R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|7487070|pir||T04747 hypothetical protein T16H5.20 - Arabidopsis thaliana
>gi|3250675|emb|CAA19683.1| (AL024486) putative protein
[Arabidopsis thaliana] >gi|7268762|emb|CAB78968.1| (AL161551)
putative protein [Arabidopsis thaliana]
Length = 601
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | || 601
0 150 300 450 600
Plus Strand HSPs:
Score = 495 (174.2 bits), Expect = 2.6e-46, P = 2.6e-46
Identities = 94/132 (71%), Positives = 114/132 (86%), Frame = +3
Query: 6 PFSVHRCILASRSKFFHELFKREKGSSEKEGKLKYNMNDLLPYGKVGYEAFLIFLGYVYT 185
P SVHRC+LA+RSKFF +LFK++K SSEK K KY M DLLPYG VG EAFL FL Y+YT
Sbjct: 66 PVSVHRCVLAARSKFFLDLFKKDKDSSEK--KPKYQMKDLLPYGNVGREAFLHFLSYIYT 123
Query: 186 GKLKPSPMEVSTCVDNVCAHDACRPAINFAVELMYASSIFQIPELVSLFQRRLLNFIGKA 365
G+LKP P+EVSTCVD+VCAHD+C+PAI+FAVELMYAS +FQIP+LVS FQR+L N++ K+
Sbjct: 124 GRLKPFPIEVSTCVDSVCAHDSCKPAIDFAVELMYASFVFQIPDLVSSFQRKLRNYVEKS 183
Query: 366 LVEDVIPILTVA 401
LVE+V+PIL VA
Sbjct: 184 LVENVLPILLVA 195
>gi|9758986|dbj|BAB09496.1| (AB019224) regulatory protein NPR1-like;
transcription factor inhibitor I kappa B-like [Arabidopsis
thaliana]
Length = 593
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | 593
0 150 300 450
Plus Strand HSPs:
Score = 478 (168.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 90/140 (64%), Positives = 112/140 (80%), Frame = +3
Query: 6 PFSVHRCILASRSKFFHELFKREKGSSEKEGKLKYNMNDLLPYGKVGYEAFLIFLGYVYT 185
P VHRCILA+RSKFF +LFK+EK S+ E K KY + ++LPYG V +EAFL FL Y+YT
Sbjct: 70 PVGVHRCILAARSKFFQDLFKKEKKISKTE-KPKYQLREMLPYGAVAHEAFLYFLSYIYT 128
Query: 186 GKLKPSPMEVSTCVDNVCAHDACRPAINFAVELMYASSIFQIPELVSLFQRRLLNFIGKA 365
G+LKP P+EVSTCVD VC+HD CRPAI+F V+LMYASS+ Q+PELVS FQRRL NF+ K
Sbjct: 129 GRLKPFPLEVSTCVDPVCSHDCCRPAIDFVVQLMYASSVLQVPELVSSFQRRLCNFVEKT 188
Query: 366 LVEDVIPILTVAMSSQSSLL 425
LVE+V+PIL VA + + + L
Sbjct: 189 LVENVLPILMVAFNCKLTQL 208
>gi|1773295|gb|AAC49611.1| (U76707) regulatory protein NPR1 [Arabidopsis
thaliana] >gi|1916912|gb|AAB58262.1| (U87794) transcription factor
inhibitor I kappa B homolog [Arabidopsis thaliana]
>gi|12323466|gb|AAG51705.1|AC066689_4 (AC066689) transcription
factor inhibitor I kappa B, putative; 88267-90345 [Arabidopsis
thaliana]
Length = 593
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 593
0 150 300 450
Plus Strand HSPs:
Score = 285 (100.3 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 53/132 (40%), Positives = 87/132 (65%), Frame = +3
Query: 12 SVHRCILASRSKFFHELF---KREKGSSEKEGKLKYNMNDLLPYGKVGYEAFLIFLGYVY 182
S HRC+L++RS FF K+EK S+ +K + ++ +VG+++ + L YVY
Sbjct: 78 SFHRCVLSARSSFFKSALAAAKKEKDSNNTAA-VKLELKEIAKDYEVGFDSVVTVLAYVY 136
Query: 183 TGKLKPSPMEVSTCVDNVCAHDACRPAINFAVELMYASSIFQIPELVSLFQRRLLNFIGK 362
+ +++P P VS C D C H ACRPA++F +E++Y + IF+IPEL++L+QR LL+ + K
Sbjct: 137 SSRVRPPPKGVSECADENCCHVACRPAVDFMLEVLYLAFIFKIPELITLYQRHLLDVVDK 196
Query: 363 ALVEDVIPILTVA 401
++ED + IL +A
Sbjct: 197 VVIEDTLVILKLA 209
>gi|9988453|dbj|BAB12719.1| (AP002746) putative regulatory protein NPR1 [Oryza
sativa] >gi|10934082|dbj|BAB16860.1| (AP002537) Arabidopsis
thaliana regulatory protein NPR1 like protein [Oryza sativa]
Length = 582
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 582
0 150 300 450
Plus Strand HSPs:
Score = 260 (91.5 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 54/137 (39%), Positives = 84/137 (61%), Frame = +3
Query: 15 VHRCILASRSKFFHELFKREK----GSSEKEGKLKYNMNDLLPYG----KVGYEAFLIFL 170
VHRC+L++RS F +F R G ++G + + +LL G +VGYEA + L
Sbjct: 73 VHRCVLSARSPFLRGVFARRAAAAAGGGGEDGGERLELRELLGGGGEEVEVGYEALRLVL 132
Query: 171 GYVYTGKLKPSPMEVSTCVDNVCAHDACRPAINFAVELMYASSIFQIPELVSLFQRRLLN 350
Y+Y+G++ P CVD CAH C PA+ F ++++A+S FQ+ EL +LFQRRLL+
Sbjct: 133 DYLYSGRVGDLPKAACLCVDEDCAHVGCHPAVAFMAQVLFAASTFQVAELTNLFQRRLLD 192
Query: 351 FIGKALVEDVIPILTVA 401
+ K V++++ IL+VA
Sbjct: 193 VLDKVEVDNLLLILSVA 209
>gi|7487977|pir||T04267 NPR1 protein homolog F20B18.230 - Arabidopsis thaliana
>gi|4538941|emb|CAB39677.1| (AL049483) NPR1 like protein
[Arabidopsis thaliana] >gi|7269463|emb|CAB79467.1| (AL161564) NPR1
like protein [Arabidopsis thaliana]
Length = 600
Frame 3 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 600
0 150 300 450
Plus Strand HSPs:
Score = 244 (85.9 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 51/126 (40%), Positives = 80/126 (63%), Frame = +3
Query: 12 SVHRCILASRSKFFHELF---KREKGSSEKEGKLKYNMNDLLPYGKVGYEAFLIFLGYVY 182
S HRCIL++R F K +K S+ + +LK D Y +VG+++ + L YVY
Sbjct: 80 SFHRCILSARIPVFKSALATVKEQKSSTTVKLQLKEIARD---Y-EVGFDSVVAVLAYVY 135
Query: 183 TGKLKPSPMEVSTCVDNVCAHDACRPAINFAVELMYASSIFQIPELVSLFQRRLLNFIGK 362
+G+++ P S CVD+ C H ACR ++F VE++Y S +FQI ELV+L++R+ L + K
Sbjct: 136 SGRVRSPPKGASACVDDDCCHVACRSKVDFMVEVLYLSFVFQIQELVTLYERQFLEIVDK 195
Query: 363 ALVEDVIPI 389
+VED++ I
Sbjct: 196 VVVEDILVI 204
>gi|11357616|pir||T47773 hypothetical protein F24I3.210 - Arabidopsis thaliana
>gi|6911883|emb|CAB72183.1| (AL138655) putative protein
[Arabidopsis thaliana]
Length = 467
Frame 3 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | 467
0 150 300 450
Plus Strand HSPs:
Score = 191 (67.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 46/142 (32%), Positives = 75/142 (52%), Frame = +3
Query: 18 HRCILASRSKFFHELFKR--------EKGSSEKEGKLKYNMNDLLPYGKVGYEAFLIFLG 173
HRCILA+RS FF + F E + G + ++P VGYE FL+ L
Sbjct: 41 HRCILAARSLFFRKFFCESDPSQPGAEPANQTGSGARAAAVGGVIPVNSVGYEVFLLLLQ 100
Query: 174 YVYTGKLK--PSPMEV-STCVDNVCAHDACRPAINFAVELMYASSIFQIPELVSLFQRRL 344
++Y+G++ P E S C D C H C A++ +++++ A+ F + +L L Q+ L
Sbjct: 101 FLYSGQVSIVPHKHEPRSNCGDRGCWHTHCTAAVDLSLDILAAARYFGVEQLALLTQKHL 160
Query: 345 LNFIGKALVEDVIPILTVAMSSQ 413
+ + KA +EDV+ +L +A Q
Sbjct: 161 TSMVEKASIEDVMKVL-IASRKQ 182
>gi|3894187|gb|AAC78536.1| (AC005662) hypothetical protein [Arabidopsis
thaliana]
Length = 491
Frame 3 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | 491
0 150 300 450
Plus Strand HSPs:
Score = 154 (54.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 32/99 (32%), Positives = 57/99 (57%), Frame = +3
Query: 123 LLPYGKVGYEAFLIFLGYVYTGKLKPSPMEVS---TCVDNVCAHDACRPAINFAVELMYA 293
++P VGYE FL+ L ++Y+G++ P + C + C H C A++ A++ + A
Sbjct: 89 IIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCSAAVDLALDTLAA 148
Query: 294 SSIFQIPELVSLFQRRLLNFIGKALVEDVIPILTVAMSSQ 413
S F + +L L Q++L + + KA +EDV+ +L +A Q
Sbjct: 149 SRYFGVEQLALLTQKQLASMVEKASIEDVMKVL-IASRKQ 187
Score = 84 (29.6 bits), Expect = 2.8, P = 0.94
Identities = 24/79 (30%), Positives = 39/79 (49%), Frame = +3
Query: 18 HRCILASRSKFFHELF------KREKG-SSEKEGKLKYNMN-------DLLPYGKVGYEA 155
HRCILA+RS FF + F + G + G + + ++P VGYE
Sbjct: 40 HRCILAARSLFFRKFFCGTDSPQPVTGIDPTQHGSVPASPTRGSTAPAGIIPVNSVGYEV 99
Query: 156 FLIFLGYVYTGKLKPSPME 212
FL+ L ++Y+G++ P +
Sbjct: 100 FLLLLQFLYSGQVSIVPQK 118
>gi|4507183 ref|NP_003554.1| speckle-type POZ protein [Homo sapiens]
>gi|11434423 ref|XP_008436.1| speckle-type POZ protein [Homo
sapiens] >gi|8134708|sp|O43791|SPOP_HUMAN SPECKLE-TYPE POZ PROTEIN
>gi|2695708|emb|CAA04199.1| (AJ000644) SPOP [Homo sapiens]
>gi|12654851|gb|AAH01269.1|AAH01269 (BC001269) speckle-type POZ
protein [Homo sapiens]
Length = 374
Frame 3 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 374
0 150 300
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 3.4, P = 0.97
Identities = 21/61 (34%), Positives = 32/61 (52%), Frame = +3
Query: 9 FSVHRCILASRSKFFHELFKREKGSSEKEGKLKYNMNDLLPYGKVGYEAFLIFLGYVYTG 188
F H+ ILA+RS F +F+ E S+K + +ND+ P E F + ++YTG
Sbjct: 211 FQAHKAILAARSPVFSAMFEHEMEESKKN---RVEINDVEP------EVFKEMMCFIYTG 261
Query: 189 K 191
K
Sbjct: 262 K 262
>gi|9964427 ref|NP_064895.1| AMV113 [Amsacta moorei entomopoxvirus]
>gi|9944636|gb|AAG02819.1|AF250284_113 (AF250284) AMV113 [Amsacta
moorei entomopoxvirus]
Length = 67
Frame 1 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | 67
0 20 40 60
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 3.4, P = 0.97
Identities = 18/53 (33%), Positives = 27/53 (50%), Frame = +1
Query: 127 CLMARLDMKPSSYSLAMYILVNSSPLQWRCLLVLTM--FVLMMRVDLPLTLLL 279
C A L S+ ++I +NSS L CL+V++ +L+ LTLLL
Sbjct: 3 CFSANLSNFIFCSSILLFICINSSILSSFCLIVISFSSIILVYLFSTSLTLLL 55
>gi|11359861|pir||JC7326 bood POZ containing protein - human
Length = 478
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | 478
0 150 300 450
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 3.5, P = 0.97
Identities = 25/73 (34%), Positives = 35/73 (47%), Frame = +3
Query: 6 PFSVHRCILASRSKFFHELFKRE-KGSSEKEGKLKYNMNDLLPYGKVGYEAFLIFLGYVY 182
PF VHRC+L +RS +F + + KG S +L + + AF L Y+Y
Sbjct: 125 PFRVHRCVLGARSAYFANMLDTKWKGKSVV----------VLRHPLINPVAFGALLQYLY 174
Query: 183 TGKLKPSPMEVSTC 224
TG+L VS C
Sbjct: 175 TGRLDIGVEHVSDC 188
>gi|6679309 ref|NP_032861.1| per-hexamer repeat gene 4 [Mus musculus]
>gi|141401|sp|P15974|PHX4_MOUSE PUTATIVE PER-HEXAMER REPEAT PROTEIN
4 >gi|90666|pir||S02186 hypothetical protein SP5 - mouse
>gi|4803702|emb|CAB42649.1| (X12806) ORF (AA 1 - 95) [Mus musculus]
Length = 95
Frame 2 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | | 95
0 20 40 60 80
Plus Strand HSPs:
Score = 65 (22.9 bits), Expect = 8.9, P = 1.0
Identities = 20/56 (35%), Positives = 30/56 (53%), Frame = +2
Query: 215 VYLC*QCLCS*CV*TC---H*LCC*VNVCLF-HFSNTRVGIT--FPET-ST*LYRKG 364
+Y+C CLC C C H LC V+VC + H T + + P++ ST L++ G
Sbjct: 4 IYVCGVCLCV-CFSVCMCVHVLCVYVHVCTYAHIWTTALHLRCLLPKSFSTLLFKAG 59
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.324 0.140 0.408
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.373 0.171 0.773
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.346 0.150 0.541
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.360 0.160 0.609
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.352 0.158 0.542
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.336 0.144 0.457
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 141 140 10. 73 3 12 22 0.12 33
30 0.11 36
+2 0 141 140 10. 73 3 12 22 0.12 33
30 0.11 36
+1 0 142 141 10. 73 3 12 22 0.12 33
30 0.11 36
-1 0 142 141 10. 73 3 12 22 0.12 33
30 0.11 36
-2 0 141 141 10. 73 3 12 22 0.12 33
30 0.11 36
-3 0 141 140 10. 73 3 12 22 0.12 33
30 0.11 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 11
No. of states in DFA: 596 (59 KB)
Total size of DFA: 186 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 143.98u 1.10s 145.08t Elapsed: 00:00:26
Total cpu time: 144.01u 1.12s 145.13t Elapsed: 00:00:27
Start: Wed Feb 6 14:17:39 2002 End: Wed Feb 6 14:18:06 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000