VISTAL--a new 2D visualization tool of protein 3D ...[Bioinformatics. 2006]

SearchDatabase nameforSearch term

Advanced Search

Your browser version may not work well with NCBI's Web applications. More information here...

Display Show

All: 1

Review: 0

Click to change filter selection through MyNCBI.

1: Bioinformatics. 2006 Sep 1;22(17):2166-7. Epub 2006 Jul 12. Links

VISTAL--a new 2D visualization tool of protein 3D structural alignments.

Kolodny R, Honig B.

Howard Hughes Medical Institute, Department of Biochemistry and Molecular Biophysics, Center for Computational Biology and Bioinformatics, Columbia University, 1130 St Nicholas Avenue, Room 815, New York, NY 10032, USA.

We offer a tool, denoted VISTAL, for two-dimensional visualization of protein structural alignments. VISTAL describes aligned structures as a series of matched secondary structure elements, colored according to the three-dimensional distance of their Calpha atoms. AVAILABILITY: VISTAL can be downloaded from http://trantor.bioc.columbia.edu/~kolodny/software.html.

PMID: 16837525 [PubMed - indexed for MEDLINE]

MAGOS: multiple alignment and modelling server. [Bioinformatics. 2006]
ViTO: tool for refinement of protein sequence-structure alignments. [Bioinformatics. 2004]
THESEUS: maximum likelihood superpositioning and analysis of macromolecular structures. [Bioinformatics. 2006]
ReviewHigh-throughput modeling and analysis of protein structural dynamics. [Brief Bioinform. 2007]
ReviewFive hierarchical levels of sequence-structure correlation in proteins. [Appl Bioinformatics. 2004]

Recent Activity

Clear Turn Off

VISTAL--a new 2D visualization tool of protein 3D structural alignments.VISTAL--a new 2D visualization tool of protein 3D structural alignments.

Display Show

VISTAL--a new 2D visualization tool of protein 3D structural alignments.

Related Articles

Recent Activity