGSPELAQEMKESL-QPYVKKPISVLETGSIIQTHTGENAWAV 272
+A P+ A L Q + P + G ++ TH GE A A+
Sbjct: 236 HANDPDEANRWLADLQQKFPTVPFELSYFGPVVGTHLGEKAIAL 279
>gi|150261199|pdb|2DT8|A Chain A, Fatty Acid Binding Of A Degv Family Protein From Thermus
Thermophilus
Length = 280
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 79/275 (28%), Positives = 142/275 (51%), Gaps = 8/275 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
+I +VTDS+ + ++ L + +VPL V + G +Y D ++ E + ++ P T
Sbjct: 2 RITLVTDSTSDLPQDLRGRLGVRVVPLYVNLSGAIYRDWEEITPTEIFQKVREGAAFPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQA 121
SQP FA V+ E+ ++S+H+S LSGTV++A A VTVVD+
Sbjct: 62 SQPSPEDFARVYREALEEADHVLSLHISGKLSGTVQSAELAAQEFPGRVTVVDTQAASLG 121
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
+ V A +L +EG LE ++A++E ++ + ++TLE L +GGRIG + +L
Sbjct: 122 VGXXVLRAKELLEEGQSLEAVLAELERLRRDHFVRFSVATLEFLKRGGRIGGAQAFLGTL 181
Query: 182 LNIRVIMQMKDHQLEPIVKGRGAKTFK-KWLDDLSANLQNKQVAELGISYAGSPE----L 236
LN++ ++ +K+ ++E + RG K + + L A + ++ Y+G + L
Sbjct: 182 LNLKPVLTLKEGRVEAAGRARGEKKAREEILKAFRAWAEGRKRIRAYFLYSGDEDAVAAL 241
Query: 237 AQEMKESLQPYVKKPISVLETGSIIQTHTGENAWA 271
QE+ S P + ++ E G++I +HTG +
Sbjct: 242 RQEVLASGLPVEEALVN--ELGAVIASHTGPGTYG 274
>gi|116494715|ref|YP_806449.1| hypothetical protein LSEI_1221 [Lactobacillus casei ATCC 334]
gi|116104865|gb|ABJ70007.1| hypothetical protein LSEI_1221 [Lactobacillus casei ATCC 334]
Length = 285
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 85/271 (31%), Positives = 138/271 (50%), Gaps = 7/271 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKE-LDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPK 60
KI IV DS + V E +I +VPL++ ++G Y DA D+ EF + ++ LP+
Sbjct: 4 KIAIVVDSGSDVPQSVLDENKNIAVVPLNITMNGHNYLDAVDITPDEFYSALATAETLPQ 63
Query: 61 TSQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGATLANAD-VTVVDSSFI 118
TS P + DRL G QI+ I +S ALS T + A AD VT++D+ I
Sbjct: 64 TSSPSPQAAKEAMDRLFAAGYQQILGITISSALSVTNNVFQLAAQDFPADTVTILDTKSI 123
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
Q AA L G +++IAK+ K+ +Y + TL+ L GGRIGRV+GL+
Sbjct: 124 GIGSGIQAAYAASLINAGESFQDVIAKVRASIVKSRIYFYVPTLKYLSAGGRIGRVAGLV 183
Query: 179 SSLLNIRVIMQMKDHQL-EPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPEL 236
S+L+I+ ++ + P+ K R K +K ++ + + N LG+++ +P L
Sbjct: 184 GSVLHIKPVISCDPEGVYYPLFKARSEEKAIRKLVEQVKTDCLNSAHYRLGVAHGQNPAL 243
Query: 237 AQEMKESLQPYVKKPISVL-ETGSIIQTHTG 266
+++ E L+ +P+ + E + HTG
Sbjct: 244 VKKLAEKLREVTGRPVDFIGEISPSLGVHTG 274
>gi|29832033|ref|NP_826667.1| hypothetical protein SAV5490 [Streptomyces avermitilis MA-4680]
gi|29609151|dbj|BAC73202.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 281
Score = 114 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 13/271 (4%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPK--- 60
+ IVTDS+ + P + IT VPL+V V D LEEG + ++ L K
Sbjct: 5 VAIVTDSTAYLLPRTMERHGITAVPLTV-----VLGDQALEEGTEISARSLAQALQKRRP 59
Query: 61 --TSQPPVGVFADVFDRLAEDGA-QIISIHMSHALSGTVEAARQGATLANADVTVVDSSF 117
TS+P +FA+ + + AE GA +I+S+H+S +SGT +AA Q A A V VVD+
Sbjct: 60 VTTSRPSPQLFAETYRKAAEAGATEIVSLHLSSEISGTYDAAVQAAREAPVPVRVVDTGM 119
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
+ A+ F AA+ G ++E + E+ T Y + L+ L +GGRIG L
Sbjct: 120 VAMALGFCALAAAETVGAGGTVDEAVTAAEKRAAGTSTYFYVDNLDYLRRGGRIGAAQAL 179
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
+ S L ++ ++Q+ D ++E + K R A L+++ A ++ + + +PE A
Sbjct: 180 LGSALAVKPLLQLDDGRIELLEKVRTASKAIARLEEIIAERAGSAQVDIAVHHLAAPERA 239
Query: 238 QEMKESLQPYVK--KPISVLETGSIIQTHTG 266
+ + L+ V + V E G++I HTG
Sbjct: 240 SALADRLRARVPGVADLHVSEVGAVIGAHTG 270
>gi|73748950|ref|YP_308189.1| degV family protein [Dehalococcoides sp. CBDB1]
gi|73660666|emb|CAI83273.1| degV family protein [Dehalococcoides sp. CBDB1]
Length = 277
Score = 114 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 146/274 (53%), Gaps = 8/274 (2%)
Query: 6 IVTDSSVTIEPEVAKEL-DITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTSQ 63
+V DS+ I P++AK + ++ I+PL+V + D D+ EF + N+P T+Q
Sbjct: 1 MVIDSTSDITPQMAKAMGNVHIMPLTVSFGNEHFQDGIDITPEEFYTRLPQDENIPTTTQ 60
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA---RQGATLANADVTVVDSSFIDQ 120
P G ++ RL+E+ QI+ + +S LSGT ++A ++ + V D++
Sbjct: 61 PLPGYVIELVTRLSEETDQILILTLSQKLSGTYQSALYTKKTLESPTCRIEVFDTNLTTL 120
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
+ A+ +AKEGA+L++I+ ++ + + TL+ L +GGRIG+ L+ +
Sbjct: 121 GHGLRAIRASDMAKEGANLDQILEELRKPHNYLAGVMYFDTLKYLARGGRIGKAQSLLGA 180
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
+L+ + I+ ++D ++ P+ + R + +L + +A+ +N + LG+ +A +PE A+ +
Sbjct: 181 MLSFKPIITVQDGEVSPVTRVRSRQAGMDYLYNYAASRKN--IRYLGVEHANTPEDAEAL 238
Query: 241 KESL-QPYVKKPISVLETGSIIQTHTGENAWAVL 273
E L + K+ I G +I T G NA V+
Sbjct: 239 IERLGNIFPKEKIIRSRIGPVIGTSIGPNAVCVV 272
>gi|51894296|ref|YP_076987.1| hypothetical protein STH3161 [Symbiobacterium thermophilum IAM
14863]
gi|51857985|dbj|BAD42143.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 299
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 72/212 (33%), Positives = 113/212 (53%), Gaps = 3/212 (1%)
Query: 6 IVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLPKTSQP 64
+V D V + + ++ + IVPL+V Y S D+ F + ++ P TSQP
Sbjct: 9 LVVDGGVDLPEALIEQYGLHIVPLTVNFGDESYQSGVDMTPAAFYQRLRERGEFPTTSQP 68
Query: 65 PVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQG-ATLANADVTVVDSSFIDQAMK 123
VG + + R AE G I+S+H+S LSG+ AA A + D+T+VD+ + M
Sbjct: 69 AVGDYVTAYRRAAEAGLPILSLHLSCGLSGSYNAASAARALVPELDITLVDTRTLSGEMA 128
Query: 124 FQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLLN 183
QV AA++A++G + EI IE V + LY L L+ L KGGRIGRVS + LL
Sbjct: 129 LQVLVAAEMAEQGRSIAEIREVIEAVNASSHLYFTLDKLDYLRKGGRIGRVSAAVGGLLG 188
Query: 184 IRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLS 215
IR I+ + I G+ A++F++ ++ ++
Sbjct: 189 IRPIVTVDKSTGTYIAAGK-ARSFRRAVETIA 219
>gi|94985393|ref|YP_604757.1| degV family protein [Deinococcus geothermalis DSM 11300]
gi|94555674|gb|ABF45588.1| degV family protein [Deinococcus geothermalis DSM 11300]
Length = 286
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 84/271 (30%), Positives = 141/271 (52%), Gaps = 11/271 (4%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
I I+TDS+ + P++ + I VPL V+ DG ++ D D+ + R ++ + P TS
Sbjct: 6 IAIITDSTSDLGPDLRSQNGIRSVPLYVLFDGKMHKDGLDITPADLFRGLKEGKKTPSTS 65
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAM 122
QP F V+ E Q++SIH+S LSGTV +AR A VTVVDS + +
Sbjct: 66 QPSPAEFTAVYREALETADQVLSIHISGQLSGTVGSARLAAQEFGDRVTVVDSRSVSMGL 125
Query: 123 KFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLL 182
QV AA+ A+EG + EI+A++E V ++ ++ + TLE L GRIG + L+ LL
Sbjct: 126 GMQVLRAAQRAREGRSVPEIVAELERVAQQADIRFTVDTLEFLRINGRIGGAAALLGGLL 185
Query: 183 NIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANL-------QNKQVAELGISYAGSPE 235
NI+ I+ +K+ ++E + RG KK + D+ ++ Q + ++ G +
Sbjct: 186 NIKPILVVKNGRVEAGGRVRG---HKKAMQDIVDHVRRYVETHQQQGTRAAFLATVGGED 242
Query: 236 LAQEMKESLQPYVKKPISVLETGSIIQTHTG 266
+E++ L + + G+++ TH G
Sbjct: 243 YLREVRAGLSGVSFEDLGDHSLGAVVATHAG 273
>gi|84495879|ref|ZP_00994733.1| hypothetical protein JNB_00130 [Janibacter sp. HTCC2649]
gi|84382647|gb|EAP98528.1| hypothetical protein JNB_00130 [Janibacter sp. HTCC2649]
Length = 280
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 80/273 (29%), Positives = 143/273 (52%), Gaps = 5/273 (1%)
Query: 6 IVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTSQP 64
+VTDS+ + ++ + I +VPL V+V G + D+ GE ++ R + TS+P
Sbjct: 5 LVTDSTAYLSADLIEAHGIGVVPLHVVVGGQERREGVDVAAGEVADALRHFRPV-STSRP 63
Query: 65 PVGVFADVFDRLAEDGA-QIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAMK 123
F D++ LA+ GA I+S+H+S LS T+ +A+ A + VTV+DS + AM
Sbjct: 64 APQAFLDLYRELADKGADSIVSVHISSDLSSTLGSAQLAAQQSPVPVTVIDSRSMGMAMG 123
Query: 124 FQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLLN 183
+ V A LA+ G EE+ + + + TLE+L +GGRIG+ + L+ S L
Sbjct: 124 YAVLAGAALAEHGVTAEEVADHVRARCSNATVVFYVDTLEHLRRGGRIGKANALVGSALA 183
Query: 184 IRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEMKES 243
I+ I+ ++D + P+ + R + L++L+ Q ++ + + S E A+++ E
Sbjct: 184 IKPILGLQDGAIVPLERVRTSSRAIARLEELAVEAAGSQRVDVAVHHLDSAERAEKLAER 243
Query: 244 LQPYVK--KPISVLETGSIIQTHTGENAWAVLI 274
LQ ++ + +LE G+++ H G A+ I
Sbjct: 244 LQSRIEGIEDFQLLELGAVVGAHVGPGTLAIAI 276
>gi|153814483|ref|ZP_01967151.1| hypothetical protein RUMTOR_00696 [Ruminococcus torques ATCC 27756]
gi|145847977|gb|EDK24895.1| hypothetical protein RUMTOR_00696 [Ruminococcus torques ATCC 27756]
Length = 287
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 88/285 (30%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLP 59
M+KI +VTDS+ I E AKEL I ++P+ +DG +Y D L + +F +++ ++
Sbjct: 1 MSKIAVVTDSNSGITQERAKELGIYVLPMPFFIDGELYLEDITLTQEQFYEKLRADSDI- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
TSQP G ++++ + ++ +I+ I MS LS T E A A V VVD+ I
Sbjct: 60 STSQPSPGNVMELWESVLKEYDEIVCIPMSSGLSSTCETAMSIAREYKGKVYVVDNQRIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ V +A L +G EEI +E+ K + +YI + TL+ L KGGRI + I
Sbjct: 120 VTQEQSVYDAMYLRDKGMCAEEIKNILEKEKLQASIYITVDTLKYLKKGGRITPAAAAIG 179
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAE------LGISYAGS 233
++LN++ ++Q++ +L+ K RG K KK + + N++ A+ LG++Y S
Sbjct: 180 TVLNLKPVLQIQGEKLDAFAKVRGWKAAKKTMLNAIEKDLNERFADVKEDIILGMAYTCS 239
Query: 234 PELAQEMKESLQ------PYVKKPISVLETGSIIQTHTGENAWAV 272
E A E K+ + +++ P+S+ + H G A AV
Sbjct: 240 KEEAMEWKQEIMNRFPGYEFLEAPLSL-----SVSCHIGPGAMAV 279
>gi|57234215|ref|YP_181748.1| degV family protein [Dehalococcoides ethenogenes 195]
gi|57224663|gb|AAW39720.1| degV family protein [Dehalococcoides ethenogenes 195]
Length = 284
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 138/273 (50%), Gaps = 7/273 (2%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPK 60
M + IVTD++ I E+ ++ I ++P+ V++DG VY D +L+ G F R+++ S K
Sbjct: 1 MANVAIVTDTTACIPSELVRKYQIEVIPIDVVIDGKVYPDNELKLGRFYRMLKESPLTAK 60
Query: 61 TSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLA-----NADVTVVDS 115
T G + + F RLA QI+ I SG A + A N + V+
Sbjct: 61 TIGSVPGPYIEAFSRLASRTDQILCITEPVRFSGMFNAVQLAAMQVLEKQKNLCIKVIPC 120
Query: 116 SFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVS 175
+ V EAA+ A+ G L ++A++ + ++ LY L T + L++GGRI +++
Sbjct: 121 ETAAAGLGLVVMEAARQAESGKSLNNLVAQVNTLMQRVYLYATLDTFDYLIRGGRIPKIA 180
Query: 176 GLISSLLNIRVIMQMKDHQLEPIVKGRGA-KTFKKWLDDLSANLQNKQVAELGISYAGSP 234
L S+L I+ + +++ + I R A K + LD ++ +++ K + +A +
Sbjct: 181 ALADSVLQIKPVFTLRNGDAQTIALPRTAEKALQNILDLMTEHVKGKGKLTAAVMHADAL 240
Query: 235 ELAQEMKESL-QPYVKKPISVLETGSIIQTHTG 266
E A +++S+ + Y + I ++E ++ HTG
Sbjct: 241 ERAHGLEQSIKEKYPQAEILLMEFTPVMGVHTG 273
>gi|145621688|ref|ZP_01777654.1| degV family protein [Petrotoga mobilis SJ95]
gi|144947712|gb|EDJ82740.1| degV family protein [Petrotoga mobilis SJ95]
Length = 282
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 77/282 (27%), Positives = 151/282 (53%), Gaps = 5/282 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPK 60
M KI IVTD++ I+P+ +E+ I V L V + D++ +F +++S +P
Sbjct: 1 MPKIGIVTDNTCDIDPKQLEEMGIGCVSLYVKMKDKFEKAVDIDVDDFYEFLKTSDYIPA 60
Query: 61 TSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-VTVVDSSFID 119
TSQP F +V+ ++ +D ++IS+H+S LSGT +AR A + + +V+S
Sbjct: 61 TSQPTPQDFEEVYKKMLKDYDELISVHLSGKLSGTYNSARIAAKEVDEKRIHIVESYEAT 120
Query: 120 QAMKFQVTEAAKLAKEG-ADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ + V E KL G +EE+ + +E +EK +Y + +L L KGGRIG+ + +
Sbjct: 121 WGLGYVVLELKKLIDSGDYSIEELKSFVEHFQEKVNVYFTVGSLNYLAKGGRIGKATAFV 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNK-QVAELGISYAGSPELA 237
S+LNI+ ++++++ ++ P+ + RG K L L+ + + ++ + + + GS ++
Sbjct: 181 GSMLNIKPLLKLENGEILPVKRIRGYNKIIKELTTLAMEEKGRGELKNITVEHTGSLKIG 240
Query: 238 QE-MKESLQPYVKKPISVLETGS-IIQTHTGENAWAVLIRYE 277
+ + E ++ V + + E II H G ++ ++ +E
Sbjct: 241 GDLLDEVVKLGVPREKIIFEPMDIIIGMHLGPDSGGIVTTWE 282
>gi|73748951|ref|YP_308190.1| degV family protein [Dehalococcoides sp. CBDB1]
gi|73660667|emb|CAI83274.1| degV family protein [Dehalococcoides sp. CBDB1]
Length = 310
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 89/277 (32%), Positives = 145/277 (52%), Gaps = 9/277 (3%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
+KIVTDS+V + PE KEL ITIVP+ VM Y D D+ + E M + TS
Sbjct: 3 VKIVTDSTVDLLPETIKELGITIVPVYVMSGNKTYRDGLDITQTEIYNRMLTGEQF-TTS 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLA--NADVTVVDSSFIDQ 120
QP FA V+ L+++ QI+S+ MS LSGT +A QG LA ++++ ++D+
Sbjct: 62 QPTPADFASVYKNLSKETDQIVSLIMSAKLSGTYNSAVQGRELAKSSSNIELIDTKATSG 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
A+ T+AA++AK G +II + ++ L T++ +++ GR+ S LIS
Sbjct: 122 ALGLLATQAAEMAKMGESAGKIIDTVRNNIPHVHIWALLDTVKYVLRSGRLSSASNLISG 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQ-NKQVAELGISYAGSPELAQE 239
+L+IR ++ +++ L P R T K L+ L+ ++ N+ V + I + AQ
Sbjct: 182 VLSIRPMITLREGSLWPASIHR---TRNKGLEKLAELVKTNRNVEAVQIVQSVDLAEAQT 238
Query: 240 MKESLQPYV-KKPISVLETGSIIQTHTGENAWAVLIR 275
+KE L ++ + I V + G + H G V I+
Sbjct: 239 LKEKLADFIDQSKIHVSQLGPALGVHGGPGTLVVAIK 275
>gi|147669718|ref|YP_001214536.1| degV family protein [Dehalococcoides sp. BAV1]
gi|146270666|gb|ABQ17658.1| degV family protein [Dehalococcoides sp. BAV1]
Length = 310
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 89/277 (32%), Positives = 144/277 (51%), Gaps = 9/277 (3%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
+KIVTDS+V + PE KEL ITIVP+ VM Y D D+ + E M + TS
Sbjct: 3 VKIVTDSTVDLLPETIKELGITIVPVYVMSGNKTYRDGLDITQTEIYNRMLTGEQF-TTS 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLA--NADVTVVDSSFIDQ 120
QP FA V+ L+++ QI+S+ MS LSGT +A QG LA ++++ ++D+
Sbjct: 62 QPTPADFASVYKNLSKETDQIVSLIMSAKLSGTYNSAVQGRELAKSSSNIELIDTKATSG 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
A+ T+AA++AK G II + ++ L T++ +++ GR+ S LIS
Sbjct: 122 ALGLLATQAAEMAKMGESAGNIIDTVRNNIPHVHIWALLDTVKYVLRSGRLSSASNLISG 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQ-NKQVAELGISYAGSPELAQE 239
+L+IR ++ +++ L P R T K L+ L+ ++ N+ V + I + AQ
Sbjct: 182 VLSIRPMITLREGSLWPASIHR---TRNKGLEKLAELVKTNRNVEAVQIVQSVDLAEAQT 238
Query: 240 MKESLQPYV-KKPISVLETGSIIQTHTGENAWAVLIR 275
+KE L ++ + I V + G + H G V I+
Sbjct: 239 LKEKLADFIDQSKIHVSQLGPALGVHGGPGTLVVAIK 275
>gi|57233958|ref|YP_181979.1| degV family protein [Dehalococcoides ethenogenes 195]
gi|57224406|gb|AAW39463.1| degV family protein [Dehalococcoides ethenogenes 195]
Length = 311
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 87/278 (31%), Positives = 145/278 (52%), Gaps = 11/278 (3%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
+KIVTDS+V + PE KEL IT+VP+ VM Y D D+ + E M TS
Sbjct: 3 VKIVTDSTVDLLPETIKELGITVVPVYVMSGNKTYRDGLDISQTEIYNRMLEGEQF-TTS 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLA--NADVTVVDSSFIDQ 120
QP FA+ + L+++ QI+S+ M LSGT +A QG LA ++++ ++D+
Sbjct: 62 QPTPADFANAYKTLSKETDQIVSLIMGAKLSGTYNSALQGRELAQSSSNIELIDTKATSG 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
A+ T+AA++AK G I+ I+ + ++ L T++ ++K GR+ S LIS
Sbjct: 122 ALGLLATQAAEMAKMGESAGNIVNSIKSYIPQVHIWALLDTIKYVLKSGRLSSASNLISG 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE- 239
+L+IR ++ ++D L P R T K ++ L+ ++N + E + S +LA+
Sbjct: 182 VLSIRPMLTLRDGSLWPASIHR---TRNKGIEKLTELVKNNRNLE-AVQIVQSVDLAEAH 237
Query: 240 -MKESLQPYV-KKPISVLETGSIIQTHTGENAWAVLIR 275
+KE L ++ + I + + G + H G V IR
Sbjct: 238 GIKEKLADFIDQSKIHISQLGPALGVHGGPGTLVVAIR 275
>gi|89894347|ref|YP_517834.1| hypothetical protein DSY1601 [Desulfitobacterium hafniense Y51]
gi|89333795|dbj|BAE83390.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 281
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 75/274 (27%), Positives = 141/274 (51%), Gaps = 6/274 (2%)
Query: 6 IVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTSQP 64
++ DSS + +++++ I +VP+ V ++G YS+ D+ F + LPKTSQP
Sbjct: 5 VLVDSSCDLPSDLSQKEGIVVVPMPVSIEGKTYSEGVDIFPAGFYPRFSEFKELPKTSQP 64
Query: 65 PVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANA--DVTVVDSSFIDQAM 122
G D ++ + G ++++IH+S LS T A+ + + + V+DS
Sbjct: 65 NPGTLKDAYEAILAQGHEVVAIHLSSGLSSTFSTAQMVREMCSQPEKIHVIDSLGASLGY 124
Query: 123 KFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLL 182
A +L KE EE A+I +V+ + TL+ LVKGGR+ + +G I LL
Sbjct: 125 GLLALAANRLVKEANSWEEAEAQIFQVRRQMRYVFTPDTLDYLVKGGRVSKTAGFIGGLL 184
Query: 183 NIRVIMQMK-DHQLEPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
+++ I+ + + ++EP+ K R K +K ++ + +++ + E+GIS A E A+ +
Sbjct: 185 DVKPILNITAEGRIEPLTKVRSRKAALRKLVELIQEEIRHPEEQEIGISQAACLEEARAL 244
Query: 241 KESLQPYVK-KPISVLETGSIIQTHTGENAWAVL 273
E ++ V K + + + G ++ +HTG A+
Sbjct: 245 AEEIKMKVPVKDVIISDIGCVVGSHTGPGTIALF 278
>gi|114845315|ref|ZP_01455727.1| degV family protein [Thermoanaerobacter ethanolicus X514]
gi|114804665|gb|EAU56494.1| degV family protein [Thermoanaerobacter ethanolicus X514]
Length = 280
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 78/248 (31%), Positives = 130/248 (52%), Gaps = 4/248 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KI IVTDS I ++ K I IVPL++ +DGV Y D D+ + EF RL++ + +P
Sbjct: 1 MEKIAIVTDSLSDIPEDLVKTYRIFIVPLTINIDGVSYKDGVDITKEEFYRLLREGK-MP 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-VTVVDSSFI 118
T+Q F +VF L + II+I ++ SGT ++A + + + V+DS
Sbjct: 60 TTTQVSPVEFMEVFKDLLKSYDYIIAIILTSKFSGTYQSAVIAKDMVDPKRIEVIDSRHF 119
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
V +AAK+A GA EEI+ K+ ++ K + +L+ L +GGR+ + I
Sbjct: 120 TLGNGMLVLQAAKMAVAGASKEEIVEKVYDLIPKIRYIMAFDSLDYLYRGGRLPKSQAFI 179
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQ-NKQVAELGISYAGSPELA 237
++LNI+ I+ D +L+ + K RG K +W+ D N + E+G+ + E
Sbjct: 180 GNILNIKPILMNDDGELKIVDKVRGQKKVIRWMIDYMKNTGVDFTDREVGLIHTDKEEFL 239
Query: 238 QEMKESLQ 245
E++ +L+
Sbjct: 240 NEIEAALR 247
>gi|146296319|ref|YP_001180090.1| degV family protein [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409895|gb|ABP66899.1| degV family protein [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 280
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 89/278 (32%), Positives = 136/278 (48%), Gaps = 12/278 (4%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKTS 62
+ IVTDS+ + E+ ++ I +VPL+V Y D D++ F + +QSS LP+TS
Sbjct: 3 VTIVTDSTADLSLEMYEKFGIEMVPLTVYFKDEAYKDWVDIDPVSFYQKLQSSLELPRTS 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-VTVVDSSFIDQA 121
QP F VF E G +++SIH+S LSGT +A + ++ + +D
Sbjct: 63 QPSPEQFLKVFKEELEKGNEVVSIHLSSKLSGTYNSACIAKEMIGSEKIYPIDGRTASIG 122
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
A +LA EG +EI IE+ K+ + TLE L KGGRI + ++
Sbjct: 123 TGILAILAKRLADEGRSGKEIADIIEKKKKAIRHLFAVETLEYLKKGGRISPAKATLGNV 182
Query: 182 LNIRVIMQMKDHQLEPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
LNI+ I+ + D +EP K RG K + +D++ G SYAGS + A+E
Sbjct: 183 LNIKPILHIVDGVVEPFDKVRGMKRAIPRIIDEIKQKGLKLTKQLCGFSYAGSLDEAKEY 242
Query: 241 KESLQPYVKKPIS-----VLETGSIIQTHTGENAWAVL 273
E +KK +S V + GS+I T+ G A +
Sbjct: 243 VE----MIKKELSPGELIVTQIGSVIGTYVGPGTVAFI 276
>gi|145955990|ref|ZP_01804990.1| hypothetical protein CdifQ_04000592 [Clostridium difficile
QCD-32g58]
Length = 282
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 10/280 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M +KI+ DS + ++ + DI IV L+V+++ Y D D+ EF + ++ P
Sbjct: 1 MKNLKIICDSLSDVPKDLLDKYDIDIVSLTVILEEREYKDRIDISGDEFYKRLREENVYP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQ F ++F++ + +I+ I S +GT ++A + + DS+ +
Sbjct: 61 KTSQATYAQFKEIFEKYTNEDREILYIAGSATATGTYQSAVMAKNDVDGKIYTYDSNLLC 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
V +A +LA EG ++EI+ ++E+KEK + + TLE L KGGRI I
Sbjct: 121 MGTGLLVIKAGELASEGKSVDEILPVLDELKEKAFVIFSVDTLEYLQKGGRISSTKAAIG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAK-TFKKWLDDLSANLQN---KQVAELGIS--YAGS 233
S+LNI+ I++++D + I + RG K K ++ + +N + Q+ +G S +
Sbjct: 181 SILNIKPILEIRDGLVSQISQVRGKKNVISKMMELIKSNCGDDLSDQIVYIGYSDDFKEK 240
Query: 234 PELAQEMKESLQPYVKKPISVLETGSIIQTHTGENAWAVL 273
+L++ M++ L+P K I + G I H G ++
Sbjct: 241 EQLSKVMQDELRP---KEIRFFQIGVCIGAHAGPGVTGII 277
>gi|89095965|ref|ZP_01168859.1| degV family protein [Bacillus sp. NRRL B-14911]
gi|89089711|gb|EAR68818.1| degV family protein [Bacillus sp. NRRL B-14911]
Length = 279
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 84/278 (30%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTS 62
+ +VTDS+ I E+ L+I ++PLSV+ Y + E + LP TS
Sbjct: 2 RTAVVTDSTAYIPKELRDRLNIHMIPLSVIFGNETYEEEVEITAEAFYEEVKHKELPTTS 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-RQGATLANADVTVVDSSFIDQA 121
QP G F ++F++L+ D +ISIH+S +SGT + A G+ + DS
Sbjct: 62 QPSTGQFVELFEKLSADYDAVISIHLSSGISGTYQGAVTAGSMVEGIRAYPFDSEISCMV 121
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
F V EAA++A G D ++I++++E++K+ Y + L +L +GGR+ LI SL
Sbjct: 122 QGFYVIEAAEMAAAGKDPQDIMSRLEKMKQTVRAYFMVDDLSHLQRGGRLSSAQALIGSL 181
Query: 182 LNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELG-------ISYAGSP 234
L ++ ++ +D + P K R K K + DL + A G I +A
Sbjct: 182 LQVKPLLHFQDKVIVPFEKIRTRKKAMKRIADLLGD------AAAGGGDYRAVIIHANRE 235
Query: 235 ELAQEMKESLQ---PYVKKPISVLETGSIIQTHTGENA 269
+ A E K L+ P V+ I G +I TH GE +
Sbjct: 236 KEADEWKAELEKELPNVEFMIGYF--GPVIGTHLGEGS 271
>gi|76797353|ref|ZP_00779679.1| DegV [Thermoanaerobacter ethanolicus ATCC 33223]
gi|76587287|gb|EAO63733.1| DegV [Thermoanaerobacter ethanolicus ATCC 33223]
Length = 280
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 78/248 (31%), Positives = 130/248 (52%), Gaps = 4/248 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KI IVTDS I ++ K I IVPL++ +DGV Y D D+ + EF L++ + +P
Sbjct: 1 MEKIAIVTDSLSDIPEDLVKTYRIFIVPLTINIDGVSYKDGVDITKEEFYGLLKEGK-MP 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-VTVVDSSFI 118
T+Q F +VF L + II+I +S LSGT ++A + + + ++DS
Sbjct: 60 TTTQASPVEFMEVFKDLLKSYDYIIAIILSSKLSGTYQSAVIAKDMVDPKRIEIIDSRHY 119
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
V +AAK+A GA EEI+ K+ ++ K + +L+ L +GGR+ + I
Sbjct: 120 SLGNGMLVLQAAKMAVAGASREEIVQKVYDLIPKIRYIMAFDSLDYLYRGGRLPKSQAFI 179
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQ-NKQVAELGISYAGSPELA 237
++LNI+ I+ D +L+ + K RG K +W+ D N + E+G+ + E
Sbjct: 180 GNILNIKPILMNDDGELKIVDKVRGQKKVIRWMIDYMKNTGIDFTDREVGLIHTDKEEFL 239
Query: 238 QEMKESLQ 245
E++ +L+
Sbjct: 240 NEIEAALR 247
>gi|20807934|ref|NP_623105.1| hypothetical protein TTE1491 [Thermoanaerobacter tengcongensis MB4]
gi|30179839|sp|Q8R9U5|Y1491_THETN UPF0230 protein TTE1491
gi|20516503|gb|AAM24709.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 280
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 81/277 (29%), Positives = 145/277 (52%), Gaps = 5/277 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KI IVTDS I ++ K I +VPL++ +DG Y D D+++ EF +L++ + +P
Sbjct: 1 MEKIAIVTDSLSDIPEDLIKTYGIFVVPLTINIDGKSYKDGVDIKKEEFYKLLREGK-MP 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-VTVVDSSFI 118
T+Q F +VF+ L + +I+I ++ SGT ++A + + + + V+DS
Sbjct: 60 TTTQASPVEFMEVFEDLLKSFDYVIAIILTSKFSGTYQSAVIARDMVDKNRIEVIDSRHF 119
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
V +AA++A EGA EEI++ + E + + +L+ L +GGR+ R +I
Sbjct: 120 TLGNGMLVLKAARMAVEGASKEEIVSTVYETIPRIRGIMVFDSLDYLYRGGRLSRTQSII 179
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQ-NKQVAELGISYAGSPELA 237
+LN++ I+ +D +L+ I K RG K +W+ D N + E+G+ + E
Sbjct: 180 GGILNVKPILTNEDGELKVIDKVRGQKKAIRWIIDYMKNTGIDFAEREVGLIHTDKEEFL 239
Query: 238 QEMKESLQPYVKKPISVL-ETGSIIQTHTGENAWAVL 273
E++ +L+ ++ + + G I TH G +A V
Sbjct: 240 NEIEAALRSELEITRFIRSQAGCGIGTHAGPDAAGVF 276
>gi|126698146|ref|YP_001087043.1| hypothetical protein CD0567 [Clostridium difficile 630]
gi|115249583|emb|CAJ67400.1| conserved hypothetical protein [Clostridium difficile 630]
Length = 282
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M +KI+ DS + ++ + DI IV L+V+++ Y D D+ EF + ++ P
Sbjct: 1 MKNLKIICDSLSDVPKDLLDKYDIDIVSLTVILEEREYKDRIDISGDEFYKRLREENVYP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQ F ++F++ + +I+ I S +GT ++A + + DS+ +
Sbjct: 61 KTSQATYAQFKEIFEKYTNEDREILYIAGSATATGTYQSAVMAKNDVDGKIYTYDSNLLC 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
V +A +LA EG + EI+ ++E+KEK + + TLE L KGGRI I
Sbjct: 121 MGTGLLVIKAGELASEGKSVAEILPVLDELKEKAFVIFSVDTLEYLQKGGRISSTKAAIG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAK-TFKKWLDDLSANLQN---KQVAELGIS--YAGS 233
S+LNI+ I++++D + I + RG K K ++ + +N + Q+ +G S +
Sbjct: 181 SILNIKPILEIRDGLVSQISQVRGKKNVISKMMELIKSNCGDDLSDQIVYIGYSDDFKEK 240
Query: 234 PELAQEMKESLQPYVKKPISVLETGSIIQTHTGENAWAVL 273
+L++ M++ L+P K I + G I H G ++
Sbjct: 241 EQLSKVMQDELRP---KEIRFFQIGVCIGAHAGPGVTGII 277
>gi|78042789|ref|YP_361215.1| degV family protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77994904|gb|ABB13803.1| degV family protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 282
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 95/281 (33%), Positives = 149/281 (53%), Gaps = 10/281 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSV-MVDGVVYSDA-DLEEGEFLRLMQSSRNL 58
M K KI TDS++ + E+ E I I+PLSV DG Y D ++ EFL M+ L
Sbjct: 1 MRKFKIFTDSTLDLPEEILNEEGIEIIPLSVHFPDGKSYLDRLEISAKEFLARMKEYVEL 60
Query: 59 PKTSQPPVGVFADVFDRLA---EDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDS 115
PKTSQP F + F E+ +++ + +S LSGT + A+ A + + +TV+DS
Sbjct: 61 PKTSQPSPHHFLEAFKNAVHQLENVGEVVFLGVSSRLSGTFQTAKMAAEMVSKKITVIDS 120
Query: 116 SFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVS 175
+ + A+ KEG + EE++ +IE+ KE+ L+ + T+ENLVKGGRI R+
Sbjct: 121 KTGSLGLGILALKVAEWLKEGINREELLHRIEKFKEEHRLFFTVETMENLVKGGRISRMK 180
Query: 176 GLISSLLNIRVIM-QMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAE--LGISYAG 232
+++ LNI+ I + + ++ + RG K + L +L A K + +GI++AG
Sbjct: 181 EKVANFLNIKPIFHRTPEGEIAHLENVRGRKRAIQRLIEL-AEQHGKDFEQKIVGITHAG 239
Query: 233 SPELAQEMKESLQPYVK-KPISVLETGSIIQTHTGENAWAV 272
+ E A +KE L +K K I + E + TH GE V
Sbjct: 240 ALEEALLLKEKLLERLKPKKIILSELSPALATHGGEGTLLV 280
>gi|21221028|ref|NP_626807.1| hypothetical protein SCO2569 [Streptomyces coelicolor A3(2)]
gi|30179871|sp|Q9RDL7|Y2569_STRCO UPF0230 protein SCO2569
gi|6714675|emb|CAB66247.1| conserved hypothetical protein SCC123.07c [Streptomyces coelicolor
A3(2)]
Length = 281
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 87/279 (31%), Positives = 143/279 (51%), Gaps = 13/279 (4%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPK--- 60
+ IVTDS+ + + IT VPL+V V D LEEG + ++ L K
Sbjct: 5 VAIVTDSTAYLPARAMERHGITAVPLTV-----VLGDRALEEGTEISTRSLAQALQKRRP 59
Query: 61 --TSQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANADVTVVDSSF 117
TS+P +FA+ + R+AE GA I+S+H+S LSGT +AA A A V VVD+
Sbjct: 60 VTTSRPNPELFAETYRRIAESGADGIVSLHLSAELSGTHDAAVVAAREAPVPVRVVDTGM 119
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
I A+ F AA+ A+ G ++E + E+ T Y + TL+ L +GGRIG L
Sbjct: 120 IAMALGFCALAAAETAEAGGTVDEAVTAAEKRAAGTSAYFYVDTLDYLRRGGRIGAAQAL 179
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
S L ++ ++Q++ ++EP+ K R A L++++A+ ++ + + +P+ A
Sbjct: 180 FGSALAVKPLLQLEGGRIEPLEKVRTASKAIARLEEIAADRAGGAPVDIAVHHLAAPDRA 239
Query: 238 QEMKESLQPYVK--KPISVLETGSIIQTHTGENAWAVLI 274
+ + L+ V + V E G++I HTG V++
Sbjct: 240 SALADRLRDRVPGLADLHVSEVGAVIGAHTGPGLLGVVV 278
>gi|154483282|ref|ZP_02025730.1| hypothetical protein EUBVEN_00983 [Eubacterium ventriosum ATCC
27560]
gi|149735792|gb|EDM51678.1| hypothetical protein EUBVEN_00983 [Eubacterium ventriosum ATCC
27560]
Length = 293
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 123/222 (55%), Gaps = 4/222 (1%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDG-VVYSDADLEEGEFLRLMQSSRNLPKT 61
K ++TDS+ I PE K++ I +P+ V+++G V Y ++ + E+ M S +N+ T
Sbjct: 2 KTAVMTDSNSGITPEEGKKIGIYSLPMPVIIEGDVFYEGKNITQEEYYGAMTSGKNV-TT 60
Query: 62 SQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQ 120
SQP G D++D + ++G Q++ I MS ALS + AA Q + + V VVD I
Sbjct: 61 SQPSPGDVMDMWDGILKEGYEQVVYIPMSSALSASCHAAIQLSEEYDGKVQVVDDHRISV 120
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
M+ V EA +A +G EEI K+EE + +YI + TLE L KGGR+ I +
Sbjct: 121 TMRESVLEAKWMANQGMTAEEIKKKLEENAYNSSIYIAVDTLEYLKKGGRVTAAGAAIGA 180
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFK-KWLDDLSANLQNK 221
+LNI+ ++ ++ +L+ K RG K + K L+ + +L +
Sbjct: 181 VLNIKPVLTIQGEKLDAFTKVRGMKKAELKMLEAIEEDLNTR 222
>gi|51891662|ref|YP_074353.1| hypothetical protein STH524 [Symbiobacterium thermophilum IAM
14863]
gi|51855351|dbj|BAD39509.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 285
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 16/285 (5%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M I+I+TDS+ + PE+ + + +VPL V Y D D++ G +++ LP
Sbjct: 1 MPSIRIMTDSTADLSPELLQAHGVRVVPLLVQFGEETYHDGVDMDTGRLFQMVTERNQLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KT+ P G+F F+ DG+Q++ I +S S ++ AR A V V DS +
Sbjct: 61 KTASPGPGLFRSHFEEATADGSQVLYISISAKFSAALQNARIAAADFPGQVHVFDSRNLS 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ QV A L ++G +EEI+A +E + + T+E L KGGR V+ L+
Sbjct: 121 TGIGLQVLHACDLVRQGKSVEEILADLETYQAGVRSSFVVDTMEYLHKGGRCSGVAALVG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQ-----------VAELGI 228
+LL IR ++ + D + K RG + KK LD + V
Sbjct: 181 TLLKIRPVISVVDGGMIVAAKVRGPR--KKALDWMLERFAEDAAQGRVRPERVFVTSPDS 238
Query: 229 SYAGSPELAQEMKESLQPYVKKPISVLETGSIIQTHTGENAWAVL 273
+ +P + E++ L P V++ + V G++I +H G +L
Sbjct: 239 PHEDAPYMVAEIRRIL-PEVQE-VLVTRAGAVIGSHCGPGTIGIL 281
>gi|110801624|ref|YP_697625.1| degV family protein [Clostridium perfringens SM101]
gi|110682125|gb|ABG85495.1| degV family protein [Clostridium perfringens SM101]
Length = 283
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 140/269 (52%), Gaps = 6/269 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
+K++TDS+ I ++A++ + IV LSV+++G Y + D++ F + LP +SQ
Sbjct: 3 VKVITDSTSCIPKDLAEKYGVEIVSLSVIMNGESYKEVDIDSEAFYDELAKCDKLPTSSQ 62
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL-----ANADVTVVDSSFI 118
PP+ F + F++ A+DG I++ +S LSGT + + + + ++DS
Sbjct: 63 PPMDEFYNAFEKFAKDGHDIVAAFISSKLSGTYTTSHIIKDMILEKYPDVKIDLIDSQTS 122
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
A+ V E AK A+EG D +E+ + E++E+ TLENL KGGRIG + L
Sbjct: 123 VMALGIGVLEGAKAAQEGKDFDEVSKIVRNTIEESEIIFVPGTLENLKKGGRIGGAAALF 182
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
+L I I+ +K+ + + K R K K ++ + +L+ K + + + + + + A
Sbjct: 183 GKMLKINPILTVKEGAVVVMDKVRTKKRAIDKIVEVVKQDLKQKGIKQAVVCHILAEDEA 242
Query: 238 QEMKESLQPYVKKPISVLETGSIIQTHTG 266
+++ + L+ + + E ++I H G
Sbjct: 243 KDLAKRLKEELDLDSMIGEISAVIGVHVG 271
>gi|126540403|emb|CAL44590.1| YviA protein [Bacillus megaterium]
Length = 281
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 78/277 (28%), Positives = 139/277 (50%), Gaps = 9/277 (3%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLPKT 61
K I+TDS+ I E+ I +VPLSV+ Y + D+ ++ ++ ++NLP T
Sbjct: 2 KTAIITDSTAYISEEIRSNYHIHMVPLSVIFGEETYREEVDMTADQYFEKIKEAKNLPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQI-ISIHMSHALSGTVEAA-RQGATLANADVTVVDSSFID 119
SQP +G F ++F++L D I I +S +SGT + A G+ + + DV V DS
Sbjct: 62 SQPAIGEFVELFEQLKRDQFDAAIVITLSSGISGTYQGALTAGSMVEDFDVHVFDSEISC 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
F E A++ + +EIIA+ EE+K Y + L +L +GGR+ +I
Sbjct: 122 MVQGFYAIEGAEMVQLNKHPDEIIARFEEMKLSMRAYFMVDDLSHLQRGGRLNAAQAIIG 181
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
SLL ++ ++ + ++ P K R K K+ + L + + + + ++ A+
Sbjct: 182 SLLQVKPVLHFESKKIVPFEKIRTRKRALKRITELLDEDAKENVPMKAVVIHSNRENEAK 241
Query: 239 EMKESLQ---PYVKKPISVLETGSIIQTHTGENAWAV 272
E++ L+ P+++ +S G++I TH GE A +
Sbjct: 242 EIQRDLEQEYPHIEWSLSYF--GAVIGTHLGEGAIGI 276
>gi|152975711|ref|YP_001375228.1| degV family protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152024463|gb|ABS22233.1| degV family protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
Length = 286
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 87/288 (30%), Positives = 141/288 (48%), Gaps = 20/288 (6%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVM-------VDGVVYSDADLEEGEFLRLMQSSR 56
+KI+TDS+ + EV + DI ++PL V +DGV LE + L+ M+
Sbjct: 3 VKIITDSAADLPKEVLQAYDIDVIPLRVFDEAETEYLDGVT-----LESTQLLQKMREGA 57
Query: 57 NLPKTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-----RQGATLANADVT 111
KTS P + F + F A++G I + S LSGT +++ T + D+
Sbjct: 58 AY-KTSLPSLKAFQETFSTYAKEGTPCIYLAFSSELSGTYQSSLLVKEEVQETYPDFDLD 116
Query: 112 VVDSSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRI 171
+VD+ V EAAK+AKEGA EEI+ ++ E + L+ LV+GGR+
Sbjct: 117 IVDTKCASLGQGLVVLEAAKMAKEGASKEEILKRVAFFITHIEHIFTVGDLQYLVRGGRL 176
Query: 172 GRVSGLISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISY 230
+V+G I LLNI+ I+ +++ +L P+ K RG K + +D + +N Q + I +
Sbjct: 177 SKVAGFIGGLLNIKPILNVEEGKLVPLEKIRGKKKMLSRMVDIMEERGKNLQKQTIAIIH 236
Query: 231 AGSPELAQEMKESLQPYVKKPISVLET-GSIIQTHTGENAWAVLIRYE 277
E A+ +K ++ + V+ T G+ I HTG A+ E
Sbjct: 237 GDELETAEVLKTLIKERFGCEVFVVNTIGAAIGAHTGPGVLAIFFLNE 284
>gi|89101038|ref|ZP_01173879.1| degV family protein [Bacillus sp. NRRL B-14911]
gi|89084240|gb|EAR63400.1| degV family protein [Bacillus sp. NRRL B-14911]
Length = 282
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 3/271 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGE-FLRLMQSSRNLP 59
M K+ VTDS+ ++ E+A D+ +VP+++++DG Y + E R +++ + P
Sbjct: 1 MGKVAWVTDSTACLDEELAAHPDVYVVPMTIIMDGQEYIEGRTMSAEDLFRRLKTLSSPP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQP VG F +F+ L E I+++ +S LSGTV +++Q A L N V VDS +
Sbjct: 61 KTSQPSVGSFQALFEELEESYDSIVAVLVSAKLSGTVSSSQQAAQLVNIPVYTVDSGILS 120
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ + E L + G + E +IEE+ +E + + +LE L + GR+ +
Sbjct: 121 YPLTRLIKEGMLLTESGIESSEAARRIEEIGSTSETLVLVGSLEQLHRSGRMSGLQFYFG 180
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDD-LSANLQNKQVAELGISYAGSPELAQ 238
SLL+I+ I+ + L K R + ++ + L + E+ I Y A+
Sbjct: 181 SLLSIKPIIAISGGALSIKEKARSIRKARERMKALLKEAYEQHGFREVFILYGLYDREAK 240
Query: 239 EMKESLQPYVKK-PISVLETGSIIQTHTGEN 268
E L+ ++ S G+ I H GEN
Sbjct: 241 EWMADLRASFQEIEFSAFPLGATIGVHAGEN 271
>gi|18309286|ref|NP_561220.1| DegV-like protein [Clostridium perfringens str. 13]
gi|30179756|sp|Q8XNM9|Y304_CLOPE UPF0230 protein CPE0304
gi|18143962|dbj|BAB80010.1| DegV-like protein [Clostridium perfringens str. 13]
Length = 283
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 139/269 (51%), Gaps = 6/269 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
+K++TDS+ I ++A++ + IV LSV+++G Y + D++ F + LP +SQ
Sbjct: 3 VKVITDSTSCIPKDLAEKYGVEIVSLSVIMNGESYKEVDIDSEAFYDELAKCDKLPTSSQ 62
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL-----ANADVTVVDSSFI 118
PP+ F + F++ A+DG I++ +S LSGT + + + + ++DS
Sbjct: 63 PPMDEFYNAFEKFAKDGHDIVAAFISSKLSGTYTTSHIIKDMILEKYPDVKIDLIDSQTS 122
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
A+ V E AK A+EG D E+ + E++E+ TLENL KGGRIG + L
Sbjct: 123 VMALGIGVLEGAKAAQEGKDFNEVSKIVRNTIEESEIIFVPGTLENLKKGGRIGGAAALF 182
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
+L I I+ +K+ + + K R K K ++ + +L+ K + + + + + + A
Sbjct: 183 GKMLKINPILTVKEGAVVVMDKVRTKKRAIDKIVEVVKQDLKEKGIKQAVVCHILAEDEA 242
Query: 238 QEMKESLQPYVKKPISVLETGSIIQTHTG 266
+++ + L+ + + E ++I H G
Sbjct: 243 KDLAKRLKEELDLDSMIGEISAVIGVHVG 271
>gi|149180963|ref|ZP_01859464.1| hypothetical protein BSG1_11001 [Bacillus sp. SG-1]
gi|148851247|gb|EDL65396.1| hypothetical protein BSG1_11001 [Bacillus sp. SG-1]
Length = 287
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 76/281 (27%), Positives = 142/281 (50%), Gaps = 18/281 (6%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKTS 62
IKI+ DS+ + EV + DI++ PL++ ++G +Y D D++ EF +M++ + P T
Sbjct: 2 IKIMADSTCDLSDEVLQMYDISLAPLTINIEGKIYRDRVDIQPDEFYGMMEALPDFPTTG 61
Query: 63 QPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAA-------RQGATLANADVTVVD 114
P + + + E G +++ I MS SG+ ++A + + +N + VVD
Sbjct: 62 MPSPAEYLKIIKQAVEAGIKEVLCICMSSGTSGSYQSAIIAKDYFFEESPESNVKIHVVD 121
Query: 115 SSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRV 174
S + + + ++A + ++GA EEI+A E+ K K + ++ + L++L+K GR+
Sbjct: 122 SKCMSHGSGWLIMKSAMMREQGASFEEIVAFNEKYKRKIKHFLSVDDLDHLIKSGRLSNT 181
Query: 175 SGLISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELG----ISY 230
S LI +L ++ IM MKD + + K RG K+ L+ + + EL + Y
Sbjct: 182 SALIGKILMLKPIMTMKDGKGAIVGKERG---LKRVLNHYTQEFMKRNDQELTDFIIVGY 238
Query: 231 AGSPELAQEMKESLQPYV--KKPISVLETGSIIQTHTGENA 269
++A+ +K LQ I +++ G + TH G A
Sbjct: 239 TSDIKVAENLKAKLQSDTGFSGDIYIMQMGVSVGTHVGLGA 279
>gi|110798772|ref|YP_694761.1| degV family protein [Clostridium perfringens ATCC 13124]
gi|110673419|gb|ABG82406.1| degV family protein [Clostridium perfringens ATCC 13124]
Length = 283
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 73/269 (27%), Positives = 140/269 (52%), Gaps = 6/269 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
+K++TDS+ I ++A++ + IV LSV+++G Y + D++ F + LP +SQ
Sbjct: 3 VKVITDSTSCIPKDLAEKYGVEIVSLSVIMNGESYKEVDIDSEAFYDELAKCDKLPTSSQ 62
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL-----ANADVTVVDSSFI 118
PP+ F + F++ A+DG I++ +S LSGT + + + + ++DS
Sbjct: 63 PPMDEFYNAFEKFAKDGHDIVAAFISSKLSGTYTTSHIIKDMILEKYPDVKIDLIDSQTS 122
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
A+ V E AK A+EG D +++ + E++E+ TLENL KGGRIG + L
Sbjct: 123 VMALGIGVLEGAKAAQEGKDFDQVSKIVRNTIEESEIIFVPGTLENLKKGGRIGGAAALF 182
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
+L I I+ +K+ + + K R K K ++ + +L+ K + + + + + + A
Sbjct: 183 GKMLKINPILTVKEGAVVVMDKVRTKKRAIDKIVEVVKQDLKEKGIKQAVVCHILAEDEA 242
Query: 238 QEMKESLQPYVKKPISVLETGSIIQTHTG 266
+++ + L+ + + E ++I H G
Sbjct: 243 KDLAKRLKEELDLDSMIGEISAVIGVHVG 271
>gi|57233959|ref|YP_181978.1| degV family protein [Dehalococcoides ethenogenes 195]
gi|57224407|gb|AAW39464.1| degV family protein [Dehalococcoides ethenogenes 195]
Length = 276
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 72/271 (26%), Positives = 144/271 (53%), Gaps = 8/271 (2%)
Query: 9 DSSVTIEPEVAKEL-DITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTSQPPV 66
DS+ I P++AK + ++ I+PL+V + D D+ F + N+P T+QP
Sbjct: 3 DSTSDITPQMAKVMGNVHIMPLTVSFGNEHFQDGIDITPETFYTRLVHDSNVPTTTQPLP 62
Query: 67 GVFADVFDRLAEDGAQIISIHMSHALSGTVEAA---RQGATLANADVTVVDSSFIDQAMK 123
G ++ RL+++ QI+ + +S LSGT ++A ++ + V+D+
Sbjct: 63 GYVMELVSRLSKETDQILILTLSQKLSGTYQSALYTKKTLESPGCRIEVLDTQLTTLGHG 122
Query: 124 FQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLLN 183
+ A+ +AKEGA+L++I+ ++ + + TL+ L +GGRIG+ L+ ++L+
Sbjct: 123 LRAVRASDMAKEGANLDQILEELRKPHNYLAGVMYFDTLKYLARGGRIGKAQSLLGAMLS 182
Query: 184 IRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEMKES 243
+ I+ ++D ++ P+ + R + +L + +A+ +N + LG+ +A +PE+A+ + +
Sbjct: 183 FKPIITVQDGEVSPVTRVRSHQAGMDYLYNYAASRKN--IHYLGVEHANTPEVAESLIDR 240
Query: 244 L-QPYVKKPISVLETGSIIQTHTGENAWAVL 273
L + K+ I G +I T G NA V+
Sbjct: 241 LGNIFPKEKIIRSRIGPVIGTSIGPNAVCVV 271
>gi|81428572|ref|YP_395572.1| Hypothetical protein, DegV family [Lactobacillus sakei subsp. sakei
23K]
gi|78610214|emb|CAI55263.1| Hypothetical protein, DegV family [Lactobacillus sakei subsp. sakei
23K]
Length = 289
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 78/279 (27%), Positives = 144/279 (51%), Gaps = 9/279 (3%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
KI +VTDS+ + + K+ + +VP+ V++DG VY + D+ EF + ++++ P T
Sbjct: 2 KIAVVTDSTAYLTEQQVKDHHLYVVPIPVILDGQVYDEGVDITSEEFYQKLKTAETFPST 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFID 119
SQPP+G +++ L +G +ISIH++ +SG V + A T+ N V DS
Sbjct: 62 SQPPLGEMLKLYEDLGNEGYDAVISIHLASTISGFVTTLKNAASTIDNVQVVPYDSGITV 121
Query: 120 QAMKFQVTEAAKLAKE-GADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
M + EAA++A++ +E+I A++++++ + ++ L+NLV+GGR+ S I
Sbjct: 122 MLMGYLAMEAARMARDPEVTVEQITARLDDLRSTIDECFIVNDLQNLVRGGRLSNASAFI 181
Query: 179 SSLLNIRVIMQMKD--HQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELG--ISYAGSP 234
S+L I+ ++ D +++ K R K + + Q + + L I +A
Sbjct: 182 GSMLKIKPLLTFDDETNKITAFEKVRSLKKAYARAEQIFEETQERVDSPLRALIIHANDE 241
Query: 235 ELAQEMKESL-QPYVKKPISVLETGSIIQTHTGENAWAV 272
A ++ L + + PI + G +I H GE A A+
Sbjct: 242 AAALSWRDKLREKHPDLPIDISYFGPVIGAHLGEKAIAL 280
>gi|154502702|ref|ZP_02039762.1| hypothetical protein RUMGNA_00515 [Ruminococcus gnavus ATCC 29149]
gi|153796585|gb|EDN79005.1| hypothetical protein RUMGNA_00515 [Ruminococcus gnavus ATCC 29149]
Length = 286
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 81/253 (32%), Positives = 131/253 (51%), Gaps = 12/253 (4%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLP 59
M KI IVTDS+ I E+ K + I ++P+ +DG ++ D L + EF + + ++
Sbjct: 1 MKKIAIVTDSNSGITQEMGKTMGIHVIPMPFFIDGELFLEDITLTQEEFYKRLGEDSDI- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
TSQP G + +D L ++ +I+ I MS LS T AA+ + V VVD+ I
Sbjct: 60 STSQPSPGEVMECWDELLKEYDEIVHIPMSSGLSSTCHAAQSLSQEYEGKVCVVDNQRIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
K V +A L G EI +E K + +YI + TL+ L KGGR+ + +
Sbjct: 120 VTQKQSVEDAIVLRDAGKSASEIKEILEAEKLQASIYITVDTLKYLKKGGRVTPAAAALG 179
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFK--------KWLDDLSANLQNKQVAELGISYA 231
++LN++ ++Q++ +L+ K RG K K K L+D A+++ V LG++Y
Sbjct: 180 TVLNLKPVLQIQGEKLDAFSKVRGWKAAKRTMLKAIEKDLNDRFADVREDMV--LGMAYT 237
Query: 232 GSPELAQEMKESL 244
S E AQE K+ +
Sbjct: 238 CSKEEAQEWKQEI 250
>gi|68054134|ref|ZP_00538298.1| DegV [Exiguobacterium sibiricum 255-15]
gi|68009091|gb|EAM88307.1| DegV [Exiguobacterium sibiricum 255-15]
Length = 281
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 7/271 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTS 62
KI +TDS+ + +++ D+T+VPL VM DG ++D E E + +++ TS
Sbjct: 2 KIAWITDSTTILPDSISQHEDLTVVPLLVMKDGESFTDGIDVEAETVYQWIDAKHKVTTS 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAM 122
QP +G F + ++RL E +IH+S LSGT A+ QGA +A + +DS
Sbjct: 62 QPSIGTFTEHYERLKEQYDIGFAIHLSSELSGTYNASVQGAEIAGFRLIAIDSRCGIYPA 121
Query: 123 KFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLL 182
+ EA +LA +G + EI I E + + ++ L+ L GGRI + +LL
Sbjct: 122 GQLLAEAMQLAADGMAVTEIEQYILERRFDHHIEFTVANLDQLQAGGRISSTKAFVGNLL 181
Query: 183 NIRVIMQMKDHQLEPIVKGRGAKTFKKW----LDDLSANLQNKQVAELGISYAGSPELAQ 238
+R + ++ ++ P + +TFKK D L L++ V ++ + +A + +LA
Sbjct: 182 QLRPLFHFEEGKIVPY---QTVRTFKKAHGKIYDHLVEMLESGTVTDVSLFHATAYDLAF 238
Query: 239 EMKESLQPYVKKPISVLETGSIIQTHTGENA 269
E K +L+ + + ++ +HTG A
Sbjct: 239 EWKTNLEKRFDVTVRIDNLTPVLGSHTGNPA 269
>gi|154484842|ref|ZP_02027290.1| hypothetical protein EUBVEN_02560 [Eubacterium ventriosum ATCC
27560]
gi|149733795|gb|EDM49914.1| hypothetical protein EUBVEN_02560 [Eubacterium ventriosum ATCC
27560]
Length = 290
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 10/219 (4%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KI I+TDS I E A+ L I ++P+ + VY + DL EF +++ ++
Sbjct: 1 MKKIGIMTDSHSGILSEEAQRLGIKVLPMPFYIGEKVYREGVDLSRDEFYDMLRKGVDV- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-----VTVVD 114
TSQP D++ + ++ +I+ I +S ALSG+ A +AN D V VVD
Sbjct: 60 STSQPSPTEVMDMWKEMLKEYEEIVYIPLSSALSGSCMTAE---AMANEDEFAGKVFVVD 116
Query: 115 SSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRV 174
+ + M V +A ++A+EG + EI +EE +EK +YIGLSTL+ L KGGR+ V
Sbjct: 117 NGRVATPMHRSVLDAVEMAEEGYSVVEIKKILEETREKMTIYIGLSTLKYLKKGGRVSSV 176
Query: 175 SGLISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDD 213
+ L + +LNI+ +M +L+ K RG K +K + D
Sbjct: 177 TALAADVLNIKPVMHFSTGKLDIYQKCRGMKKSRKVMID 215
>gi|153811661|ref|ZP_01964329.1| hypothetical protein RUMOBE_02053 [Ruminococcus obeum ATCC 29174]
gi|149832402|gb|EDM87487.1| hypothetical protein RUMOBE_02053 [Ruminococcus obeum ATCC 29174]
Length = 291
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 75/219 (34%), Positives = 119/219 (54%), Gaps = 10/219 (4%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M K I+TDS I E A+ L I ++P+ ++ VY + DL EF +++ ++
Sbjct: 1 MKKTGIMTDSHSGILNEEAERLGIKVLPMPFYIEEKVYREGVDLSREEFYDMLRKGTDV- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-----VTVVD 114
TSQP + A+++ + ++ +I+ I +S ALSG+ AA +AN D V VVD
Sbjct: 60 STSQPSLVEVAEMWKEMLKEYEEIVYIPLSSALSGSCMAA---MAMANEDEFAGKVFVVD 116
Query: 115 SSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRV 174
+ + M V +A ++ ++G EI +EE +EK +YIGLSTLE L KGGR+ V
Sbjct: 117 NGRVATPMHRSVLDAVEMTEKGYSAAEIKKILEETREKMTIYIGLSTLEYLKKGGRVSSV 176
Query: 175 SGLISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDD 213
+ L + +LNI+ +M L+ K RG K +K + D
Sbjct: 177 TALAADVLNIKPVMHFSTGTLDTYQKCRGMKKARKVMID 215
>gi|52082082|ref|YP_080873.1| DegV [Bacillus licheniformis ATCC 14580]
gi|52787472|ref|YP_093301.1| YviA [Bacillus licheniformis ATCC 14580]
gi|18266389|gb|AAL67545.1|AF459920_1 hypothetical protein YviA [Bacillus licheniformis]
gi|52005293|gb|AAU25235.1| DegV [Bacillus licheniformis ATCC 14580]
gi|52349974|gb|AAU42608.1| YviA [Bacillus licheniformis DSM 13]
gi|56310548|emb|CAE82206.1| hypothetical protein [Bacillus licheniformis]
Length = 280
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 4/274 (1%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLPKT 61
K +VTDS+ I ++ +I ++PL+V+ Y + D+ ++ + +++ NLP T
Sbjct: 2 KTAVVTDSTAYIPKDLRDRYNIHMIPLNVIFGETSYREEIDMSWKDYYKEVKAHENLPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFIDQ 120
SQP G ++++L E +ISIH+S +SGT +A + L V DS
Sbjct: 62 SQPAYGELISLYEKLGETYDAVISIHLSSGISGTFNSAVSASGMLEGIKVYPFDSEISCM 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
A F EAA++A++GA EEII ++ +K Y + L +L +GGR+ + S
Sbjct: 122 AQGFYAIEAAEMAEKGAAPEEIIRHLDHMKTSMRAYFMVDDLSHLQRGGRLSGAQAFVGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
LL ++ I+ ++ + P K R K + + + + + + +A E A +
Sbjct: 182 LLKVKPILHFENKLIVPYEKIRTRKKAMNRLFELFGEDAEKGKPLRAVVIHANREEEADQ 241
Query: 240 MKESL-QPYVKKPISVLETGSIIQTHTGENAWAV 272
+ E L + Y G +I TH GE A +
Sbjct: 242 IIEELSKQYAHVEFYKSYFGPVIGTHLGEGAMGI 275
>gi|147669557|ref|YP_001214375.1| degV family protein [Dehalococcoides sp. BAV1]
gi|146270505|gb|ABQ17497.1| degV family protein [Dehalococcoides sp. BAV1]
Length = 285
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 138/270 (51%), Gaps = 7/270 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
+ IVTD++ I E+ ++ I ++P+ +++ G Y DA+L+ +F R+++ S KT
Sbjct: 5 VAIVTDTTACIPAELVRKYQIEVIPIQIVIGGKAYPDAELDLSQFYRILKESPLTLKTVG 64
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGA-----TLANADVTVVDSSFI 118
G + + F RLA QI+ I SG AA+ A +N + V+
Sbjct: 65 SLPGPYIEAFTRLAAKTDQILCITEPVRFSGMFNAAQLAAMQVLEKYSNLRIKVIPCETA 124
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ V EAA+ A+ G L+ ++ + + ++ LY L T + L++GGRI +++ L
Sbjct: 125 AAGLGLVVLEAARQAEAGKSLDNLVGIVSTLMQRVYLYAALDTFDYLIRGGRIPKIAALA 184
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGA-KTFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
S+L I+ + +++ + + R A K + LD + +++ K ++ + +A + E A
Sbjct: 185 DSVLQIKPVFTLRNGDAQTVALPRTAEKALQNMLDLMMGHVKGKGKLKVAVMHADALERA 244
Query: 238 QEMKESL-QPYVKKPISVLETGSIIQTHTG 266
+++++ + + + I ++E ++ HTG
Sbjct: 245 HRLEQNIKEKFPEAEILIMEFTPVMGVHTG 274
>gi|120602273|ref|YP_966673.1| degV family protein [Desulfovibrio vulgaris subsp. vulgaris DP4]
gi|120562502|gb|ABM28246.1| degV family protein [Desulfovibrio vulgaris subsp. vulgaris DP4]
Length = 637
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 74/275 (26%), Positives = 142/275 (51%), Gaps = 7/275 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKTS 62
+ IVTDS+ + ++ E I VPL + +D Y+D D+ EF R + +SR+ +TS
Sbjct: 326 VGIVTDSTCDLPRDLLDEYGIATVPLRLFLDDEEYADKVDITAEEFNRRLPTSRS-ARTS 384
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAM 122
QP FA + I+S+H+ SGT ++A + V V+D+ + +
Sbjct: 385 QPAPADFATAYRGQLARHRDIVSLHVMAMYSGTCQSATAVGRTFDGHVHVLDTRTLSCGL 444
Query: 123 KFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLL 182
V EAA+ A+EG +EI+ ++ + +++ + TL+ V+GGR+ R +G+++ LL
Sbjct: 445 GLVVLEAARRAREGMAADEILRLAQQDADNLRVFVSMDTLDFAVRGGRMSRGTGMVAKLL 504
Query: 183 NIRVIMQM---KDHQLEPIVKGRGA-KTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
NI+ +++ + +++ + K G ++ + LD L + + I++ G+P+ A
Sbjct: 505 NIKPVVEFAVRNEGKVDVVAKAIGVRRSEARLLDLLHRDAEGMTNLRFAIAHVGAPQTAL 564
Query: 239 EMKESLQ-PYVKKPISVLETGSIIQTHTGENAWAV 272
E L+ + P ++ +++ TH+G A AV
Sbjct: 565 RYAEVLKTTFGVAPDYIMPASAVLGTHSGPGACAV 599
>gi|118444302|ref|YP_876999.1| degV family protein [Clostridium novyi NT]
gi|118134758|gb|ABK61802.1| degV family protein [Clostridium novyi NT]
Length = 285
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 88/281 (31%), Positives = 139/281 (49%), Gaps = 15/281 (5%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
I+IVTDS + ++ ++ +I +PL V V+ Y D +E E M+ N+ KT+
Sbjct: 3 IRIVTDSGSDLPKDIIEKYNIKFLPLYVYVNDEPYLDGVTIEHKEVYDGMRKG-NMYKTA 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGAT-----LANADVTVVDSSF 117
Q P VF D F AE+ I I S LSGT +++ + D+ V+D+
Sbjct: 62 QIPPNVFYDAFKECAENNDTCIYIGFSSELSGTYQSSMIAKEDILEEYPDFDIHVIDTKS 121
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
+ V +AA++ EG EE++ IE + E + LE L KGGR+ R S +
Sbjct: 122 ASLGLGLVVYKAAQMVMEGKTKEEVLEAIEFNSKHMEGIFTVDDLEYLYKGGRVSRGSAV 181
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLD---DLSANLQNKQVAELGISYAGS 233
I LLNI+ I+ ++ +L PI K RG K KK L+ + +L+N+ +A IS+
Sbjct: 182 IGGLLNIKPILNIEKGKLIPIDKVRGRKKVLKKILELVRERGVDLENQTIA---ISHGDD 238
Query: 234 PELAQEMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVL 273
E A+++KE + + K + G +I +H G AV
Sbjct: 239 IEAAEKVKEIFKEEFGSKDFLISTIGGVIGSHVGPGTVAVF 279
>gi|73748795|ref|YP_308034.1| degV family protein [Dehalococcoides sp. CBDB1]
gi|73660511|emb|CAI83118.1| degV family protein [Dehalococcoides sp. CBDB1]
Length = 285
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 66/270 (24%), Positives = 138/270 (51%), Gaps = 7/270 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
+ IVTD++ I E+ ++ I ++P+ +++ G Y DA+L+ +F R+++ S KT
Sbjct: 5 VAIVTDTTACIPAELVRKYQIEVIPIQIVIGGKAYPDAELDLSQFYRILKESPLTLKTVG 64
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGA-----TLANADVTVVDSSFI 118
G + + F RLA QI+ I SG AA+ A +N + V+
Sbjct: 65 SLPGPYIEAFTRLAAKTDQILCITEPVRFSGMFNAAQLAAMQVLEQYSNLRIKVIPCETA 124
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ V EAA+ A+ G L+ ++ + + ++ LY L T + L++GGRI +++ L
Sbjct: 125 AAGLGLVVLEAARQAEAGKSLDNLVGIVSTLMQRVYLYAALDTFDYLIRGGRIPKIAALA 184
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGA-KTFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
++L I+ + +++ + + R A K + LD + +++ K ++ + +A + E A
Sbjct: 185 DAVLQIKPVFTLRNGDAQTVALPRTAEKALQNMLDLMMGHVKGKGKLKVAVMHADALEWA 244
Query: 238 QEMKESL-QPYVKKPISVLETGSIIQTHTG 266
+++++ + + + I ++E ++ HTG
Sbjct: 245 HRLEQNIKEKFPEAEILIMEFTPVMGVHTG 274
>gi|886711|emb|CAA88270.1| unknown [Staphylococcus epidermidis]
Length = 159
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 54/158 (34%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLP 59
M K IVTDS+ + E K+ +I ++PLS+ +DG Y+D D+ E++ +++ ++
Sbjct: 1 MAKQIIVTDSTSDLSHEYLKQHNIHVIPLSLTIDGKSYTDQVDISSSEYIDHIENDADV- 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFID 119
KTSQPP+G F + +++LA+D +IISIH+S LSGT A Q + + + ++TV+DS I
Sbjct: 60 KTSQPPIGRFIETYEQLAQDDVEIISIHLSSGLSGTYNTAVQASHMVDGNITVIDSKSIS 119
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYI 157
+ +Q+ + +L +G EEI+ ++ ++++ +L++
Sbjct: 120 FGLGYQIKQIVELISQGTSTEEIVKEMTQLRDNLQLFV 157
>gi|46580351|ref|YP_011159.1| DAK2 domain/degV family protein [Desulfovibrio vulgaris subsp.
vulgaris str. Hildenborough]
gi|46449768|gb|AAS96418.1| DAK2 domain/degV family protein [Desulfovibrio vulgaris subsp.
vulgaris str. Hildenborough]
Length = 637
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 73/275 (26%), Positives = 142/275 (51%), Gaps = 7/275 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKTS 62
+ IVTDS+ + ++ E I VPL + +D Y+D D+ EF R + +SR+ +TS
Sbjct: 326 VGIVTDSTCDLPRDLLDEYGIATVPLRLFLDDEEYADKVDITAEEFNRRLPTSRS-ARTS 384
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAM 122
QP FA + I+S+H+ SGT ++A + V V+D+ + +
Sbjct: 385 QPAPADFATAYRGQLARHRDIVSLHVMAMYSGTCQSATAVGRTFDGHVHVLDTRTLSCGL 444
Query: 123 KFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLL 182
V EAA+ A+EG +EI+ ++ + +++ + TL+ V+GGR+ R +G+++ LL
Sbjct: 445 GLVVLEAARRAREGMAADEILRLAQQDADNLRVFVSMDTLDFAVRGGRMSRGTGMVAKLL 504
Query: 183 NIRVIMQM---KDHQLEPIVKGRGA-KTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
NI+ +++ + +++ + K G ++ + +D L + + I++ G+P+ A
Sbjct: 505 NIKPVVEFAVRNEGKVDVVAKAIGVRRSEARLIDLLRRDAEGMTNLRFAIAHVGAPQTAL 564
Query: 239 EMKESLQ-PYVKKPISVLETGSIIQTHTGENAWAV 272
E L+ + P ++ +++ TH+G A AV
Sbjct: 565 RYAEVLKTTFGVAPDYIMPASAVLGTHSGPGACAV 599
>gi|154482572|ref|ZP_02025020.1| hypothetical protein EUBVEN_00239 [Eubacterium ventriosum ATCC
27560]
gi|149736597|gb|EDM52483.1| hypothetical protein EUBVEN_00239 [Eubacterium ventriosum ATCC
27560]
Length = 280
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
IK + DS + AKE I VPLS+ D Y D ++ EF + M+ PKT+
Sbjct: 2 IKFMVDSGSDYDVNEAKEKGIAFVPLSITFDNDTYKDGIEISRSEFYKRMREEDIFPKTA 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-VTVVDSSFIDQA 121
QP F DVF+ +G QII + +S +SGT ++A +A D + ++DS A
Sbjct: 62 QPSPQAFLDVFEEAKANGDQIIGVMLSGGISGTYQSANIAKDMAEYDGIHLIDSKTAVYA 121
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
+K V +L EG ++EI+ +EE+K + + + + LENL KGGR+ ++ +
Sbjct: 122 IKIMVDYGMQLRDEGKTVDEIVEALEELKSRISINLAIDNLENLYKGGRLTKMQAGFGNF 181
Query: 182 LNIRVIMQMKDHQLEPIVKGR 202
++ ++ + + L IVKG+
Sbjct: 182 AKLKPVISIPEGTL--IVKGK 200
>gi|116493511|ref|YP_805246.1| hypothetical protein PEPE_1783 [Pediococcus pentosaceus ATCC 25745]
gi|116103661|gb|ABJ68804.1| hypothetical protein PEPE_1783 [Pediococcus pentosaceus ATCC 25745]
Length = 287
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 68/248 (27%), Positives = 127/248 (51%), Gaps = 5/248 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
KI ++ DS + E+A ++P+ V Y D ++E EF + + + LP T
Sbjct: 5 KIAVLVDSCSDVPAEIANREYFEMIPMGVFFGEEEYQDRVNIEPDEFYQKLAKANPLPTT 64
Query: 62 SQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFID 119
+ P + D L++ G QII++ +S LSGT + + A + V+D+ I
Sbjct: 65 ASPKGELITKALDNLSKRGFTQIIAVCISSGLSGTAQQVKIYAKNYPQLQIEVIDTKNIG 124
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A F A+++ +EG + ++I+ +++ V +T+++ + TL+ L+ GGRIGRV+GL+
Sbjct: 125 IASGFAAVRASEVIEEGWEFDQIVEEVQRVANQTKVFFYVPTLKYLIAGGRIGRVAGLVG 184
Query: 180 SLLNIRVIMQMKDHQL-EPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
S++N++ I+ D + P+ K G K KK L + L+N Q L + + + L
Sbjct: 185 SIINLKPIISCDDEGIYYPVAKAHGEKKALKKMLQLVDDTLENAQKFNLAVVHGLNEGLM 244
Query: 238 QEMKESLQ 245
++ +
Sbjct: 245 NQISTEFK 252
>gi|52142640|ref|YP_084190.1| DegV family protein [Bacillus cereus E33L]
gi|51976109|gb|AAU17659.1| DegV family protein [Bacillus cereus E33L]
Length = 286
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 81/277 (29%), Positives = 146/277 (52%), Gaps = 20/277 (7%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLE--EG---EFLRLMQSSRN- 57
+KI+TDS+ + E+ + DI ++PL V Y +A+ E +G E + L+Q+ R
Sbjct: 3 VKIITDSAADLPVELLQAYDIDLIPLRV------YDEAETEYLDGVTLESVTLLQNMREG 56
Query: 58 -LPKTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-----RQGATLANADVT 111
+ +TS P + F + F A++G I + S LSGT +++ T AN D+
Sbjct: 57 AVYRTSLPSLETFQEKFVSYAKEGNPCIYLAFSSELSGTYQSSVLIKEEVKETYANLDLE 116
Query: 112 VVDSSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRI 171
++D+ V EAAK+AK+GA E+I+ +++ + E ++ L+ LV+GGR+
Sbjct: 117 IIDTKCASLGQGLVVLEAAKMAKDGASKEDILKRVDFLMNHMEHIFTVADLQYLVRGGRL 176
Query: 172 GRVSGLISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISY 230
+V+G I LLNI+ I+ +++ +L P+ K RG K + +D + + + +GI++
Sbjct: 177 SKVAGFIGGLLNIKPILNVEEGKLVPLEKVRGKKKVLGRIVDIMEDRGKELKGQTIGITH 236
Query: 231 AGSPELAQEMKESLQPYVKKPISVLET-GSIIQTHTG 266
E A+ +K + + ++ T G+ I HTG
Sbjct: 237 GDDLETAEALKALITERFGCEVFIVNTIGAAIGAHTG 273
>gi|116629651|ref|YP_814823.1| hypothetical protein LGAS_1009 [Lactobacillus gasseri ATCC 33323]
gi|116095233|gb|ABJ60385.1| hypothetical protein LGAS_1009 [Lactobacillus gasseri ATCC 33323]
Length = 295
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 142/280 (50%), Gaps = 10/280 (3%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
KI ++TDS+ I PE AK DIT+VP+ V++ Y D D+ + L + PKT
Sbjct: 2 KIALITDSTSDISPEEAKANDITVVPIPVIIGDKQYMDGIDITAEKLFELERDGAPFPKT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFID 119
SQP G ++ +L ++G + II+I ++ +SG + A T ++ D +
Sbjct: 62 SQPSPGTMLELCQKLKDEGYEAIIAIPLTSGISGFYNSLVNLAHTHPEFNLYPYDPAMTV 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
++M V AAK+ K G + +EI+AK++E+++ ++ + L NLV+GGR+ S I
Sbjct: 122 RSMGNLVLAAAKMIKNGWEPKEILAKLDEIRDTIDVLFVVDDLNNLVRGGRLSNASAFIG 181
Query: 180 SLLNIRVIMQMK--DHQLEPIVKGRGAKTFKKWLDDLSANLQN----KQVAELGISYAGS 233
++L I+ ++ K D+Q+ K R K K ++++ N K L + +
Sbjct: 182 TMLQIKPLLTFKKDDYQIVSFDKVRSMKRAVKKAENITIERINNSPIKDNIALTVYNSNY 241
Query: 234 PELAQEMKESLQ-PYVKKPISVLETGSIIQTHTGENAWAV 272
E A ++K+ Q + I + S+I T+ GE + +
Sbjct: 242 LEQATKVKDDFQAAFPNMTIKMFNFSSVIATYLGEKSLGI 281
>gi|30020988|ref|NP_832619.1| DegV family protein [Bacillus cereus ATCC 14579]
gi|29896541|gb|AAP09820.1| DegV family protein [Bacillus cereus ATCC 14579]
Length = 286
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 80/277 (28%), Positives = 146/277 (52%), Gaps = 20/277 (7%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLE--EG---EFLRLMQSSRN- 57
+KI+TDS+ + E+ + DI ++PL V Y +A+ E +G E + L+Q R
Sbjct: 3 VKIITDSAADLPVELLQAYDIDLIPLRV------YDEAETEYLDGVTLESVTLLQKMREG 56
Query: 58 -LPKTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-----RQGATLANADVT 111
+ +TS P + F + F A++G I + S LSGT +++ T AN D+
Sbjct: 57 AVYRTSLPSLETFQEKFVSYAKEGNPCIYLAFSSELSGTYQSSVVIKEEVKETYANLDLE 116
Query: 112 VVDSSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRI 171
++D+ V EAAK+AK+GA E+I+ +++ + E ++ L+ LV+GGR+
Sbjct: 117 IIDTKCASLGQGLVVLEAAKMAKDGASKEDILKRVDFLMSHMEHIFTVADLQYLVRGGRL 176
Query: 172 GRVSGLISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISY 230
+V+G I LLNI+ I+ +++ +L P+ K RG K + +D + ++ + +G+++
Sbjct: 177 SKVAGFIGGLLNIKPILNVEEGKLVPLEKVRGKKKVLSRIVDIMEERGKDLKGQTIGMTH 236
Query: 231 AGSPELAQEMKESLQPYVKKPISVLET-GSIIQTHTG 266
E A+ +K + + ++ T G+ I HTG
Sbjct: 237 GDDLETAEALKSLITERFGCEVFIVNTIGAAIGAHTG 273
>gi|139439034|ref|ZP_01772486.1| Hypothetical protein COLAER_01492 [Collinsella aerofaciens ATCC
25986]
gi|133775381|gb|EBA39201.1| Hypothetical protein COLAER_01492 [Collinsella aerofaciens ATCC
25986]
Length = 286
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 87/274 (31%), Positives = 132/274 (48%), Gaps = 9/274 (3%)
Query: 6 IVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKTSQP 64
I+TDS+ I P A+EL I ++PL V+++G D + E++ M S LP TSQP
Sbjct: 5 IITDSTSDISPARAQELGIYVIPLHVIIEGEDLLDQVQITAEEYVARMAGSEQLPHTSQP 64
Query: 65 PVGVFADVFDRLAEDGA-QIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAMK 123
G F +FDR+ DG I I + S A A DV +DS A
Sbjct: 65 SAGEFKALFDRVRADGHDSAIFISLCSEWSACYSNACLVAETHELDVRCIDSRTGSGAEG 124
Query: 124 FQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLLN 183
V A + ++G L+E A+I L + TLENLVK GR +++G ++ +LN
Sbjct: 125 LLVEYALAMREDGRSLDETEAQIRATLPDAHLLLIPRTLENLVKNGRAPKLAGQLTQMLN 184
Query: 184 IRVIM--QMKDHQLEPIVKGRGAKTF-KKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
IR+ + + + +++ I KGRGAK + D A L + + + G+ E + +
Sbjct: 185 IRLTVSPEWQSGEIKAIKKGRGAKRIVANTMADCLAFLDEHPGSSVRVLTTGAAEEQELV 244
Query: 241 KESL--QPYVKKPISVLETGSIIQTHTGENAWAV 272
E+L Q YV + G I TH G +A A+
Sbjct: 245 NEALAGQDYVDAGTGPI--GCTIATHVGVDAIAI 276
>gi|113941827|ref|ZP_01427606.1| degV family protein [Herpetosiphon aurantiacus ATCC 23779]
gi|113896538|gb|EAU15621.1| degV family protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 282
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 147/280 (52%), Gaps = 9/280 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMV-DGVVYSDADLEEGEFLRLMQSSRNLP 59
M ++KI+TDS+ I P +A+EL+IT++P+ V D + + D+ +F R M P
Sbjct: 1 MARVKIITDSTADIPPALAQELNITVIPIYVHFGDQTLRAGIDISNEQFYRRMAEGGPYP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA---RQGATLANADVTVVDSS 116
T+ P GVF + + + + + SIH+S+ G V++A R + V V+DS+
Sbjct: 61 YTTAPAPGVFEQYYRQFSREYDGVFSIHLSNRFGGVVKSATIARDKLPASLTRVEVIDST 120
Query: 117 FIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSG 176
+ AA+ A +GA ++E+ + + + T + + +++ L + GR+ + S
Sbjct: 121 STSLGLGMVAIAAARAALDGASIDEVHRVVMQTIQLTHVVFFVDSIDYLERSGRLSQASA 180
Query: 177 LISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN-KQVAELGISYAGSPE 235
++ S+ I+ ++ + D ++ P + R T K ++ L +++ +V ++ I ++ +P+
Sbjct: 181 MLGSMQRIKPLLILDDGEIVPYDRTR---TRAKAIEGLFTFIEDFPKVEQVAIMHSTTPD 237
Query: 236 LAQEMKESLQP-YVKKPISVLETGSIIQTHTGENAWAVLI 274
+++ E + P Y + + ++E G + H G NA V++
Sbjct: 238 DVEKLLEKIDPIYPRDQVMIVEYGPALGAHLGPNAMGVVV 277
>gi|30262836|ref|NP_845213.1| degV family protein [Bacillus anthracis str. Ames]
gi|47528167|ref|YP_019516.1| degv family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49185685|ref|YP_028937.1| degV family protein [Bacillus anthracis str. Sterne]
gi|49481635|ref|YP_036953.1| DegV family protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|65320162|ref|ZP_00393121.1| COG1307: Uncharacterized protein conserved in bacteria [Bacillus
anthracis str. A2012]
gi|30257469|gb|AAP26699.1| degV family protein [Bacillus anthracis str. Ames]
gi|47503315|gb|AAT31991.1| degV family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49179612|gb|AAT54988.1| degV family protein [Bacillus anthracis str. Sterne]
gi|49333191|gb|AAT63837.1| DegV family protein [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 286
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 80/277 (28%), Positives = 145/277 (52%), Gaps = 20/277 (7%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLE--EG---EFLRLMQSSRN- 57
+KI+TDS+ + E+ + DI ++PL V Y +A+ E +G E + L+Q R
Sbjct: 3 VKIITDSAADLPVELLQAYDIDLIPLRV------YDEAETEYLDGVTLESVTLLQKMREG 56
Query: 58 -LPKTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-----RQGATLANADVT 111
+ +TS P + F + F A++G I + S LSGT +++ T AN D+
Sbjct: 57 AVYRTSLPSLETFQEKFVSYAKEGNPCIYLAFSSELSGTYQSSVLIKEEVKETYANLDLE 116
Query: 112 VVDSSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRI 171
++D+ V EAAK+AK+GA E+I+ +++ + E ++ L+ LV+GGR+
Sbjct: 117 IIDTKCASLGQGLVVLEAAKMAKDGASKEDILKRVDFLMNHMEHIFTVADLQYLVRGGRL 176
Query: 172 GRVSGLISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISY 230
+V+G I LLNI+ I+ +++ +L P+ K RG K + +D + + + +G+++
Sbjct: 177 SKVAGFIGGLLNIKPILNVEEGKLVPLEKVRGKKKVLSRIVDIMEERGKELKGQTIGMTH 236
Query: 231 AGSPELAQEMKESLQPYVKKPISVLET-GSIIQTHTG 266
E A+ +K + + ++ T G+ I HTG
Sbjct: 237 GDDLETAEALKALITERFGCEVFIVNTIGAAIGAHTG 273
>gi|154687663|ref|YP_001422824.1| YviA [Bacillus amyloliquefaciens FZB42]
gi|126363002|emb|CAM35819.1| hypothetical protein YviA [Bacillus amyloliquefaciens FZB42]
gi|154353514|gb|ABS75593.1| YviA [Bacillus amyloliquefaciens FZB42]
Length = 282
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 81/277 (29%), Positives = 136/277 (49%), Gaps = 9/277 (3%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMV-DGVVYSDADLEEGEFLRLMQSSRNLPKT 61
KI +VTDS+ I E+ +E I ++PL V+ + + +L+ F + +++ LP T
Sbjct: 2 KIAVVTDSTAYIPKEMREEHHIHMIPLQVVFGEKTFREETELDWRSFYKEVKNHDELPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLAN-ADVTVVDSSFIDQ 120
SQP G +++ L + +ISIH+S +SGT +A T+ + V DS
Sbjct: 62 SQPSFGELIALYEELGKTYDAVISIHLSSGISGTYNSAASANTMVDHIKVYPFDSEISCL 121
Query: 121 AMKFQVTEAAKLAKEGADL-EEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
A F +AA+L K+G D EEII ++EE+K+ Y + L +L +GGR+ I
Sbjct: 122 AQGFYALKAAQLIKDGVDSPEEIIKELEEMKKTVRAYFMVDDLSHLQRGGRLSSAQAFIG 181
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVA-ELGISYAGSPELAQ 238
LL ++ I+ + + P K R K + +L +K + + +A E A
Sbjct: 182 GLLKVKPILHFDNKVIVPFEKIRTRKKAISRIFELFGEDASKGIPMRAAVIHANREEEAA 241
Query: 239 EMKESLQ---PYVKKPISVLETGSIIQTHTGENAWAV 272
++ + L P+V+ S G++I TH GE A +
Sbjct: 242 DIIQELSGKYPHVEFYNSYF--GAVIGTHLGEGAIGI 276
>gi|89207303|ref|ZP_01185847.1| DegV [Bacillus weihenstephanensis KBAB4]
gi|89154763|gb|EAR74788.1| DegV [Bacillus weihenstephanensis KBAB4]
Length = 286
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 83/288 (28%), Positives = 147/288 (51%), Gaps = 20/288 (6%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLE--EGEFLR---LMQSSRN- 57
+KI+TDS+ + E+ + DI ++PL V Y +A+ E +G L+ L+Q R
Sbjct: 3 VKIITDSAADLPVELLQAYDIDLIPLRV------YDEAETEYLDGVTLKSVTLLQKMREG 56
Query: 58 -LPKTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-----RQGATLANADVT 111
+ KTS P + F + F A++G I + S LSGT +++ T + D+
Sbjct: 57 AVYKTSLPSLETFQEKFVSYAKEGNPCIYLAFSSELSGTYQSSVLIKEEVKETYTDLDLE 116
Query: 112 VVDSSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRI 171
++D+ V EAAK+AKEGA +EI+ ++ + E E ++ L+ LV+GGR+
Sbjct: 117 IIDTKCASLGQGIVVLEAAKMAKEGASKKEILNRVAFLMEHMEHIFTVADLQYLVRGGRL 176
Query: 172 GRVSGLISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISY 230
+V+G I LLNI+ I+ + + +L P+ K RG K + +D + ++ + +G+++
Sbjct: 177 SKVAGFIGGLLNIKPILNVDEGKLVPLEKVRGKKKVLSRIVDIMEERGKDLKGQTIGMTH 236
Query: 231 AGSPELAQEMKESLQPYVKKPISVLET-GSIIQTHTGENAWAVLIRYE 277
E A+ +K + + ++ T G+ I HTG A + E
Sbjct: 237 GDDLETAEALKALITERFGCEVFIVNTIGAAIGAHTGPGALTLFFLNE 284
>gi|47567694|ref|ZP_00238404.1| DegV family protein [Bacillus cereus G9241]
gi|47555671|gb|EAL14012.1| DegV family protein [Bacillus cereus G9241]
Length = 286
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 81/277 (29%), Positives = 144/277 (51%), Gaps = 20/277 (7%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLE--EG---EFLRLMQSSRN- 57
+KI+TDS+ + E+ + DI ++PL V Y +A+ E +G E + L+Q R
Sbjct: 3 VKIITDSAADLPVELLQAYDIDLIPLRV------YDEAETEYLDGVTLESVTLLQKMREG 56
Query: 58 -LPKTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-----RQGATLANADVT 111
+ +TS P + F + F A++G I + S LSGT +++ T AN D+
Sbjct: 57 AVYRTSLPSLETFQEKFVSYAKEGNPCIYLAFSSELSGTYQSSVLIKEEVKETYANLDLE 116
Query: 112 VVDSSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRI 171
++D+ V EAAK+AK+GA E+I+ +++ + E ++ L+ LV+GGR+
Sbjct: 117 IIDTKCASLGQGLVVLEAAKMAKDGASKEDILKRVDFLMNHMEHIFTVADLQYLVRGGRL 176
Query: 172 GRVSGLISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISY 230
+V+G I LLNI+ I+ +++ +L P+ K RG K + +D + + + +GI++
Sbjct: 177 SKVAGFIGGLLNIKPILNVEEGKLVPLEKVRGKKKVLGRIVDIMEERGKELKGQTIGITH 236
Query: 231 AGSPELAQEMKESLQPYVKKPISVLET-GSIIQTHTG 266
E A+ +K + ++ T G+ I HTG
Sbjct: 237 GDDLETAEALKALITERFGCEAFIVNTIGAAIGAHTG 273
>gi|16080601|ref|NP_391428.1| hypothetical protein BSU35480 [Bacillus subtilis subsp. subtilis
str. 168]
gi|729311|sp|P32436|DEGV_BACSU Protein degV
gi|39848|emb|CAA79225.1| U3 [Bacillus subtilis]
gi|1762331|gb|AAC44939.1| degV gene product
gi|2636074|emb|CAB15565.1| yviA [Bacillus subtilis subsp. subtilis str. 168]
Length = 281
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 9/276 (3%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLPKTS 62
I +VTDS+ I E+ ++ I ++PL V+ Y + +L+ F ++ LP TS
Sbjct: 3 IAVVTDSTAYIPKEMREQHQIHMIPLQVVFREETYREEIELDWKSFYEEVKKHNELPTTS 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLA-NADVTVVDSSFIDQA 121
QPP+G +++ L + +ISIH+S +SGT +A ++ N DV DS A
Sbjct: 63 QPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLA 122
Query: 122 MKFQVTEAAKLAKEGADL-EEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F +AA+L K GA E+II ++EE+K+ Y + L +L +GGR+ I S
Sbjct: 123 QGFYALKAAELIKNGASSPEDIIKELEEMKKTVRAYFMVDDLAHLQRGGRLSSAQAFIGS 182
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKT----FKKWLDDLSANLQNKQVAELGISYAGSPEL 236
LL ++ I+ + + P K R K + LD+ ++ + A + +
Sbjct: 183 LLKVKPILHFDNKVIVPFEKIRTRKKAISRIYELLDEDASKGLPMRAAVIHANREEEAAK 242
Query: 237 AQEMKESLQPYVKKPISVLETGSIIQTHTGENAWAV 272
E + P+V+ S G++I TH GE A +
Sbjct: 243 IIEELSAKYPHVEFYNSYF--GAVIGTHLGEGALGI 276
>gi|15806984|ref|NP_295709.1| degV protein [Deinococcus radiodurans R1]
gi|30179872|sp|Q9RSY3|Y1986_DEIRA UPF0230 protein DR_1986
gi|6459775|gb|AAF11538.1|AE002036_9 degV protein [Deinococcus radiodurans R1]
Length = 281
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 83/278 (29%), Positives = 144/278 (51%), Gaps = 11/278 (3%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
I IVTDS+ + PE L +T VPL V+ +G +Y D L + + +++ + +P TS
Sbjct: 3 IAIVTDSTSDLTPEHLAALGVTGVPLYVLFEGQLYQDGVQLSARQLVEGVRAGKAIPSTS 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAM 122
QP FA + + E +++S+H+S LSGTV +AR A VTVVD+ + +
Sbjct: 63 QPSPAEFAQAYAQALEHADEVLSLHISGQLSGTVGSARLAAQEFGGRVTVVDTHTVTLGL 122
Query: 123 KFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLL 182
QV AA+L + G + +I+ +E V + +L + TL+ L GRIG S L+ LL
Sbjct: 123 GLQVLRAAELVRAGQSVPQIVQTLERVYPQADLRFTVDTLDFLRLNGRIGGASALLGGLL 182
Query: 183 NIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELG------ISYAGSPEL 236
NI+ ++ ++ +++ + RG KK L DL+ +++ + V++ G ++ G E
Sbjct: 183 NIKPLLVVRGGRVDAGGRVRGQ---KKALADLAEHVR-RYVSQHGGARVAFLATVGGEED 238
Query: 237 AQEMKESLQPYVKKPISVLETGSIIQTHTGENAWAVLI 274
++ L + + E G+++ H G A V +
Sbjct: 239 RAAVRAQLSDLHFQDMGDHEIGAVVTVHAGPGAVGVAL 276
>gi|42519106|ref|NP_965036.1| hypothetical protein LJ1180 [Lactobacillus johnsonii NCC 533]
gi|41583393|gb|AAS09002.1| hypothetical protein LJ_1180 [Lactobacillus johnsonii NCC 533]
Length = 295
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 80/283 (28%), Positives = 142/283 (50%), Gaps = 16/283 (5%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
KI ++TDS+ I PE AK DIT+VP+ V++ Y D D+ + L + PKT
Sbjct: 2 KIALITDSTSDISPEEAKANDITVVPIPVIIGDKQYMDGVDITAEKLFELERDGAPFPKT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANA----DVTVVDSS 116
SQP G ++ +L +G + II+I ++ +SG + TLA+ ++ D +
Sbjct: 62 SQPSPGTMLELCQKLKNEGYEAIIAIPLTSGISGFYNSL---VTLAHNHPEFNLYPYDPA 118
Query: 117 FIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSG 176
++M V AAK+ K G + +EI++K++E+++ ++ + L NLV+GGR+ S
Sbjct: 119 MTVRSMGNLVLAAAKMIKNGWEPKEILSKLDEIRDTIDVLFVVDDLNNLVRGGRLSNASA 178
Query: 177 LISSLLNIRVIMQMK--DHQLEPIVKGRGAKTFKKWLDDLSANLQN----KQVAELGISY 230
I ++L I+ ++ K D+Q+ K R K K ++++ N K L +
Sbjct: 179 FIGTMLQIKPLLTFKKDDYQIVSFDKVRSMKRAVKKAENITIERINNSPIKDKLSLAVYN 238
Query: 231 AGSPELAQEMKESLQ-PYVKKPISVLETGSIIQTHTGENAWAV 272
+ E A ++K Q + I + S+I T+ GE + +
Sbjct: 239 SNDLEQATKVKNDFQAAFPNMTIKMFNFSSVIATYLGEKSLGI 281
>gi|116333002|ref|YP_794529.1| hypothetical protein LVIS_0332 [Lactobacillus brevis ATCC 367]
gi|116098349|gb|ABJ63498.1| hypothetical protein LVIS_0332 [Lactobacillus brevis ATCC 367]
Length = 284
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 6/247 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKT 61
KI I+ DS + EV + D+ ++P++V+ VY D + EF R + + T
Sbjct: 5 KIAILVDSCSDVPAEVLEAADMALMPMNVVFRDRVYEDRVTITPTEFYRRQATEK--ATT 62
Query: 62 SQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQ 120
+ P D +R+ G +I++ +S ALSGT + + A + V VV++ +
Sbjct: 63 ASPTGKRILDALERIQASGYTHVIAVCISAALSGTYQETQLLAEDSPLTVHVVNTRSVGI 122
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
F AA+L ++G E+I+A++E V +T+++ + +L+ L GGRIGRV+G+ +
Sbjct: 123 GSGFAAIYAAELREQGKTFEQIVAEVERVTAQTKVFFYVPSLKYLQAGGRIGRVAGMAGT 182
Query: 181 LLNIRVIMQMKDHQL-EPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
LLN++ I+ + PI K RG K T K LD ++ + + + + PEL Q
Sbjct: 183 LLNVKPIISCDPEGVYYPIAKVRGEKRTISKLLDLVATTIGTAKRVNVAVCDGADPELRQ 242
Query: 239 EMKESLQ 245
+ E LQ
Sbjct: 243 AVLEKLQ 249
>gi|150391339|ref|YP_001321388.1| degV family protein [Alkaliphilus metalliredigens QYMF]
gi|149951201|gb|ABR49729.1| degV family protein [Alkaliphilus metalliredigens QYMF]
Length = 282
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 74/278 (26%), Positives = 136/278 (48%), Gaps = 5/278 (1%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M IKI+TDS+ + + ++ I ++PL + D Y D D+ +++++ LP
Sbjct: 1 MNLIKIITDSTSDLPLSLLEKEKIPVIPLYISFDDHTYRDGIDMTPAVLYDKVKATKALP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGAT-LANADVTVVDSSFI 118
KT+ P F +VF+ + G I+ I +S LS T++ AR A+ + V+DS +
Sbjct: 61 KTAAPSPVDFRNVFESYIDQGMDILYIGLSSKLSSTIQNARIAASEFPEGRIEVIDSLNL 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ V EA L K L E+ +I + K Y + +L+ L KGGR S
Sbjct: 121 SAGIGLLVIEALDLVKTEKPLHEVATEIRHLIPKVTTYFAVDSLDYLHKGGRCSAASNFF 180
Query: 179 SSLLNIRVIMQMKDHQ--LEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPEL 236
S+L IR I+++ + L+ V+G+ + K LD + A+ + + I+++ P+
Sbjct: 181 GSILKIRPILKVDGGKILLDQKVRGKRERLIKAMLDRIYADQEKLNPKRVIINHSFCPKD 240
Query: 237 AQEMKESLQPYVK-KPISVLETGSIIQTHTGENAWAVL 273
A +K L+ + + I + G +I +H G ++++
Sbjct: 241 AGYLKSELEKTLDIEEILMTTAGCVISSHCGPGTFSIV 278
>gi|150391192|ref|YP_001321241.1| degV family protein [Alkaliphilus metalliredigens QYMF]
gi|149951054|gb|ABR49582.1| degV family protein [Alkaliphilus metalliredigens QYMF]
Length = 285
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 72/275 (26%), Positives = 134/275 (48%), Gaps = 7/275 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
+KI+TDS+ I + EL I +V L V + + +++ F ++M + + +PK+SQ
Sbjct: 3 VKILTDSTSYISESIKDELAIRVVSLRVAFSEHTFKETEIDNERFYKMM-AEQGIPKSSQ 61
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLA-----NADVTVVDSSFI 118
PP+G + + ++G ++I + +S +SGT A + NA++ ++DS
Sbjct: 62 PPMGELCHEMENVVKEGDELICLFLSSEMSGTYATAHMAKDMVLQSYPNANIEILDSRSN 121
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ F V EAA+ AKE LEE+ E+ +K+ L+ L +GGRIGR + +I
Sbjct: 122 CMQLGFAVIEAARAAKENKTLEEVKKAAEDNMKKSRFLFIPDNLKYLEQGGRIGRANAII 181
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGR-GAKTFKKWLDDLSANLQNKQVAELGISYAGSPELA 237
+L I I+ ++D K R K + + ++++ V E+ + + + A
Sbjct: 182 GNLFKIIPILTVEDGMTTIFKKVRTKKKATSTIIGQVLKDIEDFGVGEIVVHHINCADEA 241
Query: 238 QEMKESLQPYVKKPISVLETGSIIQTHTGENAWAV 272
+ + ++ V I + + G +I H G A V
Sbjct: 242 KNVATEIRKVVDVEIMIQDIGPVIGLHVGPGAIGV 276
>gi|134301147|ref|YP_001114643.1| degV family protein [Desulfotomaculum reducens MI-1]
gi|134053847|gb|ABO51818.1| degV family protein [Desulfotomaculum reducens MI-1]
Length = 282
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 147/286 (51%), Gaps = 24/286 (8%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-------ADLEEGEFLRLMQSS 55
K+ +VTDS+ ++ E+ + +I ++PL+V +YSD D+ E M
Sbjct: 4 KVAVVTDSTCDLDKELIHKYNIHVLPLNV-----IYSDEEEYLDRVDISPKEIYDRMPGE 58
Query: 56 RNLPKTSQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGA-TLANADVTVV 113
+P TS P ++F +L ++G +ISIH+S LSGT A R A N + V+
Sbjct: 59 --VPSTSLPSPANIINLFKKLEKEGFTHVISIHISSGLSGTYNAVRTIARDFKNMVIEVI 116
Query: 114 DSSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGR 173
DS + + V EAAK KE + + + K +++ KTE+Y + TL+ L KGGRIG
Sbjct: 117 DSKALSLGLGIPVLEAAKSIKETMNFDVAVKKAKDIMSKTEIYFVVGTLDYLRKGGRIGY 176
Query: 174 VSGLISSLLNIRVIMQMKD---HQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISY 230
V+G I ++ I+ I+ + + + V+GR K+ K + S +++K+V + + +
Sbjct: 177 VAGTIGEIMQIKPIISINEEGKYYTFDKVRGR-KKSLHKLFEITSKKIESKKVT-VAVMH 234
Query: 231 AGSPELAQEMKESLQ--PYVKKPISVLETGSIIQTHTGENAWAVLI 274
G+ + A+E+ + ++ P V+ + + G +I H G V I
Sbjct: 235 GGAGDEAKELLDKIKQLPNVENTYTG-QVGPVIGVHAGPGLIGVCI 279
>gi|68055665|ref|ZP_00539808.1| DegV [Exiguobacterium sibiricum 255-15]
gi|68007800|gb|EAM87044.1| DegV [Exiguobacterium sibiricum 255-15]
Length = 281
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 11/279 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M++I I+TDS+ + +E ++ + PLSV+ DG Y + D+ +F + +Q+ +LP
Sbjct: 1 MSQIVILTDSTAYLPTTYCEENNVHVAPLSVIFDGDAYREGLDISVPDFYQRIQTG-SLP 59
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQ-GATLANADVTVVDSSFI 118
TSQP +G + F++L + G II I +S +SGT +A + + +V +DS
Sbjct: 60 TTSQPNIGDLVESFEQLPQ-GTDIIGITLSSGISGTYQALHTINMMVEHVEVHPIDSRIS 118
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
F V EA ++ GA EI+A++E +K+ Y + LE+L +GGR+ ++
Sbjct: 119 CMPQAFLVKEAVRMRDAGATALEIVARLEALKDVIRAYFVVDDLEHLHRGGRLSMTQAVV 178
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDD-LSANLQNKQVAE-LGISYAGSPEL 236
S L I+ ++ D ++ P K R K K +++ + +Q +G+ +A
Sbjct: 179 GSFLKIKPVLHFVDGKIVPFEKIRTFKRAVKRIEEMMDETIQGTGAGYVIGVIHAEDSSK 238
Query: 237 AQEMKESLQ---PYVKKPISVLETGSIIQTHTGENAWAV 272
A+ LQ P + +SV G +I TH G A +
Sbjct: 239 AEAEIAVLQERFPDARMEMSVF--GPVIGTHLGPGAIGI 275
>gi|118478218|ref|YP_895369.1| DegV family protein [Bacillus thuringiensis str. Al Hakam]
gi|118417443|gb|ABK85862.1| DegV family protein [Bacillus thuringiensis str. Al Hakam]
Length = 286
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 79/277 (28%), Positives = 146/277 (52%), Gaps = 20/277 (7%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLE--EG---EFLRLMQSSRN- 57
+KI+TDS+ + E+ + DI ++PL V Y +A+ E +G + + L+Q+ R
Sbjct: 3 VKIITDSAADLPVELLQAYDIDLIPLRV------YDEAETEYLDGVTLDSVTLLQNMREG 56
Query: 58 -LPKTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-----RQGATLANADVT 111
+ +TS P + F + F A++G I + S LSGT +++ T A+ D+
Sbjct: 57 AVYRTSLPSLETFQEKFVSYAKEGNPCIYLAFSSELSGTYQSSVVIKEEVKETYADLDLE 116
Query: 112 VVDSSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRI 171
++D+ V EAAK+AKEGA E+I+ +++ + E ++ L+ LV+GGR+
Sbjct: 117 IIDTKCASLGQGLVVLEAAKMAKEGASKEDILKRVDFLMNHMEHIFTVADLQYLVRGGRL 176
Query: 172 GRVSGLISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISY 230
+V+G I LLNI+ I+ +++ +L P+ K RG K + +D + + + +G+++
Sbjct: 177 SKVAGFIGGLLNIKPILNVEEGKLVPLEKVRGKKKVLSRIVDIMEERGKELKGQTIGMTH 236
Query: 231 AGSPELAQEMKESLQPYVKKPISVLET-GSIIQTHTG 266
E A+ +K + + ++ T G+ I HTG
Sbjct: 237 GDDLETAEALKALITERFGCEVFIVNTIGAAIGAHTG 273
>gi|89098058|ref|ZP_01170944.1| YitS [Bacillus sp. NRRL B-14911]
gi|89087221|gb|EAR66336.1| YitS [Bacillus sp. NRRL B-14911]
Length = 286
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 85/281 (30%), Positives = 134/281 (47%), Gaps = 7/281 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
+KI+ DS+ + K+ D+ + PL V++DG Y D E + + S PKTSQ
Sbjct: 3 VKIMADSASDLPLHFFKDNDVLLFPLQVLLDGQEYKDLITIEPKKVYDSIRSGQTPKTSQ 62
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-----VTVVDSSFI 118
F F LA G + I I S LSGT + A D ++++D+
Sbjct: 63 VSPVDFEKEFRELARSGREGIYIAFSSQLSGTYQTAAMVRDQVKEDYPDLSLSIIDTKCA 122
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
V EAA+L+ EGA LEEI I E + L+ L KGGR+ + S +
Sbjct: 123 SLGAGLIVKEAARLSAEGASLEEIEKDILFRSRHMEHLFTVEDLDYLAKGGRVSKASAFL 182
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAE-LGISYAGSPELA 237
LLNI+ ++ ++D +L PI K RG K + + +++ + + IS+A + E A
Sbjct: 183 GGLLNIKPLLHVEDGKLVPIEKIRGKKKLLRRMIEVAKERGKGFSGQTIAISHADNLETA 242
Query: 238 QEMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
+E+KE L + K + + + G+ I +HTG A+ E
Sbjct: 243 EEVKEMLIEELGAKEVLISDIGAAIGSHTGAGTIALFFLNE 283
>gi|52079606|ref|YP_078397.1| conserved protein YitS [Bacillus licheniformis ATCC 14580]
gi|52784969|ref|YP_090798.1| YitS [Bacillus licheniformis ATCC 14580]
gi|52002817|gb|AAU22759.1| conserved protein YitS [Bacillus licheniformis ATCC 14580]
gi|52347471|gb|AAU40105.1| YitS [Bacillus licheniformis DSM 13]
Length = 286
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 79/281 (28%), Positives = 132/281 (46%), Gaps = 15/281 (5%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
+ ++ DS+ + E I+ +PL V++D Y D ++ + M+ + PKTS
Sbjct: 3 VHLLADSAADLPKSFYDEHRISFIPLRVLLDEKEYDDLLTIQPLDVYEAMREGK-APKTS 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGAT-----LANADVTVVDSSF 117
QP + +F + F LA + + I S LSGT + A A + D+ ++DS
Sbjct: 62 QPSLMLFKNAFSELANENKPALYIAFSSELSGTYQTAVMAANEVKEEFPDFDLRIIDSKC 121
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
V A KLA G ++EI + +++ E E + L L +GGRI + S
Sbjct: 122 ASLGYGLAVKHALKLATNGNTIQEIESSVKDFCEHLEHIFTVDDLTYLARGGRISKASAF 181
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDL----SANLQNKQVAELGISYAGS 233
+ LLNI+ ++ + D +L P+ K RG K + + +L S +L + V GIS+
Sbjct: 182 VGGLLNIKPLLHVDDGKLVPLEKIRGKKKLLRRMIELMKERSVDLSGQTV---GISHGDD 238
Query: 234 PELAQEMKESLQP-YVKKPISVLETGSIIQTHTGENAWAVL 273
E A+E+K ++ + + I V GS + H G AV
Sbjct: 239 EETAEEVKRMIEAEFQPEEIVVNMIGSAVGAHAGPGTLAVF 279
>gi|81427644|ref|YP_394641.1| Hypothetical protein, DegV family [Lactobacillus sakei subsp. sakei
23K]
gi|78609283|emb|CAI54330.1| Hypothetical protein, DegV family [Lactobacillus sakei subsp. sakei
23K]
Length = 286
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 7/278 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLPKT 61
K IVTDS+ ++P+VA+ I +VP++V+ Y + ++ EF M+++ LP T
Sbjct: 2 KTAIVTDSAAYLDPQVAQANQIIVVPITVIFSQQTYLENIEISTTEFYEKMRTTDKLPTT 61
Query: 62 SQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFID 119
SQ +G VFD+L EDG ++I IH+S ++ + + A + V DS
Sbjct: 62 SQITMGQMQMVFDQLIEDGFDEVICIHLSSGITSFINNLQAYARQVEGITVYPFDSKVTS 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
F EAA+L +G D E I+ K+ ++E +Y + L +L++ GRI + +
Sbjct: 122 AGEAFLALEAARLVAQGEDAETIMPKLAALRETIGVYFVVDDLSHLMRTGRISNGAAFVG 181
Query: 180 SLLNIRVIMQMKDH-QLEPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAG-SPEL 236
+LL I+ I+ ++ + K R K F+K L D A + G +PE
Sbjct: 182 NLLRIKPILSFDTAGKIVALTKERTKKRAFQKVLTDFEAAVAAADYPIRACVIDGNNPEE 241
Query: 237 AQEMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVL 273
+ + E+L + PI G ++ HTGE ++
Sbjct: 242 SAQWVETLTTKFPGMPIETSHIGPVVGVHTGEKVMGII 279
>gi|42781962|ref|NP_979209.1| degV family protein [Bacillus cereus ATCC 10987]
gi|42737886|gb|AAS41817.1| degV family protein [Bacillus cereus ATCC 10987]
Length = 286
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 79/277 (28%), Positives = 145/277 (52%), Gaps = 20/277 (7%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLE--EG---EFLRLMQSSRN- 57
+KI+TDS+ + E+ + DI ++PL V Y +A+ E +G E + L+Q+ R
Sbjct: 3 VKIITDSAADLPVELLQAYDIDLIPLRV------YDEAETEYLDGVTLESVTLLQNMREG 56
Query: 58 -LPKTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-----RQGATLANADVT 111
+ +TS P + F + F A++G I + S LSGT +++ T AN D+
Sbjct: 57 AVYRTSLPSLETFQEKFVSYAKEGNPCIYLAFSSELSGTYQSSVLIKEEVKETYANLDLE 116
Query: 112 VVDSSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRI 171
++D+ V EAAK+AK+GA E+I+ +++ + E ++ L+ LV+GGR+
Sbjct: 117 IIDTKCASLGQGLVVLEAAKMAKDGASKEDILKRVDFLMSHMEHIFTVADLQYLVRGGRL 176
Query: 172 GRVSGLISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISY 230
+V+G I LLNI+ I+ +++ +L P+ K RG K + +D + + + + +++
Sbjct: 177 SKVAGFIGGLLNIKPILNVEEGKLVPLEKVRGKKKVLSRIVDIMEERGKELKGQTIAMTH 236
Query: 231 AGSPELAQEMKESLQPYVKKPISVLET-GSIIQTHTG 266
E A+ +K + + ++ T G+ I HTG
Sbjct: 237 GDDIETAEALKALITERFGCEVFIVNTIGAAIGAHTG 273
>gi|148657623|ref|YP_001277828.1| degV family protein [Roseiflexus sp. RS-1]
gi|148569733|gb|ABQ91878.1| degV family protein [Roseiflexus sp. RS-1]
Length = 282
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 75/280 (26%), Positives = 136/280 (48%), Gaps = 9/280 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLP 59
M IKIVTDSS I VA EL I IVP+ +++ Y + D+ +F + +Q +R
Sbjct: 1 MASIKIVTDSSCDIPLSVAHELGIEIVPMQIVIGNQSYRAGLDITAEQFYQALQENRTQV 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGAT---LANADVTVVDSS 116
PP+ F ++ RL + I S+H+S L A+Q +++ V V+DS
Sbjct: 61 TVQPPPMTAFEQLYRRLTVEYEHIFSLHLSGRLVPAYHVAQQARNRLPASSSRVEVIDSK 120
Query: 117 FIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSG 176
+ A+ V AA+ A++GA EE I + + L + T+E L GR+ +
Sbjct: 121 LLSMALGMVVVHAARAARDGATPEETAHLINLLIQHCHLVFFVDTIEYLEHSGRLALATT 180
Query: 177 LISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN-KQVAELGISYAGSPE 235
++ S+ I+ ++ + D ++ P + R T K ++ L +++ +V E+ YA +PE
Sbjct: 181 VLGSMQRIKPLLLLDDGEIVPYERTR---TRAKAIEGLYTFIEDFPRVREVTALYATTPE 237
Query: 236 LAQEMKESLQP-YVKKPISVLETGSIIQTHTGENAWAVLI 274
+++ E + P + + + ++ G + G A V +
Sbjct: 238 DVEKLLEKVDPIFPRDRVQTMQFGPSVGAFLGPGAMGVAV 277
>gi|106880137|emb|CAJ70740.1| degV [Bacillus licheniformis]
Length = 230
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 2/205 (0%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLPKT 61
K +VTDS+ I ++ +I ++PL+V+ Y + D+ ++ + +++ NLP T
Sbjct: 2 KTAVVTDSTAYIPKDLRDRYNIHMIPLNVIFGETSYREEIDMSWKDYYKEVKAHENLPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFIDQ 120
SQP G ++++L E +ISIH+S +SGT +A + L V DS
Sbjct: 62 SQPAYGELISLYEKLGETYDAVISIHLSSGISGTFNSAVSASGMLEGIKVYPFDSEISCM 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
A F EAA++A++GA EEII ++ +K Y + L +L +GGR+ + S
Sbjct: 122 AQGFYAIEAAEMAEKGAAPEEIIRHLDHMKTSMRAYFMVDDLSHLQRGGRLSGAQAFVGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAK 205
LL ++ I+ ++ + P K R K
Sbjct: 182 LLKVKPILHFENKLIVPYEKIRTRK 206
>gi|154685542|ref|YP_001420703.1| YitS [Bacillus amyloliquefaciens FZB42]
gi|154351393|gb|ABS73472.1| YitS [Bacillus amyloliquefaciens FZB42]
Length = 283
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 78/277 (28%), Positives = 124/277 (44%), Gaps = 7/277 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNLPKTSQ 63
+ ++ DS+ + +E I +PL V +DG Y D + + + +PKTSQ
Sbjct: 3 VHLIADSASDLPKSYIEENRIGFIPLHVTLDGNEYEDTVTIQADHIFQAMRDGKVPKTSQ 62
Query: 64 PPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGAT-----LANADVTVVDSSFI 118
VF + AE G I I S LSGT + A A + D+ +VDS
Sbjct: 63 ASPDTIKKVFLQYAELGEPAIYIAFSSGLSGTYQTAVMIANEVKEEFPDFDLRIVDSKCA 122
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
V A L G ++EI ++ + + + + L +GGRI + S +
Sbjct: 123 SLGCGLAVMHAQTLCVNGNTIQEIETSVKSFCARMKHIFTVDDVAYLARGGRISKTSAFV 182
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKT-FKKWLDDLSANLQNKQVAELGISYAGSPELA 237
LLNI+ I+ + D +L P+ K RG K FK+ ++ + + +GISYA + E A
Sbjct: 183 GGLLNIKPILHVDDGRLVPLEKLRGQKKLFKRIIEKMKEEGGDWADQTVGISYADNEETA 242
Query: 238 QEMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVL 273
MKE + + + K I + GS I H+G A+
Sbjct: 243 LRMKEMIEEAFHPKEIILHSIGSAIGAHSGPGTLAIF 279
>gi|124520708|ref|ZP_01695825.1| degV family protein [Bacillus coagulans 36D1]
gi|124497400|gb|EAY44961.1| degV family protein [Bacillus coagulans 36D1]
Length = 307
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 9/282 (3%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKTS 62
I+I DS+ + KE + ++PL+V V+ Y D ++ E RL+++ KTS
Sbjct: 25 IQIFADSASDLPLSFFKENHVHLIPLTVYVEDKSYDDLVGIDPKEVFRLIRAGVG-TKTS 83
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGA-----TLANADVTVVDSSF 117
QP F +F LA+ G I + S LSGT + A A N D+TV+D+
Sbjct: 84 QPSPQYFEKLFTDLAKSGDTGIYLAFSSELSGTYQTAAMIADQVKEAYPNLDLTVLDTKC 143
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
V AA L K GA EEII + E + L+ L +GGR+ + S
Sbjct: 144 ASIGYGLVVKAAADLRKNGAGKEEIIRDAAFRSKHMEHIFTVPDLDFLARGGRLSKTSAF 203
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPEL 236
LLNI+ I+ ++D +L PI K RG K + LD + + + +GI +
Sbjct: 204 FGGLLNIKPILDVEDGKLIPIEKIRGRKKLLHRMLDIMEERGTDLEHQLIGICHGDDETA 263
Query: 237 AQEMKESLQP-YVKKPISVLETGSIIQTHTGENAWAVLIRYE 277
A+EMK+ ++ + K + G++I +H G +V E
Sbjct: 264 AEEMKQLIEARFGTKQFLINTIGAVIGSHAGPGTISVFFLNE 305
>gi|78356687|ref|YP_388136.1| degV family protein [Desulfovibrio desulfuricans G20]
gi|78219092|gb|ABB38441.1| degV family protein [Desulfovibrio desulfuricans G20]
Length = 604
Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 72/278 (25%), Positives = 139/278 (50%), Gaps = 7/278 (2%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
++ IVTDS+ + ++ +E I PL + +D + D + EF ++ SR+ KT
Sbjct: 325 RVGIVTDSTCDLPEDLMQEYGIRFAPLKLYLDEEEFIDKLSISTAEFNSRLRVSRS-AKT 383
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQA 121
SQP F ++D + +++S+H+ SGT+++A +A+ V D +
Sbjct: 384 SQPSPADFKHLYDDMLALHDEVVSLHVMAKYSGTLQSAANIGKMASKPVHTFDGQTLSAG 443
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
+ V EAAK A+ G D I+ + + +++ + TL+ V+GGR+ + +G ++
Sbjct: 444 LGLLVLEAAKRARAGLDAPAILDMAAKDVKNLHVFVAMDTLDFAVRGGRMSKGAGAVAKF 503
Query: 182 LNIRVIMQM--KDHQLEPIV-KGRGAKTFK-KWLDDLSANLQNKQVAELGISYAGSPELA 237
LNI+ +++ +DH +V KG G + + K L L + K+ + I++ +PE A
Sbjct: 504 LNIKPVLEFDARDHGTVKVVEKGLGRRMAELKLLRRLEKTISGKKNIRIAIAHVSAPESA 563
Query: 238 QEMKESLQPYV-KKPISVLETGSIIQTHTGENAWAVLI 274
+ + + P+ +E ++ TH+G A AV +
Sbjct: 564 GHLGRLITERLGTAPLYTIEASPVLGTHSGPGACAVAV 601
>gi|29374675|ref|NP_813827.1| DegV family protein [Enterococcus faecalis V583]
gi|29342133|gb|AAO79899.1| DegV family protein [Enterococcus faecalis V583]
Length = 289
Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 74/279 (26%), Positives = 139/279 (49%), Gaps = 10/279 (3%)
Query: 5 KIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRN--LPKTS 62
++VTDS + KE + + +++ +DG Y D E ++ + + +N +P TS
Sbjct: 4 QLVTDSCCDLPYTYLKENQVPFISMNIQIDGKEYRDDLGETFDYQNFLTAIKNGSMPTTS 63
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLA-----NADVTVVDSSF 117
Q VG + + F E G +I + S LSG+ ++A Q + N ++ ++D+
Sbjct: 64 QVNVGRYNEFFRPFVEQGLPVIYLAFSSGLSGSYQSALQSVEMLKEEYDNVEIHIIDTKA 123
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
V EA +L +G L E++A +EE K K ++ + L++L +GGRI + +
Sbjct: 124 ASLGQGMLVREAIRLQTDGHSLGEVVAYLEEQKMKLHSWVTVDDLKHLERGGRISKTAAA 183
Query: 178 ISSLLNIRVIMQMKDH-QLEPIVKGRGA-KTFKKWLDDLSANLQNKQVAELGISYAGSPE 235
+ L+NI+ I+++ +L + K RG K+ +K + + L I+YAG+ +
Sbjct: 184 LGGLMNIKPIIRVDAAGKLASVGKTRGRNKSLQKIAQETIQGIVEPMKQTLLIAYAGTKD 243
Query: 236 LAQEMKESLQPYVK-KPISVLETGSIIQTHTGENAWAVL 273
A+++KE ++ ++ I + G I +HTG AV
Sbjct: 244 DAEKVKELIEKEIEVNEILIYPLGPTITSHTGIGCIAVF 282
>gi|146321748|ref|YP_001201459.1| hypothetical protein SSU98_1901 [Streptococcus suis 98HAH33]
gi|145692554|gb|ABP93059.1| Uncharacterized protein conserved in bacteria [Streptococcus suis
98HAH33]
Length = 287
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 83/278 (29%), Positives = 142/278 (51%), Gaps = 13/278 (4%)
Query: 6 IVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYS---DADLEEGEFLRLMQSSRNLPKTS 62
IVTDS+ + +E D+T++ L++ +DG Y + L + L M S P TS
Sbjct: 5 IVTDSTSDLPISWVQENDVTVLGLTINLDGATYETVGENRLTSADLLEKMASGSQ-PTTS 63
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLA-----NADVTVVDSSF 117
Q VG F +VF+ A++ +++ + S ALSGT ++A + A +T+VD+
Sbjct: 64 QVNVGQFEEVFEAAAKEDHEVLYLAFSAALSGTYQSAVIARDMVMDQYPEAVITIVDTKA 123
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
+ V +A + G L E A +E++ + Y+ + L +LV+GGR+ + + L
Sbjct: 124 ATIGEGYLVMKAVEARAAGKTLAETKAIVEDLVPRLRTYLLVDDLNHLVRGGRLSKAAAL 183
Query: 178 ISSLLNIRVIMQMK-DHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPEL 236
I L+NI+ ++ + + +LE I K RG K K + L+ L N + + ++Y G E
Sbjct: 184 IGGLVNIKPLLALNAEGKLEAIAKIRGRKKGIKEM--LNLTLDNLDHSTVMVAYTGDIEA 241
Query: 237 AQEMKESLQPYVK-KPISVLETGSIIQTHTGENAWAVL 273
A+ +K SL + + + E G +I THTG A+L
Sbjct: 242 AEGVKSSLLEDDRISDVLLTELGPVIATHTGTGVLAIL 279
>gi|154500385|ref|ZP_02038423.1| hypothetical protein BACCAP_04052 [Bacteroides capillosus ATCC
29799]
gi|150270890|gb|EDM98173.1| hypothetical protein BACCAP_04052 [Bacteroides capillosus ATCC
29799]
Length = 281
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 80/277 (28%), Positives = 140/277 (50%), Gaps = 10/277 (3%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
IKI +DS+ + PE+ + IVPL+++ DG Y D ++ + R + + ++ T+
Sbjct: 3 IKITSDSTCDLSPELVSRYQVEIVPLTIVKDGKPYRDGLEITPDDIFRHVDAGGDITSTT 62
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAM 122
VG + DVF RL+ +I I++S S + A A + +V VVDS +
Sbjct: 63 AVSVGEYRDVFARLSPAHDAVIHINISAEFSSCYQNACIAAEEFD-NVYVVDSRNLSTGH 121
Query: 123 KFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLL 182
V EAA A+ G +EI+A + ++ + E L+ L+ +VKGGR V+ L ++LL
Sbjct: 122 GLVVIEAALAAQRGMAPKEIVAYLNDLTGRVEASFILNRLDYMVKGGRCSAVAMLGANLL 181
Query: 183 NIRVIMQMKDHQLEPIVKGRGAKTFKKW-LDDLSANLQNK---QVAELGISYAGSP-ELA 237
++ +++KD ++ K RG TF+K LD + LQ + + + I+ + +P E
Sbjct: 182 RLKPCIEVKDGKMGVAKKYRG--TFEKCVLDYVKDRLQGRTDLETDRIFITCSTAPKETV 239
Query: 238 QEMKESLQPYVK-KPISVLETGSIIQTHTGENAWAVL 273
+++ ++ Y K I G + TH G N +L
Sbjct: 240 DQVRAAIAEYAPFKEILETRAGCTVSTHCGPNTLGIL 276
>gi|106880143|emb|CAJ70745.1| degV [Bacillus licheniformis]
Length = 246
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 2/205 (0%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLPKT 61
K +VTDS+ I ++ +I ++PL+V+ Y + D+ ++ + +++ NLP T
Sbjct: 2 KTAVVTDSTAYIPKDLRDRYNIHMIPLNVIFGETSYREEIDMSWKDYYKEVKAHENLPTT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFIDQ 120
SQP G ++++L E +ISIH+S +SGT +A + L V DS
Sbjct: 62 SQPAYGELISLYEKLGETYDAVISIHLSSGISGTFNSAVSASGMLEGIKVYPFDSEISCM 121
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
A F EAA++A++GA EEII ++ +K Y + L +L +GGR+ + S
Sbjct: 122 AQGFYAIEAAEMAEKGAAPEEIIRHLDHMKTSMRAYFMVDDLSHLQRGGRLSGAQAFVGS 181
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAK 205
LL ++ I+ ++ + P K R K
Sbjct: 182 LLKVKPILHFENKLIVPYEKIRTRK 206
>gi|154249059|ref|YP_001409884.1| degV family protein [Fervidobacterium nodosum Rt17-B1]
gi|154152995|gb|ABS60227.1| degV family protein [Fervidobacterium nodosum Rt17-B1]
Length = 288
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 89/280 (31%), Positives = 135/280 (48%), Gaps = 17/280 (6%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSV-MVDGVVYSD--ADLEE-GEFLRLMQSSR 56
M KIKI+ DS+ E KE D+ IVPL V DG D D EE F ++S+
Sbjct: 1 MEKIKILVDSTSDFPKEQMKEWDVDIVPLYVNWPDGTSEKDDTRDFEELKRFYEKLKSAP 60
Query: 57 NLPKTSQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANADVTVVDS 115
LPK+SQP V + ++ L E G ++ I +S A+SGT +A A + V VVDS
Sbjct: 61 ELPKSSQPSVEDWKQKYNELKEQGYDGVLVITISTAMSGTFNSASLAAKEVDIPVRVVDS 120
Query: 116 SFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEE--VKEKTELYIGLSTLENLVKGGRIGR 173
A+ A +L G DLE + ++E+ + + + LVKGGR+ +
Sbjct: 121 KMASTAISPMARYARELINLGVDLETVAQELEKKIAAKGFGAFFYVQDFNFLVKGGRVSK 180
Query: 174 VSGLISSLLNIRV-IMQMKDHQLEPIVKGRGAKTFKKWLDDL-----SANLQNKQVAELG 227
+G + SLL IRV I ++ + P K RG FK +D+L S V +L
Sbjct: 181 FAGFVGSLLKIRVGIYINEEGNMVPFTKTRG---FKAIVDELIKKAESEGFTKDSVVDLY 237
Query: 228 ISYAGSPELAQEMKESLQPYVK-KPISVLETGSIIQTHTG 266
+ + E +E+++ L+ + + + TG +I TH G
Sbjct: 238 MVSCDNMEELKEIEKILREHYRVNNVYYTPTGKVISTHVG 277
>gi|55980919|ref|YP_144216.1| DegV family protein [Thermus thermophilus HB8]
gi|55772332|dbj|BAD70773.1| DegV family protein [Thermus thermophilus HB8]
Length = 274
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 74/266 (27%), Positives = 139/266 (52%), Gaps = 7/266 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKTS 62
+ V DS++ + PE AK L I +VP V+ G + D ++ GE LRL+ S L TS
Sbjct: 1 MAFVADSTLGLSPEEAKSLGIHVVPQQVLHRGRSFRDLVEIAPGEVLRLLCSGERL-TTS 59
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQAM 122
Q +++ L +++S+H+S LSGTV+ A++ A V V+DS + +
Sbjct: 60 QVAPEDLRKLYEALLRTHGRVVSVHVSGLLSGTVDTAKKVAQAFGDRVKVLDSWSLSGGL 119
Query: 123 KFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSLL 182
+ A +L +EG E + + +E+ Y+ +TL+ L + GRIG + + LL
Sbjct: 120 LLVLERARRLLEEGVAWEHLEEALAPYRERVRGYVLPATLDYLHRSGRIGGLRRFVGGLL 179
Query: 183 NIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNK--QVAELGISYAGSPELAQEM 240
I ++++++ ++ P + RG F + + ++A + + A + +++A +PE A+ +
Sbjct: 180 RILPVLEVREGRVHPGPRVRG---FAEGIRKVAALFRRDFPKEARVYLAHAENPEGAKAL 236
Query: 241 KESLQPYVKKPISVLETGSIIQTHTG 266
E+L+ + + VL G+ + HTG
Sbjct: 237 GEALKAEGVEVLGVLPAGAAVSVHTG 262
>gi|16078175|ref|NP_388992.1| hypothetical protein BSU11110 [Bacillus subtilis subsp. subtilis
str. 168]
gi|30179821|sp|P70945|YITS_BACSU UPF0230 protein yitS
gi|1620923|emb|CAB01833.1| putative ORF [Bacillus subtilis]
gi|2145412|emb|CAA70629.1| YitS [Bacillus subtilis]
gi|2633447|emb|CAB12951.1| yitS [Bacillus subtilis subsp. subtilis str. 168]
Length = 283
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 9/278 (3%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
+ ++ DS+ + +E I +PL V + + DA + + MQ+ PKTS
Sbjct: 3 VHLIADSATDLPRSYFEEKGIGFIPLRVSLGDKEFEDAVTIHADQIFEAMQNGET-PKTS 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGAT-----LANADVTVVDSSF 117
Q +VF + AE G + I S LSGT + A A + D+ V+DS
Sbjct: 62 QASPQTIKNVFLQYAETGDPALYIAFSSGLSGTYQTAVMIANEVKEEFPDFDLRVIDSKC 121
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
V AA L G ++EI ++ + E + L L +GGRI + S
Sbjct: 122 ASLGYGLAVRHAADLCINGNTIQEIETSVKNFCSQLEHIFTVDDLTYLARGGRISKTSAF 181
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKT-FKKWLDDLSANLQNKQVAELGISYAGSPEL 236
+ LLNI+ ++QM+D +L P+ K RG K FK+ ++ + + +GISYA + E
Sbjct: 182 VGGLLNIKPLLQMEDGKLVPLEKIRGQKKLFKRIIELMKERGDDWSNQTVGISYAANKEK 241
Query: 237 AQEMKESLQPYVK-KPISVLETGSIIQTHTGENAWAVL 273
A +MK ++ K K I + S I +H G A+
Sbjct: 242 ATDMKHLIEEAFKPKEIIMHPISSAIGSHAGPGTLAIF 279
>gi|156740621|ref|YP_001430750.1| degV family protein [Roseiflexus castenholzii DSM 13941]
gi|156231949|gb|ABU56732.1| degV family protein [Roseiflexus castenholzii DSM 13941]
Length = 282
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVY-SDADLEEGEFLRLMQSSRNLP 59
M IKIVTDSS I VA EL I IVPL ++V Y + D+ +F + MQ +R
Sbjct: 1 MASIKIVTDSSSDIPLSVAHELGIEIVPLQIVVGNQSYRAGLDITAEQFYQAMQENRAQI 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGAT---LANADVTVVDSS 116
PP+ F ++ RL + I SIH+S+ + A+Q +++ V ++DS
Sbjct: 61 AAQPPPMMTFEQLYRRLTLEYEYIFSIHLSNRIVPNYRVAQQARNRLPASSSRVEIIDSK 120
Query: 117 FIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSG 176
I A+ V AA+ ++GA +E+ I + + L + T+E L GR+ +
Sbjct: 121 LISMALGMIVIHAARAVRDGATPDEVTHLINLLIQHCHLVFFVDTIEYLEHSGRLALATT 180
Query: 177 LISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQN-KQVAELGISYAGSPE 235
++ S+ I+ ++ + D ++ P + R T K ++ L +++ +V E+ YA +PE
Sbjct: 181 VLGSMQRIKPLLLIDDGEIVPYERTR---TRAKAIEGLYTFIEDFPRVREVTALYATTPE 237
Query: 236 LAQEMKESLQP-YVKKPISVLETGSIIQTHTGENAWAVLI 274
+++ E + P + + + + + G + G A V +
Sbjct: 238 DVEKLLEKVDPIFPRDRVQIAQFGPSVGAFLGPGAMGVAV 277
>gi|157075516|gb|ABV10199.1| DegV family protein [Streptococcus gordonii str. Challis substr.
CH1]
Length = 283
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 76/275 (27%), Positives = 138/275 (50%), Gaps = 5/275 (1%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
K+ ++TDSS ++ EV ++ ++ I+ + V +DG Y + +L EF + M S LPKT
Sbjct: 2 KLAVITDSSAYLKLEVLEKENLFILDIPVFIDGKTYVEGKNLTAEEFYQKMALSAELPKT 61
Query: 62 SQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAAR-QGATLANADVTVVDSSFID 119
SQP + D+ L+ +G ++ + +S +SG + + ++ DS
Sbjct: 62 SQPSIAELEDLLSTLSGNGYTHVLGLFLSSGISGFYQNIQFLKDEFPQLEIAFPDSKITS 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ V A A+ G D EI+ +I + T +I + L +LVKGGR+ + ++
Sbjct: 122 APLGIMVQSALNWAEAGLDFNEILRRINVQIDGTSAFIMVDDLNHLVKGGRLSNGAAILG 181
Query: 180 SLLNIRVIMQMKDHQ-LEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
+LL+I+ I+ H +E K R K K L +L + E+ + +A + + A+
Sbjct: 182 NLLSIKPILYFNHHGVIEVFEKIRTEKKATKRLIELVEERTSSGKYEIIVIHANAVDKAE 241
Query: 239 EMKES-LQPYVKKPISVLETGSIIQTHTGENAWAV 272
+++S L+ + IS+ GS+I TH GE + A+
Sbjct: 242 TLRQSLLESNISAEISLATFGSVIGTHLGEGSIAL 276
>gi|24378680|ref|NP_720635.1| hypothetical protein SMU.165 [Streptococcus mutans UA159]
gi|24376543|gb|AAN57941.1|AE014868_3 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 286
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 80/279 (28%), Positives = 139/279 (49%), Gaps = 13/279 (4%)
Query: 5 KIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQ--SSRNLPKTS 62
KI+TDS+ + +E D+ ++ L+V +DG+ Y + L++ ++ + P TS
Sbjct: 4 KILTDSTADLPESWTQENDVQVLGLTVQLDGITYETVGPDRLTSRVLLEKIAAGSKPTTS 63
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLA-----NADVTVVDSSF 117
Q VG F F + AE+G +++ I S LSGT ++A + A + +VD+
Sbjct: 64 QVNVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARDIVLEEYPQASIEIVDTLA 123
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
+ AA+ +EG L+E I +V + + + L +L++GGR+ + S +
Sbjct: 124 AAGGEGYLAMLAAQAREEGKSLKETKELILDVGPRLRTFFLVDNLYHLMRGGRLSKTSAI 183
Query: 178 ISSLLNIRVIMQMK-DHQLEPIVKGRGAKT-FKKWLDDLSANLQNKQVAELGISYAGSPE 235
+ SL+NI+ ++ + +L PI K RG K K+ L +A++ + ++YA E
Sbjct: 184 VGSLVNIKPLLWLDASGKLVPIAKLRGRKKGMKEMLKRATADVAHDTAV---VAYANDSE 240
Query: 236 LAQEMKESLQPYVK-KPISVLETGSIIQTHTGENAWAVL 273
A+ +KE L K K + L G +I TH G N AV
Sbjct: 241 AAENLKEQLLANEKIKNVVTLPLGPVISTHVGPNTLAVF 279
>gi|46198892|ref|YP_004559.1| probable degV protein [Thermus thermophilus HB27]
gi|46196516|gb|AAS80932.1| probable degV protein [Thermus thermophilus HB27]
Length = 283
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 139/268 (51%), Gaps = 7/268 (2%)
Query: 2 TKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPK 60
+ + V DS++ + PE AK L I +VP V+ G + D ++ GE LRL+ S L
Sbjct: 8 SSVAFVADSTLGLSPEEAKSLGIHVVPQQVLHRGRSFRDLVEIAPGEVLRLLCSGERL-T 66
Query: 61 TSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQ 120
TSQ +++ L +++S+H+S LSGTV+ A++ A V V+DS +
Sbjct: 67 TSQVAPEDLRKLYEALLRTHGRVVSVHVSGLLSGTVDTAKKVAQAFGERVKVLDSWSLSG 126
Query: 121 AMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISS 180
+ + A +L +EG E + + +E+ Y+ +TL+ L + GRIG + +
Sbjct: 127 GLLLVLERARRLLEEGVAWEHLEEALAPYRERVRGYVLPATLDYLHRSGRIGGLQRFVGG 186
Query: 181 LLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNK--QVAELGISYAGSPELAQ 238
LL I ++++++ ++ P + RG F + + ++A + + A + +++A +PE A+
Sbjct: 187 LLRILPVLEVREGRVHPGPRVRG---FAEGIRKVAALFRRDFLEEARVYLAHAENPEGAK 243
Query: 239 EMKESLQPYVKKPISVLETGSIIQTHTG 266
+ E+L+ + + L G+ + HTG
Sbjct: 244 ALGEALKAGGVEVLGALPAGAAVSVHTG 271
>gi|116670793|ref|YP_831726.1| degV family protein [Arthrobacter sp. FB24]
gi|116610902|gb|ABK03626.1| degV family protein [Arthrobacter sp. FB24]
Length = 297
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 76/282 (26%), Positives = 139/282 (49%), Gaps = 10/282 (3%)
Query: 3 KIKIVTDSSVTIEPE----VAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRNL 58
+ +VTDS+ + + A + +T+VP+ VMV +Y + + + + + + ++
Sbjct: 2 RTAVVTDSAAALPADWVTDFAADGRLTVVPMPVMVGAEIYGEGEDDITDTIAVALATGTP 61
Query: 59 PKTSQPPVGVFADVFDRLAEDGAQ-IISIHMSHALSGTVEAARQGATLANADVTVVDSSF 117
KTS+P G F + G + ++S+H+S ALSGT ++AR AT V VVDS
Sbjct: 62 VKTSRPSPGQFEQAYLAALRRGFEAVVSVHISGALSGTADSARLAATRVGIPVEVVDSKT 121
Query: 118 IDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGL 177
+ A+ V A A +G E+ A E+ +T++Y + +LE L +GGRIG + L
Sbjct: 122 VGMALGMGVQSAVVAAADGRPAAEVRAFAEDRMARTKVYFYVPSLEQLRRGGRIGAAASL 181
Query: 178 ISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDL---SANLQNKQVAELGISYAGSP 234
++ I+ I+ + D ++ P+ K R A L+++ A + A L + + G+P
Sbjct: 182 WGTMFAIKPILAVDDGKIVPLEKVRSAARAVARLEEIVVADAAARPAGQARLAVHHFGNP 241
Query: 235 ELAQEMKESLQPYVKK--PISVLETGSIIQTHTGENAWAVLI 274
A E+ L + + P + +++ H G AV++
Sbjct: 242 GEAAELAGRLAAALPEVPPAQISSLPAVLAAHAGLGVLAVIV 283
>gi|75763900|ref|ZP_00743539.1| DegV family protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74488614|gb|EAO52191.1| DegV family protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 286
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 138/272 (50%), Gaps = 10/272 (3%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGEFLRLMQSSRN--LPKT 61
+KI+TDS+ + E+ + DI ++PL V D V D E + L+Q R + KT
Sbjct: 3 VKIITDSAADLPVELLQAYDIDLIPLRVY-DEVETEYLDGVTLESVTLLQKMREGAVYKT 61
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-----RQGATLANADVTVVDSS 116
S P + F + F A++G I + S LSGT +++ T A+ D+ ++D+
Sbjct: 62 SLPSLETFQEKFVSYAKEGNPCIYLAFSSELSGTYQSSVVIKEEVKETYADLDLEIIDTK 121
Query: 117 FIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSG 176
V EAAK+AK GA E+I+ ++ + E ++ L+ LV+GGR+ +V+G
Sbjct: 122 CASLGQGLVVLEAAKMAKNGASKEDILKRVAFLMNHMEHIFTVADLQYLVRGGRLSKVAG 181
Query: 177 LISSLLNIRVIMQMKDHQLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISYAGSPE 235
I LLNI+ I+ +++ +L P+ K RG K + +D + + + + +++ E
Sbjct: 182 FIGGLLNIKPILNVEEGKLVPLEKVRGKKKVLSRIVDIMEERGKYLKGQTIAMTHGDDLE 241
Query: 236 LAQEMKESLQPYVKKPISVLET-GSIIQTHTG 266
A+ +K + + ++ T G+ I HTG
Sbjct: 242 TAEALKALITERFGCEVFIVNTIGAAIGAHTG 273
>gi|106886839|ref|ZP_01354168.1| degV family protein [Clostridium phytofermentans ISDg]
gi|106765665|gb|EAT22415.1| degV family protein [Clostridium phytofermentans ISDg]
Length = 279
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 79/273 (28%), Positives = 132/273 (48%), Gaps = 4/273 (1%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKTS 62
+ I+TDS+ I A D+ +VPL + Y D + EF + + ++ +LP +S
Sbjct: 2 LHIITDSTSDITQVQAAREDLIVVPLHNLFGVEEYLDGVTISTEEFYQRLATAEDLPTSS 61
Query: 63 QPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-VTVVDSSFIDQA 121
QP F F+R E+G+ + I +S LSGT ++A + D + +VDS
Sbjct: 62 QPSPEEFLTHFNRCKEEGSSAVVITISSRLSGTFQSACIAKDMCEYDEIYLVDSFTATLG 121
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
+ V A L + G ++I ++E+ K+K ++ + TL+ L KGGR+ + L +L
Sbjct: 122 LNSLVQYAKILRERGLSAKQIAEELEDKKQKVRVFALVDTLKYLKKGGRLSASAALAGTL 181
Query: 182 LNIRVIMQMKDHQLEPIVKGRGAK-TFKKWLDDLSANLQNKQVAELGISYAGSPELAQEM 240
LNI+ I+++KD +E K RG + +KK ++ + I Y G L Q
Sbjct: 182 LNIKPIIEVKDGVVEVAAKSRGIQGAYKKVMELVEEANGIDMEFPYCIGYTGDINLTQNF 241
Query: 241 KESLQPYVKKP-ISVLETGSIIQTHTGENAWAV 272
+ Y+KK I+ + GS I H G A +
Sbjct: 242 DVHSKEYLKKQDITKVAIGSTIGVHVGPGACGI 274
>gi|153853918|ref|ZP_01995251.1| hypothetical protein DORLON_01242 [Dorea longicatena DSM 13814]
gi|149753300|gb|EDM63231.1| hypothetical protein DORLON_01242 [Dorea longicatena DSM 13814]
Length = 316
Score = 97.4 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 139/282 (49%), Gaps = 18/282 (6%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDADLEEGE---FLRLMQSSRNLP 59
K++IV+D S+ + E+ KE DI +VP V D Y +E G + +++ P
Sbjct: 21 KVQIVSDGSLDLSQEITKEHDIEVVPFYVSFDSETYQKEMVELGVRDFYNEMVEHPDVFP 80
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATL-----ANADVTVVD 114
K+S P V F VF++ ++ +I I ++ SG++++A + +A +T++D
Sbjct: 81 KSSMPSVDDFYQVFEKSVKEQIPVICICITRKFSGSLQSATVAKEMIEEEYPDAKITLID 140
Query: 115 SSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRV 174
S+ V EA +L G EEI+ KI ++E ++ + +++ L GGRIG++
Sbjct: 141 STVNTVLQGLFVLEACRLRDMGLGYEEIVEKILPIRETGRIFFTIGSIDYLRHGGRIGKL 200
Query: 175 SGLISSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELG-----IS 229
+G+ + L I+ ++ +K+ ++ R K + D++ N ++ A+ G I
Sbjct: 201 AGIAAGALGIKPMITLKEGEIFSSGLARNRIKSMKKVVDMTKNYLDEIDAKPGEYNFCIG 260
Query: 230 YAGSPELAQEMKESLQPYVKK-----PISVLETGSIIQTHTG 266
Y + A +E ++ +K+ I + + G+ I HTG
Sbjct: 261 YGYDYDEAVRFREMIKDLIKERLGIDEIGIYQIGATIGVHTG 302
>gi|18310292|ref|NP_562226.1| hypothetical protein CPE1310 [Clostridium perfringens str. 13]
gi|30179842|sp|Q8XKT3|Y1310_CLOPE UPF0230 protein CPE1310
gi|18144972|dbj|BAB81016.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 279
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 73/279 (26%), Positives = 142/279 (50%), Gaps = 11/279 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E+ ++ DI ++P+ + Y D +++ + ++ LP
Sbjct: 1 MDKIKIITDSTCDLSKEIIEKYDIDVMPMLINFGEESYLDGVEIKVDSMMERIEREDTLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGAT-LANADVTVVDSSFI 118
T+Q F + + E+G ++ISIH+S +SGT ++A T L + D+ V+DS +
Sbjct: 61 TTAQIVPTRFIEKYKGYLEEGYKVISIHISSNMSGTYQSACLAKTELESDDIVVIDSRNV 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ + +AA+L + G LE++ +I E + + I +L+NLV+GGR+ + L
Sbjct: 121 TVGLGLIILKAARLIESGITLEDLEKEILEYRNHIKSTIAFESLDNLVRGGRLSKGKALF 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
S L I++++ + D ++ K RG K K + + ++ K+ + + + ++
Sbjct: 181 VSALGIKLMLNVLDGEMNVQGKIRGTKKMVKAMIEQFDSIPKKEGEPIILVELENEDIYL 240
Query: 239 EMKESLQ----PYVKKPISVLETGSIIQTHTGENAWAVL 273
+KE L+ Y+K P+ G + H+G A+
Sbjct: 241 PIKEYLENNNIEYLKLPL-----GCSVAIHSGPKVCALF 274
>gi|153940838|ref|YP_001389581.1| DegV family protein [Clostridium botulinum F str. Langeland]
gi|152936734|gb|ABS42232.1| DegV family protein [Clostridium botulinum F str. Langeland]
Length = 279
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 2/207 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + ++ ++ DI ++PL V VY D D++ + ++ P
Sbjct: 1 MEKIKIITDSTADLPKDIIEKYDIEVIPLFVSFGDKVYKDGVDIKLEQLFTKIEKENVFP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-VTVVDSSFI 118
+TSQ F + + + + G IISIH+S +SGT ++A + ++D +TV+DS+ +
Sbjct: 61 QTSQVNPQRFYEHYKKYIDKGYSIISIHISSKMSGTYQSACLAKDMLDSDNITVIDSNNV 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ V +A KL EG +EEI+ ++E + + TL+ LVKGGR+ + +G I
Sbjct: 121 TSGLGLLVIKACKLKDEGLSMEEIVKGVKETIPHIKSVLAFETLDYLVKGGRLSKTAGFI 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAK 205
++L I+ I+ +++ ++ K RG+K
Sbjct: 181 GNVLGIKPILAVENGEMVVKDKVRGSK 207
>gi|148378221|ref|YP_001252762.1| hypothetical protein CBO0218 [Clostridium botulinum A str. ATCC
3502]
gi|148287705|emb|CAL81770.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
3502]
Length = 279
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 2/207 (0%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + ++ ++ DI ++PL V VY D D++ + ++ P
Sbjct: 1 MEKIKIITDSTADLPKDIIEKYDIEVIPLFVSFGDKVYKDGVDIKLEQLFTKIEKENVFP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-VTVVDSSFI 118
+TSQ F + + + + G IISIH+S +SGT ++A + ++D +TV+DS+ +
Sbjct: 61 QTSQVNPQRFYEHYKKYIDKGYSIISIHISSKMSGTYQSACLAKDMLDSDNITVIDSNNV 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ V +A KL EG +EEI+ ++E + + TL+ LVKGGR+ + +G I
Sbjct: 121 TSGLGLLVIKACKLKDEGLSMEEIVKGVKETIPHIKSVLAFETLDYLVKGGRLSKTAGFI 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAK 205
++L I+ I+ +++ ++ K RG+K
Sbjct: 181 GNVLGIKPILAVENGEMVVKDKVRGSK 207
>gi|110800233|ref|YP_695960.1| degV family protein [Clostridium perfringens ATCC 13124]
gi|110674880|gb|ABG83867.1| degV family protein [Clostridium perfringens ATCC 13124]
Length = 279
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 73/279 (26%), Positives = 142/279 (50%), Gaps = 11/279 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E+ ++ DI ++P+ + Y D +++ + ++ LP
Sbjct: 1 MDKIKIITDSTCDLSKEIIEKYDIDVMPMLINFGEESYLDGVEIKVDSMMERIEREDTLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-RQGATLANADVTVVDSSFI 118
T+Q F + + E+G ++ISIH+S +SGT ++A A L + D+ V+DS +
Sbjct: 61 TTAQIVPTRFIEKYKGYLEEGYKVISIHISSNMSGTYQSACLAKAELESDDIVVIDSRNV 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ V +AA+L + G LE++ +I E + + I +L+NLV+GGR+ + L
Sbjct: 121 TVGLGLIVLKAARLIESGITLEDLEKEILEYRNHIKSTIAFESLDNLVRGGRLSKGKALF 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
+ L I++++ + D ++ K RG K K + + ++ K+ + + + ++
Sbjct: 181 VNALGIKLMLNVLDGEMNVQGKIRGTKKMVKAMIEQFDSIPKKEGEPIILVELENEDIYL 240
Query: 239 EMKESLQ----PYVKKPISVLETGSIIQTHTGENAWAVL 273
+KE L+ Y+K P+ G + H+G A+
Sbjct: 241 PIKEYLENNNIEYLKLPL-----GCSVAIHSGPKVCALF 274
>gi|24379351|ref|NP_721306.1| hypothetical protein SMU.899 [Streptococcus mutans UA159]
gi|24377277|gb|AAN58612.1|AE014931_5 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 281
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 74/274 (27%), Positives = 137/274 (50%), Gaps = 4/274 (1%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
K+ ++TDSSV + + + D+ I+ + + +DG Y + +L EF M +S+ LPKT
Sbjct: 2 KLAVITDSSVYLPQDFVQREDLFILDIDITIDGKTYIEGKNLSLDEFYTKMAASKELPKT 61
Query: 62 SQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQG-ATLANADVTVVDSSFID 119
SQP + D+ L E+ +I + +S +SG + + A ++ D+
Sbjct: 62 SQPNLAELDDLLTNLEEEAYTHVIGLFLSGGISGFHQNIQYLIAEHDKLEIAFPDTKITS 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
M V EA K +E E+I+ ++ + +KT +I + L +LVKGGR+ S L+
Sbjct: 122 SPMGLMVMEALKWGREEIAFEQILVNLQVMIDKTNAFIMVDDLNHLVKGGRLSNGSALLG 181
Query: 180 SLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQE 239
+LL+I+ I+ + ++E K R K K L + + + I +A + A++
Sbjct: 182 NLLSIKPILYFTNGRIEVFEKVRTEKKAIKRLISIIDEVTADGSYMVYIIHANARGKAED 241
Query: 240 MKESLQPY-VKKPISVLETGSIIQTHTGENAWAV 272
+++ L + K ++++ +I TH GE A A+
Sbjct: 242 LQKRLVDHGYTKNLAIVPFNGVIATHLGEGAIAL 275
>gi|110801848|ref|YP_698629.1| degV family protein [Clostridium perfringens SM101]
gi|110682349|gb|ABG85719.1| degV family protein [Clostridium perfringens SM101]
Length = 279
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 74/279 (26%), Positives = 142/279 (50%), Gaps = 11/279 (3%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLP 59
M KIKI+TDS+ + E+ ++ DI ++P+ + Y D +++ + ++ LP
Sbjct: 1 MDKIKIITDSTCDLSKEIIEKYDIDVMPMLINFGEESYLDGVEIKVDSMMERIEREDLLP 60
Query: 60 KTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAA-RQGATLANADVTVVDSSFI 118
T+Q F + + E+G ++ISIH+S +SGT ++A A L + D+ V+DS +
Sbjct: 61 TTAQIVPTRFIEKYKGYLEEGYKVISIHISSNMSGTYQSACLAKAELESDDIVVIDSRNV 120
Query: 119 DQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLI 178
+ V +AA+L + G LE++ +I E + + I +L+NLV+GGR+ + L
Sbjct: 121 TVGLGLIVLKAARLIESGITLEDLEKEILEYRNHIKSTIAFESLDNLVRGGRLSKGKALF 180
Query: 179 SSLLNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
S L I++++ + D ++ K RG K K + + ++ K+ + + + ++
Sbjct: 181 VSALGIKLMLNVLDGEMNVQGKIRGTKKMVKAMIEQFDSIPKKEGEPIILVELENEDIYL 240
Query: 239 EMKESLQ----PYVKKPISVLETGSIIQTHTGENAWAVL 273
+KE L+ Y+K P+ G + H+G A+
Sbjct: 241 PIKEYLENNNIEYLKLPL-----GCSVAIHSGPKVCALF 274
>gi|125718825|ref|YP_001035958.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
gi|125498742|gb|ABN45408.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
Length = 287
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 139/272 (51%), Gaps = 13/272 (4%)
Query: 5 KIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD---ADLEEGEFLRLMQSSRNLPKT 61
KI+TDS+ + +E D+ ++ L++ +DG + L E L M+S P T
Sbjct: 4 KILTDSTADLPENWTQENDVHVLGLTIQLDGETHETVGAGKLTSQELLDKMESGSK-PTT 62
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLA-----NADVTVVDSS 116
SQ VG F DVF A++ ++ + + ALSGT ++A + +A + ++D+
Sbjct: 63 SQINVGQFEDVFRSYAKEETPVLYVAFASALSGTYQSAVMAREIVLEDFPDALIRIIDTK 122
Query: 117 FIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSG 176
V +AA+ G LE+ IE + K + Y + L +L++GGRI + +
Sbjct: 123 AASMGEGLLVMKAAEARAAGQTLEQTADLIESLVPKVKTYFLVDDLNHLMRGGRISKTAA 182
Query: 177 LISSLLNIRVIMQMK-DHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPE 235
L+ SL+NI+ I+ ++ D L+ + K RG K K + + L+ + I+YAG+ E
Sbjct: 183 LMGSLVNIKPIIAVRGDGTLDSVAKVRGKK--KAQAEVVRMTLEGVADPRVVIAYAGAKE 240
Query: 236 LAQEMK-ESLQPYVKKPISVLETGSIIQTHTG 266
+A+ +K + L+ + + ++ G +I THTG
Sbjct: 241 IAESLKAQLLESDQVEEVLLMPLGPVISTHTG 272
>gi|119716117|ref|YP_923082.1| degV family protein [Nocardioides sp. JS614]
gi|119536778|gb|ABL81395.1| degV family protein [Nocardioides sp. JS614]
Length = 284
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 76/278 (27%), Positives = 140/278 (50%), Gaps = 7/278 (2%)
Query: 4 IKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD-ADLEEGEFLRLMQSSRNLPKTS 62
+ IVTDS+ ++ PEVA E + +VPL V++ VY + AD E + TS
Sbjct: 3 VVIVTDSTASLPPEVAAERGVRVVPLQVVIGATVYDEGADGATPELVAAALKDWLPVSTS 62
Query: 63 QPPVGVFADVFDRLAEDGA-QIISIHMSHALSGTVEAARQGATLANADVTVVDSSFIDQA 121
+P +V+++ A DGA +++SIH+S +SGT E+A+ A A+ V VD+ + A
Sbjct: 63 RPGPAALLEVYEQAARDGATEVVSIHLSGQMSGTFESAQLAARDASIPVLPVDTRQVGVA 122
Query: 122 MKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLISSL 181
+ V AA + G D E E + + TLE L +GGRIG+ + L+
Sbjct: 123 TGYAVLAAADVLDAGGDAEAAAEAARARAELSASLFYVDTLEYLRRGGRIGKAAALLGGA 182
Query: 182 LNIRVIMQMKDHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQEMK 241
L+++ ++Q++D + + + R + L++L+ + ++ +++ +PE A ++
Sbjct: 183 LSVKPLLQIEDGVVASLERVRTSARALARLEELAVLAAGEVPVDVSVAHLANPERAGQLA 242
Query: 242 ESLQPYVK-----KPISVLETGSIIQTHTGENAWAVLI 274
E L ++ + + E G+++ H G AV +
Sbjct: 243 ERLAHRLEANLEGREVWCGELGAVLGAHVGPGMIAVCV 280
>gi|18309008|ref|NP_560942.1| hypothetical protein CPE0026 [Clostridium perfringens str. 13]
gi|30179757|sp|Q8XPD7|Y026_CLOPE UPF0230 protein CPE0026
gi|18143683|dbj|BAB79732.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 291
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 81/284 (28%), Positives = 137/284 (48%), Gaps = 12/284 (4%)
Query: 1 MTKIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSD---ADLEEGEFLRLMQSSRN 57
M K I TDS+ + + K+LDI + L +D Y D ++L F ++
Sbjct: 1 MKKFVIFTDSAADLPKSMVKDLDINYLGLICNIDNTEYIDNIDSELTPKAFYNKLREGI- 59
Query: 58 LPKTSQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEA---ARQG--ATLANADVTV 112
+P TSQ F + F+ + G I+ + S ALSGT + AR+ +AD+ +
Sbjct: 60 MPSTSQVNSFRFVEAFEEYVKQGISILYLAFSSALSGTYNSSLIAREELLEKYPDADIKI 119
Query: 113 VDSSFIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIG 172
VD+ V AA++ K+G ++EI + +EE K K Y + +L++L +GGRI
Sbjct: 120 VDTRAACLGQGLLVYYAAQMKKDGKSIDEIYSWVEENKNKLCHYFTVDSLDHLKRGGRIS 179
Query: 173 RVSGLISSLLNIRVIMQMKDH-QLEPIVKGRG-AKTFKKWLDDLSANLQNKQVAELGISY 230
+ I SLL+I+ ++ + D +L K +G K+ K +L + N + I++
Sbjct: 180 STAAAIGSLLSIKPMLYVNDAGELHNFAKAKGRKKSLKMLFQELEKRIVNPNEQTIFIAH 239
Query: 231 AGSPELAQEMKESL-QPYVKKPISVLETGSIIQTHTGENAWAVL 273
+ E A+ + E + + Y K I + G +I +HTG AV
Sbjct: 240 SDCVEDAETLAEMIREKYPVKDILIDYIGIVIGSHTGIGTLAVF 283
>gi|157076026|gb|ABV10709.1| DegV family fatty acid binding protein [Streptococcus gordonii str.
Challis substr. CH1]
Length = 287
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 81/279 (29%), Positives = 138/279 (49%), Gaps = 13/279 (4%)
Query: 5 KIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYS---DADLEEGEFLRLMQSSRNLPKT 61
KI+TDS+ + + A E D+TI+ L++ +DGV Y + L L M++ P T
Sbjct: 4 KILTDSTTDLSEKWAAEHDVTILGLTIQLDGVTYETVGENKLTSRTLLEKMKAGIQ-PTT 62
Query: 62 SQPPVGVFADVFDRLAEDGAQIISIHMSHALSGTVEAARQGATLANAD-----VTVVDSS 116
SQ VG F DVF A+ G ++ + + LSGT ++A + D + +++S
Sbjct: 63 SQINVGQFEDVFREYAKAGTPLLYVAFASLLSGTYQSAVMARDIVLEDYPQAVIEILESR 122
Query: 117 FIDQAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSG 176
V +A + EG L E + + ++ K + Y + L +LV+GGRI + +
Sbjct: 123 AASMGEGLLVMKAVEARSEGKSLAETLDILLALRPKVQTYFLVDDLNHLVRGGRISKTAA 182
Query: 177 LISSLLNIRVIMQMK-DHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPE 235
+I SL +I+ I+ ++ D L+PI K RG K K + + L+N I++A + +
Sbjct: 183 MIGSLASIKPIIAVQADGSLKPIAKVRGKK--KAQAECVRMLLENIADGRAVIAHADADQ 240
Query: 236 LAQEMKESLQPYVK-KPISVLETGSIIQTHTGENAWAVL 273
A+ +KE L + K + + G +I TH G A+
Sbjct: 241 DAENLKEQLLADGRVKEVLIEPLGPVIATHVGPGTLALF 279
>gi|81096797|ref|ZP_00875127.1| DegV [Streptococcus suis 89/1591]
gi|80977149|gb|EAP40702.1| DegV [Streptococcus suis 89/1591]
Length = 283
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 5/274 (1%)
Query: 3 KIKIVTDSSVTIEPEVAKELDITIVPLSVMVDGVVYSDA-DLEEGEFLRLMQSSRNLPKT 61
K+ ++TDSS + + + D+ ++ + V +DG Y + +L EF + M SS+ LPKT
Sbjct: 2 KLAVITDSSAILNVQSIERDDLFVLSIPVSIDGENYIEGQNLTVEEFYQKMASSKELPKT 61
Query: 62 SQPPVGVFADVFDRLAEDG-AQIISIHMSHALSGTVEAARQGA-TLANADVTVVDSSFID 119
SQP + ++ +L E G + + +S +SG + + A V D+
Sbjct: 62 SQPSLMELEEILAKLTEKGYTHALGLFLSSGISGFYQNIQYLADEFEGLTVAFPDTKITS 121
Query: 120 QAMKFQVTEAAKLAKEGADLEEIIAKIEEVKEKTELYIGLSTLENLVKGGRIGRVSGLIS 179
+ V K A G EEI K+++ KT +I + L +LVKGGR+ + L+
Sbjct: 122 APLGMMVENVLKWADAGLSFEEITGKLDQEIGKTTAFIMVDDLNHLVKGGRLSNGAALLG 181
Query: 180 SLLNIRVIMQMK-DHQLEPIVKGRGAKTFKKWLDDLSANLQNKQVAELGISYAGSPELAQ 238
+LL+I+ I+ + ++E K R K K L ++ + ++ I +A +P+ A+
Sbjct: 182 NLLSIKPILYFTGEGKIEVYEKVRTEKKAIKRLLEILQEQTTEGQYQIAIIHANAPQKAE 241
Query: 239 EMKESLQPY-VKKPISVLETGSIIQTHTGENAWA 271
K+ L+ V + ++ GS+I TH GE A A
Sbjct: 242 NFKQQLEEAGVGSDLPIVSFGSVIGTHLGEGAVA 275
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.314 0.131 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 909,398,383
Number of Sequences: 5470121
Number of extensions: 35120422
Number of successful extensions: 98673
Number of sequences better than 1.0e-05: 500
Number of HSP's better than 0.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 272
Number of HSP's that attempted gapping in prelim test: 97539
Number of HSP's gapped (non-prelim): 536
length of query: 277
length of database: 1,894,087,724
effective HSP length: 131
effective length of query: 146
effective length of database: 1,177,501,873
effective search space: 171915273458
effective search space used: 171915273458
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 129 (54.3 bits)